F370324

General Info

Members Datasets Scaffolds Average Seq Length
261 193 247 185

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10509599|Ga0105239_105095992
Length 211
Sequence MPPEAHQESRFRGSFEVPKGANLMSTTSSSTPEATTTIWNLDPVHSIAEFKVKHMMISNVKGQFTGISGVLHLDESDVANSRVEVAVDARSINTRDPQRDAHLKSADFFDVEQYPALSFRSTRIDRMGDGELTVTGDLTIRGVTGEVVFQVEGFTPPARDPWGGTRIGLSATTKINRKDYGLVWNAALETGGILVGDEVTITLDVQFVKAT

Samples

Sample ID Description Type Environment
1 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
2 2857479173 Micrococcus sp. R-74225 Isolate Unclassified
3 2857632687 Micrococcus sp. R-73081 Isolate Unclassified
4 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
5 2870804320 Micrococcus yunnanensis DSM 21948 Isolate Unclassified
6 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
7 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
8 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
9 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
10 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
11 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
12 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
13 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
14 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
15 3300003162 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
16 3300003163 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
17 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
18 3300003574 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
19 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
20 3300003577 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
21 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
22 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
23 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
24 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
25 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
26 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
27 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
28 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
29 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
30 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
31 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
32 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
33 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
34 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
35 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
36 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
37 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
38 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
39 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
40 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
41 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
42 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
45 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
46 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
47 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
48 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
49 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
50 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
51 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
52 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
53 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
54 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
55 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
56 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
57 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
58 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
59 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
60 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
75 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
78 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
79 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
80 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
81 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
82 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
83 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
84 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
85 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
86 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
120 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
121 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
