F371363

General Info

Members Datasets Scaffolds Average Seq Length
262 148 524 392

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0075935|Ga0496104_0075935_1373_2722
Length 449
Sequence MPIASSDSRIASSGSAGRGAPSTVARPDVVSSPPPFRSPSTTPGIVRSRSGPADRAARNAREDRTLSWALTEEERLLRDTAREFARRSIAPTAIERDEAERFDRGIFAEMGALGLTGAPLPESVGGGGFSYLGWTLVMEEIGAADMASAVTLSVHILSQYPVVTWGTPEQRESWLAPMVTGAALGAFALTEPHAGSDAAAIRTRAERVGPADAPEGYRLTGTKIWISNAPEADRYLVFASVDPSRGSKGIAAFLVERGMDGFGFGAHEKKMGIRACPAAELVFEDCFVPAANRLGAEGDGYRIALSALAEGRISIAAACVGIARSALEAAAAYLTQRKAFGGPLADQQALRFLVAEMARDVEAARALTRQAAAAKDQGESILVPSSLAKWTASDTAMRVATDAVQLFGASGYSRETGIERLMRDAKGAQIYEGTNQIHRSIVADDVLRA

Samples

Sample ID Description Type Environment
1 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
2 3300003349 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
48 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
72 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
73 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
74 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
77 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
78 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
84 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
85 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
86 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
90 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
91 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
92 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
93 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
94 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
95 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
96 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
97 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
98 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
99 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
100 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
101 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
102 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
103 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
104 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
108 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
109 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
110 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
121 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
122 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
127 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
141 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
142 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
143 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
144 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
145 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.11
Rhizosphere 93.89
Stem 0
Stem Tuber 0
Unclassified 0.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496104_0075935 3300048907 Bacteria 3200
2 JGI26129J50193_1000683 3300003349 Bacteria 2182
3 Ga0065707_10108753 3300005295 Bacteria 2497
4 Ga0070689_100045289 3300005340 Bacteria 3388
5 Ga0070687_100003757 3300005343 Bacteria 5948
6 Ga0070675_100054429 3300005354 Bacteria 3292
7 Ga0070659_100065347 3300005366 Bacteria 2881
8 Ga0070705_100010407 3300005440 Bacteria 4655
9 Ga0070700_100090516 3300005441 Bacteria 1995
10 Ga0070700_100111873 3300005441 Bacteria 1817
11 Ga0070694_100001401 3300005444 Bacteria 14101
12 Ga0070708_100001867 3300005445 Bacteria 16181
13 Ga0070708_100006495 3300005445 Bacteria 9304
