F371370

General Info

Members Datasets Scaffolds Average Seq Length
262 210 260 295

Family's Representative Sequence

Representative Sequence 3300048912|Ga0496109_0480965|Ga0496109_0480965_39_1079
Length 346
Sequence LKGARRVREAARENGTATTTVTASRADFHRPATALITRFIADHRGHRDGPDGLRWGVESICTQLTKLGVPIAPSTYYDQLDREPSRREVRDDELKEDIRRVHAANYGVYGARKVWLTLNREGIAVARCTVERLMAELGVAGAIRGTVKRTTIADSTAARPADLVQRRFGPPAPNRLWVADLTYVSTWSGLAYVAFVTDAYARRILGWRVASTMVTSMVLDAIEQAIWTRQQEGVLDLKDVVHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRTIEDVELATAKWVHWFNHRRLYEYCGDIPPAELEGAYYAQHRRPAAG

Samples

Sample ID Description Type Environment
1 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
2 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
3 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
4 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
5 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
6 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
41 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
42 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
45 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
70 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
71 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
101 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
104 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
105 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
116 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
117 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
118 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
119 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
120 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
121 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
122 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
123 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
124 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
125 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
128 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
129 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
130 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
131 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
132 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
133 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
134 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
135 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
136 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
137 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
138 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
139 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
140 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
141 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
142 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
143 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
144 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
145 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
146 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
147 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
148 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
149 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
150 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
151 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
152 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
153 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
154 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
155 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
156 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
157 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
158 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
159 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
160 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
161 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
162 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
163 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
164 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
165 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
166 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
177 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
178 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
179 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
180 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
181 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
182 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
183 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
184 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
185 3300049666 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A4_B_2_control Metagenome Rhizosphere
186 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
187 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
188 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
189 3300049676 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G12_A_3_control Metagenome Rhizosphere
190 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
191 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
192 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
193 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
194 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
195 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
196 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
197 3300049768 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_B_4_drought Metagenome Rhizosphere
198 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
199 3300049774 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_A_5_drought Metagenome Rhizosphere
200 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
201 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
202 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
203 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
204 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
205 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
206 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
207 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
208 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
