F370529

General Info

Members Datasets Scaffolds Average Seq Length
261 202 522 376

Family's Representative Sequence

Representative Sequence 3300044693|Ga0466961_0094758|Ga0466961_0094758_219_1511
Length 430
Sequence LVIVTHDRGTASAATSRPVLPRVAGARSATRRKSTVLLTGLLVAALALTACGTAGGNPVPSVGNQGFTPPSLPALGRLGQPEGRLSVLAWPGYAENGTDDPKVDWVTPFEQQSGCKVDVKAFGTSDDAISLMKTGQYDVVSASGDASLRLIAAGDVEPVNTSLVPNYADVFGFLKNQPWNSVNGVAYGIPHGWGANLLTWRTDKVDTAPTSWSVLFDPNSRYKGRITAYDSPIYIADAALYLRAHRPDLGIKNPYALDSTQFQAAVDLLKKQRPMVSDYWSDYLTESRSLATGVAVVGTAWQMTVNVTKDDGVPLESTVPSEGATGWSDTWMVASRSTHKTCAYLWLNYIVSPKVNAQVAEYFGEAPANAKACAQTVDPTHCVIYHAADAAYASKIAYWTTPISQCLDGRTDVKCEDYGAWTQAWAQIRG

Samples

Sample ID Description Type Environment
1 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
42 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
43 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
44 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
69 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
104 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
105 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
106 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
107 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
108 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
109 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
110 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
111 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
112 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
113 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
114 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
115 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
116 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
117 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
118 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
119 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
120 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
121 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
122 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
123 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
124 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
125 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
126 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
127 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
131 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
132 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
133 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
134 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
135 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
136 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
137 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
138 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
139 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
140 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
141 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
142 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
143 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
144 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
145 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
146 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
147 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
148 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
149 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
150 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
151 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
152 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
157 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
158 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
166 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
167 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
168 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
169 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