122 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
123 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
124 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
125 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
126 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
127 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
128 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
129 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
130 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
131 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
132 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
133 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
134 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
135 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
136 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
137 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
138 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
139 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
140 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
141 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
142 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
143 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
144 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
145 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
146 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
147 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
148 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
149 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
150 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
151 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
152 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
153 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
154 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
155 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
156 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
157 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
158 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
159 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
160 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
161 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
162 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
163 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
164 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
165 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
166 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
167 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
168 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
169 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
170 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
171 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
172 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
173 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
174 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
175 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
176 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
177 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
178 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
179 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
180 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
181 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
182 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
183 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
184 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
185 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
186 3300049540 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
187 3300049541 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_A_4_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
188 3300049546 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_B_4_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
189 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
190 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
191 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
192 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
193 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.84
Metatranscriptomes 13.79
Isolates 5.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.38
Nodule 0
Rhizoplane 4.21
Rhizosphere 91.95
Stem 0
Stem Tuber 0
Unclassified 3.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006778J45830_1020188 3300003162 Bacteria 595
2 Ga0006759J45824_1023275 3300003163 Bacteria 591
3 rootH1_10013370 3300003323 Bacteria 5929
4 Ga0007410J51695_1023519 3300003574 Bacteria 604
5 Ga0007409J51694_1021995 3300003575 Bacteria 607
6 Ga0007416J51690_1023669 3300003577 Bacteria 604
7 Ga0032354_1008865 3300003693 Bacteria 625
8 Ga0058863_10089917 3300004799 Bacteria 653
9 Ga0070658_10308722 3300005327 Bacteria 1349
10 Ga0070676_10430405 3300005328 Unclassified 924
11 Ga0070683_100717503 3300005329 Bacteria 958
12 Ga0068869_100416294 3300005334 Bacteria 1108
13 Ga0070680_100118119 3300005336 Bacteria 2212
14 Ga0070680_100221002 3300005336 Bacteria 1599
15 Ga0070680_100237400 3300005336 Bacteria 1540
16 Ga0068868_100594829 3300005338 Bacteria 979
17 Ga0068868_101131655 3300005338 Unclassified 721
18 Ga0070660_100150326 3300005339 Bacteria 1872
19 Ga0070674_100107807 3300005356 Bacteria 2040
20 Ga0070674_100828937 3300005356 Bacteria 801
21 Ga0070674_100830633 3300005356 Unclassified 800
22 Ga0070673_100590684 3300005364 Bacteria 1012
23 Ga0070659_100060616 3300005366 Bacteria 2988
24 Ga0070659_100189291 3300005366 Bacteria 1691
25 Ga0070709_10142600 3300005434 Bacteria 1647
26 Ga0070714_100051232 3300005435 Bacteria 3519
27 Ga0070714_100565530 3300005435 Bacteria 1090
28 Ga0070713_100007418 3300005436 Bacteria 7696
29 Ga0070713_100081747 3300005436 Bacteria 2757
30 Ga0070678_100760499 3300005456 Bacteria 877
31 Ga0070681_10037688 3300005458 Bacteria 4850
32 Ga0070681_10175815 3300005458 Unclassified 2063
33 Ga0070681_10267321 3300005458 Bacteria 1621
34 Ga0070681_10882186 3300005458 Bacteria 813
35 Ga0070698_100285185 3300005471 Bacteria 1583
36 Ga0070699_100081592 3300005518 Bacteria 2819
37 Ga0070699_100706827 3300005518 Unclassified 921
38 Ga0070679_100060511 3300005530 Bacteria 3774
39 Ga0070679_100286706 3300005530 Bacteria 1598
40 Ga0070679_100316081 3300005530 Bacteria 1511
41 Ga0070679_100435225 3300005530 Bacteria 1256
42 Ga0070679_100732041 3300005530 Bacteria 932
43 Ga0070684_100256694 3300005535 Bacteria 1598
44 Ga0070697_100091576 3300005536 Bacteria 2514
45 Ga0068853_100027292 3300005539 Bacteria 4796
46 Ga0068853_100125665 3300005539 Bacteria 2291
47 Ga0070693_100839000 3300005547 Bacteria 684
48 Ga0070665_100145553 3300005548 Bacteria 2373
49 Ga0070704_100774078 3300005549 Bacteria 856
50 Ga0068855_100027993 3300005563 Bacteria 6742
51 Ga0068855_100268250 3300005563 Bacteria 1899
52 Ga0068855_100437266 3300005563 Bacteria 1429
53 Ga0070664_100001062 3300005564 Bacteria 21613
54 Ga0068857_100014889 3300005577 Bacteria 6783
55 Ga0068856_101230190 3300005614 Bacteria 765
56 Ga0068852_100056213 3300005616 Bacteria 3400
57 Ga0068852_100208133 3300005616 Unclassified 1854
58 Ga0068859_102030282 3300005617 Bacteria 635
59 Ga0068864_100112521 3300005618 Bacteria 2426
60 Ga0068864_100671677 3300005618 Bacteria 1010
61 Ga0068863_100052129 3300005841 Bacteria 3878
62 Ga0068860_100004312 3300005843 Bacteria 14546
63 Ga0070717_10012396 3300006028 Bacteria 6500
64 Ga0070716_100081728 3300006173 Unclassified 1930
65 Ga0070716_100179161 3300006173 Bacteria 1390
66 Ga0070716_101054389 3300006173 Unclassified 646
67 Ga0068871_100577067 3300006358 Unclassified 1021
68 Ga0075433_10066259 3300006852 Bacteria 3168
69 Ga0075434_100811637 3300006871 Bacteria 951
70 Ga0097620_102029223 3300006931 Bacteria 635
71 Ga0105240_10000837 3300009093 Bacteria 55378
72 Ga0105240_10036181 3300009093 Bacteria 6352
73 Ga0114129_10019187 3300009147 Bacteria 9741
74 Ga0114129_10709118 3300009147 Bacteria 1292
75 Ga0105242_10393645 3300009176 Bacteria 1291
76 Ga0105248_10124877 3300009177 Bacteria 2903
77 Ga0105248_10762050 3300009177 Unclassified 1092
78 Ga0105237_10014085 3300009545 Bacteria 8366
79 Ga0105237_11050549 3300009545 Bacteria 821
80 Ga0105249_10220211 3300009553 Bacteria 1867
81 Ga0105239_10509599 3300010375 Unclassified 1368
82 Ga0105246_10028658 3300011119 Bacteria 3660
83 Ga0157373_10054570 3300013100 Bacteria 2839
84 Ga0157371_10348074 3300013102 Bacteria 1078
85 Ga0157370_10079267 3300013104 Bacteria 3093
86 Ga0157370_10180595 3300013104 Bacteria 1961
87 Ga0157369_10026476 3300013105 Bacteria 6432
88 Ga0157369_10069606 3300013105 Bacteria 3780
89 Ga0157369_10127333 3300013105 Bacteria 2699
90 Ga0157374_11151317 3300013296 Bacteria 797
91 Ga0157378_10462491 3300013297 Bacteria 1261
