F370646

General Info

Members Datasets Scaffolds Average Seq Length
261 203 236 297

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0176803|Ga0501034_0176803_467_1486
Length 339
Sequence MTQTGFSRAAEAVLAPEVEHDGEPLLDGRSRLISWRGRRRADSLLASDRSIISSAERRQPGVRRTMRGVHVFLTVSLVVVGLGPILWLAKSAVTPTQDTLQQPFRLWPNGIDWANLSTAWNDIHIDQYFFNTVVIAAGAWVFQLLIATTGAYTLSILRPRYAGLLNSLVLATLFIPGVVLLVPLYLTIVDPPLLGRDYSLLNNYLAVWLPMAANAFNILLVKRFFDNLPRDVIEAARTDGAGPFRLFWSIVIPMSKPILGVVSVFAIIAAWKDFLWPMLVLPDPARQPLSVRLPAVQSQTELDVFLAALAIATIIPVVMFLMFQRVFLRSAGLGGAVKG

Samples

Sample ID Description Type Environment
1 2643221549 Agromyces sp. Root1464 Isolate Unclassified
2 2643221575 Microbacterium sp. Root61 Isolate Unclassified
3 2643221597 Microbacterium sp. Root180 Isolate Unclassified
4 2643221615 Nocardioides sp. Root224 Isolate Unclassified
5 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
6 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
7 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
8 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
9 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
10 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
11 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
12 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
13 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
14 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
15 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
16 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
17 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
18 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
19 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
20 3300001978 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6 Metagenome Rhizosphere
21 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
22 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
23 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
24 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
25 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
26 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
27 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
28 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
29 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
30 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
31 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
32 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
33 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
34 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
35 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
36 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
37 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
38 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
39 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
40 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
41 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
42 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
43 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
44 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
45 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
46 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
47 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
48 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
49 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
50 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
51 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
52 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
53 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
54 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
55 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
56 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
57 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
58 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
59 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
60 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
61 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
62 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
63 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
64 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
65 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
68 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
69 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
71 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
72 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
73 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
74 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
75 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
76 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
