F371314

General Info

Members Datasets Scaffolds Average Seq Length
262 172 524 342

Family's Representative Sequence

Representative Sequence 3300046500|Ga0495596_0062527|Ga0495596_0062527_72_1268
Length 388
Sequence MPLSNIDAMLGDISREITGGGEHTECAERATLQNKQTTEEDKVPFLRPASFVALLSAGIIGAGDRAWAQTPEQFYAGKNIDFVIGYPPGGSNDTLGRLVARHIGKHIPGKPNIIPKNMPGAGSFLAVNTVFNVSPKDGSVIGIGAPTMPLDERLGTQGVRFKTAELNWIGRTDSLINMVFMWKTSPVQTIADALKTEATLSGTGVGSTVSIYPTALNNVIGTKFKLVMGYKGSNEAMLAVERGEVEGHSTSWTALKVAHPDWMRDKTVSILVQFSLKRHPELPDVPTAVDLARNDEERAILSAIMNAAEVGTAFFTTPGAPADRVTALRRAFDAAMKDPELLSEAERMKVGISPLPGEELQKLVADVSNLSPALLDKVRAAYSAGKTN

Samples

Sample ID Description Type Environment
1 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
2 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
3 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
39 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
45 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
48 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
53 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
54 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
57 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
58 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
66 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
98 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
99 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
100 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
101 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
102 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
103 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
104 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
105 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
106 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
107 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
112 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
113 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
114 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
115 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
116 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
117 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
118 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
119 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
120 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
121 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
122 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
134 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
145 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
148 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
149 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
150 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
155 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
156 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
157 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
158 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
159 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
160 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
161 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
162 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
163 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
164 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
167 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