14 Ga0070678_100031164 3300005456 Bacteria 3674
15 Ga0068867_100034718 3300005459 Bacteria 3657
16 Ga0070706_100065649 3300005467 Bacteria 3357
17 Ga0070707_100106691 3300005468 Bacteria 2717
18 Ga0070698_100001422 3300005471 Bacteria 26500
19 Ga0070698_100048560 3300005471 Bacteria 4336
20 Ga0070698_100094526 3300005471 Bacteria 2968
21 Ga0070698_100242175 3300005471 Bacteria 1737
22 Ga0070699_100019469 3300005518 Bacteria 5845
23 Ga0070699_100074863 3300005518 Bacteria 2946
24 Ga0070699_100279667 3300005518 Bacteria 1495
25 Ga0070679_100074378 3300005530 Bacteria 3388
26 Ga0070679_100123442 3300005530 Bacteria 2573
27 Ga0070697_100010046 3300005536 Bacteria 7387
28 Ga0070697_100069204 3300005536 Bacteria 2890
29 Ga0070697_100306848 3300005536 Bacteria 1365
30 Ga0070672_100066247 3300005543 Bacteria 2859
31 Ga0070686_100169063 3300005544 Bacteria 1545
32 Ga0070695_100063328 3300005545 Bacteria 2403
33 Ga0070696_100005226 3300005546 Bacteria 8678
34 Ga0070693_100030762 3300005547 Bacteria 2938
35 Ga0070665_100268148 3300005548 Bacteria 1709
36 Ga0070704_100023757 3300005549 Bacteria 4011
37 Ga0070704_100053360 3300005549 Bacteria 2856
38 Ga0070664_100153698 3300005564 Bacteria 2032
39 Ga0068859_100224659 3300005617 Bacteria 1966
40 Ga0068864_100039253 3300005618 Bacteria 4046
41 Ga0068864_100116195 3300005618 Bacteria 2387
42 Ga0068870_10053604 3300005840 Bacteria 2142
43 Ga0081539_10011563 3300005985 Bacteria 6958
44 Ga0081539_10023392 3300005985 Bacteria 4049
45 Ga0075434_100129312 3300006871 Bacteria 2544
46 Ga0068865_100040600 3300006881 Bacteria 3163
47 Ga0075436_100214789 3300006914 Bacteria 1364
48 Ga0097620_100224661 3300006931 Bacteria 1966
49 Ga0111539_10049769 3300009094 Bacteria 4995
50 Ga0111539_10051807 3300009094 Bacteria 4887
51 Ga0105245_10062177 3300009098 Bacteria 3368
52 Ga0105245_10203341 3300009098 Bacteria 1903
53 Ga0114129_10309211 3300009147 Bacteria 2104
54 Ga0105243_10032186 3300009148 Bacteria 4050
55 Ga0105242_10084595 3300009176 Bacteria 2658
56 Ga0105239_10160339 3300010375 Bacteria 2513
57 Ga0105246_10057728 3300011119 Bacteria 2687
58 Ga0157378_10016401 3300013297 Bacteria 6486
59 Ga0157378_10028297 3300013297 Bacteria 4944
60 Ga0163162_10216847 3300013306 Bacteria 2044
61 Ga0157375_10277638 3300013308 Bacteria 1838
62 Ga0163163_10075175 3300014325 Bacteria 3372
63 Ga0157377_10021255 3300014745 Bacteria 3412
64 Ga0207688_10056228 3300025901 Bacteria 2210
65 Ga0207643_10008475 3300025908 Bacteria 5516
66 Ga0207684_10010040 3300025910 Bacteria 8341
67 Ga0207684_10028687 3300025910 Bacteria 4741
68 Ga0207662_10003927 3300025918 Bacteria 7747
69 Ga0207657_10093068 3300025919 Bacteria 2511
70 Ga0207652_10101023 3300025921 Bacteria 2547
71 Ga0207646_10114948 3300025922 Bacteria 2417
72 Ga0207646_10187832 3300025922 Bacteria 1866
73 Ga0207690_10044990 3300025932 Bacteria 2914
74 Ga0207706_10011748 3300025933 Bacteria 7979
75 Ga0207709_10034632 3300025935 Bacteria 2978
76 Ga0207691_10040887 3300025940 Bacteria 4283
77 Ga0207679_10143991 3300025945 Bacteria 1930
78 Ga0207703_10237643 3300026035 Bacteria 1636
79 Ga0207639_10130630 3300026041 Bacteria 2078
80 Ga0207678_10098913 3300026067 Bacteria 2492
81 Ga0207708_10052557 3300026075 Bacteria 3103
82 Ga0207708_10064132 3300026075 Bacteria 2806
83 Ga0207648_10010048 3300026089 Bacteria 9003
84 Ga0207674_10092233 3300026116 Bacteria 3018
85 Ga0207683_10022868 3300026121 Bacteria 5371
86 Ga0207683_10266474 3300026121 Bacteria 1565
87 Ga0209971_1016675 3300027682 Bacteria 1741
88 Ga0209998_10000051 3300027717 Bacteria 47606