92 Ga0163162_10576211 3300013306 Bacteria 1253
93 Ga0157372_10473955 3300013307 Bacteria 1459
94 Ga0157372_10874867 3300013307 Bacteria 1043
95 Ga0157375_10104499 3300013308 Bacteria 2921
96 Ga0157380_10943977 3300014326 Bacteria 892
97 Ga0157376_10000681 3300014969 Bacteria 21993
98 Ga0197907_10641315 3300020069 Unclassified 952
99 Ga0206350_10367507 3300020080 Unclassified 995
100 Ga0154015_1472862 3300020610 Bacteria 1818
101 Ga0154015_1622564 3300020610 Unclassified 849
102 Ga0224712_10351454 3300022467 Bacteria 697
103 Ga0224572_1020377 3300024225 Bacteria 1274
104 Ga0207685_10084314 3300025905 Unclassified 1323
105 Ga0207643_10281316 3300025908 Bacteria 1032
106 Ga0207684_10153709 3300025910 Bacteria 1980
107 Ga0207707_10263471 3300025912 Bacteria 1495
108 Ga0207707_10881115 3300025912 Bacteria 741
109 Ga0207695_10003257 3300025913 Bacteria 23077
110 Ga0207671_10076966 3300025914 Bacteria 2497
111 Ga0207693_10255884 3300025915 Bacteria 1373
112 Ga0207660_10050125 3300025917 Bacteria 2964
113 Ga0207660_10421786 3300025917 Bacteria 1076
114 Ga0207657_10112426 3300025919 Bacteria 2248
115 Ga0207649_10109969 3300025920 Bacteria 1839
116 Ga0207649_10266983 3300025920 Bacteria 1239
117 Ga0207652_10147695 3300025921 Bacteria 2104
118 Ga0207652_10294981 3300025921 Bacteria 1463
119 Ga0207652_10519564 3300025921 Bacteria 1071
120 Ga0207659_10256429 3300025926 Bacteria 1421
121 Ga0207700_10017482 3300025928 Bacteria 4791
122 Ga0207700_10359435 3300025928 Unclassified 1269
123 Ga0207664_10043738 3300025929 Bacteria 3505
124 Ga0207664_10281244 3300025929 Bacteria 1460
125 Ga0207664_10932247 3300025929 Bacteria 779
126 Ga0207690_10111127 3300025932 Bacteria 1974
127 Ga0207669_10191230 3300025937 Bacteria 1477
128 Ga0207665_10030728 3300025939 Bacteria 3551
129 Ga0207665_10146090 3300025939 Bacteria 1690
130 Ga0207665_10175164 3300025939 Unclassified 1551
131 Ga0207711_10349394 3300025941 Bacteria 1369
132 Ga0207711_10711559 3300025941 Unclassified 937
133 Ga0207689_10318850 3300025942 Bacteria 1290
134 Ga0207661_10489945 3300025944 Bacteria 1123
135 Ga0207679_10262648 3300025945 Bacteria 1473
136 Ga0207667_10123098 3300025949 Bacteria 2672
137 Ga0207667_10264345 3300025949 Bacteria 1759
138 Ga0207667_10400383 3300025949 Bacteria 1398
139 Ga0207651_10665476 3300025960 Bacteria 915
140 Ga0207677_10727081 3300026023 Bacteria 883
141 Ga0207639_10165610 3300026041 Bacteria 1867
142 Ga0207702_10704193 3300026078 Bacteria 995
143 Ga0207641_10325631 3300026088 Bacteria 1458
144 Ga0207676_10965215 3300026095 Bacteria 838
145 Ga0207674_10002271 3300026116 Bacteria 24359
146 Ga0207683_10392573 3300026121 Bacteria 1276
147 Ga0207698_10017152 3300026142 Bacteria 4906
148 Ga0207698_10472521 3300026142 Bacteria 1215
149 Ga0268266_10896006 3300028379 Unclassified 858
150 Ga0268264_10190440 3300028381 Bacteria 1869
151 Ga0265338_10106620 3300028800 Unclassified 2268
152 Ga0265762_1018631 3300030760 Bacteria 1268
153 Ga0265331_10100330 3300031250 Unclassified 1333
154 Ga0265327_10041635 3300031251 Bacteria 2474
155 Ga0265316_10124158 3300031344 Bacteria 1948
156 Ga0265313_10079549 3300031595 Bacteria 1492
157 Ga0316575_10177279 3300031665 Bacteria 884
158 Ga0316579_10019407 3300031691 Bacteria 3004
159 Ga0265342_10040545 3300031712 Bacteria 2824
160 Ga0316578_10096189 3300031728 Bacteria 1772
161 Ga0316585_10137347 3300032137 Bacteria 806
162 Ga0316580_10070729 3300032139 Bacteria 1068
163 Ga0307507_10030321 3300033179 Bacteria 5707
164 Ga0373945_0032434 3300035116 Bacteria 1851
165 Ga0316574_0051190 3300035398 Bacteria 2573
166 Ga0373924_0075994 3300035410 Bacteria 1423
167 Ga0373935_0009252 3300035692 Bacteria 5898
168 Ga0373935_0157665 3300035692 Bacteria 1545
169 Ga0373947_0027680 3300035725 Unclassified 3319
170 Ga0316582_0012809 3300036647 Bacteria 4696
171 Ga0316584_0303472 3300036712 Bacteria 1155
172 Ga0373925_0201498 3300037068 Bacteria 1583
173 Ga0395899_0380148 3300037312 Bacteria 939
174 Ga0395900_0677165 3300037418 Bacteria 966
175 Ga0395900_0802602 3300037418 Bacteria 869
176 Ga0395898_0538028 3300037466 Unclassified 1110
177 Ga0395905_0000282 3300037471 Bacteria 74379
178 Ga0395901_0342600 3300038443 Bacteria 1544
179 Ga0439436_0004568 3300041404 Bacteria 4245
180 Ga0451797_1524575 3300041453 Bacteria 598
181 Ga0451802_0952860 3300041460 Bacteria 727
182 Ga0451835_0941007 3300041492 Bacteria 761
183 Ga0451853_3106819 3300041512 Bacteria 1113
184 Ga0439433_0002013 3300041999 Unclassified 4267