168 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
169 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
170 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
171 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
172 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.49
Nodule 0
Rhizoplane 15.27
Rhizosphere 77.86
Stem 0
Stem Tuber 0
Unclassified 4.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495596_0062527 3300046500 Bacteria 1449
2 JGI24750J21931_1001418 3300002070 Bacteria 2995
3 JGI24742J22300_10006969 3300002244 Bacteria 1863
4 JGI25153J46596_10006517 3300003215 Bacteria 5891
5 Ga0070676_10293339 3300005328 Bacteria 1100
6 Ga0070670_100018865 3300005331 Bacteria 5916
7 Ga0070666_10062738 3300005335 Bacteria 2518
8 Ga0070680_100367268 3300005336 Bacteria 1224
9 Ga0068868_100065465 3300005338 Bacteria 2887
10 Ga0070689_100007067 3300005340 Bacteria 7816
11 Ga0070689_100014804 3300005340 Bacteria 5674
12 Ga0070691_10111921 3300005341 Bacteria 1366
13 Ga0070687_100013608 3300005343 Bacteria 3630
14 Ga0070661_100184544 3300005344 Bacteria 1588
15 Ga0070668_100108122 3300005347 Bacteria 2211
16 Ga0070668_100187708 3300005347 Bacteria 1692
17 Ga0070669_100072160 3300005353 Bacteria 2555
18 Ga0070675_100076385 3300005354 Bacteria 2786
19 Ga0070675_100149502 3300005354 Bacteria 2002
20 Ga0070671_100219712 3300005355 Bacteria 1612
21 Ga0070709_10004190 3300005434 Bacteria 7770
22 Ga0070713_100021161 3300005436 Bacteria 4997
23 Ga0070711_100038383 3300005439 Bacteria 3220
24 Ga0070708_100025024 3300005445 Bacteria 5101
25 Ga0070678_100036349 3300005456 Bacteria 3447
26 Ga0070678_100074362 3300005456 Bacteria 2553
27 Ga0070678_100076151 3300005456 Bacteria 2526
28 Ga0070662_100055853 3300005457 Bacteria 2865
29 Ga0070681_10008982 3300005458 Bacteria 9827
30 Ga0070681_10037446 3300005458 Bacteria 4867
31 Ga0070699_100001574 3300005518 Bacteria 20871
32 Ga0070679_100030657 3300005530 Bacteria 5311
33 Ga0070679_100290978 3300005530 Bacteria 1585
34 Ga0070697_100055486 3300005536 Bacteria 3221
35 Ga0068853_100128909 3300005539 Bacteria 2263
36 Ga0070686_100080660 3300005544 Bacteria 2153
37 Ga0070664_100051307 3300005564 Bacteria 3492
38 Ga0068854_100060268 3300005578 Bacteria 2745
39 Ga0068864_100039709 3300005618 Bacteria 4022
40 Ga0068866_10011233 3300005718 Bacteria 3866
41 Ga0068861_100029799 3300005719 Bacteria 3994
42 Ga0068863_100026035 3300005841 Bacteria 5581
43 Ga0068860_100085323 3300005843 Bacteria 3004
44 Ga0068860_100176345 3300005843 Bacteria 2066
45 Ga0081455_10003294 3300005937 Bacteria 18687
46 Ga0081455_10009583 3300005937 Bacteria 9947
47 Ga0081455_10076067 3300005937 Bacteria 2767
48 Ga0081538_10001953 3300005981 Bacteria 20648
49 Ga0081538_10038363 3300005981 Bacteria 3091
50 Ga0081538_10048482 3300005981 Bacteria 2589
51 Ga0081540_1008269 3300005983 Bacteria 7286
52 Ga0081540_1012675 3300005983 Bacteria 5531
53 Ga0081540_1021071 3300005983 Bacteria 3897
54 Ga0081540_1036658 3300005983 Bacteria 2611
55 Ga0081539_10015684 3300005985 Bacteria 5485
56 Ga0070717_10012095 3300006028 Bacteria 6576
57 Ga0075365_10012904 3300006038 Bacteria 4979
58 Ga0075365_10080045 3300006038 Bacteria 2211
59 Ga0075364_10087596 3300006051 Bacteria 2064
60 Ga0075364_10305059 3300006051 Bacteria 1084
61 Ga0070715_10051775 3300006163 Bacteria 1769
62 Ga0070716_100036996 3300006173 Unclassified 2694
63 Ga0070712_100098649 3300006175 Bacteria 2155