209 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
210 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.24
Metatranscriptomes 0
Isolates 0.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.44
Nodule 0
Rhizoplane 8.02
Rhizosphere 87.02
Stem 0
Stem Tuber 0
Unclassified 1.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24738J21930_10012959 3300002075 Bacteria 1812
2 JGI24738J21930_10025324 3300002075 Bacteria 1219
3 JGI24744J21845_10018002 3300002077 Bacteria 1402
4 Ga0055530_10044983 3300003791 Bacteria 1055
5 Ga0055540_1026759 3300003792 Bacteria 1390
6 Ga0065165_1002594 3300005262 Bacteria 14828
7 Ga0065165_1037650 3300005262 Bacteria 1465
8 Ga0070670_100180734 3300005331 Bacteria 1832
9 Ga0068869_100325445 3300005334 Bacteria 1247
10 Ga0070666_10015941 3300005335 Bacteria 4800
11 Ga0068868_100018672 3300005338 Bacteria 5188
12 Ga0068868_100455425 3300005338 Bacteria 1113
13 Ga0070689_100472460 3300005340 Bacteria 1070
14 Ga0070668_100081493 3300005347 Bacteria 2537
15 Ga0070668_100251076 3300005347 Bacteria 1468
16 Ga0070668_100255635 3300005347 Bacteria 1455
17 Ga0070669_100244226 3300005353 Bacteria 1427
18 Ga0070669_100288971 3300005353 Bacteria 1316
19 Ga0070675_100314432 3300005354 Bacteria 1382
20 Ga0070659_100149396 3300005366 Bacteria 1905
21 Ga0070709_10145488 3300005434 Bacteria 1633
22 Ga0070711_100265439 3300005439 Bacteria 1352
23 Ga0070663_100164604 3300005455 Bacteria 1710
24 Ga0070678_100068544 3300005456 Bacteria 2645
25 Ga0070678_100371212 3300005456 Bacteria 1235
26 Ga0070662_100213187 3300005457 Bacteria 1538
27 Ga0070662_100220069 3300005457 Bacteria 1514
28 Ga0068853_100282779 3300005539 Bacteria 1529
29 Ga0070695_100156003 3300005545 Bacteria 1597
30 Ga0070695_100176840 3300005545 Bacteria 1509
31 Ga0070696_100188609 3300005546 Bacteria 1533
32 Ga0070693_100163008 3300005547 Bacteria 1421
33 Ga0070704_100006141 3300005549 Bacteria 7055
34 Ga0068855_100079288 3300005563 Bacteria 3809
35 Ga0070664_100059575 3300005564 Bacteria 3249
36 Ga0068857_100246078 3300005577 Bacteria 1638
37 Ga0068854_100211899 3300005578 Bacteria 1528
38 Ga0068854_100217913 3300005578 Bacteria 1509
39 Ga0068854_100278112 3300005578 Bacteria 1347
40 Ga0068852_100288723 3300005616 Bacteria 1584
41 Ga0068852_100391390 3300005616 Bacteria 1365
42 Ga0068859_100671548 3300005617 Bacteria 1128
43 Ga0068864_100347219 3300005618 Bacteria 1399
44 Ga0068866_10130512 3300005718 Bacteria 1428
45 Ga0068866_10177789 3300005718 Bacteria 1254
46 Ga0068861_100175311 3300005719 Bacteria 1780
47 Ga0068861_100274754 3300005719 Bacteria 1448
48 Ga0068858_100260105 3300005842 Bacteria 1649
49 Ga0068860_100349673 3300005843 Bacteria 1454
50 Ga0068860_100602020 3300005843 Bacteria 1104
51 Ga0068862_100150457 3300005844 Bacteria 2071
52 Ga0081455_10063775 3300005937 Bacteria 3090
53 Ga0081538_10032901 3300005981 Bacteria 3463
54 Ga0081540_1027794 3300005983 Bacteria 3195
55 Ga0081539_10051381 3300005985 Bacteria 2324
56 Ga0070717_10198164 3300006028 Bacteria 1758
57 Ga0070716_100084656 3300006173 Bacteria 1902
58 Ga0070712_100004695 3300006175 Bacteria 8446
59 Ga0070712_100197944 3300006175 Bacteria 1576
60 Ga0070712_100236763 3300006175 Bacteria 1452
61 Ga0075431_100373192 3300006847 Bacteria 1431
62 Ga0068865_100204904 3300006881 Bacteria 1533
63 Ga0068865_100235469 3300006881 Bacteria 1438
64 Ga0075436_100305055 3300006914 Bacteria 1142
65 Ga0097620_100671588 3300006931 Bacteria 1128
66 Ga0075435_100264306 3300007076 Bacteria 1466
67 Ga0105240_10429460 3300009093 Bacteria 1483
68 Ga0105245_10032851 3300009098 Bacteria 4596
69 Ga0105245_10180561 3300009098 Bacteria 2016
70 Ga0105245_10358162 3300009098 Bacteria 1447
71 Ga0105247_10045781 3300009101 Bacteria 2685
72 Ga0105241_10263017 3300009174 Bacteria 1467
73 Ga0105242_10309024 3300009176 Bacteria 1446
74 Ga0105248_10187554 3300009177 Bacteria 2330
75 Ga0105237_10412642 3300009545 Bacteria 1355
76 Ga0105238_10039550 3300009551 Bacteria 4782
77 Ga0105239_10178084 3300010375 Bacteria 2378
78 Ga0105239_10598486 3300010375 Bacteria 1257
79 Ga0105246_10317047 3300011119 Bacteria 1265
80 Ga0163162_10399752 3300013306 Bacteria 1506
81 Ga0157372_10347757 3300013307 Bacteria 1727
82 Ga0157372_10533530 3300013307 Bacteria 1368
83 Ga0157375_10622587 3300013308 Bacteria 1237
84 Ga0163163_10070192 3300014325 Bacteria 3489
85 Ga0163163_10153960 3300014325 Bacteria 2343
86 Ga0157377_10101347 3300014745 Bacteria 1716
87 Ga0157379_10294495 3300014968 Bacteria 1478
88 Ga0157376_10259691 3300014969 Bacteria 1627
89 Ga0163161_10313760 3300017792 Bacteria 1238
90 Ga0213873_10000773 3300021358 Bacteria 5183
91 Ga0213872_10071343 3300021361 Bacteria 1565
92 Ga0209050_1000529 3300025298 Bacteria 63410
93 Ga0209050_1001378 3300025298 Bacteria 26512
94 Ga0209051_1018321 3300025303 Bacteria 3101
95 Ga0207688_10031513 3300025901 Bacteria 2927
96 Ga0207688_10125596 3300025901 Bacteria 1500
97 Ga0207688_10155184 3300025901 Bacteria 1354
98 Ga0207695_10303836 3300025913 Bacteria 1487
99 Ga0207671_10056414 3300025914 Bacteria 2911
100 Ga0207693_10025948 3300025915 Bacteria 4642
101 Ga0207693_10317398 3300025915 Bacteria 1220
102 Ga0207646_10266381 3300025922 Bacteria 1549
103 Ga0207694_10159438 3300025924 Bacteria 1822
104 Ga0207687_10290973 3300025927 Bacteria 1313
105 Ga0207687_10317936 3300025927 Bacteria 1259
106 Ga0207706_10118025 3300025933 Bacteria 2333
107 Ga0207704_10171655 3300025938 Bacteria 1556
108 Ga0207665_10199989 3300025939 Bacteria 1455
109 Ga0207711_10360487 3300025941 Bacteria 1347
110 Ga0207661_10487001 3300025944 Bacteria 1126
111 Ga0207679_10425206 3300025945 Bacteria 1173
112 Ga0207667_10396063 3300025949 Bacteria 1406
113 Ga0207667_10635987 3300025949 Bacteria 1074
114 Ga0207712_10309386 3300025961 Bacteria 1300
115 Ga0207668_10175198 3300025972 Bacteria 1686
116 Ga0207668_10285886 3300025972 Bacteria 1354
117 Ga0207668_10317491 3300025972 Bacteria 1291
118 Ga0207677_10222977 3300026023 Bacteria 1513
119 Ga0207703_10297812 3300026035 Bacteria 1470
120 Ga0207639_10322144 3300026041 Bacteria 1373
121 Ga0207678_10242149 3300026067 Bacteria 1545
122 Ga0207676_10343869 3300026095 Bacteria 1377
123 Ga0207674_10325315 3300026116 Bacteria 1487
124 Ga0207675_100099569 3300026118 Bacteria 2738
125 Ga0207675_100199845 3300026118 Bacteria 1920
126 Ga0207675_100476941 3300026118 Bacteria 1239