170 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
174 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
178 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
179 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
180 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
181 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
182 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
183 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
184 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
185 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
186 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
187 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
188 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
189 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
190 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
191 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
192 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
193 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
194 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
195 2558860280 Kutzneria sp. 744 Isolate Unclassified
196 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
197 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
198 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
199 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
200 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
201 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
202 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.55
Metatranscriptomes 0
Isolates 3.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.21
Nodule 0
Rhizoplane 3.07
Rhizosphere 83.14
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466961_0094758 3300044693 Bacteria 1883
2 Ga0070658_10078667 3300005327 Bacteria 2707
3 Ga0070658_10105911 3300005327 Bacteria 2326
4 Ga0070683_100028319 3300005329 Bacteria 5062
5 Ga0070683_100205751 3300005329 Bacteria 1869
6 Ga0070690_100089035 3300005330 Bacteria 2030
7 Ga0068869_100096236 3300005334 Bacteria 2234
8 Ga0070682_100012249 3300005337 Bacteria 4911
9 Ga0070682_100013426 3300005337 Bacteria 4712
10 Ga0068868_100041148 3300005338 Bacteria 3599
11 Ga0070689_100075313 3300005340 Bacteria 2642
12 Ga0070687_100006013 3300005343 Bacteria 4946
13 Ga0070692_10001297 3300005345 Bacteria 8976
14 Ga0070669_100048248 3300005353 Bacteria 3108
15 Ga0070675_100158437 3300005354 Bacteria 1945
16 Ga0070674_100011304 3300005356 Bacteria 5431
17 Ga0070673_100118794 3300005364 Bacteria 2202
18 Ga0070709_10000801 3300005434 Bacteria 17555
19 Ga0070714_100204630 3300005435 Bacteria 1807
20 Ga0070700_100007084 3300005441 Bacteria 6028
21 Ga0070700_100033579 3300005441 Bacteria 3091
22 Ga0070663_100002020 3300005455 Bacteria 11335
23 Ga0070663_100111821 3300005455 Bacteria 2053
24 Ga0070663_100177388 3300005455 Bacteria 1650
25 Ga0070662_100156812 3300005457 Bacteria 1778
26 Ga0068867_100029291 3300005459 Bacteria 3966
27 Ga0070685_10085470 3300005466 Bacteria 1900
28 Ga0070698_100004454 3300005471 Bacteria 15392
29 Ga0070684_100024247 3300005535 Bacteria 5087
30 Ga0068853_100034372 3300005539 Bacteria 4303
31 Ga0068853_100070828 3300005539 Bacteria 3035
32 Ga0070672_100022948 3300005543 Bacteria 4592
33 Ga0070686_100022330 3300005544 Bacteria 3767
34 Ga0070693_100039863 3300005547 Bacteria 2634
35 Ga0070665_100086076 3300005548 Bacteria 3149
36 Ga0070665_100261916 3300005548 Bacteria 1730
37 Ga0068855_100429790 3300005563 Bacteria 1444
38 Ga0068854_100018781 3300005578 Bacteria 4647
39 Ga0068856_100222607 3300005614 Bacteria 1902
40 Ga0070702_100004643 3300005615 Bacteria 6301
41 Ga0068852_100017683 3300005616 Bacteria 5599
42 Ga0068859_100241684 3300005617 Bacteria 1895
43 Ga0068861_100032584 3300005719 Bacteria 3837
44 Ga0068861_100043522 3300005719 Bacteria 3371
45 Ga0068861_100081027 3300005719 Bacteria 2540
46 Ga0068851_10038298 3300005834 Bacteria 2405
47 Ga0068870_10020445 3300005840 Bacteria 3225
48 Ga0068863_100009789 3300005841 Bacteria 9344