64 Ga0075362_10107870 3300006177 Bacteria 1308
65 Ga0075369_10055382 3300006186 Bacteria 1723
66 Ga0075366_10001626 3300006195 Bacteria 11257
67 Ga0075366_10098607 3300006195 Bacteria 1753
68 Ga0075370_10021171 3300006353 Bacteria 3563
69 Ga0075428_100073551 3300006844 Bacteria 3733
70 Ga0075428_100075062 3300006844 Bacteria 3693
71 Ga0075428_100149559 3300006844 Unclassified 2536
72 Ga0075428_100203297 3300006844 Bacteria 2141
73 Ga0075428_100351702 3300006844 Bacteria 1581
74 Ga0075430_100000069 3300006846 Bacteria 55808
75 Ga0075430_100000082 3300006846 Bacteria 53500
76 Ga0075430_100318436 3300006846 Bacteria 1286
77 Ga0075431_100347106 3300006847 Bacteria 1493
78 Ga0075433_10042062 3300006852 Bacteria 3963
79 Ga0075433_10042131 3300006852 Bacteria 3960
80 Ga0075433_10288082 3300006852 Bacteria 1455
81 Ga0075434_100169607 3300006871 Bacteria 2202
82 Ga0075429_100268836 3300006880 Bacteria 1493
83 Ga0068865_100104771 3300006881 Bacteria 2077
84 Ga0099794_10012066 3300007265 Bacteria 3716
85 Ga0111539_10014352 3300009094 Bacteria 9890
86 Ga0111539_10186104 3300009094 Bacteria 2425
87 Ga0111539_10287746 3300009094 Bacteria 1912
88 Ga0111539_10512251 3300009094 Bacteria 1398
89 Ga0105247_10045296 3300009101 Bacteria 2698
90 Ga0114129_10005006 3300009147 Bacteria 18662
91 Ga0114129_10092823 3300009147 Bacteria 4182
92 Ga0114129_10244597 3300009147 Bacteria 2411
93 Ga0114129_10338230 3300009147 Bacteria 1997
94 Ga0163163_10018125 3300014325 Bacteria 6581
95 Ga0163163_10284359 3300014325 Bacteria 1706
96 Ga0182008_10041386 3300014497 Bacteria 2298
97 Ga0157379_10224816 3300014968 Bacteria 1701
98 Ga0209758_1000063 3300025297 Bacteria 315999
99 Ga0207692_10009288 3300025898 Bacteria 4101
100 Ga0207688_10003214 3300025901 Bacteria 8920
101 Ga0207680_10053194 3300025903 Bacteria 2430
102 Ga0207647_10059051 3300025904 Bacteria 2348
103 Ga0207643_10002847 3300025908 Bacteria 9345
104 Ga0207684_10006669 3300025910 Bacteria 10492
105 Ga0207707_10054362 3300025912 Bacteria 3485
106 Ga0207707_10302773 3300025912 Unclassified 1382
107 Ga0207693_10187557 3300025915 Bacteria 1628
108 Ga0207663_10025187 3300025916 Bacteria 3435
109 Ga0207652_10037708 3300025921 Bacteria 4091
110 Ga0207650_10007123 3300025925 Bacteria 7620
111 Ga0207700_10006140 3300025928 Bacteria 7235
112 Ga0207700_10046624 3300025928 Bacteria 3207
113 Ga0207664_10006631 3300025929 Bacteria 7974
114 Ga0207644_10051869 3300025931 Bacteria 2946
115 Ga0207706_10004780 3300025933 Bacteria 12684
116 Ga0207670_10006656 3300025936 Bacteria 6427
117 Ga0207670_10018810 3300025936 Bacteria 4208
118 Ga0207704_10111605 3300025938 Bacteria 1850
119 Ga0207704_10181260 3300025938 Bacteria 1522
120 Ga0207689_10041093 3300025942 Bacteria 3827
121 Ga0207689_10357725 3300025942 Bacteria 1214
122 Ga0207651_10185661 3300025960 Bacteria 1654
123 Ga0207712_10071937 3300025961 Bacteria 2489
124 Ga0207658_10185703 3300025986 Bacteria 1724
125 Ga0207703_10382669 3300026035 Bacteria 1302
126 Ga0207678_10087153 3300026067 Bacteria 2668
127 Ga0207708_10002701 3300026075 Bacteria 13034
128 Ga0207641_10025916 3300026088 Bacteria 4837
129 Ga0207648_10035712 3300026089 Bacteria 4379
130 Ga0207675_100122000 3300026118 Bacteria 2467
131 Ga0207683_10005391 3300026121 Bacteria 10963
132 Ga0207683_10084086 3300026121 Bacteria 2828
133 Ga0207683_10167313 3300026121 Bacteria 1990
134 Ga0207698_10130042 3300026142 Bacteria 2150
135 Ga0207428_10279534 3300027907 Bacteria 1239