77 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
78 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
79 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
80 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
81 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
82 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
83 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
84 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
85 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
86 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
87 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
88 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
124 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
125 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
126 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
127 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
128 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
129 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
130 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
131 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
132 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
133 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
134 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
135 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
136 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
137 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
138 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
139 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
140 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
141 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
142 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
143 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
144 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
145 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
146 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
147 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
148 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
149 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
150 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
151 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
152 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
153 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
154 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
155 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
156 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
157 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
158 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
159 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
160 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
161 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
162 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
163 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
164 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
165 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
166 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
167 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
168 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
169 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
170 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
171 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
172 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
173 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
174 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
175 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
176 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
177 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
178 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
188 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
189 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
191 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
192 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
193 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
194 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
195 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
196 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
197 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
198 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
199 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
200 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
201 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
202 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere
203 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.42
Metatranscriptomes 0
Isolates 9.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.77
Nodule 0
Rhizoplane 11.11
Rhizosphere 77.39
Stem 0
Stem Tuber 0
Unclassified 10.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24747J21853_1000431 3300001978 Bacteria 2557
2 Ga0070690_100003266 3300005330 Bacteria 8856
3 Ga0070682_100010109 3300005337 Bacteria 5348
4 Ga0070660_100193050 3300005339 Bacteria 1650
5 Ga0070689_100063302 3300005340 Bacteria 2878
6 Ga0070687_100038528 3300005343 Bacteria 2397
7 Ga0070692_10023647 3300005345 Bacteria 3012
8 Ga0070669_100374372 3300005353 Bacteria 1160
9 Ga0070674_100014546 3300005356 Bacteria 4894
10 Ga0070659_100005531 3300005366 Bacteria 9078
11 Ga0070709_10006224 3300005434 Bacteria 6494
12 Ga0070709_10038633 3300005434 Bacteria 2924
13 Ga0070714_100090923 3300005435 Bacteria 2674
14 Ga0070713_100160581 3300005436 Bacteria 2006
15 Ga0070710_10001205 3300005437 Bacteria 12244
16 Ga0070701_10002750 3300005438 Bacteria 6822
17 Ga0070711_100003262 3300005439 Bacteria 9434
18 Ga0070711_100129863 3300005439 Bacteria 1875
19 Ga0070694_100010207 3300005444 Bacteria 5782
20 Ga0070708_100167526 3300005445 Bacteria 2050
21 Ga0070678_100003009 3300005456 Bacteria 9341
22 Ga0070662_100458249 3300005457 Bacteria 1059
23 Ga0070685_10002295 3300005466 Bacteria 9875
24 Ga0070706_100001594 3300005467 Bacteria 23644
25 Ga0070706_100080258 3300005467 Bacteria 3021
26 Ga0070706_100090457 3300005467 Bacteria 2838
27 Ga0070706_100135198 3300005467 Bacteria 2301
28 Ga0070707_100001665 3300005468 Bacteria 21503
29 Ga0070707_100061348 3300005468 Bacteria 3606
30 Ga0070698_100061770 3300005471 Bacteria 3781
31 Ga0070698_100061885 3300005471 Bacteria 3777
32 Ga0070699_100003403 3300005518 Bacteria 14075
33 Ga0070699_100067213 3300005518 Bacteria 3112
34 Ga0070697_100332171 3300005536 Bacteria 1310
35 Ga0068853_100012266 3300005539 Bacteria 6969
36 Ga0068853_100016383 3300005539 Bacteria 6099
37 Ga0070672_100188845 3300005543 Bacteria 1719
38 Ga0070686_100007986 3300005544 Bacteria 5914
39 Ga0070695_100059717 3300005545 Bacteria 2470
40 Ga0070696_100070867 3300005546 Bacteria 2452
41 Ga0070693_100013222 3300005547 Bacteria 4200
42 Ga0070665_100056629 3300005548 Bacteria 3930
43 Ga0068855_100172990 3300005563 Bacteria 2445
44 Ga0068856_100018086 3300005614 Bacteria 6833
45 Ga0068856_100526963 3300005614 Bacteria 1203
46 Ga0068852_100022800 3300005616 Bacteria 5027
47 Ga0068859_100390286 3300005617 Bacteria 1488
48 Ga0068866_10004905 3300005718 Bacteria 5498
49 Ga0068862_100269403 3300005844 Bacteria 1557
50 Ga0070717_10236482 3300006028 Bacteria 1610
51 Ga0075365_10003471 3300006038 Bacteria 8130
52 Ga0070716_100161667 3300006173 Bacteria 1452
53 Ga0070712_100026093 3300006175 Bacteria 3888
54 Ga0097621_100043050 3300006237 Bacteria 3639
55 Ga0068871_100006274 3300006358 Bacteria 8389
56 Ga0075431_100277825 3300006847 Bacteria 1696
57 Ga0097620_100390287 3300006931 Bacteria 1488
58 Ga0105245_10055591 3300009098 Bacteria 3556
59 Ga0105247_10006336 3300009101 Bacteria 7330
60 Ga0105247_10203634 3300009101 Bacteria 1331
61 Ga0114129_10017782 3300009147 Bacteria 10123
62 Ga0114129_10113298 3300009147 Bacteria 3740
63 Ga0114129_10448662 3300009147 Bacteria 1692
64 Ga0105243_10022923 3300009148 Bacteria 4747
65 Ga0105241_10025745 3300009174 Bacteria 4373
66 Ga0105241_10217616 3300009174 Bacteria 1603
67 Ga0105242_10023443 3300009176 Bacteria 4863
68 Ga0105242_10437025 3300009176 Bacteria 1230
69 Ga0105248_10012282 3300009177 Bacteria 9447
70 Ga0105238_10102516 3300009551 Bacteria 2843
71 Ga0105238_10285721 3300009551 Bacteria 1631
72 Ga0105249_10004170 3300009553 Bacteria 12482
73 Ga0105239_10007722 3300010375 Bacteria 12311
74 Ga0105239_10040584 3300010375 Bacteria 5099
75 Ga0105246_10069964 3300011119 Bacteria 2467
76 Ga0157373_10247219 3300013100 Bacteria 1261
77 Ga0157369_10231679 3300013105 Bacteria 1931
78 Ga0171462_1002 3300013250 Bacteria 1052134
79 Ga0157374_10016126 3300013296 Bacteria 6565
80 Ga0157378_10058948 3300013297 Bacteria 3424
81 Ga0163162_10010364 3300013306 Bacteria 9059
82 Ga0157375_10209618 3300013308 Bacteria 2106
83 Ga0157375_10489073 3300013308 Bacteria 1395
84 Ga0157380_10003715 3300014326 Bacteria 10495
85 Ga0157377_10013947 3300014745 Bacteria 4080
86 Ga0157376_10092833 3300014969 Bacteria 2618
87 Ga0207653_10078130 3300025885 Bacteria 1141
88 Ga0207692_10093633 3300025898 Bacteria 1634
89 Ga0207710_10068834 3300025900 Bacteria 1619
90 Ga0207647_10073433 3300025904 Bacteria 2061
91 Ga0207685_10156640 3300025905 Bacteria 1036
92 Ga0207699_10056181 3300025906 Bacteria 2345
93 Ga0207684_10000143 3300025910 Bacteria 127272
94 Ga0207684_10123627 3300025910 Bacteria 2219
95 Ga0207654_10058560 3300025911 Bacteria 2243
96 Ga0207693_10003183 3300025915 Bacteria 14101