89 Ga0209998_10002056 3300027717 Bacteria 4712
90 Ga0209998_10003651 3300027717 Bacteria 3340
91 Ga0209974_10003207 3300027876 Bacteria 5915
92 Ga0209974_10033764 3300027876 Bacteria 1698
93 Ga0268264_10058119 3300028381 Bacteria 3237
94 Ga0265319_1028225 3300028563 Bacteria 1980
95 Ga0265324_10028911 3300029957 Bacteria 1953
96 Ga0265320_10021904 3300031240 Bacteria 3429
97 Ga0265325_10010516 3300031241 Bacteria 5353
98 Ga0307408_100134347 3300031548 Bacteria 1934
99 Ga0265314_10026638 3300031711 Bacteria 4340
100 Ga0316578_10002294 3300031728 Bacteria 8311
101 Ga0316577_10003664 3300031733 Bacteria 7808
102 Ga0316577_10025435 3300031733 Bacteria 3292
103 Ga0307406_10017542 3300031901 Bacteria 4170
104 Ga0307412_10211113 3300031911 Bacteria 1481
105 Ga0307416_100019532 3300032002 Bacteria 4807
106 Ga0373937_0125078 3300036401 Bacteria 2398
107 Ga0316582_0099553 3300036647 Bacteria 1924
108 Ga0316584_0031073 3300036712 Bacteria 3949
109 Ga0316584_0032665 3300036712 Bacteria 3853
110 Ga0316581_0002249 3300037588 Bacteria 4570
111 Ga0450910_013381 3300042147 Bacteria 1193
112 Ga0451577_0122545 3300042876 Bacteria 2329
113 Ga0451577_0275535 3300042876 Bacteria 1524
114 Ga0451576_0043179 3300045051 Bacteria 4757
115 Ga0495651_0024311 3300046462 Bacteria 4714
116 Ga0495651_0065149 3300046462 Bacteria 2783
117 Ga0495653_0177619 3300046463 Bacteria 1464
118 Ga0495608_0091909 3300046511 Bacteria 1962
119 Ga0495618_0020168 3300046514 Bacteria 4104
120 Ga0495628_0068211 3300046516 Bacteria 2776
121 Ga0495630_0113061 3300046517 Bacteria 2057
122 Ga0495640_0041653 3300046533 Bacteria 3208
123 Ga0495645_0120739 3300046543 Bacteria 1845
124 Ga0495634_0115315 3300046642 Bacteria 1724
125 Ga0495600_0084392 3300046809 Bacteria 2073
126 Ga0495674_0019917 3300047319 Bacteria 6220
127 Ga0495684_0055968 3300047471 Bacteria 3008
128 Ga0495602_0181596 3300048088 Bacteria 1622
129 Ga0496102_0215498 3300048905 Bacteria 1810
130 Ga0496104_0005287 3300048907 Bacteria 11286
131 Ga0496106_0187419 3300048909 Bacteria 1644
132 Ga0496108_0091647 3300048911 Bacteria 2583
133 Ga0496108_0157973 3300048911 Bacteria 1958
134 Ga0496109_0024250 3300048912 Bacteria 5391
135 Ga0496109_0074487 3300048912 Bacteria 3121
136 Ga0496110_0085273 3300048913 Bacteria 2819
137 Ga0496111_0090592 3300048914 Bacteria 2240
138 Ga0496112_0000005 3300048915 Bacteria 525541
139 Ga0496112_0089768 3300048915 Bacteria 3041
140 Ga0496112_0135196 3300048915 Bacteria 2436
141 Ga0496112_0187858 3300048915 Bacteria 2029
142 Ga0496113_0021378 3300048916 Bacteria 4564
143 Ga0496113_0029751 3300048916 Bacteria 3947
144 Ga0501031_0008025 3300049568 Bacteria 6873
145 Ga0501031_0066474 3300049568 Bacteria 2349
146 Ga0501031_0085546 3300049568 Bacteria 2056
147 Ga0501036_0033990 3300049572 Bacteria 4312
148 Ga0501036_0099511 3300049572 Bacteria 2459
149 Ga0501036_0101048 3300049572 Bacteria 2440
150 Ga0501036_0114747 3300049572 Bacteria 2276
151 Ga0501037_0033370 3300049573 Bacteria 3802
152 Ga0501038_0050563 3300049574 Bacteria 3590
153 Ga0501039_0049818 3300049575 Bacteria 3239
154 Ga0501039_0089729 3300049575 Bacteria 2395
155 Ga0501039_0152189 3300049575 Bacteria 1817
156 Ga0501039_0220507 3300049575 Bacteria 1491
157 Ga0501040_0005897 3300049576 Bacteria 7930
158 Ga0501040_0007491 3300049576 Bacteria 7063
159 Ga0501040_0026994 3300049576 Bacteria 3863
160 Ga0501040_0039167 3300049576 Bacteria 3223
161 Ga0501040_0039437 3300049576 Bacteria 3212
162 Ga0501041_0006283 3300049577 Bacteria 6953
163 Ga0501041_0040335 3300049577 Bacteria 2834