127 Ga0207683_10026680 3300026121 Bacteria 4989
128 Ga0207698_10362500 3300026142 Bacteria 1373
129 Ga0268265_10240545 3300028380 Bacteria 1597
130 Ga0268264_10520971 3300028381 Bacteria 1162
131 Ga0316575_10124666 3300031665 Bacteria 1055
132 Ga0307405_10123738 3300031731 Bacteria 1774
133 Ga0307416_100014387 3300032002 Bacteria 5420
134 Ga0307416_100777603 3300032002 Bacteria 1052
135 Ga0373926_0001135 3300035083 Bacteria 7917
136 Ga0373933_0141488 3300035724 Bacteria 1519
137 Ga0373947_0000046 3300035725 Bacteria 60857
138 Ga0373937_0346646 3300036401 Bacteria 1406
139 Ga0316584_0212225 3300036712 Bacteria 1424
140 Ga0395899_0059304 3300037312 Bacteria 2821
141 Ga0395899_0203222 3300037312 Bacteria 1380
142 Ga0395900_0000378 3300037418 Bacteria 64374
143 Ga0395900_0136104 3300037418 Bacteria 2517
144 Ga0395900_0286793 3300037418 Bacteria 1636
145 Ga0395898_0321873 3300037466 Bacteria 1475
146 Ga0395905_0121989 3300037471 Bacteria 2450
147 Ga0436364_1025065 3300037853 Bacteria 1769
148 Ga0395901_0370072 3300038443 Bacteria 1476
149 Ga0395901_0372160 3300038443 Bacteria 1471
150 Ga0395901_0417105 3300038443 Bacteria 1377
151 Ga0436365_1330816 3300039437 Bacteria 3066
152 Ga0436361_0427118 3300039447 Bacteria 1486
153 Ga0436362_0075807 3300039453 Bacteria 8343
154 Ga0439444_0039101 3300042437 Bacteria 924
155 Ga0439440_0034302 3300042993 Bacteria 1213
156 Ga0466969_0065102 3300044656 Bacteria 1763
157 Ga0466965_0075893 3300044683 Bacteria 1695
158 Ga0466966_0127454 3300044684 Bacteria 1560
159 Ga0466963_0182237 3300044694 Bacteria 1466
160 Ga0466968_0174911 3300044735 Bacteria 996
161 Ga0466960_0089357 3300044901 Bacteria 1567
162 Ga0466959_0000227 3300045049 Bacteria 35440
163 Ga0466959_0194825 3300045049 Bacteria 1413
164 Ga0451576_0366721 3300045051 Bacteria 1508
165 Ga0466958_0171378 3300045836 Bacteria 1374
166 Ga0466967_0000565 3300045976 Bacteria 18171
167 Ga0466967_0092770 3300045976 Bacteria 2746
168 Ga0495603_0175458 3300046455 Bacteria 1241
169 Ga0495629_0180116 3300046459 Bacteria 1465
170 Ga0495653_0305393 3300046463 Bacteria 1036
171 Ga0495639_0054538 3300046475 Bacteria 1822
172 Ga0495662_0158706 3300046476 Bacteria 1114
173 Ga0495630_0207746 3300046517 Bacteria 1494
174 Ga0495665_0063288 3300046531 Bacteria 1953
175 Ga0495640_0159194 3300046533 Bacteria 1448
176 Ga0495667_0074171 3300046559 Bacteria 2215
177 Ga0495667_0216406 3300046559 Bacteria 1223
178 Ga0495634_0257089 3300046642 Bacteria 1067
179 Ga0495588_0079006 3300046674 Bacteria 1717
180 Ga0495657_0153538 3300046675 Bacteria 1428
181 Ga0495647_0054186 3300046681 Bacteria 1566
182 Ga0495624_0174679 3300046690 Bacteria 1310
183 Ga0495600_0159426 3300046809 Bacteria 1459
184 Ga0495674_0398442 3300047319 Bacteria 1111
185 Ga0495680_0177671 3300047322 Bacteria 1538
186 Ga0495680_0195721 3300047322 Bacteria 1452
187 Ga0495684_0185774 3300047471 Bacteria 1539
188 Ga0495686_0102607 3300047472 Bacteria 1723
189 Ga0495593_0086118 3300047673 Bacteria 1621
190 Ga0496100_0201908 3300048903 Bacteria 1449
191 Ga0496102_0021137 3300048905 Bacteria 5754
192 Ga0496102_0221441 3300048905 Bacteria 1784
193 Ga0496102_0228685 3300048905 Bacteria 1753
194 Ga0496102_0327317 3300048905 Bacteria 1443
195 Ga0496103_0010881 3300048906 Bacteria 5383
196 Ga0496103_0170972 3300048906 Bacteria 1395
197 Ga0496104_0153547 3300048907 Bacteria 2210
198 Ga0496105_0129270 3300048908 Bacteria 2083
199 Ga0496106_0267488 3300048909 Bacteria 1368
200 Ga0496108_0033297 3300048911 Bacteria 4281
201 Ga0496108_0064124 3300048911 Bacteria 3095
202 Ga0496109_0096395 3300048912 Bacteria 2740
203 Ga0496109_0465121 3300048912 Bacteria 1194
204 Ga0496109_0480965 3300048912 Bacteria 1172
205 Ga0496110_0013445 3300048913 Bacteria 6767
206 Ga0496111_0081883 3300048914 Bacteria 2356
207 Ga0496113_0182230 3300048916 Bacteria 1665
208 Ga0496114_0321370 3300048917 Bacteria 1367
209 Ga0496115_0259535 3300048918 Bacteria 1429
210 Ga0496115_0261098 3300048918 Bacteria 1424
211 Ga0501290_007435 3300049513 Bacteria 1372
212 Ga0501292_010030 3300049515 Bacteria 1412
213 Ga0501299_015598 3300049522 Bacteria 1336
214 Ga0501300_006115 3300049523 Bacteria 1775
215 Ga0501032_0146322 3300049569 Bacteria 1555
216 Ga0501033_0150575 3300049570 Bacteria 1678
217 Ga0501034_0003581 3300049571 Bacteria 17636
218 Ga0501036_0097979 3300049572 Bacteria 2479
219 Ga0501037_0108610 3300049573 Bacteria 1999
220 Ga0501040_0021843 3300049576 Bacteria 4279
221 Ga0501042_0045991 3300049578 Bacteria 3111
222 Ga0501046_0184085 3300049580 Bacteria 1560
223 Ga0501047_0089651 3300049581 Bacteria 2953
224 Ga0501048_0186862 3300049582 Bacteria 1468
225 Ga0501068_0199004 3300049584 Bacteria 1270
226 Ga0501069_0164776 3300049585 Bacteria 1277
227 Ga0501070_0244485 3300049586 Bacteria 1468
228 Ga0501071_0224742 3300049587 Bacteria 1413
229 Ga0501073_0175487 3300049589 Bacteria 1483
230 Ga0501076_0345573 3300049592 Bacteria 1221
231 Ga0501206_005862 3300049653 Bacteria 1588
232 Ga0501216_012087 3300049660 Bacteria 1412
233 Ga0501227_034739 3300049665 Bacteria 1224
234 Ga0501228_001691 3300049666 Bacteria 1645
235 Ga0501233_022257 3300049668 Bacteria 1367
236 Ga0501240_014254 3300049673 Bacteria 1114
237 Ga0501243_014293 3300049675 Bacteria 1266
238 Ga0501246_002180 3300049676 Bacteria 1540
239 Ga0501247_003147 3300049677 Bacteria 1755
240 Ga0501259_012037 3300049688 Bacteria 1438
241 Ga0501225_0036910 3300049705 Bacteria 1346
242 Ga0501234_011346 3300049707 Bacteria 1392
243 Ga0501079_0247891 3300049741 Bacteria 1392
244 Ga0501266_008560 3300049763 Bacteria 1288
245 Ga0501270_005702 3300049767 Bacteria 1459
246 Ga0501271_004239 3300049768 Bacteria 1352
247 Ga0501275_002851 3300049772 Bacteria 1586
248 Ga0501278_002203 3300049774 Bacteria 1369
249 Ga0501035_0204190 3300049822 Bacteria 1693
250 Ga0501044_0398308 3300049823 Bacteria 1289
251 Ga0501212_008828 3300049851 Bacteria 1408
252 nmdc:mga00v17_132245_c1 3300050491 Bacteria 1595
253 nmdc:mga0qj67_406230_c1 3300050509 Bacteria 1099
254 nmdc:mga06r32_304308_c1 3300050510 Bacteria 1580
255 nmdc:mga0rr50_147520_c1 3300050513 Bacteria 1898
256 Ga0495619_0137127 3300053085 Bacteria 1683
257 Ga0500622_0003904 3300053156 Bacteria 9652
258 Ga0501084_0209312 3300054114 Bacteria 1646
259 Ga0501082_0076294 3300060353 Bacteria 2889
260 Ga0501082_0120776 3300060353 Bacteria 2271