185 Ga0439457_001577 3300042014 Bacteria 6816
186 Ga0450898_047898 3300042134 Unclassified 821
187 Ga0466969_0224976 3300044656 Bacteria 853
188 Ga0466957_0620777 3300044842 Bacteria 758
189 Ga0466960_0001177 3300044901 Bacteria 9419
190 Ga0466958_0186945 3300045836 Bacteria 1316
191 Ga0466967_0204996 3300045976 Bacteria 1869
192 Ga0466967_0333526 3300045976 Bacteria 1465
193 Ga0495617_010906 3300046452 Bacteria 3109
194 Ga0495603_0055404 3300046455 Bacteria 2349
195 Ga0495653_0344344 3300046463 Bacteria 960
196 Ga0495580_0000335 3300046472 Bacteria 38575
197 Ga0495628_0198100 3300046516 Bacteria 1514
198 Ga0495630_0086728 3300046517 Unclassified 2364
199 Ga0495665_0084170 3300046531 Bacteria 1672
200 Ga0495635_0146422 3300046663 Bacteria 1608
201 Ga0495623_0212515 3300046679 Bacteria 1107
202 Ga0495604_0062438 3300047317 Bacteria 2846
203 Ga0495674_0051033 3300047319 Unclassified 3647
204 Ga0495674_0772041 3300047319 Bacteria 749
205 Ga0495675_0060048 3300047444 Bacteria 2410
206 Ga0495675_0222357 3300047444 Bacteria 1142
207 Ga0495675_0244521 3300047444 Bacteria 1079
208 Ga0495685_098611 3300047447 Bacteria 965
209 Ga0495681_0254708 3300047470 Bacteria 692
210 Ga0496100_0299821 3300048903 Unclassified 1203
211 Ga0496100_0355899 3300048903 Bacteria 1107
212 Ga0496101_0265285 3300048904 Bacteria 1340
213 Ga0496104_0121204 3300048907 Bacteria 2511
214 Ga0496112_0034736 3300048915 Bacteria 4907
215 Ga0496112_0690310 3300048915 Bacteria 949
216 Ga0496112_1387901 3300048915 Bacteria 617
217 Ga0496114_1030442 3300048917 Bacteria 707
218 Ga0496115_0078822 3300048918 Bacteria 2680
219 Ga0496126_0000004 3300048929 Bacteria 925026
220 Ga0501306_036379 3300049127 Bacteria 750
221 Ga0501305_011460 3300049161 Bacteria 1198
222 Ga0501305_015138 3300049161 Bacteria 1086
223 Ga0501305_015903 3300049161 Bacteria 1067
224 Ga0501305_033520 3300049161 Bacteria 811
225 Ga0501305_040069 3300049161 Bacteria 759
226 Ga0501312_015249 3300049528 Bacteria 1088
227 Ga0501312_059128 3300049528 Bacteria 661
228 Ga0501312_062057 3300049528 Bacteria 649
229 Ga0501312_062177 3300049528 Bacteria 648
230 Ga0501317_030767 3300049533 Bacteria 778
231 Ga0501317_058437 3300049533 Bacteria 628
232 Ga0501318_020762 3300049534 Bacteria 829
233 Ga0501318_028137 3300049534 Bacteria 751
234 Ga0501318_031050 3300049534 Bacteria 727
235 Ga0501318_036690 3300049534 Bacteria 687
236 Ga0501321_005756 3300049537 Bacteria 1237
237 Ga0501321_017207 3300049537 Bacteria 867
238 Ga0501323_012591 3300049539 Bacteria 1035
239 Ga0501324_016629 3300049540 Bacteria 723
240 Ga0501324_026458 3300049540 Bacteria 616
241 Ga0501325_016622 3300049541 Bacteria 737
242 Ga0501330_006085 3300049546 Bacteria 783
243 nmdc:mga05p37_143677_c1 3300050507 Bacteria 2923
244 nmdc:mga0rr50_595724_c1 3300050513 Unclassified 942
245 nmdc:mga0a205_70793_c1 3300050515 Bacteria 3368
246 Ga0495601_0013780 3300053077 Unclassified 4866
247 Ga0500604_0113467 3300053151 Bacteria 901

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048917 Ga0496114_1030442 Ga0496114_1030442_16_480 154
2 3300005356 Ga0070674_100828937 Ga0070674_1008289371 166
3 3300031251 Ga0265327_10041635 Ga0265327_100416353 170
4 3300033179 Ga0307507_10030321 Ga0307507_100303216 170
5 3300005618 Ga0068864_100671677 Ga0068864_1006716772 171
6 3300005328 Ga0070676_10430405 Ga0070676_104304052 173
7 3300005338 Ga0068868_100594829 Ga0068868_1005948292 173
8 3300005356 Ga0070674_100830633 Ga0070674_1008306331 173
9 3300005548 Ga0070665_100145553 Ga0070665_1001455533 173
10 3300005617 Ga0068859_102030282 Ga0068859_1020302821 173
11 3300006931 Ga0097620_102029223 Ga0097620_1020292231 173
12 3300009177 Ga0105248_10762050 Ga0105248_107620501 173
13 3300013296 Ga0157374_11151317 Ga0157374_111513172 173
14 3300013297 Ga0157378_10462491 Ga0157378_104624912 173
15 3300025941 Ga0207711_10711559 Ga0207711_107115591 173
16 3300026023 Ga0207677_10727081 Ga0207677_107270812 173
17 3300026121 Ga0207683_10392573 Ga0207683_103925732 173
18 3300028379 Ga0268266_10896006 Ga0268266_108960062 173
19 iso_pu_bacteria 2857479173 2857480922 174
20 iso_pu_bacteria 2857632687 2857633424 174
21 iso_pu_bacteria 2870804320 2870805683 174
22 3300005338 Ga0068868_101131655 Ga0068868_1011316552 175
23 3300009176 Ga0105242_10393645 Ga0105242_103936451 175
24 3300046463 Ga0495653_0344344 Ga0495653_0344344_382_915 175
25 3300046516 Ga0495628_0198100 Ga0495628_0198100_52_585 175
26 3300046679 Ga0495623_0212515 Ga0495623_0212515_13_546 175