136 Ga0268264_10116217 3300028381 Bacteria 2351
137 Ga0268264_10200172 3300028381 Bacteria 1827
138 Ga0268264_10245410 3300028381 Bacteria 1661
139 Ga0265338_10042763 3300028800 Bacteria 4213
140 Ga0265339_10000077 3300031249 Bacteria 84288
141 Ga0373952_0032341 3300035092 Unclassified 1168
142 Ga0373939_0052493 3300035114 Bacteria 1271
143 Ga0373939_0058221 3300035114 Unclassified 1221
144 Ga0373960_0008624 3300035121 Bacteria 2448
145 Ga0373960_0026823 3300035121 Bacteria 1577
146 Ga0373955_0188586 3300035172 Unclassified 1225
147 Ga0373962_0008426 3300035242 Bacteria 2537
148 Ga0373924_0023817 3300035410 Bacteria 2407
149 Ga0373931_0001673 3300035691 Bacteria 9594
150 Ga0373931_0052151 3300035691 Bacteria 2180
151 Ga0373935_0362201 3300035692 Bacteria 1035
152 Ga0373947_0186517 3300035725 Bacteria 1352
153 Ga0373937_0003449 3300036401 Bacteria 13276
154 Ga0373937_0276346 3300036401 Bacteria 1586
155 Ga0373925_0027052 3300037068 Bacteria 4200
156 Ga0395900_0165628 3300037418 Bacteria 2253
157 Ga0395901_0115997 3300038443 Bacteria 2813
158 Ga0436363_0085569 3300039450 Bacteria 5096
159 Ga0495590_0072728 3300046457 Bacteria 1208
160 Ga0495639_0045583 3300046475 Bacteria 1984
161 Ga0495584_0029190 3300046491 Bacteria 2795
162 Ga0495594_0142205 3300046499 Bacteria 1361
163 Ga0495631_0038654 3300046518 Bacteria 2121
164 Ga0495656_0063745 3300046615 Unclassified 1616
165 Ga0495658_0018663 3300046683 Bacteria 3610
166 Ga0495669_0131447 3300046684 Bacteria 1178
167 Ga0495602_0240106 3300048088 Bacteria 1356
168 Ga0496100_0019696 3300048903 Bacteria 4031
169 Ga0496100_0039529 3300048903 Bacteria 2996
170 Ga0496102_0041228 3300048905 Bacteria 4178
171 Ga0496102_0136899 3300048905 Bacteria 2295
172 Ga0496104_0000618 3300048907 Bacteria 30466
173 Ga0496104_0002336 3300048907 Bacteria 16406
174 Ga0496104_0004774 3300048907 Bacteria 11800
175 Ga0496104_0154387 3300048907 Bacteria 2203
176 Ga0496105_0002623 3300048908 Bacteria 13075
177 Ga0496105_0002693 3300048908 Bacteria 12940
178 Ga0496105_0017883 3300048908 Bacteria 5688
179 Ga0496105_0116947 3300048908 Bacteria 2199
180 Ga0496105_0270209 3300048908 Bacteria 1373
181 Ga0496105_0276775 3300048908 Bacteria 1354
182 Ga0496106_0003241 3300048909 Bacteria 12172
183 Ga0496106_0075685 3300048909 Unclassified 2579
184 Ga0496106_0137354 3300048909 Bacteria 1921
185 Ga0496106_0194548 3300048909 Unclassified 1613
186 Ga0496107_0113050 3300048910 Bacteria 1997
187 Ga0496108_0000544 3300048911 Bacteria 29516
188 Ga0496108_0069065 3300048911 Bacteria 2981
189 Ga0496109_0009342 3300048912 Bacteria 8355
190 Ga0496109_0024437 3300048912 Bacteria 5372
191 Ga0496109_0025569 3300048912 Bacteria 5262
192 Ga0496109_0056273 3300048912 Bacteria 3589
193 Ga0496109_0087434 3300048912 Bacteria 2879
194 Ga0496109_0161127 3300048912 Bacteria 2102
195 Ga0496110_0002010 3300048913 Bacteria 15144
196 Ga0496110_0024916 3300048913 Bacteria 5105
197 Ga0496111_0006830 3300048914 Bacteria 7442
198 Ga0496111_0009117 3300048914 Bacteria 6603
199 Ga0496112_0014862 3300048915 Bacteria 7241
200 Ga0496112_0024610 3300048915 Bacteria 5769
201 Ga0496112_0249634 3300048915 Bacteria 1726
202 Ga0496113_0035941 3300048916 Bacteria 3627
203 Ga0496114_0023256 3300048917 Bacteria 5057
204 Ga0496114_0030279 3300048917 Bacteria 4453
205 Ga0496114_0039280 3300048917 Bacteria 3916
206 Ga0496115_0007587 3300048918 Bacteria 7988
207 Ga0496115_0232395 3300048918 Bacteria 1520