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005262 Ga0065165_1002594 Ga0065165_10025941 237
2 3300005937 Ga0081455_10063775 Ga0081455_100637753 237
3 3300046533 Ga0495640_0159194 Ga0495640_0159194_595_1356 251
4 3300046642 Ga0495634_0257089 Ga0495634_0257089_22_831 256
5 3300046455 Ga0495603_0175458 Ga0495603_0175458_348_1172 260
6 3300046459 Ga0495629_0180116 Ga0495629_0180116_107_931 260
7 3300046476 Ga0495662_0158706 Ga0495662_0158706_121_948 260
8 3300046559 Ga0495667_0074171 Ga0495667_0074171_500_1324 260
9 3300047322 Ga0495680_0195721 Ga0495680_0195721_122_946 260
10 3300049666 Ga0501228_001691 Ga0501228_001691_834_1628 261
11 3300042437 Ga0439444_0039101 Ga0439444_0039101_52_849 263
12 3300050491 nmdc:mga00v17_132245_c1 nmdc:mga00v17_132245_c1_125_964 264
13 3300037853 Ga0436364_1025065 Ga0436364_1025065_927_1733 267
14 3300002075 JGI24738J21930_10025324 JGI24738J21930_100253241 278
15 3300002077 JGI24744J21845_10018002 JGI24744J21845_100180021 278
16 3300005331 Ga0070670_100180734 Ga0070670_1001807342 278
17 3300005335 Ga0070666_10015941 Ga0070666_100159416 278
18 3300005338 Ga0068868_100018672 Ga0068868_1000186724 278
19 3300005347 Ga0070668_100081493 Ga0070668_1000814932 278
20 3300005347 Ga0070668_100255635 Ga0070668_1002556352 278
21 3300005353 Ga0070669_100288971 Ga0070669_1002889711 278
22 3300005455 Ga0070663_100164604 Ga0070663_1001646042 278
23 3300005456 Ga0070678_100371212 Ga0070678_1003712122 278
24 3300005457 Ga0070662_100213187 Ga0070662_1002131872 278
25 3300005539 Ga0068853_100282779 Ga0068853_1002827792 278
26 3300005545 Ga0070695_100156003 Ga0070695_1001560032 278
27 3300005549 Ga0070704_100006141 Ga0070704_1000061417 278
28 3300005563 Ga0068855_100079288 Ga0068855_1000792883 278
29 3300005577 Ga0068857_100246078 Ga0068857_1002460782 278
30 3300005578 Ga0068854_100217913 Ga0068854_1002179131 278
31 3300005578 Ga0068854_100278112 Ga0068854_1002781121 278
32 3300005616 Ga0068852_100288723 Ga0068852_1002887231 278
33 3300005616 Ga0068852_100391390 Ga0068852_1003913901 278
34 3300005617 Ga0068859_100671548 Ga0068859_1006715482 278
35 3300005618 Ga0068864_100347219 Ga0068864_1003472192 278
36 3300005718 Ga0068866_10177789 Ga0068866_101777891 278
37 3300005719 Ga0068861_100175311 Ga0068861_1001753113 278
38 3300005719 Ga0068861_100274754 Ga0068861_1002747541 278
39 3300005842 Ga0068858_100260105 Ga0068858_1002601052 278
40 3300005843 Ga0068860_100349673 Ga0068860_1003496733 278
41 3300006175 Ga0070712_100004695 Ga0070712_1000046956 278
42 3300006847 Ga0075431_100373192 Ga0075431_1003731921 278
43 3300006881 Ga0068865_100235469 Ga0068865_1002354691 278
44 3300006931 Ga0097620_100671588 Ga0097620_1006715882 278
45 3300009093 Ga0105240_10429460 Ga0105240_104294601 278
46 3300009098 Ga0105245_10032851 Ga0105245_100328512 278
47 3300009098 Ga0105245_10358162 Ga0105245_103581621 278
48 3300009101 Ga0105247_10045781 Ga0105247_100457812 278
49 3300009174 Ga0105241_10263017 Ga0105241_102630172 278
50 3300009176 Ga0105242_10309024 Ga0105242_103090241 278
51 3300009177 Ga0105248_10187554 Ga0105248_101875542 278
52 3300009545 Ga0105237_10412642 Ga0105237_104126422 278
53 3300009551 Ga0105238_10039550 Ga0105238_100395505 278
54 3300010375 Ga0105239_10598486 Ga0105239_105984862 278
55 3300013306 Ga0163162_10399752 Ga0163162_103997523 278
56 3300013307 Ga0157372_10533530 Ga0157372_105335302 278
57 3300013308 Ga0157375_10622587 Ga0157375_106225871 278
58 3300014968 Ga0157379_10294495 Ga0157379_102944952 278
59 3300017792 Ga0163161_10313760 Ga0163161_103137601 278
60 3300021358 Ga0213873_10000773 Ga0213873_100007738 278
61 3300025901 Ga0207688_10125596 Ga0207688_101255962 278
62 3300025901 Ga0207688_10155184 Ga0207688_101551842 278
63 3300025913 Ga0207695_10303836 Ga0207695_103038362 278
64 3300025914 Ga0207671_10056414 Ga0207671_100564143 278
65 3300025915 Ga0207693_10025948 Ga0207693_100259483 278
66 3300025924 Ga0207694_10159438 Ga0207694_101594382 278
67 3300025927 Ga0207687_10290973 Ga0207687_102909732 278