97 Ga0207663_10065347 3300025916 Bacteria 2325
98 Ga0207660_10127284 3300025917 Bacteria 1936
99 Ga0207657_10247518 3300025919 Bacteria 1422
100 Ga0207652_10208526 3300025921 Bacteria 1759
101 Ga0207646_10003371 3300025922 Bacteria 18087
102 Ga0207646_10004068 3300025922 Bacteria 16133
103 Ga0207681_10231638 3300025923 Bacteria 1434
104 Ga0207700_10128303 3300025928 Bacteria 2067
105 Ga0207664_10066379 3300025929 Bacteria 2892
106 Ga0207706_10482323 3300025933 Bacteria 1071
107 Ga0207686_10011398 3300025934 Bacteria 4868
108 Ga0207686_10465861 3300025934 Bacteria 975
109 Ga0207709_10002506 3300025935 Bacteria 11485
110 Ga0207670_10253496 3300025936 Bacteria 1361
111 Ga0207704_10027703 3300025938 Bacteria 3131
112 Ga0207665_10013119 3300025939 Bacteria 5447
113 Ga0207711_10144692 3300025941 Bacteria 2141
114 Ga0207651_10161101 3300025960 Bacteria 1759
115 Ga0207712_10037692 3300025961 Bacteria 3300
116 Ga0207668_10385792 3300025972 Bacteria 1180
117 Ga0207639_10003907 3300026041 Bacteria 10052
118 Ga0207639_10021710 3300026041 Bacteria 4614
119 Ga0207678_10021100 3300026067 Bacteria 5709
120 Ga0207678_10077364 3300026067 Bacteria 2850
121 Ga0207708_10000316 3300026075 Bacteria 38103
122 Ga0207675_100023728 3300026118 Bacteria 5707
123 Ga0207683_10005973 3300026121 Bacteria 10426
124 Ga0207683_10119303 3300026121 Bacteria 2367
125 Ga0207698_10023509 3300026142 Bacteria 4307
126 Ga0268266_10034571 3300028379 Bacteria 4299
127 Ga0268264_10073742 3300028381 Bacteria 2898
128 Ga0265326_10005892 3300028558 Bacteria 3841
129 Ga0265319_1008031 3300028563 Bacteria 4668
130 Ga0307515_10075186 3300028794 Bacteria 4505
131 Ga0265338_10001442 3300028800 Bacteria 38606
132 Ga0265338_10120568 3300028800 Bacteria 2091
133 Ga0307511_10001882 3300030521 Bacteria 22034
134 Ga0314311_1008163 3300030733 Bacteria 1809
135 Ga0316179_1105349 3300030734 Bacteria 2778
136 Ga0265332_10016733 3300031238 Bacteria 3236
137 Ga0307513_10135688 3300031456 Bacteria 2397
138 Ga0307413_10216992 3300031824 Bacteria 1394
139 Ga0307407_10187219 3300031903 Bacteria 1377
140 Ga0307507_10120831 3300033179 Bacteria 2096
141 Ga0395899_0002166 3300037312 Bacteria 16131
142 Ga0395899_0005883 3300037312 Bacteria 9519
143 Ga0395900_0013600 3300037418 Bacteria 8312
144 Ga0395900_0030304 3300037418 Bacteria 5554
145 Ga0395898_0046941 3300037466 Bacteria 4240
146 Ga0395898_0094288 3300037466 Bacteria 2876
147 Ga0395905_0021604 3300037471 Bacteria 6086
148 Ga0395905_0031864 3300037471 Bacteria 4960
149 Ga0395901_0014461 3300038443 Bacteria 8028
150 Ga0395901_0018711 3300038443 Bacteria 7075
151 Ga0439465_0009417 3300041413 Bacteria 3077
152 Ga0451853_1059131 3300041512 Bacteria 876
153 Ga0466965_0002584 3300044683 Bacteria 7740
154 Ga0466965_0010869 3300044683 Bacteria 4259
155 Ga0466965_0056564 3300044683 Bacteria 1954
156 Ga0466961_0107036 3300044693 Bacteria 1760
157 Ga0466963_0313206 3300044694 Bacteria 1104
158 Ga0466968_0075508 3300044735 Bacteria 1474
159 Ga0466970_0063477 3300044765 Bacteria 1980
160 Ga0466960_0002627 3300044901 Bacteria 6768
161 Ga0466960_0046710 3300044901 Bacteria 2074
162 Ga0466960_0150320 3300044901 Bacteria 1244
163 Ga0466967_0032494 3300045976 Bacteria 4407
164 Ga0466967_0052812 3300045976 Bacteria 3570
165 Ga0495627_000238 3300046453 Bacteria 57919
166 Ga0495629_0100355 3300046459 Bacteria 2020
167 Ga0495629_0138915 3300046459 Bacteria 1691
168 Ga0495582_0106349 3300046473 Bacteria 1574
169 Ga0495585_0033298 3300046492 Bacteria 2918
170 Ga0495607_0186951 3300046501 Bacteria 1035
171 Ga0495652_0164045 3300046529 Bacteria 1722
172 Ga0495598_0094857 3300046537 Bacteria 979
173 Ga0495659_0026055 3300046664 Bacteria 2006
174 Ga0495684_0061120 3300047471 Bacteria 2867
175 Ga0496100_0003070 3300048903 Bacteria 8633
176 Ga0496100_0104938 3300048903 Bacteria 1954
177 Ga0496101_0086208 3300048904 Bacteria 2328
178 Ga0496101_0110041 3300048904 Bacteria 2073
179 Ga0496103_0009926 3300048906 Bacteria 5631
180 Ga0496103_0013749 3300048906 Bacteria 4804
181 Ga0496104_0013706 3300048907 Bacteria 7310
182 Ga0496104_0189752 3300048907 Bacteria 1966
183 Ga0496104_0235238 3300048907 Bacteria 1744
184 Ga0496105_0007298 3300048908 Bacteria 8538
185 Ga0496105_0031002 3300048908 Bacteria 4383
186 Ga0496106_0014978 3300048909 Bacteria 5736
187 Ga0496106_0363835 3300048909 Bacteria 1162
188 Ga0496107_0271353 3300048910 Bacteria 1262
189 Ga0496108_0042850 3300048911 Bacteria 3779
190 Ga0496108_0108567 3300048911 Bacteria 2371
191 Ga0496109_0002734 3300048912 Bacteria 14791
192 Ga0496109_0098177 3300048912 Bacteria 2715
193 Ga0496109_0148321 3300048912 Bacteria 2195
194 Ga0496110_0027795 3300048913 Bacteria 4852
195 Ga0496111_0004267 3300048914 Bacteria 9010
196 Ga0496111_0078767 3300048914 Bacteria 2403
197 Ga0496112_0047689 3300048915 Bacteria 4202