164 Ga0501042_0002303 3300049578 Bacteria 11671
165 Ga0501042_0005059 3300049578 Bacteria 8459
166 Ga0501042_0068778 3300049578 Bacteria 2532
167 Ga0501046_0047911 3300049580 Bacteria 3386
168 Ga0501046_0165025 3300049580 Bacteria 1664
169 Ga0501048_0005402 3300049582 Bacteria 9715
170 Ga0501048_0006438 3300049582 Bacteria 8926
171 Ga0501048_0041241 3300049582 Bacteria 3307
172 Ga0501048_0043780 3300049582 Bacteria 3203
173 Ga0501067_0001175 3300049583 Bacteria 14194
174 Ga0501067_0078308 3300049583 Bacteria 1832
175 Ga0501068_0004520 3300049584 Bacteria 7572
176 Ga0501068_0018609 3300049584 Bacteria 4022
177 Ga0501069_0001996 3300049585 Bacteria 10216
178 Ga0501069_0019044 3300049585 Bacteria 3708
179 Ga0501069_0055395 3300049585 Bacteria 2209
180 Ga0501069_0067125 3300049585 Bacteria 2006
181 Ga0501070_0025470 3300049586 Bacteria 4962
182 Ga0501071_0006940 3300049587 Bacteria 7390
183 Ga0501071_0013931 3300049587 Bacteria 5493
184 Ga0501071_0016073 3300049587 Bacteria 5144
185 Ga0501071_0044248 3300049587 Bacteria 3193
186 Ga0501072_0002353 3300049588 Bacteria 14178
187 Ga0501072_0033195 3300049588 Bacteria 4044
188 Ga0501072_0073005 3300049588 Bacteria 2712
189 Ga0501072_0141670 3300049588 Bacteria 1917
190 Ga0501073_0039321 3300049589 Bacteria 3351
191 Ga0501074_0024029 3300049590 Bacteria 4429
192 Ga0501074_0072218 3300049590 Bacteria 2479
193 Ga0501074_0093791 3300049590 Bacteria 2150
194 Ga0501074_0181710 3300049590 Bacteria 1500
195 Ga0501075_0035794 3300049591 Bacteria 3703
196 Ga0501075_0041972 3300049591 Bacteria 3429
197 Ga0501075_0058164 3300049591 Bacteria 2911
198 Ga0501075_0066560 3300049591 Bacteria 2719
199 Ga0501075_0126815 3300049591 Bacteria 1943
200 Ga0501075_0139383 3300049591 Bacteria 1848
201 Ga0501075_0150226 3300049591 Bacteria 1776
202 Ga0501076_0008374 3300049592 Bacteria 7579
203 Ga0501076_0036671 3300049592 Bacteria 3842
204 Ga0501076_0055203 3300049592 Bacteria 3150
205 Ga0501076_0057937 3300049592 Bacteria 3077
206 Ga0501076_0071657 3300049592 Bacteria 2773
207 Ga0501076_0164255 3300049592 Bacteria 1810
208 Ga0501076_0205790 3300049592 Bacteria 1607
209 Ga0501077_0020845 3300049593 Bacteria 4150
210 Ga0501077_0035587 3300049593 Bacteria 3170
211 Ga0501077_0037162 3300049593 Bacteria 3103
212 Ga0501077_0193692 3300049593 Bacteria 1291
213 Ga0501079_0059469 3300049741 Bacteria 2947
214 Ga0501079_0083136 3300049741 Bacteria 2477
215 Ga0501079_0144698 3300049741 Bacteria 1852
216 Ga0501079_0166679 3300049741 Bacteria 1718
217 Ga0501080_0003383 3300049742 Bacteria 14065
218 Ga0501080_0044958 3300049742 Bacteria 4110
219 Ga0501080_0088249 3300049742 Bacteria 2881
220 Ga0501081_0007496 3300049743 Bacteria 7076
221 Ga0501081_0069571 3300049743 Bacteria 2452
222 Ga0501083_0026618 3300049744 Bacteria 3996
223 Ga0501035_0050921 3300049822 Bacteria 3709
224 Ga0501044_0061494 3300049823 Bacteria 3842
225 Ga0501045_0003674 3300049824 Bacteria 10550
226 Ga0501045_0028552 3300049824 Bacteria 4025
227 Ga0501045_0040422 3300049824 Bacteria 3394
228 Ga0501045_0045922 3300049824 Bacteria 3180
229 Ga0501045_0053236 3300049824 Bacteria 2957
230 Ga0501045_0058567 3300049824 Bacteria 2821
231 nmdc:mga05p37_102784_c1 3300050507 Bacteria 3518
232 nmdc:mga05p37_174414_c1 3300050507 Bacteria 2620
233 nmdc:mga05p37_245381_c1 3300050507 Bacteria 2150
234 nmdc:mga08y16_39901_c1 3300050511 Bacteria 4924
235 nmdc:mga08y16_66682_c1 3300050511 Bacteria 3756
236 nmdc:mga0n895_43163_c1 3300050512 Bacteria 4393
237 nmdc:mga0n895_45490_c1 3300050512 Bacteria 4283
238 nmdc:mga0rr50_46706_c1 3300050513 Bacteria 3189