68 3300025927 Ga0207687_10317936 Ga0207687_103179362 278
69 3300025938 Ga0207704_10171655 Ga0207704_101716551 278
70 3300025941 Ga0207711_10360487 Ga0207711_103604871 278
71 3300025944 Ga0207661_10487001 Ga0207661_104870012 278
72 3300025945 Ga0207679_10425206 Ga0207679_104252061 278
73 3300025949 Ga0207667_10396063 Ga0207667_103960631 278
74 3300025961 Ga0207712_10309386 Ga0207712_103093862 278
75 3300025972 Ga0207668_10175198 Ga0207668_101751982 278
76 3300025972 Ga0207668_10317491 Ga0207668_103174911 278
77 3300026023 Ga0207677_10222977 Ga0207677_102229772 278
78 3300026035 Ga0207703_10297812 Ga0207703_102978122 278
79 3300026041 Ga0207639_10322144 Ga0207639_103221441 278
80 3300026067 Ga0207678_10242149 Ga0207678_102421492 278
81 3300026095 Ga0207676_10343869 Ga0207676_103438691 278
82 3300026116 Ga0207674_10325315 Ga0207674_103253151 278
83 3300026118 Ga0207675_100199845 Ga0207675_1001998453 278
84 3300026118 Ga0207675_100476941 Ga0207675_1004769411 278
85 3300026142 Ga0207698_10362500 Ga0207698_103625001 278
86 3300028380 Ga0268265_10240545 Ga0268265_102405452 278
87 3300047472 Ga0495686_0102607 Ga0495686_0102607_759_1595 278
88 3300048903 Ga0496100_0201908 Ga0496100_0201908_561_1397 278
89 3300048905 Ga0496102_0327317 Ga0496102_0327317_495_1331 278
90 3300048906 Ga0496103_0010881 Ga0496103_0010881_3942_4778 278
91 3300048918 Ga0496115_0259535 Ga0496115_0259535_459_1295 278
92 3300050509 nmdc:mga0qj67_406230_c1 nmdc:mga0qj67_406230_c1_55_891 278
93 3300050510 nmdc:mga06r32_304308_c1 nmdc:mga06r32_304308_c1_59_895 278
94 3300011119 Ga0105246_10317047 Ga0105246_103170471 280
95 3300014325 Ga0163163_10153960 Ga0163163_101539601 280
96 3300048911 Ga0496108_0064124 Ga0496108_0064124_1833_2675 280
97 iso_pu_bacteria 2643221592 2643969678 280
98 iso_pu_bacteria 2643221625 2644141261 280
99 3300044656 Ga0466969_0065102 Ga0466969_0065102_58_909 283
100 3300046463 Ga0495653_0305393 Ga0495653_0305393_25_882 283
101 3300048912 Ga0496109_0465121 Ga0496109_0465121_176_1120 284
102 3300039447 Ga0436361_0427118 Ga0436361_0427118_505_1407 286
103 3300039437 Ga0436365_1330816 Ga0436365_1330816_1338_2204 287
104 3300039453 Ga0436362_0075807 Ga0436362_0075807_4443_5309 287
105 3300005985 Ga0081539_10051381 Ga0081539_100513812 288
106 3300037312 Ga0395899_0059304 Ga0395899_0059304_1238_2128 289
107 3300037418 Ga0395900_0136104 Ga0395900_0136104_770_1660 289
108 3300044683 Ga0466965_0075893 Ga0466965_0075893_448_1332 289
109 3300044735 Ga0466968_0174911 Ga0466968_0174911_37_921 289
110 3300044901 Ga0466960_0089357 Ga0466960_0089357_274_1158 289
111 3300003791 Ga0055530_10044983 Ga0055530_100449831 291
112 3300003792 Ga0055540_1026759 Ga0055540_10267592 291
113 3300025298 Ga0209050_1001378 Ga0209050_100137814 291
114 3300025303 Ga0209051_1018321 Ga0209051_10183214 291
115 3300045051 Ga0451576_0366721 Ga0451576_0366721_405_1295 291
116 3300038443 Ga0395901_0417105 Ga0395901_0417105_80_973 292
117 3300049576 Ga0501040_0021843 Ga0501040_0021843_1883_2770 292
118 3300049587 Ga0501071_0224742 Ga0501071_0224742_111_998 292
119 3300049592 Ga0501076_0345573 Ga0501076_0345573_204_1091 292
120 3300049741 Ga0501079_0247891 Ga0501079_0247891_38_925 292
121 3300054114 Ga0501084_0209312 Ga0501084_0209312_543_1430 292
122 3300060353 Ga0501082_0120776 Ga0501082_0120776_925_1812 292
123 3300037418 Ga0395900_0000378 Ga0395900_0000378_62971_63906 293
124 3300038443 Ga0395901_0370072 Ga0395901_0370072_31_987 293
125 3300049569 Ga0501032_0146322 Ga0501032_0146322_509_1393 293
126 3300049570 Ga0501033_0150575 Ga0501033_0150575_104_988 293
127 3300049571 Ga0501034_0003581 Ga0501034_0003581_14640_15524 293
128 3300049572 Ga0501036_0097979 Ga0501036_0097979_1522_2406 293
129 3300049573 Ga0501037_0108610 Ga0501037_0108610_481_1365 293
130 3300049580 Ga0501046_0184085 Ga0501046_0184085_436_1320 293
131 3300049581 Ga0501047_0089651 Ga0501047_0089651_1943_2827 293
132 3300049582 Ga0501048_0186862 Ga0501048_0186862_523_1407 293
133 3300049585 Ga0501069_0164776 Ga0501069_0164776_185_1069 293