27 3300047319 Ga0495674_0772041 Ga0495674_0772041_26_559 175
28 3300047444 Ga0495675_0222357 Ga0495675_0222357_48_581 175
29 3300047444 Ga0495675_0244521 Ga0495675_0244521_397_930 175
30 3300049540 Ga0501324_026458 Ga0501324_026458_45_590 175
31 3300035116 Ga0373945_0032434 Ga0373945_0032434_1160_1693 176
32 3300035410 Ga0373924_0075994 Ga0373924_0075994_168_701 176
33 3300035692 Ga0373935_0009252 Ga0373935_0009252_88_621 176
34 3300035725 Ga0373947_0027680 Ga0373947_0027680_2635_3168 176
35 3300046517 Ga0495630_0086728 Ga0495630_0086728_555_1088 176
36 3300047319 Ga0495674_0051033 Ga0495674_0051033_594_1127 176
37 3300053077 Ga0495601_0013780 Ga0495601_0013780_588_1121 176
38 3300014326 Ga0157380_10943977 Ga0157380_109439771 177
39 3300031712 Ga0265342_10040545 Ga0265342_100405455 177
40 3300041453 Ga0451797_1524575 Ga0451797_1524575_12_563 177
41 3300041460 Ga0451802_0952860 Ga0451802_0952860_152_712 177
42 3300049161 Ga0501305_015903 Ga0501305_015903_490_1041 177
43 3300049528 Ga0501312_062177 Ga0501312_062177_31_582 177
44 3300049533 Ga0501317_058437 Ga0501317_058437_38_595 177
45 3300049534 Ga0501318_020762 Ga0501318_020762_23_574 177
46 3300049539 Ga0501323_012591 Ga0501323_012591_458_1009 177
47 3300049541 Ga0501325_016622 Ga0501325_016622_161_712 177
48 3300049546 Ga0501330_006085 Ga0501330_006085_26_577 177
49 3300037471 Ga0395905_0000282 Ga0395905_0000282_34163_34714 178
50 3300041999 Ga0439433_0002013 Ga0439433_0002013_486_1049 178
51 3300042134 Ga0450898_047898 Ga0450898_047898_72_635 178
52 3300005356 Ga0070674_100107807 Ga0070674_1001078073 180
53 3300009147 Ga0114129_10709118 Ga0114129_107091182 180
54 3300025937 Ga0207669_10191230 Ga0207669_101912302 180
55 3300028800 Ga0265338_10106620 Ga0265338_101066204 180
56 3300031250 Ga0265331_10100330 Ga0265331_101003302 180
57 3300031595 Ga0265313_10079549 Ga0265313_100795492 180
58 3300037312 Ga0395899_0380148 Ga0395899_0380148_304_867 180
59 3300048929 Ga0496126_0000004 Ga0496126_0000004_18187_18741 180
60 3300049161 Ga0501305_011460 Ga0501305_011460_502_1059 180
61 3300049528 Ga0501312_059128 Ga0501312_059128_46_603 180
62 3300049534 Ga0501318_036690 Ga0501318_036690_26_583 180
63 iso_pu_bacteria 2784746768 2785371723 180
64 iso_pu_bacteria 2954380949 2954383835 180
65 iso_pu_bacteria 2954691527 2954694633 180
66 iso_pu_bacteria 2954701450 2954709838 180
67 iso_pu_bacteria 2954711539 2954714134 180
68 iso_pu_bacteria 2954721474 2954724087 180
69 iso_pu_bacteria 2954731030 2954737752 180
70 iso_pu_bacteria 2954740390 2954742985 180
71 iso_pu_bacteria 2954749733 2954756588 180
72 iso_pu_bacteria 2954759201 2954761943 180
73 3300005329 Ga0070683_100717503 Ga0070683_1007175031 181
74 3300005334 Ga0068869_100416294 Ga0068869_1004162941 181
75 3300005336 Ga0070680_100118119 Ga0070680_1001181192 181
76 3300005336 Ga0070680_100221002 Ga0070680_1002210022 181
77 3300005339 Ga0070660_100150326 Ga0070660_1001503261 181
78 3300005364 Ga0070673_100590684 Ga0070673_1005906841 181
79 3300005366 Ga0070659_100060616 Ga0070659_1000606164 181
80 3300005434 Ga0070709_10142600 Ga0070709_101426002 181
81 3300005435 Ga0070714_100051232 Ga0070714_1000512325 181
82 3300005435 Ga0070714_100565530 Ga0070714_1005655302 181
83 3300005436 Ga0070713_100007418 Ga0070713_1000074184 181
84 3300005436 Ga0070713_100081747 Ga0070713_1000817474 181
85 3300005458 Ga0070681_10037688 Ga0070681_100376884 181
86 3300005458 Ga0070681_10175815 Ga0070681_101758153 181
87 3300005471 Ga0070698_100285185 Ga0070698_1002851851 181
88 3300005518 Ga0070699_100081592 Ga0070699_1000815923 181
89 3300005518 Ga0070699_100706827 Ga0070699_1007068272 181
90 3300005530 Ga0070679_100060511 Ga0070679_1000605111 181
91 3300005530 Ga0070679_100435225 Ga0070679_1004352252 181
92 3300005530 Ga0070679_100732041 Ga0070679_1007320411 181
93 3300005535 Ga0070684_100256694 Ga0070684_1002566941 181
94 3300005536 Ga0070697_100091576 Ga0070697_1000915763 181
95 3300005539 Ga0068853_100027292 Ga0068853_1000272922 181
96 3300005547 Ga0070693_100839000 Ga0070693_1008390001 181
97 3300005549 Ga0070704_100774078 Ga0070704_1007740782 181
98 3300005563 Ga0068855_100027993 Ga0068855_1000279936 181
99 3300005563 Ga0068855_100268250 Ga0068855_1002682502 181
100 3300005564 Ga0070664_100001062 Ga0070664_1000010622 181
101 3300005577 Ga0068857_100014889 Ga0068857_1000148892 181
102 3300005616 Ga0068852_100056213 Ga0068852_1000562134 181
103 3300005616 Ga0068852_100208133 Ga0068852_1002081332 181
104 3300005618 Ga0068864_100112521 Ga0068864_1001125212 181