208 Ga0501033_0023384 3300049570 Bacteria 4661
209 Ga0501036_0004142 3300049572 Bacteria 11663
210 Ga0501038_0044190 3300049574 Bacteria 3872
211 Ga0501039_0013497 3300049575 Bacteria 6247
212 Ga0501041_0098962 3300049577 Bacteria 1804
213 Ga0501046_0154446 3300049580 Bacteria 1730
214 Ga0501046_0172275 3300049580 Bacteria 1623
215 Ga0501047_0011965 3300049581 Bacteria 8211
216 Ga0501047_0213753 3300049581 Bacteria 1786
217 Ga0501048_0003387 3300049582 Bacteria 12116
218 Ga0501048_0141877 3300049582 Bacteria 1699
219 Ga0501067_0010111 3300049583 Bacteria 5220
220 Ga0501069_0011467 3300049585 Bacteria 4694
221 Ga0501070_0051940 3300049586 Bacteria 3402
222 Ga0501072_0011988 3300049588 Bacteria 6623
223 Ga0501074_0028144 3300049590 Bacteria 4072
224 Ga0501075_0284322 3300049591 Bacteria 1260
225 Ga0501076_0369407 3300049592 Bacteria 1179
226 Ga0501080_0011912 3300049742 Bacteria 7965
227 Ga0501035_0047645 3300049822 Bacteria 3846
228 Ga0501044_0000361 3300049823 Bacteria 56979
229 Ga0501044_0045495 3300049823 Bacteria 4546
230 nmdc:mga03683_77470_c1 3300050489 Bacteria 1430
231 nmdc:mga0yw44_1729_c1 3300050492 Bacteria 8048
232 nmdc:mga0yw44_5092_c1 3300050492 Bacteria 6146
233 nmdc:mga0yw44_80498_c1 3300050492 Bacteria 2040
234 nmdc:mga0k408_32550_c1 3300050493 Bacteria 2978
235 nmdc:mga05p37_316207_c1 3300050507 Bacteria 1849
236 nmdc:mga05p37_50545_c1 3300050507 Bacteria 5112
237 nmdc:mga09592_228185_c1 3300050508 Bacteria 1613
238 nmdc:mga0qj67_112_c1 3300050509 Bacteria 53272
239 nmdc:mga0qj67_378_c1 3300050509 Bacteria 30736
240 nmdc:mga0qj67_65262_c1 3300050509 Bacteria 2898
241 nmdc:mga06r32_69822_c1 3300050510 Unclassified 3396
242 nmdc:mga06r32_78717_c1 3300050510 Bacteria 3205
243 nmdc:mga08y16_109621_c1 3300050511 Bacteria 2874
244 nmdc:mga08y16_133660_c1 3300050511 Bacteria 2578
245 nmdc:mga08y16_187903_c1 3300050511 Bacteria 2143
246 nmdc:mga08y16_82237_c1 3300050511 Bacteria 3357
247 nmdc:mga08y16_95869_c1 3300050511 Bacteria 3090
248 nmdc:mga0n895_173667_c1 3300050512 Bacteria 2186
249 nmdc:mga0rr50_138430_c1 3300050513 Bacteria 1956
250 nmdc:mga0rr50_182441_c1 3300050513 Bacteria 1716
251 nmdc:mga08x19_27879_c1 3300050514 Bacteria 3534
252 nmdc:mga0a205_25954_c1 3300050515 Bacteria 5582
253 nmdc:mga0a205_335583_c1 3300050515 Bacteria 1381
254 nmdc:mga0a205_50179_c1 3300050515 Bacteria 4028
255 Ga0495601_0082722 3300053077 Bacteria 2061
256 Ga0495612_0031457 3300053078 Bacteria 2140
257 Ga0495595_0015482 3300053084 Bacteria 3254
258 Ga0500641_0025144 3300053096 Bacteria 2302
259 Ga0501084_0138110 3300054114 Bacteria 2052
260 Ga0501082_0035324 3300060353 Bacteria 4308
261 Ga0501082_0149673 3300060353 Bacteria 2027
262 Ga0530510_0055608 3300061734 Unclassified 2859
263 Ga0495596_0062527
264 JGI24750J21931_1001418
265 JGI24742J22300_10006969
266 JGI25153J46596_10006517
267 Ga0070676_10293339
268 Ga0070670_100018865
269 Ga0070666_10062738
270 Ga0070680_100367268
271 Ga0068868_100065465
272 Ga0070689_100007067
273 Ga0070689_100014804
274 Ga0070691_10111921
275 Ga0070687_100013608
276 Ga0070661_100184544
277 Ga0070668_100108122
278 Ga0070668_100187708
279 Ga0070669_100072160
280 Ga0070675_100076385
281 Ga0070675_100149502
282 Ga0070671_100219712
283 Ga0070709_10004190
284 Ga0070713_100021161
285 Ga0070711_100038383
286 Ga0070708_100025024
287 Ga0070678_100036349
288 Ga0070678_100074362
289 Ga0070678_100076151
290 Ga0070662_100055853
291 Ga0070681_10008982
292 Ga0070681_10037446