134 3300049586 Ga0501070_0244485 Ga0501070_0244485_526_1410 293
135 3300049589 Ga0501073_0175487 Ga0501073_0175487_168_1052 293
136 3300049822 Ga0501035_0204190 Ga0501035_0204190_456_1340 293
137 3300049823 Ga0501044_0398308 Ga0501044_0398308_58_942 293
138 3300037312 Ga0395899_0203222 Ga0395899_0203222_91_981 294
139 3300037418 Ga0395900_0286793 Ga0395900_0286793_342_1232 294
140 3300037466 Ga0395898_0321873 Ga0395898_0321873_477_1367 294
141 3300037471 Ga0395905_0121989 Ga0395905_0121989_1435_2325 294
142 3300038443 Ga0395901_0372160 Ga0395901_0372160_488_1378 294
143 3300042993 Ga0439440_0034302 Ga0439440_0034302_227_1117 294
144 3300048905 Ga0496102_0221441 Ga0496102_0221441_596_1540 294
145 3300005983 Ga0081540_1027794 Ga0081540_10277943 295
146 3300006914 Ga0075436_100305055 Ga0075436_1003050551 295
147 3300032002 Ga0307416_100777603 Ga0307416_1007776031 295
148 3300035083 Ga0373926_0001135 Ga0373926_0001135_4206_5138 295
149 3300035725 Ga0373947_0000046 Ga0373947_0000046_4217_5149 295
150 3300045049 Ga0466959_0000227 Ga0466959_0000227_21558_22457 295
151 3300050513 nmdc:mga0rr50_147520_c1 nmdc:mga0rr50_147520_c1_343_1242 295
152 3300005262 Ga0065165_1037650 Ga0065165_10376502 296
153 3300005340 Ga0070689_100472460 Ga0070689_1004724601 296
154 3300021361 Ga0213872_10071343 Ga0213872_100713433 296
155 3300025298 Ga0209050_1000529 Ga0209050_100052935 296
156 3300053156 Ga0500622_0003904 Ga0500622_0003904_7271_8179 296
157 3300025922 Ga0207646_10266381 Ga0207646_102663811 297
158 3300049584 Ga0501068_0199004 Ga0501068_0199004_47_961 297
159 3300031731 Ga0307405_10123738 Ga0307405_101237381 298
160 3300032002 Ga0307416_100014387 Ga0307416_1000143874 298
161 3300049513 Ga0501290_007435 Ga0501290_007435_83_1009 298
162 3300049515 Ga0501292_010030 Ga0501292_010030_407_1333 298
163 3300049522 Ga0501299_015598 Ga0501299_015598_299_1225 298
164 3300049523 Ga0501300_006115 Ga0501300_006115_23_949 298
165 3300049653 Ga0501206_005862 Ga0501206_005862_440_1366 298
166 3300049660 Ga0501216_012087 Ga0501216_012087_409_1335 298
167 3300049665 Ga0501227_034739 Ga0501227_034739_126_1052 298
168 3300049668 Ga0501233_022257 Ga0501233_022257_57_983 298
169 3300049673 Ga0501240_014254 Ga0501240_014254_97_1023 298
170 3300049675 Ga0501243_014293 Ga0501243_014293_44_970 298
171 3300049676 Ga0501246_002180 Ga0501246_002180_485_1411 298
172 3300049677 Ga0501247_003147 Ga0501247_003147_435_1361 298
173 3300049688 Ga0501259_012037 Ga0501259_012037_438_1364 298
174 3300049705 Ga0501225_0036910 Ga0501225_0036910_385_1311 298
175 3300049707 Ga0501234_011346 Ga0501234_011346_403_1329 298
176 3300049763 Ga0501266_008560 Ga0501266_008560_297_1223 298
177 3300049767 Ga0501270_005702 Ga0501270_005702_73_999 298
178 3300049768 Ga0501271_004239 Ga0501271_004239_372_1298 298
179 3300049772 Ga0501275_002851 Ga0501275_002851_535_1461 298
180 3300049774 Ga0501278_002203 Ga0501278_002203_44_970 298
181 3300049851 Ga0501212_008828 Ga0501212_008828_66_992 298
182 3300044684 Ga0466966_0127454 Ga0466966_0127454_439_1404 299
183 3300045049 Ga0466959_0194825 Ga0466959_0194825_54_1019 299
184 3300049578 Ga0501042_0045991 Ga0501042_0045991_2070_3020 300
185 3300005981 Ga0081538_10032901 Ga0081538_100329012 302
186 3300007076 Ga0075435_100264306 Ga0075435_1002643062 302
187 3300031665 Ga0316575_10124666 Ga0316575_101246661 302
188 3300035724 Ga0373933_0141488 Ga0373933_0141488_65_982 302
189 3300036401 Ga0373937_0346646 Ga0373937_0346646_104_1021 302
190 3300036712 Ga0316584_0212225 Ga0316584_0212225_397_1314 302
191 3300046517 Ga0495630_0207746 Ga0495630_0207746_464_1381 302
192 3300046559 Ga0495667_0216406 Ga0495667_0216406_228_1145 302
193 3300046675 Ga0495657_0153538 Ga0495657_0153538_116_1033 302
194 3300046809 Ga0495600_0159426 Ga0495600_0159426_102_1019 302
195 3300047319 Ga0495674_0398442 Ga0495674_0398442_169_1086 302
196 3300047322 Ga0495680_0177671 Ga0495680_0177671_143_1060 302
197 3300047471 Ga0495684_0185774 Ga0495684_0185774_103_1020 302