239 nmdc:mga08x19_260100_c1 3300050514 Bacteria 1199
240 Ga0495601_0065612 3300053077 Unclassified 2311
241 Ga0495601_0112955 3300053077 Bacteria 1760
242 Ga0495595_0065375 3300053084 Bacteria 1711
243 Ga0495619_0093686 3300053085 Bacteria 2036
244 Ga0495619_0100569 3300053085 Bacteria 1967
245 Ga0501084_0005869 3300054114 Bacteria 10106
246 Ga0501084_0029865 3300054114 Bacteria 4559
247 Ga0501084_0047182 3300054114 Bacteria 3607
248 Ga0501084_0086533 3300054114 Bacteria 2631
249 Ga0501084_0104165 3300054114 Bacteria 2383
250 Ga0501082_0011000 3300060353 Bacteria 7781
251 Ga0501082_0053373 3300060353 Bacteria 3484
252 Ga0501082_0055017 3300060353 Bacteria 3429
253 Ga0501082_0094272 3300060353 Bacteria 2586
254 Ga0501082_0097690 3300060353 Bacteria 2539
255 Ga0530510_0003060 3300061734 Bacteria 11485
256 Ga0530510_0019912 3300061734 Bacteria 4768
257 Ga0530510_0020319 3300061734 Bacteria 4721
258 Ga0530510_0032217 3300061734 Bacteria 3769
259 Ga0530510_0037065 3300061734 Bacteria 3514
260 Ga0530510_0054719 3300061734 Bacteria 2884
261 Ga0530510_0070346 3300061734 Bacteria 2540
262 Ga0530510_0228413 3300061734 Bacteria 1384
263 Ga0496104_0075935
264 JGI26129J50193_1000683
265 Ga0065707_10108753
266 Ga0070689_100045289
267 Ga0070687_100003757
268 Ga0070675_100054429
269 Ga0070659_100065347
270 Ga0070705_100010407
271 Ga0070700_100090516
272 Ga0070700_100111873
273 Ga0070694_100001401
274 Ga0070708_100001867
275 Ga0070708_100006495
276 Ga0070678_100031164
277 Ga0068867_100034718
278 Ga0070706_100065649
279 Ga0070707_100106691
280 Ga0070698_100001422
281 Ga0070698_100048560
282 Ga0070698_100094526
283 Ga0070698_100242175
284 Ga0070699_100019469
285 Ga0070699_100074863
286 Ga0070699_100279667
287 Ga0070679_100074378
288 Ga0070679_100123442
289 Ga0070697_100010046
290 Ga0070697_100069204
291 Ga0070697_100306848
292 Ga0070672_100066247
293 Ga0070686_100169063
294 Ga0070695_100063328
295 Ga0070696_100005226
296 Ga0070693_100030762
297 Ga0070665_100268148
298 Ga0070704_100023757
299 Ga0070704_100053360
300 Ga0070664_100153698
301 Ga0068859_100224659
302 Ga0068864_100039253
303 Ga0068864_100116195
304 Ga0068870_10053604
305 Ga0081539_10011563
306 Ga0081539_10023392
307 Ga0075434_100129312
308 Ga0068865_100040600
309 Ga0075436_100214789
310 Ga0097620_100224661
311 Ga0111539_10049769
312 Ga0111539_10051807
313 Ga0105245_10062177
314 Ga0105245_10203341
315 Ga0114129_10309211
316 Ga0105243_10032186
317 Ga0105242_10084595
318 Ga0105239_10160339
319 Ga0105246_10057728
320 Ga0157378_10016401
321 Ga0157378_10028297
322 Ga0163162_10216847
323 Ga0157375_10277638
324 Ga0163163_10075175
325 Ga0157377_10021255
326 Ga0207688_10056228
327 Ga0207643_10008475
328 Ga0207684_10010040
329 Ga0207684_10028687
330 Ga0207662_10003927
331 Ga0207657_10093068
332 Ga0207652_10101023
333 Ga0207646_10114948
334 Ga0207646_10187832
335 Ga0207690_10044990
336 Ga0207706_10011748
337 Ga0207709_10034632
338 Ga0207691_10040887
339 Ga0207679_10143991
340 Ga0207703_10237643
341 Ga0207639_10130630
342 Ga0207678_10098913
343 Ga0207708_10052557
344 Ga0207708_10064132
345 Ga0207648_10010048
346 Ga0207674_10092233
347 Ga0207683_10022868
348 Ga0207683_10266474
349 Ga0209971_1016675
350 Ga0209998_10000051
351 Ga0209998_10002056
352 Ga0209998_10003651
353 Ga0209974_10003207
354 Ga0209974_10033764
355 Ga0268264_10058119
356 Ga0265319_1028225
357 Ga0265324_10028911
358 Ga0265320_10021904
359 Ga0265325_10010516
360 Ga0307408_100134347
361 Ga0265314_10026638
362 Ga0316578_10002294
363 Ga0316577_10003664
364 Ga0316577_10025435
365 Ga0307406_10017542