49 Ga0068863_100208830 3300005841 Bacteria 1880
50 Ga0068858_100203743 3300005842 Bacteria 1871
51 Ga0068860_100186072 3300005843 Bacteria 2008
52 Ga0081455_10051456 3300005937 Bacteria 3533
53 Ga0081539_10001405 3300005985 Bacteria 41451
54 Ga0075365_10003324 3300006038 Bacteria 8262
55 Ga0075432_10007422 3300006058 Bacteria 3733
56 Ga0097621_100168584 3300006237 Bacteria 1886
57 Ga0075428_100004316 3300006844 Bacteria 15670
58 Ga0075428_100044301 3300006844 Bacteria 4890
59 Ga0075431_100110077 3300006847 Bacteria 2843
60 Ga0075433_10000425 3300006852 Bacteria 27058
61 Ga0075434_100010487 3300006871 Bacteria 8688
62 Ga0075429_100034800 3300006880 Bacteria 4377
63 Ga0075429_100306290 3300006880 Bacteria 1391
64 Ga0068865_100041300 3300006881 Bacteria 3137
65 Ga0068865_100041906 3300006881 Bacteria 3118
66 Ga0075436_100015973 3300006914 Bacteria 5140
67 Ga0097620_100241665 3300006931 Bacteria 1895
68 Ga0111539_10017540 3300009094 Bacteria 8860
69 Ga0111539_10087950 3300009094 Bacteria 3650
70 Ga0105245_10018706 3300009098 Bacteria 6061
71 Ga0105245_10159817 3300009098 Bacteria 2137
72 Ga0114129_10050551 3300009147 Bacteria 5839
73 Ga0105243_10017900 3300009148 Bacteria 5361
74 Ga0105243_10058481 3300009148 Bacteria 3072
75 Ga0105243_10248162 3300009148 Bacteria 1588
76 Ga0105242_10110025 3300009176 Bacteria 2346
77 Ga0105238_10056206 3300009551 Bacteria 3949
78 Ga0105249_10118743 3300009553 Bacteria 2510
79 Ga0105239_10026661 3300010375 Bacteria 6360
80 Ga0105239_10081353 3300010375 Bacteria 3565
81 Ga0105239_10401681 3300010375 Bacteria 1551
82 Ga0157371_10084723 3300013102 Bacteria 2246
83 Ga0157371_10098996 3300013102 Bacteria 2068
84 Ga0157378_10207992 3300013297 Bacteria 1854
85 Ga0157372_10151927 3300013307 Bacteria 2673
86 Ga0157375_10273202 3300013308 Bacteria 1852
87 Ga0157375_10341576 3300013308 Bacteria 1663
88 Ga0163163_10060007 3300014325 Bacteria 3765
89 Ga0157380_10010224 3300014326 Bacteria 6743
90 Ga0157380_10152513 3300014326 Bacteria 1999
91 Ga0182008_10022249 3300014497 Bacteria 3247
92 Ga0157377_10004518 3300014745 Bacteria 6421
93 Ga0157376_10111051 3300014969 Bacteria 2413
94 Ga0163161_10101678 3300017792 Bacteria 2140
95 Ga0207688_10009408 3300025901 Bacteria 5321
96 Ga0207688_10020552 3300025901 Bacteria 3605
97 Ga0207647_10077258 3300025904 Bacteria 2001
98 Ga0207645_10004210 3300025907 Bacteria 10684
99 Ga0207643_10025675 3300025908 Bacteria 3258
100 Ga0207684_10095918 3300025910 Bacteria 2531
101 Ga0207662_10024634 3300025918 Bacteria 3463
102 Ga0207657_10111025 3300025919 Bacteria 2264
103 Ga0207694_10228735 3300025924 Bacteria 1518
104 Ga0207664_10171938 3300025929 Bacteria 1855
105 Ga0207690_10025649 3300025932 Bacteria 3704
106 Ga0207690_10151085 3300025932 Bacteria 1722
107 Ga0207706_10003126 3300025933 Bacteria 15895
108 Ga0207706_10008388 3300025933 Bacteria 9534
109 Ga0207709_10013037 3300025935 Bacteria 4583
110 Ga0207709_10021969 3300025935 Bacteria 3616
111 Ga0207691_10019358 3300025940 Bacteria 6441
112 Ga0207689_10067887 3300025942 Bacteria 2930
113 Ga0207661_10019106 3300025944 Bacteria 5102
114 Ga0207661_10088832 3300025944 Bacteria 2570
115 Ga0207651_10044021 3300025960 Bacteria 2984
116 Ga0207668_10025268 3300025972 Bacteria 3842
117 Ga0207703_10055882 3300026035 Bacteria 3213
118 Ga0207639_10231331 3300026041 Bacteria 1602
119 Ga0207678_10000391 3300026067 Bacteria 39957
120 Ga0207678_10151419 3300026067 Bacteria 1981
121 Ga0207678_10161156 3300026067 Bacteria 1916
122 Ga0207708_10013539 3300026075 Bacteria 6097
123 Ga0207641_10017730 3300026088 Bacteria 5832
124 Ga0207641_10175024 3300026088 Bacteria 1962
125 Ga0207648_10009301 3300026089 Bacteria 9422
126 Ga0207648_10064971 3300026089 Bacteria 3181
127 Ga0207648_10085755 3300026089 Bacteria 2747
128 Ga0207676_10072632 3300026095 Bacteria 2766
129 Ga0207674_10072063 3300026116 Bacteria 3471
130 Ga0207675_100000686 3300026118 Bacteria 33362
131 Ga0207675_100020154 3300026118 Bacteria 6217
132 Ga0207675_100101792 3300026118 Bacteria 2706