198 3300047673 Ga0495593_0086118 Ga0495593_0086118_192_1109 302
199 3300048912 Ga0496109_0480965 Ga0496109_0480965_39_1079 302
200 3300053085 Ga0495619_0137127 Ga0495619_0137127_350_1267 302
201 3300060353 Ga0501082_0076294 Ga0501082_0076294_905_1822 302
202 3300046475 Ga0495639_0054538 Ga0495639_0054538_845_1807 304
203 3300046531 Ga0495665_0063288 Ga0495665_0063288_680_1642 304
204 3300046674 Ga0495588_0079006 Ga0495588_0079006_353_1315 304
205 3300046681 Ga0495647_0054186 Ga0495647_0054186_426_1388 304
206 3300046690 Ga0495624_0174679 Ga0495624_0174679_53_1015 304
207 3300048905 Ga0496102_0021137 Ga0496102_0021137_318_1280 304
208 3300048908 Ga0496105_0129270 Ga0496105_0129270_423_1385 304
209 3300048911 Ga0496108_0033297 Ga0496108_0033297_464_1426 304
210 3300048912 Ga0496109_0096395 Ga0496109_0096395_378_1340 304
211 3300048913 Ga0496110_0013445 Ga0496110_0013445_1107_2069 304
212 3300048914 Ga0496111_0081883 Ga0496111_0081883_581_1543 304
213 3300048916 Ga0496113_0182230 Ga0496113_0182230_89_1051 304
214 3300005564 Ga0070664_100059575 Ga0070664_1000595753 307
215 3300006028 Ga0070717_10198164 Ga0070717_101981643 307
216 3300014325 Ga0163163_10070192 Ga0163163_100701925 307
217 3300044694 Ga0466963_0182237 Ga0466963_0182237_62_1003 307
218 3300045836 Ga0466958_0171378 Ga0466958_0171378_408_1349 307
219 3300045976 Ga0466967_0000565 Ga0466967_0000565_4606_5556 307
220 3300045976 Ga0466967_0092770 Ga0466967_0092770_1671_2621 307
221 3300006175 Ga0070712_100197944 Ga0070712_1001979441 309
222 3300025915 Ga0207693_10317398 Ga0207693_103173981 309
223 3300002075 JGI24738J21930_10012959 JGI24738J21930_100129592 310
224 3300005334 Ga0068869_100325445 Ga0068869_1003254452 310
225 3300005338 Ga0068868_100455425 Ga0068868_1004554251 310
226 3300005347 Ga0070668_100251076 Ga0070668_1002510761 310
227 3300005353 Ga0070669_100244226 Ga0070669_1002442262 310
228 3300005354 Ga0070675_100314432 Ga0070675_1003144321 310
229 3300005366 Ga0070659_100149396 Ga0070659_1001493962 310
230 3300005434 Ga0070709_10145488 Ga0070709_101454882 310
231 3300005439 Ga0070711_100265439 Ga0070711_1002654391 310
232 3300005456 Ga0070678_100068544 Ga0070678_1000685442 310
233 3300005457 Ga0070662_100220069 Ga0070662_1002200691 310
234 3300005545 Ga0070695_100176840 Ga0070695_1001768401 310
235 3300005546 Ga0070696_100188609 Ga0070696_1001886091 310
236 3300005547 Ga0070693_100163008 Ga0070693_1001630083 310
237 3300005578 Ga0068854_100211899 Ga0068854_1002118993 310
238 3300005718 Ga0068866_10130512 Ga0068866_101305121 310
239 3300005843 Ga0068860_100602020 Ga0068860_1006020202 310
240 3300005844 Ga0068862_100150457 Ga0068862_1001504574 310
241 3300006173 Ga0070716_100084656 Ga0070716_1000846563 310
242 3300006175 Ga0070712_100236763 Ga0070712_1002367631 310
243 3300006881 Ga0068865_100204904 Ga0068865_1002049041 310
244 3300009098 Ga0105245_10180561 Ga0105245_101805612 310
245 3300010375 Ga0105239_10178084 Ga0105239_101780842 310
246 3300013307 Ga0157372_10347757 Ga0157372_103477572 310
247 3300014745 Ga0157377_10101347 Ga0157377_101013473 310
248 3300014969 Ga0157376_10259691 Ga0157376_102596911 310
249 3300025901 Ga0207688_10031513 Ga0207688_100315131 310
250 3300025933 Ga0207706_10118025 Ga0207706_101180254 310
251 3300025939 Ga0207665_10199989 Ga0207665_101999891 310
252 3300025949 Ga0207667_10635987 Ga0207667_106359872 310
253 3300025972 Ga0207668_10285886 Ga0207668_102858861 310
254 3300026118 Ga0207675_100099569 Ga0207675_1000995694 310
255 3300026121 Ga0207683_10026680 Ga0207683_100266803 310
256 3300028381 Ga0268264_10520971 Ga0268264_105209712 310
257 3300048905 Ga0496102_0228685 Ga0496102_0228685_667_1599 310
258 3300048906 Ga0496103_0170972 Ga0496103_0170972_28_960 310
259 3300048907 Ga0496104_0153547 Ga0496104_0153547_135_1067 310
260 3300048909 Ga0496106_0267488 Ga0496106_0267488_419_1351 310
261 3300048917 Ga0496114_0321370 Ga0496114_0321370_399_1331 310
262 3300048918 Ga0496115_0261098 Ga0496115_0261098_462_1394 310