366 Ga0307412_10211113
367 Ga0307416_100019532
368 Ga0373937_0125078
369 Ga0316582_0099553
370 Ga0316584_0031073
371 Ga0316584_0032665
372 Ga0316581_0002249
373 Ga0450910_013381
374 Ga0451577_0122545
375 Ga0451577_0275535
376 Ga0451576_0043179
377 Ga0495651_0024311
378 Ga0495651_0065149
379 Ga0495653_0177619
380 Ga0495608_0091909
381 Ga0495618_0020168
382 Ga0495628_0068211
383 Ga0495630_0113061
384 Ga0495640_0041653
385 Ga0495645_0120739
386 Ga0495634_0115315
387 Ga0495600_0084392
388 Ga0495674_0019917
389 Ga0495684_0055968
390 Ga0495602_0181596
391 Ga0496102_0215498
392 Ga0496104_0005287
393 Ga0496106_0187419
394 Ga0496108_0091647
395 Ga0496108_0157973
396 Ga0496109_0024250
397 Ga0496109_0074487
398 Ga0496110_0085273
399 Ga0496111_0090592
400 Ga0496112_0000005
401 Ga0496112_0089768
402 Ga0496112_0135196
403 Ga0496112_0187858
404 Ga0496113_0021378
405 Ga0496113_0029751
406 Ga0501031_0008025
407 Ga0501031_0066474
408 Ga0501031_0085546
409 Ga0501036_0033990
410 Ga0501036_0099511
411 Ga0501036_0101048
412 Ga0501036_0114747
413 Ga0501037_0033370
414 Ga0501038_0050563
415 Ga0501039_0049818
416 Ga0501039_0089729
417 Ga0501039_0152189
418 Ga0501039_0220507
419 Ga0501040_0005897
420 Ga0501040_0007491
421 Ga0501040_0026994
422 Ga0501040_0039167
423 Ga0501040_0039437
424 Ga0501041_0006283
425 Ga0501041_0040335
426 Ga0501042_0002303
427 Ga0501042_0005059
428 Ga0501042_0068778
429 Ga0501046_0047911
430 Ga0501046_0165025
431 Ga0501048_0005402
432 Ga0501048_0006438
433 Ga0501048_0041241
434 Ga0501048_0043780
435 Ga0501067_0001175
436 Ga0501067_0078308
437 Ga0501068_0004520
438 Ga0501068_0018609
439 Ga0501069_0001996
440 Ga0501069_0019044
441 Ga0501069_0055395
442 Ga0501069_0067125
443 Ga0501070_0025470
444 Ga0501071_0006940
445 Ga0501071_0013931
446 Ga0501071_0016073
447 Ga0501071_0044248
448 Ga0501072_0002353
449 Ga0501072_0033195
450 Ga0501072_0073005
451 Ga0501072_0141670
452 Ga0501073_0039321
453 Ga0501074_0024029
454 Ga0501074_0072218
455 Ga0501074_0093791
456 Ga0501074_0181710
457 Ga0501075_0035794
458 Ga0501075_0041972
459 Ga0501075_0058164
460 Ga0501075_0066560
461 Ga0501075_0126815
462 Ga0501075_0139383
463 Ga0501075_0150226
464 Ga0501076_0008374
465 Ga0501076_0036671
466 Ga0501076_0055203
467 Ga0501076_0057937
468 Ga0501076_0071657
469 Ga0501076_0164255
470 Ga0501076_0205790
471 Ga0501077_0020845
472 Ga0501077_0035587
473 Ga0501077_0037162
474 Ga0501077_0193692
475 Ga0501079_0059469
476 Ga0501079_0083136
477 Ga0501079_0144698
478 Ga0501079_0166679
479 Ga0501080_0003383
480 Ga0501080_0044958
481 Ga0501080_0088249
482 Ga0501081_0007496
483 Ga0501081_0069571
484 Ga0501083_0026618
485 Ga0501035_0050921
486 Ga0501044_0061494
487 Ga0501045_0003674
488 Ga0501045_0028552
489 Ga0501045_0040422
490 Ga0501045_0045922
491 Ga0501045_0053236
492 Ga0501045_0058567
493 nmdc:mga05p37_102784_c1
494 nmdc:mga05p37_174414_c1
495 nmdc:mga05p37_245381_c1
496 nmdc:mga08y16_39901_c1
497 nmdc:mga08y16_66682_c1
498 nmdc:mga0n895_43163_c1
499 nmdc:mga0n895_45490_c1
500 nmdc:mga0rr50_46706_c1
501 nmdc:mga08x19_260100_c1
502 Ga0495601_0065612
503 Ga0495601_0112955
504 Ga0495595_0065375
505 Ga0495619_0093686
506 Ga0495619_0100569
507 Ga0501084_0005869
508 Ga0501084_0029865
509 Ga0501084_0047182
510 Ga0501084_0086533
511 Ga0501084_0104165
512 Ga0501082_0011000
513 Ga0501082_0053373
514 Ga0501082_0055017
515 Ga0501082_0094272
516 Ga0501082_0097690
517 Ga0530510_0003060
518 Ga0530510_0019912
519 Ga0530510_0020319
520 Ga0530510_0032217
521 Ga0530510_0037065
522 Ga0530510_0054719
523 Ga0530510_0070346
524 Ga0530510_0228413