198 Ga0496112_0314776 3300048915 Bacteria 1510
199 Ga0496113_0081900 3300048916 Bacteria 2475
200 Ga0496113_0226199 3300048916 Bacteria 1491
201 Ga0496113_0243797 3300048916 Bacteria 1434
202 Ga0496114_0004393 3300048917 Bacteria 10928
203 Ga0496115_0002163 3300048918 Bacteria 14059
204 Ga0496118_0065244 3300048921 Bacteria 2665
205 Ga0496119_0002517 3300048922 Bacteria 20010
206 Ga0496122_0034897 3300048925 Bacteria 4106
207 Ga0496122_0035961 3300048925 Bacteria 4017
208 Ga0496125_0001667 3300048928 Bacteria 31185
209 Ga0496125_0040032 3300048928 Bacteria 4026
210 Ga0496126_0226666 3300048929 Bacteria 1567
211 Ga0501031_0082335 3300049568 Bacteria 2098
212 Ga0501034_0075542 3300049571 Bacteria 3376
213 Ga0501034_0176803 3300049571 Bacteria 2100
214 Ga0501034_0182174 3300049571 Bacteria 2065
215 Ga0501034_0219671 3300049571 Bacteria 1853
216 Ga0501036_0140644 3300049572 Bacteria 2037
217 Ga0501039_0012932 3300049575 Bacteria 6382
218 Ga0501042_0029406 3300049578 Bacteria 3875
219 Ga0501043_0009203 3300049579 Bacteria 7763
220 Ga0501046_0005893 3300049580 Bacteria 10924
221 Ga0501047_0013398 3300049581 Bacteria 7772
222 Ga0501048_0119687 3300049582 Bacteria 1860
223 Ga0501070_0003449 3300049586 Bacteria 13706
224 Ga0501080_0272179 3300049742 Bacteria 1541
225 Ga0501035_0018164 3300049822 Bacteria 6479
226 Ga0501035_0261123 3300049822 Bacteria 1468
227 Ga0501044_0025972 3300049823 Bacteria 6204
228 nmdc:mga05p37_45301_c1 3300050507 Bacteria 5411
229 nmdc:mga05p37_496094_c1 3300050507 Bacteria 1403
230 nmdc:mga08y16_23710_c1 3300050511 Bacteria 6479
231 nmdc:mga0n895_590881_c1 3300050512 Bacteria 1113
232 nmdc:mga0a205_100212_c1 3300050515 Bacteria 2795
233 nmdc:mga0a205_161847_c1 3300050515 Bacteria 2134
234 Ga0495601_0089993 3300053077 Bacteria 1974
235 Ga0500593_000263 3300053117 Bacteria 21458
236 Ga0501082_0028037 3300060353 Bacteria 4850

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044693 Ga0466961_0107036 Ga0466961_0107036_29_733 234
2 3300005543 Ga0070672_100188845 Ga0070672_1001888451 253
3 3300044683 Ga0466965_0002584 Ga0466965_0002584_742_1602 259
4 3300044901 Ga0466960_0002627 Ga0466960_0002627_5391_6251 261
5 3300048909 Ga0496106_0363835 Ga0496106_0363835_344_1141 265
6 3300037312 Ga0395899_0005883 Ga0395899_0005883_4419_5339 267
7 3300037418 Ga0395900_0013600 Ga0395900_0013600_6749_7669 267
8 3300037466 Ga0395898_0094288 Ga0395898_0094288_725_1645 267
9 3300037471 Ga0395905_0021604 Ga0395905_0021604_4937_5857 267
10 3300038443 Ga0395901_0014461 Ga0395901_0014461_516_1436 267
11 3300009176 Ga0105242_10437025 Ga0105242_104370252 268
12 3300044901 Ga0466960_0150320 Ga0466960_0150320_403_1215 270
13 3300028800 Ga0265338_10120568 Ga0265338_101205683 271
14 3300005467 Ga0070706_100001594 Ga0070706_10000159412 272
15 3300005468 Ga0070707_100061348 Ga0070707_1000613483 272
16 3300009101 Ga0105247_10203634 Ga0105247_102036341 272
17 3300009174 Ga0105241_10217616 Ga0105241_102176162 272
18 3300025910 Ga0207684_10000143 Ga0207684_10000143100 272
19 3300025922 Ga0207646_10004068 Ga0207646_1000406813 272
20 3300025929 Ga0207664_10066379 Ga0207664_100663792 272
21 3300041512 Ga0451853_1059131 Ga0451853_1059131_35_856 272
22 3300046473 Ga0495582_0106349 Ga0495582_0106349_11_829 272
23 3300046537 Ga0495598_0094857 Ga0495598_0094857_26_847 272
24 3300048906 Ga0496103_0013749 Ga0496103_0013749_1504_2322 272
25 3300048916 Ga0496113_0226199 Ga0496113_0226199_496_1314 272
26 3300060353 Ga0501082_0028037 Ga0501082_0028037_4013_4837 272
27 3300030733 Ga0314311_1008163 Ga0314311_10081631 275
28 3300030734 Ga0316179_1105349 Ga0316179_11053492 275
29 3300005356 Ga0070674_100014546 Ga0070674_1000145464 276
30 3300005546 Ga0070696_100070867 Ga0070696_1000708672 276
31 3300025934 Ga0207686_10465861 Ga0207686_104658611 276
32 3300005467 Ga0070706_100135198 Ga0070706_1001351982 277
33 3300005471 Ga0070698_100061770 Ga0070698_1000617703 277
34 3300045976 Ga0466967_0032494 Ga0466967_0032494_2803_3696 282
35 iso_pu_bacteria 2751185734 2753076840 282
36 iso_pu_bacteria 2870721527 2870724915 282
37 iso_pu_bacteria 8047710418 8047716719 283
38 3300048904 Ga0496101_0110041 Ga0496101_0110041_815_1771 284
39 3300048907 Ga0496104_0235238 Ga0496104_0235238_673_1584 284
40 3300048912 Ga0496109_0098177 Ga0496109_0098177_460_1371 284
41 3300048913 Ga0496110_0027795 Ga0496110_0027795_3043_3954 284
42 3300048914 Ga0496111_0004267 Ga0496111_0004267_6587_7498 284
43 iso_pu_bacteria 2773857762 2774393028 285
44 iso_pu_bacteria 2811994878 2812350990 285
45 iso_pu_bacteria 2891968417 2891971441 285
46 3300005539 Ga0068853_100012266 Ga0068853_1000122662 286
47 3300009551 Ga0105238_10102516 Ga0105238_101025162 286
48 3300026041 Ga0207639_10003907 Ga0207639_100039074 286
49 3300028563 Ga0265319_1008031 Ga0265319_10080313 286