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00665

rve

Integrase core domain

170

274

0.97

PF13276

HTH_21

HTH-like domain

89

146

0.95

PF13683

rve_3

Integrase core domain

262

329

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o03-assembly1.cif.gz_A-2 crystal structure of furb from m. tuberculosis- a zinc uptake regulator 0.8807 48 95
6qbv-assembly1.cif.gz_B structure of the htlv-2 integrase catalytic core domain in complex with magnesium (dimeric form) 0.8562 129 291
6qbv-assembly2.cif.gz_D structure of the htlv-2 integrase catalytic core domain in complex with magnesium (dimeric form) 0.8523 129 291
6qbt-assembly1.cif.gz_A structure of the htlv-2 integrase catalytic core domain in complex with magnesium (trimeric form) 0.8408 129 291
6qbv-assembly1.cif.gz_B structure of the htlv-2 integrase catalytic core domain in complex with magnesium (dimeric form) 0.8343 129 291
ID Description Score Start End Superfamily
af_P9WKH9_102_261_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9888 128 287 3.30.420.10
af_P9WKH9_102_261_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9827 128 287 3.30.420.10
af_Q47718_102_174_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.954 125 189 3.30.420.10
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9448 128 291 3.30.420.10
af_P19769_115_278_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.936 126 293 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A521FCE8-F1-model_v4 Integrase core domain-containing protein 0.9643 135 297 GO:0003676
GO:0015074
AF-A0A554V7M3-F1-model_v4 DDE-type integrase/transposase/recombinase 0.9629 127 276 GO:0003676
GO:0015074
AF-A0A7W1XUB0-F1-model_v4 IS3 family transposase 0.9599 120 295 GO:0003676
GO:0015074
AF-A0A2H0P6T9-F1-model_v4 IS3 family transposase 0.9584 128 271 GO:0003676
GO:0015074
AF-A0A2W7JYC2-F1-model_v4 deleted 0.9571 153 297

Feature Viewer

pLDDT pTM Quality
84.73 0.78 High
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Predicted Structure (AlphaFold2)

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