133 Ga0207698_10030677 3300026142 Bacteria 3870
134 Ga0207698_10085671 3300026142 Bacteria 2559
135 Ga0207428_10023337 3300027907 Bacteria 5204
136 Ga0207428_10031888 3300027907 Bacteria 4340
137 Ga0268266_10151045 3300028379 Bacteria 2093
138 Ga0268265_10013018 3300028380 Bacteria 5649
139 Ga0268264_10187790 3300028381 Bacteria 1881
140 Ga0307517_10006154 3300028786 Bacteria 17876
141 Ga0307515_10000027 3300028794 Bacteria 371624
142 Ga0307515_10006363 3300028794 Bacteria 23641
143 Ga0307515_10126220 3300028794 Bacteria 2856
144 Ga0307511_10001274 3300030521 Bacteria 26705
145 Ga0307512_10008917 3300030522 Bacteria 9729
146 Ga0307513_10025522 3300031456 Bacteria 6842
147 Ga0307513_10077294 3300031456 Bacteria 3448
148 Ga0307509_10051129 3300031507 Bacteria 4422
149 Ga0307509_10129277 3300031507 Bacteria 2485
150 Ga0307508_10130181 3300031616 Bacteria 2119
151 Ga0316578_10049931 3300031728 Bacteria 2446
152 Ga0307516_10077158 3300031730 Bacteria 3181
153 Ga0307405_10008377 3300031731 Bacteria 5236
154 Ga0307413_10106070 3300031824 Bacteria 1869
155 Ga0307518_10000241 3300031838 Bacteria 41161
156 Ga0307410_10001770 3300031852 Bacteria 10000
157 Ga0307410_10071471 3300031852 Bacteria 2407
158 Ga0307406_10045287 3300031901 Bacteria 2761
159 Ga0307409_100020631 3300031995 Bacteria 4496
160 Ga0307409_100092116 3300031995 Bacteria 2486
161 Ga0307409_100137804 3300031995 Bacteria 2097
162 Ga0307416_100038145 3300032002 Bacteria 3704
163 Ga0307415_100137127 3300032126 Bacteria 1863
164 Ga0307507_10037607 3300033179 Bacteria 4923
165 Ga0307507_10068637 3300033179 Bacteria 3233
166 Ga0307507_10133528 3300033179 Bacteria 1931
167 Ga0373936_0000009 3300035113 Bacteria 263478
168 Ga0373941_0017367 3300035115 Bacteria 1971
169 Ga0373937_0063213 3300036401 Bacteria 3404
170 Ga0316582_0112679 3300036647 Bacteria 1812
171 Ga0373925_0295827 3300037068 Bacteria 1306
172 Ga0439448_0006285 3300042005 Bacteria 3412
173 Ga0466969_0003513 3300044656 Bacteria 8322
174 Ga0466969_0032243 3300044656 Bacteria 2663
175 Ga0466966_0009999 3300044684 Bacteria 6287
176 Ga0466961_0054032 3300044693 Bacteria 2562
177 Ga0466957_0098397 3300044842 Bacteria 1841
178 Ga0466967_0076296 3300045976 Bacteria 3015
179 Ga0495629_0119819 3300046459 Bacteria 1834
180 Ga0495629_0214638 3300046459 Bacteria 1328
181 Ga0495638_0046243 3300046460 Bacteria 2735
182 Ga0495651_0003424 3300046462 Bacteria 12173
183 Ga0495651_0088372 3300046462 Bacteria 2329
184 Ga0495584_0047683 3300046491 Bacteria 2161
185 Ga0495608_0028355 3300046511 Bacteria 3805
186 Ga0495620_0058399 3300046515 Bacteria 1615
187 Ga0495643_0003620 3300046522 Bacteria 11229
188 Ga0495652_0048281 3300046529 Bacteria 3648
189 Ga0495633_0058961 3300046558 Bacteria 1801
190 Ga0495667_0010188 3300046559 Bacteria 6363
191 Ga0495657_0015555 3300046675 Bacteria 5564
192 Ga0495623_0037144 3300046679 Bacteria 3119
193 Ga0495658_0099486 3300046683 Bacteria 1734
194 Ga0495670_0076614 3300046691 Bacteria 1699
195 Ga0495589_0070701 3300046794 Bacteria 1706
196 Ga0495660_0029441 3300046810 Bacteria 3098
197 Ga0495680_0034035 3300047322 Bacteria 4121
198 Ga0495680_0192932 3300047322 Bacteria 1465
199 Ga0495677_0018623 3300047445 Bacteria 2517
200 Ga0495685_006199 3300047447 Bacteria 3909
201 Ga0495681_0082032 3300047470 Bacteria 1437
202 Ga0495602_0168078 3300048088 Bacteria 1705
203 Ga0496102_0200430 3300048905 Bacteria 1881
204 Ga0496102_0319908 3300048905 Bacteria 1462
205 Ga0496108_0047945 3300048911 Bacteria 3572
206 Ga0496108_0195524 3300048911 Bacteria 1754
207 Ga0496109_0044753 3300048912 Bacteria 4016
208 Ga0496110_0107333 3300048913 Bacteria 2506
209 Ga0496110_0113996 3300048913 Bacteria 2432
210 Ga0496112_0006198 3300048915 Bacteria 10467
211 Ga0496121_0087652 3300048924 Bacteria 2443
212 Ga0501031_0089660 3300049568 Bacteria 2005
213 Ga0501034_0025638 3300049571 Bacteria 6004
214 Ga0501034_0179974 3300049571 Bacteria 2079
215 Ga0501039_0076436 3300049575 Bacteria 2603
216 Ga0501041_0136194 3300049577 Bacteria 1530
217 Ga0501042_0026679 3300049578 Bacteria 4058