50 3300028794 Ga0307515_10075186 Ga0307515_100751863 286
51 3300030521 Ga0307511_10001882 Ga0307511_1000188211 286
52 3300031238 Ga0265332_10016733 Ga0265332_100167333 286
53 3300033179 Ga0307507_10120831 Ga0307507_101208312 286
54 3300041413 Ga0439465_0009417 Ga0439465_0009417_1292_2275 286
55 3300053117 Ga0500593_000263 Ga0500593_000263_18648_19622 286
56 3300046453 Ga0495627_000238 Ga0495627_000238_37446_38405 287
57 3300047471 Ga0495684_0061120 Ga0495684_0061120_23_886 287
58 3300048921 Ga0496118_0065244 Ga0496118_0065244_886_1821 287
59 3300048925 Ga0496122_0034897 Ga0496122_0034897_1000_1959 287
60 3300048925 Ga0496122_0035961 Ga0496122_0035961_676_1623 287
61 3300048928 Ga0496125_0001667 Ga0496125_0001667_11777_12724 287
62 3300048928 Ga0496125_0040032 Ga0496125_0040032_2197_3156 287
63 3300049571 Ga0501034_0075542 Ga0501034_0075542_626_1645 287
64 3300005467 Ga0070706_100090457 Ga0070706_1000904573 289
65 3300005468 Ga0070707_100001665 Ga0070707_1000016652 289
66 3300005471 Ga0070698_100061885 Ga0070698_1000618853 289
67 3300005518 Ga0070699_100003403 Ga0070699_1000034037 289
68 3300005536 Ga0070697_100332171 Ga0070697_1003321711 289
69 3300025910 Ga0207684_10123627 Ga0207684_101236271 289
70 3300025922 Ga0207646_10003371 Ga0207646_100033716 289
71 3300045976 Ga0466967_0052812 Ga0466967_0052812_1563_2432 289
72 3300048903 Ga0496100_0104938 Ga0496100_0104938_146_1084 289
73 3300048911 Ga0496108_0108567 Ga0496108_0108567_279_1217 289
74 3300048916 Ga0496113_0243797 Ga0496113_0243797_391_1314 289
75 iso_pu_bacteria 2945968032 2945970392 289
76 3300049571 Ga0501034_0182174 Ga0501034_0182174_139_1158 290
77 3300010375 Ga0105239_10040584 Ga0105239_100405844 291
78 3300048912 Ga0496109_0148321 Ga0496109_0148321_798_1736 291
79 iso_pu_bacteria 2758568621 2760622640 291
80 iso_pu_bacteria 2857733635 2857733639 291
81 3300013308 Ga0157375_10489073 Ga0157375_104890732 292
82 3300031824 Ga0307413_10216992 Ga0307413_102169922 292
83 3300031903 Ga0307407_10187219 Ga0307407_101872192 292
84 3300044694 Ga0466963_0313206 Ga0466963_0313206_207_1085 292
85 3300044735 Ga0466968_0075508 Ga0466968_0075508_233_1219 292
86 3300044765 Ga0466970_0063477 Ga0466970_0063477_901_1800 292
87 3300046492 Ga0495585_0033298 Ga0495585_0033298_784_1662 292
88 3300049568 Ga0501031_0082335 Ga0501031_0082335_371_1252 292
89 3300049572 Ga0501036_0140644 Ga0501036_0140644_504_1385 292
90 3300049575 Ga0501039_0012932 Ga0501039_0012932_156_1037 292
91 3300049578 Ga0501042_0029406 Ga0501042_0029406_24_905 292
92 3300049579 Ga0501043_0009203 Ga0501043_0009203_823_1704 292
93 3300049581 Ga0501047_0013398 Ga0501047_0013398_5382_6263 292
94 3300049582 Ga0501048_0119687 Ga0501048_0119687_943_1824 292
95 3300049742 Ga0501080_0272179 Ga0501080_0272179_79_960 292
96 3300049822 Ga0501035_0018164 Ga0501035_0018164_3726_4607 292
97 3300049823 Ga0501044_0025972 Ga0501044_0025972_3151_4032 292
98 iso_pu_bacteria 2643221575 2643886837 292
99 iso_pu_bacteria 2758568522 2760303516 292
100 3300006028 Ga0070717_10236482 Ga0070717_102364822 293
101 3300037312 Ga0395899_0002166 Ga0395899_0002166_5174_6058 293
102 3300037418 Ga0395900_0030304 Ga0395900_0030304_2211_3095 293
103 3300037466 Ga0395898_0046941 Ga0395898_0046941_219_1103 293
104 3300037471 Ga0395905_0031864 Ga0395905_0031864_611_1495 293
105 3300038443 Ga0395901_0018711 Ga0395901_0018711_2211_3095 293
106 3300044683 Ga0466965_0056564 Ga0466965_0056564_478_1464 293
107 3300044901 Ga0466960_0046710 Ga0466960_0046710_115_1101 293
108 3300048922 Ga0496119_0002517 Ga0496119_0002517_1067_2053 293
109 3300049586 Ga0501070_0003449 Ga0501070_0003449_11692_12678 293
110 3300050512 nmdc:mga0n895_590881_c1 nmdc:mga0n895_590881_c1_174_1097 293
111 3300050515 nmdc:mga0a205_100212_c1 nmdc:mga0a205_100212_c1_515_1399 293
112 iso_pu_bacteria 2643221549 2643766805 293
113 iso_pu_bacteria 2643221597 2643996955 293
114 iso_pu_bacteria 2852663356 2852667180 293
115 iso_pu_bacteria 2857723135 2857727058 293
116 iso_pu_bacteria 2919443155 2919444308 293
117 iso_pu_bacteria 2946080515 2946082299 293
118 iso_pu_bacteria 8004182704 8004184359 293
119 iso_pu_bacteria 8045830549 8045833752 293
120 iso_pu_bacteria 8046352972 8046354935 293
121 3300048929 Ga0496126_0226666 Ga0496126_0226666_568_1506 295
122 iso_pu_bacteria 2643221615 2644089065 295
123 iso_pu_bacteria 2643221657 2644318910 295
124 iso_pu_bacteria 2738541272 2738692379 295
125 3300005434 Ga0070709_10038633 Ga0070709_100386332 296
126 3300005435 Ga0070714_100090923 Ga0070714_1000909232 296
127 3300005445 Ga0070708_100167526 Ga0070708_1001675262 296
128 3300005467 Ga0070706_100080258 Ga0070706_1000802581 296
129 3300005518 Ga0070699_100067213 Ga0070699_1000672134 296
130 3300006847 Ga0075431_100277825 Ga0075431_1002778252 296