105 3300006028 Ga0070717_10012396 Ga0070717_100123964 181
106 3300006173 Ga0070716_100081728 Ga0070716_1000817282 181
107 3300006173 Ga0070716_100179161 Ga0070716_1001791612 181
108 3300006358 Ga0068871_100577067 Ga0068871_1005770672 181
109 3300006871 Ga0075434_100811637 Ga0075434_1008116372 181
110 3300009545 Ga0105237_11050549 Ga0105237_110505491 181
111 3300013100 Ga0157373_10054570 Ga0157373_100545702 181
112 3300013104 Ga0157370_10079267 Ga0157370_100792672 181
113 3300013105 Ga0157369_10026476 Ga0157369_100264766 181
114 3300013307 Ga0157372_10874867 Ga0157372_108748671 181
115 3300013308 Ga0157375_10104499 Ga0157375_101044992 181
116 3300014969 Ga0157376_10000681 Ga0157376_100006812 181
117 3300020069 Ga0197907_10641315 Ga0197907_106413151 181
118 3300020080 Ga0206350_10367507 Ga0206350_103675072 181
119 3300020610 Ga0154015_1622564 Ga0154015_16225642 181
120 3300024225 Ga0224572_1020377 Ga0224572_10203773 181
121 3300025905 Ga0207685_10084314 Ga0207685_100843142 181
122 3300025908 Ga0207643_10281316 Ga0207643_102813161 181
123 3300025910 Ga0207684_10153709 Ga0207684_101537092 181
124 3300025912 Ga0207707_10263471 Ga0207707_102634712 181
125 3300025915 Ga0207693_10255884 Ga0207693_102558841 181
126 3300025917 Ga0207660_10050125 Ga0207660_100501252 181
127 3300025917 Ga0207660_10421786 Ga0207660_104217861 181
128 3300025919 Ga0207657_10112426 Ga0207657_101124263 181
129 3300025920 Ga0207649_10109969 Ga0207649_101099692 181
130 3300025920 Ga0207649_10266983 Ga0207649_102669832 181
131 3300025921 Ga0207652_10147695 Ga0207652_101476952 181
132 3300025921 Ga0207652_10519564 Ga0207652_105195641 181
133 3300025926 Ga0207659_10256429 Ga0207659_102564291 181
134 3300025928 Ga0207700_10017482 Ga0207700_100174822 181
135 3300025929 Ga0207664_10043738 Ga0207664_100437384 181
136 3300025929 Ga0207664_10281244 Ga0207664_102812442 181
137 3300025929 Ga0207664_10932247 Ga0207664_109322471 181
138 3300025932 Ga0207690_10111127 Ga0207690_101111273 181
139 3300025939 Ga0207665_10030728 Ga0207665_100307282 181
140 3300025939 Ga0207665_10146090 Ga0207665_101460902 181
141 3300025939 Ga0207665_10175164 Ga0207665_101751642 181
142 3300025942 Ga0207689_10318850 Ga0207689_103188502 181
143 3300025944 Ga0207661_10489945 Ga0207661_104899451 181
144 3300025945 Ga0207679_10262648 Ga0207679_102626481 181
145 3300025949 Ga0207667_10123098 Ga0207667_101230982 181
146 3300025949 Ga0207667_10400383 Ga0207667_104003831 181
147 3300025960 Ga0207651_10665476 Ga0207651_106654761 181
148 3300026041 Ga0207639_10165610 Ga0207639_101656103 181
149 3300026078 Ga0207702_10704193 Ga0207702_107041932 181
150 3300026095 Ga0207676_10965215 Ga0207676_109652151 181
151 3300026116 Ga0207674_10002271 Ga0207674_1000227123 181
152 3300026142 Ga0207698_10017152 Ga0207698_100171524 181
153 3300028381 Ga0268264_10190440 Ga0268264_101904402 181
154 3300030760 Ga0265762_1018631 Ga0265762_10186312 181
155 3300031344 Ga0265316_10124158 Ga0265316_101241582 181
156 3300031665 Ga0316575_10177279 Ga0316575_101772791 181
157 3300031691 Ga0316579_10019407 Ga0316579_100194073 181
158 3300031728 Ga0316578_10096189 Ga0316578_100961892 181
159 3300032137 Ga0316585_10137347 Ga0316585_101373471 181
160 3300032139 Ga0316580_10070729 Ga0316580_100707292 181
161 3300035398 Ga0316574_0051190 Ga0316574_0051190_1625_2191 181
162 3300035692 Ga0373935_0157665 Ga0373935_0157665_200_781 181
163 3300036647 Ga0316582_0012809 Ga0316582_0012809_2637_3203 181
164 3300036712 Ga0316584_0303472 Ga0316584_0303472_10_576 181
165 3300037418 Ga0395900_0802602 Ga0395900_0802602_149_709 181
166 3300044842 Ga0466957_0620777 Ga0466957_0620777_32_595 181
167 3300045836 Ga0466958_0186945 Ga0466958_0186945_193_756 181
168 3300045976 Ga0466967_0204996 Ga0466967_0204996_659_1219 181
169 3300045976 Ga0466967_0333526 Ga0466967_0333526_826_1389 181
170 3300046663 Ga0495635_0146422 Ga0495635_0146422_119_679 181
171 3300047317 Ga0495604_0062438 Ga0495604_0062438_1756_2316 181
172 3300047444 Ga0495675_0060048 Ga0495675_0060048_1520_2080 181
173 3300048903 Ga0496100_0355899 Ga0496100_0355899_212_778 181
174 3300048904 Ga0496101_0265285 Ga0496101_0265285_384_950 181
175 3300048907 Ga0496104_0121204 Ga0496104_0121204_1747_2304 181
176 3300048915 Ga0496112_0034736 Ga0496112_0034736_3813_4370 181
177 3300048915 Ga0496112_0690310 Ga0496112_0690310_366_923 181
178 3300048915 Ga0496112_1387901 Ga0496112_1387901_35_592 181
179 3300048918 Ga0496115_0078822 Ga0496115_0078822_980_1546 181