218 Ga0501047_0154792 3300049581 Bacteria 2166
219 Ga0501048_0007742 3300049582 Bacteria 8143
220 Ga0501075_0017442 3300049591 Bacteria 5187
221 Ga0501076_0014733 3300049592 Bacteria 5894
222 Ga0501077_0009472 3300049593 Bacteria 6053
223 Ga0501079_0103890 3300049741 Bacteria 2204
224 Ga0501083_0106288 3300049744 Bacteria 1848
225 Ga0501035_0030660 3300049822 Bacteria 4902
226 Ga0501045_0077013 3300049824 Bacteria 2457
227 nmdc:mga05p37_38540_c1 3300050507 Bacteria 5863
228 nmdc:mga09592_28909_c1 3300050508 Bacteria 4609
229 nmdc:mga0qj67_95706_c1 3300050509 Bacteria 2390
230 nmdc:mga08y16_29357_c1 3300050511 Bacteria 5795
231 nmdc:mga08y16_388945_c1 3300050511 Bacteria 1429
232 nmdc:mga08y16_47055_c1 3300050511 Bacteria 4516
233 nmdc:mga0n895_48439_c1 3300050512 Bacteria 4160
234 nmdc:mga0a205_24249_c1 3300050515 Bacteria 5765
235 nmdc:mga0a205_6751_c1 3300050515 Bacteria 10378
236 Ga0495595_0006952 3300053084 Bacteria 4621
237 Ga0500578_0138817 3300053086 Bacteria 1520
238 Ga0500654_085145 3300053099 Bacteria 1445
239 Ga0500569_009705 3300053109 Bacteria 2244
240 Ga0500628_017381 3300053129 Bacteria 1404
241 Ga0500658_0007952 3300053134 Bacteria 3918
242 Ga0500600_0054593 3300053149 Bacteria 2251
243 Ga0500616_0018069 3300053153 Bacteria 3990
244 Ga0500616_0025314 3300053153 Bacteria 3292
245 Ga0500633_0031542 3300053160 Bacteria 1713
246 Ga0500634_0016742 3300053161 Bacteria 3915
247 Ga0501084_0026872 3300054114 Bacteria 4808
248 Ga0590071_000465 3300059421 Bacteria 11842
249 Ga0590074_000390 3300059423 Bacteria 6252
250 Ga0590075_002471 3300059424 Bacteria 4420
251 Ga0501082_0025248 3300060353 Bacteria 5120
252 Ga0530510_0045957 3300061734 Bacteria 3155
253 2558909597 2558860112 Bacteria 9931328
254 2559425955 2558860280 Bacteria 11429938
255 2586064006 2585427649 Bacteria 9053857
256 2809586744 2808606522 Bacteria 9488490
257 2870783773 2870782633 Bacteria 9624083
258 2915776092 2915768154 Bacteria 8424322
259 2917740516 2917736166 Bacteria 9690793
260 2997600720 2997600082 Bacteria 9896405
261 8053947184 8053945823 Bacteria 8962862
262 Ga0466961_0094758
263 Ga0070658_10078667
264 Ga0070658_10105911
265 Ga0070683_100028319
266 Ga0070683_100205751
267 Ga0070690_100089035
268 Ga0068869_100096236
269 Ga0070682_100012249
270 Ga0070682_100013426
271 Ga0068868_100041148
272 Ga0070689_100075313
273 Ga0070687_100006013
274 Ga0070692_10001297
275 Ga0070669_100048248
276 Ga0070675_100158437
277 Ga0070674_100011304
278 Ga0070673_100118794
279 Ga0070709_10000801
280 Ga0070714_100204630
281 Ga0070700_100007084
282 Ga0070700_100033579
283 Ga0070663_100002020
284 Ga0070663_100111821
285 Ga0070663_100177388
286 Ga0070662_100156812
287 Ga0068867_100029291
288 Ga0070685_10085470
289 Ga0070698_100004454
290 Ga0070684_100024247
291 Ga0068853_100034372
292 Ga0068853_100070828
293 Ga0070672_100022948
294 Ga0070686_100022330
295 Ga0070693_100039863
296 Ga0070665_100086076
297 Ga0070665_100261916
298 Ga0068855_100429790
299 Ga0068854_100018781
300 Ga0068856_100222607
301 Ga0070702_100004643
302 Ga0068852_100017683
303 Ga0068859_100241684
304 Ga0068861_100032584
305 Ga0068861_100043522
306 Ga0068861_100081027
307 Ga0068851_10038298
308 Ga0068870_10020445
309 Ga0068863_100009789
310 Ga0068863_100208830
311 Ga0068858_100203743
312 Ga0068860_100186072
313 Ga0081455_10051456
314 Ga0081539_10001405
315 Ga0075365_10003324
316 Ga0075432_10007422
317 Ga0097621_100168584
318 Ga0075428_100004316
319 Ga0075428_100044301
320 Ga0075431_100110077
321 Ga0075433_10000425
322 Ga0075434_100010487
323 Ga0075429_100034800
324 Ga0075429_100306290
325 Ga0068865_100041300
326 Ga0068865_100041906
327 Ga0075436_100015973
328 Ga0097620_100241665
329 Ga0111539_10017540
330 Ga0111539_10087950
331 Ga0105245_10018706
332 Ga0105245_10159817
333 Ga0114129_10050551
334 Ga0105243_10017900
335 Ga0105243_10058481
336 Ga0105243_10248162
337 Ga0105242_10110025
338 Ga0105238_10056206
339 Ga0105249_10118743
340 Ga0105239_10026661
341 Ga0105239_10081353
342 Ga0105239_10401681
343 Ga0157371_10084723