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

298

447

0.99

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

71

182

0.98

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

313

436

0.97

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

186

286

0.92

PF22924

ACOX_C_alpha1

Acyl-CoA oxidase, C-alpha1 domain

329

444

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4l1f-assembly1.cif.gz_A electron transferring flavoprotein of acidaminococcus fermentans: towards a mechanism of flavin-based electron bifurcation 0.9864 13 386
5ol2-assembly2.cif.gz_F the electron transferring flavoprotein/butyryl-coa dehydrogenase complex from clostridium difficile 0.9837 16 387
1jqi-assembly1.cif.gz_B crystal structure of rat short chain acyl-coa dehydrogenase complexed with acetoacetyl-coa 0.9831 14 390
4n5f-assembly1.cif.gz_A-2 crystal structure of a putative acyl-coa dehydrogenase with bound fadh2 from burkholderia cenocepacia j2315 0.9824 15 385
2vig-assembly1.cif.gz_A crystal structure of human short-chain acyl coa dehydrogenase 0.9819 15 391
ID Description Score Start End Superfamily
af_Q9VDT1_256_405_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9962 244 389 1.20.140.10
1jqiB03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9959 249 387 1.20.140.10
1jqiA03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9957 249 387 1.20.140.10
af_P96397_240_357_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9954 245 360 1.20.140.10
af_Q6AXI7_256_405_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9949 244 391 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A519UGP9-F1-model_v4 Acyl-CoA dehydrogenase 0.9958 224 387 GO:0003995
AF-A0A662YB15-F1-model_v4 Acyl-CoA dehydrogenase/oxidase C-terminal domain-containing protein 0.9948 255 393 GO:0003995
GO:0033539
GO:0046359
AF-A0A2N2FR64-F1-model_v4 Acyl-CoA dehydrogenase 0.9946 259 387 GO:0003995
AF-A0A7W0ZGZ9-F1-model_v4 Acyl-CoA dehydrogenase 0.9937 234 388 GO:0003995
AF-A0A4Q3UBN6-F1-model_v4 Acyl-CoA dehydrogenase 0.9935 222 387 GO:0003995

Map