131 3300013250 Ga0171462_1002 Ga0171462_1002659 296
132 3300025900 Ga0207710_10068834 Ga0207710_100688342 296
133 3300025906 Ga0207699_10056181 Ga0207699_100561812 296
134 3300026067 Ga0207678_10077364 Ga0207678_100773643 296
135 3300026121 Ga0207683_10119303 Ga0207683_101193032 296
136 3300028558 Ga0265326_10005892 Ga0265326_100058923 296
137 3300028800 Ga0265338_10001442 Ga0265338_1000144240 296
138 3300031456 Ga0307513_10135688 Ga0307513_101356882 296
139 3300044683 Ga0466965_0010869 Ga0466965_0010869_618_1550 296
140 3300046459 Ga0495629_0100355 Ga0495629_0100355_815_1705 296
141 3300046459 Ga0495629_0138915 Ga0495629_0138915_174_1064 296
142 3300046529 Ga0495652_0164045 Ga0495652_0164045_474_1376 296
143 3300048915 Ga0496112_0314776 Ga0496112_0314776_202_1122 296
144 3300049571 Ga0501034_0176803 Ga0501034_0176803_467_1486 296
145 3300049571 Ga0501034_0219671 Ga0501034_0219671_790_1716 296
146 3300049580 Ga0501046_0005893 Ga0501046_0005893_4530_5498 296
147 3300049822 Ga0501035_0261123 Ga0501035_0261123_41_1009 296
148 3300050511 nmdc:mga08y16_23710_c1 nmdc:mga08y16_23710_c1_3488_4411 296
149 3300050515 nmdc:mga0a205_161847_c1 nmdc:mga0a205_161847_c1_107_1042 296
150 3300053077 Ga0495601_0089993 Ga0495601_0089993_145_1065 296
151 iso_pu_bacteria 8056579771 8056584127 296
152 iso_pu_bacteria 8057345674 8057346425 296
153 3300001978 JGI24747J21853_1000431 JGI24747J21853_10004312 297
154 3300005330 Ga0070690_100003266 Ga0070690_1000032661 297
155 3300005337 Ga0070682_100010109 Ga0070682_1000101091 297
156 3300005339 Ga0070660_100193050 Ga0070660_1001930501 297
157 3300005340 Ga0070689_100063302 Ga0070689_1000633021 297
158 3300005343 Ga0070687_100038528 Ga0070687_1000385283 297
159 3300005345 Ga0070692_10023647 Ga0070692_100236472 297
160 3300005353 Ga0070669_100374372 Ga0070669_1003743721 297
161 3300005366 Ga0070659_100005531 Ga0070659_1000055313 297
162 3300005434 Ga0070709_10006224 Ga0070709_100062243 297
163 3300005436 Ga0070713_100160581 Ga0070713_1001605812 297
164 3300005437 Ga0070710_10001205 Ga0070710_100012054 297
165 3300005438 Ga0070701_10002750 Ga0070701_100027502 297
166 3300005439 Ga0070711_100003262 Ga0070711_1000032625 297
167 3300005439 Ga0070711_100129863 Ga0070711_1001298632 297
168 3300005444 Ga0070694_100010207 Ga0070694_1000102072 297
169 3300005456 Ga0070678_100003009 Ga0070678_1000030094 297
170 3300005457 Ga0070662_100458249 Ga0070662_1004582491 297
171 3300005466 Ga0070685_10002295 Ga0070685_100022956 297
172 3300005539 Ga0068853_100016383 Ga0068853_1000163832 297
173 3300005544 Ga0070686_100007986 Ga0070686_1000079862 297
174 3300005545 Ga0070695_100059717 Ga0070695_1000597172 297
175 3300005547 Ga0070693_100013222 Ga0070693_1000132222 297
176 3300005548 Ga0070665_100056629 Ga0070665_1000566292 297
177 3300005563 Ga0068855_100172990 Ga0068855_1001729902 297
178 3300005614 Ga0068856_100018086 Ga0068856_1000180864 297
179 3300005614 Ga0068856_100526963 Ga0068856_1005269632 297
180 3300005616 Ga0068852_100022800 Ga0068852_1000228003 297
181 3300005617 Ga0068859_100390286 Ga0068859_1003902862 297
182 3300005718 Ga0068866_10004905 Ga0068866_100049054 297
183 3300005844 Ga0068862_100269403 Ga0068862_1002694032 297
184 3300006038 Ga0075365_10003471 Ga0075365_100034716 297
185 3300006173 Ga0070716_100161667 Ga0070716_1001616671 297
186 3300006175 Ga0070712_100026093 Ga0070712_1000260934 297
187 3300006237 Ga0097621_100043050 Ga0097621_1000430502 297
188 3300006358 Ga0068871_100006274 Ga0068871_1000062746 297
189 3300006931 Ga0097620_100390287 Ga0097620_1003902871 297
190 3300009098 Ga0105245_10055591 Ga0105245_100555913 297
191 3300009101 Ga0105247_10006336 Ga0105247_100063364 297
192 3300009147 Ga0114129_10017782 Ga0114129_100177824 297
193 3300009147 Ga0114129_10113298 Ga0114129_101132981 297
194 3300009147 Ga0114129_10448662 Ga0114129_104486622 297
195 3300009148 Ga0105243_10022923 Ga0105243_100229231 297
196 3300009174 Ga0105241_10025745 Ga0105241_100257452 297
197 3300009176 Ga0105242_10023443 Ga0105242_100234434 297
198 3300009177 Ga0105248_10012282 Ga0105248_100122826 297
199 3300009551 Ga0105238_10285721 Ga0105238_102857212 297
200 3300009553 Ga0105249_10004170 Ga0105249_100041702 297
201 3300010375 Ga0105239_10007722 Ga0105239_100077224 297
202 3300011119 Ga0105246_10069964 Ga0105246_100699642 297
203 3300013100 Ga0157373_10247219 Ga0157373_102472192 297
204 3300013105 Ga0157369_10231679 Ga0157369_102316792 297
205 3300013296 Ga0157374_10016126 Ga0157374_100161262 297
206 3300013297 Ga0157378_10058948 Ga0157378_100589482 297
207 3300013306 Ga0163162_10010364 Ga0163162_100103647 297
208 3300013308 Ga0157375_10209618 Ga0157375_102096182 297
209 3300014326 Ga0157380_10003715 Ga0157380_100037157 297
210 3300014745 Ga0157377_10013947 Ga0157377_100139473 297