344 Ga0157371_10098996
345 Ga0157378_10207992
346 Ga0157372_10151927
347 Ga0157375_10273202
348 Ga0157375_10341576
349 Ga0163163_10060007
350 Ga0157380_10010224
351 Ga0157380_10152513
352 Ga0182008_10022249
353 Ga0157377_10004518
354 Ga0157376_10111051
355 Ga0163161_10101678
356 Ga0207688_10009408
357 Ga0207688_10020552
358 Ga0207647_10077258
359 Ga0207645_10004210
360 Ga0207643_10025675
361 Ga0207684_10095918
362 Ga0207662_10024634
363 Ga0207657_10111025
364 Ga0207694_10228735
365 Ga0207664_10171938
366 Ga0207690_10025649
367 Ga0207690_10151085
368 Ga0207706_10003126
369 Ga0207706_10008388
370 Ga0207709_10013037
371 Ga0207709_10021969
372 Ga0207691_10019358
373 Ga0207689_10067887
374 Ga0207661_10019106
375 Ga0207661_10088832
376 Ga0207651_10044021
377 Ga0207668_10025268
378 Ga0207703_10055882
379 Ga0207639_10231331
380 Ga0207678_10000391
381 Ga0207678_10151419
382 Ga0207678_10161156
383 Ga0207708_10013539
384 Ga0207641_10017730
385 Ga0207641_10175024
386 Ga0207648_10009301
387 Ga0207648_10064971
388 Ga0207648_10085755
389 Ga0207676_10072632
390 Ga0207674_10072063
391 Ga0207675_100000686
392 Ga0207675_100020154
393 Ga0207675_100101792
394 Ga0207698_10030677
395 Ga0207698_10085671
396 Ga0207428_10023337
397 Ga0207428_10031888
398 Ga0268266_10151045
399 Ga0268265_10013018
400 Ga0268264_10187790
401 Ga0307517_10006154
402 Ga0307515_10000027
403 Ga0307515_10006363
404 Ga0307515_10126220
405 Ga0307511_10001274
406 Ga0307512_10008917
407 Ga0307513_10025522
408 Ga0307513_10077294
409 Ga0307509_10051129
410 Ga0307509_10129277
411 Ga0307508_10130181
412 Ga0316578_10049931
413 Ga0307516_10077158
414 Ga0307405_10008377
415 Ga0307413_10106070
416 Ga0307518_10000241
417 Ga0307410_10001770
418 Ga0307410_10071471
419 Ga0307406_10045287
420 Ga0307409_100020631
421 Ga0307409_100092116
422 Ga0307409_100137804
423 Ga0307416_100038145
424 Ga0307415_100137127
425 Ga0307507_10037607
426 Ga0307507_10068637
427 Ga0307507_10133528
428 Ga0373936_0000009
429 Ga0373941_0017367
430 Ga0373937_0063213
431 Ga0316582_0112679
432 Ga0373925_0295827
433 Ga0439448_0006285
434 Ga0466969_0003513
435 Ga0466969_0032243
436 Ga0466966_0009999
437 Ga0466961_0054032
438 Ga0466957_0098397
439 Ga0466967_0076296
440 Ga0495629_0119819
441 Ga0495629_0214638
442 Ga0495638_0046243
443 Ga0495651_0003424
444 Ga0495651_0088372
445 Ga0495584_0047683
446 Ga0495608_0028355
447 Ga0495620_0058399
448 Ga0495643_0003620
449 Ga0495652_0048281
450 Ga0495633_0058961
451 Ga0495667_0010188
452 Ga0495657_0015555
453 Ga0495623_0037144
454 Ga0495658_0099486
455 Ga0495670_0076614
456 Ga0495589_0070701
457 Ga0495660_0029441
458 Ga0495680_0034035
459 Ga0495680_0192932
460 Ga0495677_0018623
461 Ga0495685_006199
462 Ga0495681_0082032
463 Ga0495602_0168078
464 Ga0496102_0200430
465 Ga0496102_0319908
466 Ga0496108_0047945
467 Ga0496108_0195524
468 Ga0496109_0044753
469 Ga0496110_0107333
470 Ga0496110_0113996
471 Ga0496112_0006198
472 Ga0496121_0087652
473 Ga0501031_0089660
474 Ga0501034_0025638
475 Ga0501034_0179974
476 Ga0501039_0076436
477 Ga0501041_0136194
478 Ga0501042_0026679
479 Ga0501047_0154792
480 Ga0501048_0007742
481 Ga0501075_0017442
482 Ga0501076_0014733
483 Ga0501077_0009472
484 Ga0501079_0103890
485 Ga0501083_0106288
486 Ga0501035_0030660
487 Ga0501045_0077013
488 nmdc:mga05p37_38540_c1
489 nmdc:mga09592_28909_c1
490 nmdc:mga0qj67_95706_c1
491 nmdc:mga08y16_29357_c1
492 nmdc:mga08y16_388945_c1
493 nmdc:mga08y16_47055_c1
494 nmdc:mga0n895_48439_c1
495 nmdc:mga0a205_24249_c1
496 nmdc:mga0a205_6751_c1
497 Ga0495595_0006952
498 Ga0500578_0138817
499 Ga0500654_085145
500 Ga0500569_009705
501 Ga0500628_017381
502 Ga0500658_0007952
503 Ga0500600_0054593
504 Ga0500616_0018069
505 Ga0500616_0025314
506 Ga0500633_0031542
507 Ga0500634_0016742
508 Ga0501084_0026872
509 Ga0590071_000465
510 Ga0590074_000390
511 Ga0590075_002471
512 Ga0501082_0025248
513 Ga0530510_0045957
514 2558909597
515 2559425955
516 2586064006
517 2809586744
518 2870783773
519 2915776092
520 2917740516
521 2997600720
522 8053947184