293 Ga0070699_100001574
294 Ga0070679_100030657
295 Ga0070679_100290978
296 Ga0070697_100055486
297 Ga0068853_100128909
298 Ga0070686_100080660
299 Ga0070664_100051307
300 Ga0068854_100060268
301 Ga0068864_100039709
302 Ga0068866_10011233
303 Ga0068861_100029799
304 Ga0068863_100026035
305 Ga0068860_100085323
306 Ga0068860_100176345
307 Ga0081455_10003294
308 Ga0081455_10009583
309 Ga0081455_10076067
310 Ga0081538_10001953
311 Ga0081538_10038363
312 Ga0081538_10048482
313 Ga0081540_1008269
314 Ga0081540_1012675
315 Ga0081540_1021071
316 Ga0081540_1036658
317 Ga0081539_10015684
318 Ga0070717_10012095
319 Ga0075365_10012904
320 Ga0075365_10080045
321 Ga0075364_10087596
322 Ga0075364_10305059
323 Ga0070715_10051775
324 Ga0070716_100036996
325 Ga0070712_100098649
326 Ga0075362_10107870
327 Ga0075369_10055382
328 Ga0075366_10001626
329 Ga0075366_10098607
330 Ga0075370_10021171
331 Ga0075428_100073551
332 Ga0075428_100075062
333 Ga0075428_100149559
334 Ga0075428_100203297
335 Ga0075428_100351702
336 Ga0075430_100000069
337 Ga0075430_100000082
338 Ga0075430_100318436
339 Ga0075431_100347106
340 Ga0075433_10042062
341 Ga0075433_10042131
342 Ga0075433_10288082
343 Ga0075434_100169607
344 Ga0075429_100268836
345 Ga0068865_100104771
346 Ga0099794_10012066
347 Ga0111539_10014352
348 Ga0111539_10186104
349 Ga0111539_10287746
350 Ga0111539_10512251
351 Ga0105247_10045296
352 Ga0114129_10005006
353 Ga0114129_10092823
354 Ga0114129_10244597
355 Ga0114129_10338230
356 Ga0163163_10018125
357 Ga0163163_10284359
358 Ga0182008_10041386
359 Ga0157379_10224816
360 Ga0209758_1000063
361 Ga0207692_10009288
362 Ga0207688_10003214
363 Ga0207680_10053194
364 Ga0207647_10059051
365 Ga0207643_10002847
366 Ga0207684_10006669
367 Ga0207707_10054362
368 Ga0207707_10302773
369 Ga0207693_10187557
370 Ga0207663_10025187
371 Ga0207652_10037708
372 Ga0207650_10007123
373 Ga0207700_10006140
374 Ga0207700_10046624
375 Ga0207664_10006631
376 Ga0207644_10051869
377 Ga0207706_10004780
378 Ga0207670_10006656
379 Ga0207670_10018810
380 Ga0207704_10111605
381 Ga0207704_10181260
382 Ga0207689_10041093
383 Ga0207689_10357725
384 Ga0207651_10185661
385 Ga0207712_10071937
386 Ga0207658_10185703
387 Ga0207703_10382669
388 Ga0207678_10087153
389 Ga0207708_10002701
390 Ga0207641_10025916
391 Ga0207648_10035712
392 Ga0207675_100122000
393 Ga0207683_10005391
394 Ga0207683_10084086
395 Ga0207683_10167313
396 Ga0207698_10130042
397 Ga0207428_10279534
398 Ga0268264_10116217
399 Ga0268264_10200172
400 Ga0268264_10245410
401 Ga0265338_10042763
402 Ga0265339_10000077
403 Ga0373952_0032341
404 Ga0373939_0052493
405 Ga0373939_0058221
406 Ga0373960_0008624
407 Ga0373960_0026823
408 Ga0373955_0188586
409 Ga0373962_0008426
410 Ga0373924_0023817
411 Ga0373931_0001673
412 Ga0373931_0052151
413 Ga0373935_0362201
414 Ga0373947_0186517
415 Ga0373937_0003449
416 Ga0373937_0276346
417 Ga0373925_0027052
418 Ga0395900_0165628
419 Ga0395901_0115997
420 Ga0436363_0085569
421 Ga0495590_0072728
422 Ga0495639_0045583
423 Ga0495584_0029190
424 Ga0495594_0142205
425 Ga0495631_0038654
426 Ga0495656_0063745
427 Ga0495658_0018663
428 Ga0495669_0131447
429 Ga0495602_0240106
430 Ga0496100_0019696
431 Ga0496100_0039529
432 Ga0496102_0041228
433 Ga0496102_0136899
434 Ga0496104_0000618
435 Ga0496104_0002336
436 Ga0496104_0004774
437 Ga0496104_0154387
438 Ga0496105_0002623
439 Ga0496105_0002693
440 Ga0496105_0017883
441 Ga0496105_0116947
442 Ga0496105_0270209