211 3300014969 Ga0157376_10092833 Ga0157376_100928333 297
212 3300025885 Ga0207653_10078130 Ga0207653_100781302 297
213 3300025898 Ga0207692_10093633 Ga0207692_100936332 297
214 3300025904 Ga0207647_10073433 Ga0207647_100734332 297
215 3300025905 Ga0207685_10156640 Ga0207685_101566401 297
216 3300025911 Ga0207654_10058560 Ga0207654_100585602 297
217 3300025915 Ga0207693_10003183 Ga0207693_100031833 297
218 3300025916 Ga0207663_10065347 Ga0207663_100653472 297
219 3300025917 Ga0207660_10127284 Ga0207660_101272842 297
220 3300025919 Ga0207657_10247518 Ga0207657_102475182 297
221 3300025921 Ga0207652_10208526 Ga0207652_102085262 297
222 3300025923 Ga0207681_10231638 Ga0207681_102316381 297
223 3300025928 Ga0207700_10128303 Ga0207700_101283032 297
224 3300025933 Ga0207706_10482323 Ga0207706_104823231 297
225 3300025934 Ga0207686_10011398 Ga0207686_100113982 297
226 3300025935 Ga0207709_10002506 Ga0207709_100025068 297
227 3300025936 Ga0207670_10253496 Ga0207670_102534961 297
228 3300025938 Ga0207704_10027703 Ga0207704_100277033 297
229 3300025939 Ga0207665_10013119 Ga0207665_100131192 297
230 3300025941 Ga0207711_10144692 Ga0207711_101446922 297
231 3300025960 Ga0207651_10161101 Ga0207651_101611012 297
232 3300025961 Ga0207712_10037692 Ga0207712_100376922 297
233 3300025972 Ga0207668_10385792 Ga0207668_103857921 297
234 3300026041 Ga0207639_10021710 Ga0207639_100217104 297
235 3300026067 Ga0207678_10021100 Ga0207678_100211004 297
236 3300026075 Ga0207708_10000316 Ga0207708_100003168 297
237 3300026118 Ga0207675_100023728 Ga0207675_1000237284 297
238 3300026121 Ga0207683_10005973 Ga0207683_100059739 297
239 3300026142 Ga0207698_10023509 Ga0207698_100235093 297
240 3300028379 Ga0268266_10034571 Ga0268266_100345711 297
241 3300028381 Ga0268264_10073742 Ga0268264_100737424 297
242 3300046501 Ga0495607_0186951 Ga0495607_0186951_71_964 297
243 3300046664 Ga0495659_0026055 Ga0495659_0026055_114_1046 297
244 3300048903 Ga0496100_0003070 Ga0496100_0003070_4073_4966 297
245 3300048904 Ga0496101_0086208 Ga0496101_0086208_1177_2070 297
246 3300048906 Ga0496103_0009926 Ga0496103_0009926_4278_5171 297
247 3300048907 Ga0496104_0013706 Ga0496104_0013706_1178_2071 297
248 3300048907 Ga0496104_0189752 Ga0496104_0189752_774_1670 297
249 3300048908 Ga0496105_0007298 Ga0496105_0007298_120_1013 297
250 3300048908 Ga0496105_0031002 Ga0496105_0031002_766_1662 297
251 3300048909 Ga0496106_0014978 Ga0496106_0014978_973_1866 297
252 3300048910 Ga0496107_0271353 Ga0496107_0271353_187_1080 297
253 3300048911 Ga0496108_0042850 Ga0496108_0042850_1633_2529 297
254 3300048912 Ga0496109_0002734 Ga0496109_0002734_2907_3803 297
255 3300048914 Ga0496111_0078767 Ga0496111_0078767_1023_1919 297
256 3300048915 Ga0496112_0047689 Ga0496112_0047689_981_1874 297
257 3300048916 Ga0496113_0081900 Ga0496113_0081900_50_943 297
258 3300048917 Ga0496114_0004393 Ga0496114_0004393_2171_3064 297
259 3300048918 Ga0496115_0002163 Ga0496115_0002163_11218_12111 297
260 3300050507 nmdc:mga05p37_45301_c1 nmdc:mga05p37_45301_c1_2643_3536 297
261 3300050507 nmdc:mga05p37_496094_c1 nmdc:mga05p37_496094_c1_267_1160 297

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

148

331

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4tqu-assembly1.cif.gz_N crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.8058 19 285
8hpn-assembly1.cif.gz_B lpqy-sugabc in state 3 0.7795 26 287
3fh6-assembly2.cif.gz_I crystal structure of the resting state maltose transporter from e. coli 0.7774 17 287
8hpn-assembly1.cif.gz_B lpqy-sugabc in state 3 0.7667 26 287
7cad-assembly1.cif.gz_B mycobacterium smegmatis sugabc complex 0.7666 20 293
ID Description Score Start End Superfamily
af_L7N652_1_266_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8867 24 287 1.10.3720.10
af_O53483_6_271_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8821 20 285 1.10.3720.10
af_P77716_1_267_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.879 20 282 1.10.3720.10
af_O53483_6_271_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8667 20 285 1.10.3720.10
af_L7N652_1_266_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.865 24 287 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A0K1JPY3-F1-model_v4 ABC transporter permease 0.9174 27 296 GO:0005886
GO:0055085
AF-X1TP36-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.9129 69 276 GO:0005886
GO:0055085
AF-A0A2R9UIB3-F1-model_v4 ABC transporter permease 0.9124 22 296 GO:0005886
GO:0055085
AF-A0A0Q8LWL8-F1-model_v4 ABC transporter permease 0.9118 28 296 GO:0005886
GO:0055085
AF-C5BZK1-F1-model_v4 Binding-protein-dependent transport systems inner membrane component 0.9095 15 296 GO:0005886
GO:0055085

Feature Viewer

pLDDT pTM Quality
79.18 0.71 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map