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13343

SBP_bac_6

Bacterial extracellular solute-binding protein

136

390

0.86

PF13416

SBP_bac_8

Bacterial extracellular solute-binding protein

104

381

0.86

PF01547

SBP_bac_1

Bacterial extracellular solute-binding protein

90

357

0.61

Structural Annotation

Top 5 Hits

ID Description Score Start End
6nlp-assembly2.cif.gz_B the crystal structure of an abc transporter periplasmic binding protein ydcs from escherichia coli bw25113 0.9412 33 386
6nlp-assembly2.cif.gz_B the crystal structure of an abc transporter periplasmic binding protein ydcs from escherichia coli bw25113 0.9335 33 386
2v84-assembly1.cif.gz_A crystal structure of the tp0655 (tppotd) lipoprotein of treponema pallidum 0.8804 36 382
2v84-assembly1.cif.gz_A crystal structure of the tp0655 (tppotd) lipoprotein of treponema pallidum 0.8674 36 382
1poy-assembly1.cif.gz_2 spermidine/putrescine-binding protein complexed with spermidine (dimer form) 0.8414 36 386
ID Description Score Start End Superfamily
af_P76108_147_279_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9937 148 280 3.40.190.10
af_P76108_147_279_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9863 148 280 3.40.190.10
af_P76108_33_144_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9806 34 145 3.40.190.10
af_P76108_33_144_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.972 34 145 3.40.190.10
af_Q2G2A8_37_140_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8712 37 138 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A530M4X2-F1-model_v4 Spermidine/putrescine ABC transporter substrate-binding protein 0.9958 153 268
AF-A0A377W0F7-F1-model_v4 ABC transporter, periplasmic spermidine putrescine-binding protein PotD 0.9886 152 251
AF-A0A530M4X2-F1-model_v4 Spermidine/putrescine ABC transporter substrate-binding protein 0.979 153 268
AF-A0A2G4E428-F1-model_v4 Spermidine/putrescine ABC transporter substrate-binding protein 0.971 89 357 GO:0015846
GO:0019808
GO:0042597
AF-A0A377W0F7-F1-model_v4 ABC transporter, periplasmic spermidine putrescine-binding protein PotD 0.9694 152 251

Map