443 Ga0496105_0276775
444 Ga0496106_0003241
445 Ga0496106_0075685
446 Ga0496106_0137354
447 Ga0496106_0194548
448 Ga0496107_0113050
449 Ga0496108_0000544
450 Ga0496108_0069065
451 Ga0496109_0009342
452 Ga0496109_0024437
453 Ga0496109_0025569
454 Ga0496109_0056273
455 Ga0496109_0087434
456 Ga0496109_0161127
457 Ga0496110_0002010
458 Ga0496110_0024916
459 Ga0496111_0006830
460 Ga0496111_0009117
461 Ga0496112_0014862
462 Ga0496112_0024610
463 Ga0496112_0249634
464 Ga0496113_0035941
465 Ga0496114_0023256
466 Ga0496114_0030279
467 Ga0496114_0039280
468 Ga0496115_0007587
469 Ga0496115_0232395
470 Ga0501033_0023384
471 Ga0501036_0004142
472 Ga0501038_0044190
473 Ga0501039_0013497
474 Ga0501041_0098962
475 Ga0501046_0154446
476 Ga0501046_0172275
477 Ga0501047_0011965
478 Ga0501047_0213753
479 Ga0501048_0003387
480 Ga0501048_0141877
481 Ga0501067_0010111
482 Ga0501069_0011467
483 Ga0501070_0051940
484 Ga0501072_0011988
485 Ga0501074_0028144
486 Ga0501075_0284322
487 Ga0501076_0369407
488 Ga0501080_0011912
489 Ga0501035_0047645
490 Ga0501044_0000361
491 Ga0501044_0045495
492 nmdc:mga03683_77470_c1
493 nmdc:mga0yw44_1729_c1
494 nmdc:mga0yw44_5092_c1
495 nmdc:mga0yw44_80498_c1
496 nmdc:mga0k408_32550_c1
497 nmdc:mga05p37_316207_c1
498 nmdc:mga05p37_50545_c1
499 nmdc:mga09592_228185_c1
500 nmdc:mga0qj67_112_c1
501 nmdc:mga0qj67_378_c1
502 nmdc:mga0qj67_65262_c1
503 nmdc:mga06r32_69822_c1
504 nmdc:mga06r32_78717_c1
505 nmdc:mga08y16_109621_c1
506 nmdc:mga08y16_133660_c1
507 nmdc:mga08y16_187903_c1
508 nmdc:mga08y16_82237_c1
509 nmdc:mga08y16_95869_c1
510 nmdc:mga0n895_173667_c1
511 nmdc:mga0rr50_138430_c1
512 nmdc:mga0rr50_182441_c1
513 nmdc:mga08x19_27879_c1
514 nmdc:mga0a205_25954_c1
515 nmdc:mga0a205_335583_c1
516 nmdc:mga0a205_50179_c1
517 Ga0495601_0082722
518 Ga0495612_0031457
519 Ga0495595_0015482
520 Ga0500641_0025144
521 Ga0501084_0138110
522 Ga0501082_0035324
523 Ga0501082_0149673
524 Ga0530510_0055608

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

95

379

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
2f5x-assembly3.cif.gz_C structure of periplasmic binding protein bugd 0.7984 36 337
8hkb-assembly1.cif.gz_A tpa bound-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis mutant k184d 0.7954 34 337
2dvz-assembly1.cif.gz_A structure of a periplasmic transporter 0.7832 36 335
2f5x-assembly3.cif.gz_C structure of periplasmic binding protein bugd 0.7745 36 337
8hkb-assembly1.cif.gz_A tpa bound-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis mutant k184d 0.765 34 337
ID Description Score Start End Superfamily
4x9tA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.8253 36 333 3.40.190.150
6hkeC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.798 133 247 3.40.190.10
2f5xC01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.7962 36 337 3.40.190.150
4x9tA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7949 133 243 3.40.190.10
4x9tA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.7927 36 333 3.40.190.150
ID Description Score Start End GO Terms
AF-A0A6N7GSQ6-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9833 20 341 GO:0016020
AF-A0A6N7GYC4-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9712 23 344
AF-A0A537T587-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9704 15 340
AF-A0A7C4XL63-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9671 21 340
AF-A0A524HTS2-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9671 24 339

Map