180 3300049127 Ga0501306_036379 Ga0501306_036379_10_570 181
181 3300049161 Ga0501305_015138 Ga0501305_015138_219_779 181
182 3300049161 Ga0501305_033520 Ga0501305_033520_19_579 181
183 3300049161 Ga0501305_040069 Ga0501305_040069_186_746 181
184 3300049528 Ga0501312_015249 Ga0501312_015249_263_823 181
185 3300049533 Ga0501317_030767 Ga0501317_030767_16_576 181
186 3300049534 Ga0501318_028137 Ga0501318_028137_67_627 181
187 3300049534 Ga0501318_031050 Ga0501318_031050_44_604 181
188 3300049537 Ga0501321_017207 Ga0501321_017207_24_575 181
189 3300050513 nmdc:mga0rr50_595724_c1 nmdc:mga0rr50_595724_c1_235_801 181
190 3300005563 Ga0068855_100437266 Ga0068855_1004372662 182
191 3300005843 Ga0068860_100004312 Ga0068860_10000431214 182
192 3300006852 Ga0075433_10066259 Ga0075433_100662594 182
193 3300009093 Ga0105240_10000837 Ga0105240_1000083743 182
194 3300009147 Ga0114129_10019187 Ga0114129_100191876 182
195 3300009545 Ga0105237_10014085 Ga0105237_100140857 182
196 3300009553 Ga0105249_10220211 Ga0105249_102202111 182
197 3300010375 Ga0105239_10509599 Ga0105239_105095992 182
198 3300013105 Ga0157369_10127333 Ga0157369_101273332 182
199 3300025912 Ga0207707_10881115 Ga0207707_108811151 182
200 3300025913 Ga0207695_10003257 Ga0207695_1000325710 182
201 3300025914 Ga0207671_10076966 Ga0207671_100769664 182
202 3300025949 Ga0207667_10264345 Ga0207667_102643452 182
203 3300026142 Ga0207698_10472521 Ga0207698_104725212 182
204 3300049528 Ga0501312_062057 Ga0501312_062057_58_624 182
205 3300050507 nmdc:mga05p37_143677_c1 nmdc:mga05p37_143677_c1_631_1188 182
206 3300050515 nmdc:mga0a205_70793_c1 nmdc:mga0a205_70793_c1_2046_2603 182
207 3300053151 Ga0500604_0113467 Ga0500604_0113467_155_748 182
208 3300004799 Ga0058863_10089917 Ga0058863_100899171 183
209 3300005327 Ga0070658_10308722 Ga0070658_103087222 183
210 3300005336 Ga0070680_100237400 Ga0070680_1002374002 183
211 3300005366 Ga0070659_100189291 Ga0070659_1001892912 183
212 3300005458 Ga0070681_10267321 Ga0070681_102673212 183
213 3300005458 Ga0070681_10882186 Ga0070681_108821861 183
214 3300005530 Ga0070679_100286706 Ga0070679_1002867061 183
215 3300005530 Ga0070679_100316081 Ga0070679_1003160811 183
216 3300005614 Ga0068856_101230190 Ga0068856_1012301902 183
217 3300005841 Ga0068863_100052129 Ga0068863_1000521292 183
218 3300006173 Ga0070716_101054389 Ga0070716_1010543891 183
219 3300009093 Ga0105240_10036181 Ga0105240_100361814 183
220 3300009177 Ga0105248_10124877 Ga0105248_101248774 183
221 3300013102 Ga0157371_10348074 Ga0157371_103480742 183
222 3300013104 Ga0157370_10180595 Ga0157370_101805952 183
223 3300013105 Ga0157369_10069606 Ga0157369_100696062 183
224 3300013306 Ga0163162_10576211 Ga0163162_105762112 183
225 3300013307 Ga0157372_10473955 Ga0157372_104739551 183
226 3300020610 Ga0154015_1472862 Ga0154015_14728624 183
227 3300022467 Ga0224712_10351454 Ga0224712_103514541 183
228 3300025921 Ga0207652_10294981 Ga0207652_102949812 183
229 3300025928 Ga0207700_10359435 Ga0207700_103594352 183
230 3300025941 Ga0207711_10349394 Ga0207711_103493942 183
231 3300026088 Ga0207641_10325631 Ga0207641_103256313 183
232 3300037068 Ga0373925_0201498 Ga0373925_0201498_27_590 183
233 3300037418 Ga0395900_0677165 Ga0395900_0677165_160_717 183
234 3300037466 Ga0395898_0538028 Ga0395898_0538028_173_769 183
235 3300038443 Ga0395901_0342600 Ga0395901_0342600_97_654 183
236 3300046472 Ga0495580_0000335 Ga0495580_0000335_32980_33543 183
237 3300046531 Ga0495665_0084170 Ga0495665_0084170_901_1464 183
238 3300048903 Ga0496100_0299821 Ga0496100_0299821_525_1082 183
239 3300003162 Ga0006778J45830_1020188 Ga0006778J45830_10201881 184
240 3300003163 Ga0006759J45824_1023275 Ga0006759J45824_10232751 184
241 3300003323 rootH1_10013370 rootH1_100133702 184
242 3300003574 Ga0007410J51695_1023519 Ga0007410J51695_10235191 184
243 3300003575 Ga0007409J51694_1021995 Ga0007409J51694_10219951 184
244 3300003577 Ga0007416J51690_1023669 Ga0007416J51690_10236691 184
245 3300003693 Ga0032354_1008865 Ga0032354_10088651 184
246 3300005456 Ga0070678_100760499 Ga0070678_1007604991 184
247 3300005539 Ga0068853_100125665 Ga0068853_1001256651 184
248 3300011119 Ga0105246_10028658 Ga0105246_100286583 184
249 3300041404 Ga0439436_0004568 Ga0439436_0004568_3485_4135 184
250 3300041492 Ga0451835_0941007 Ga0451835_0941007_68_667 184
251 3300041512 Ga0451853_3106819 Ga0451853_3106819_265_819 184
252 3300042014 Ga0439457_001577 Ga0439457_001577_775_1425 184
253 3300044656 Ga0466969_0224976 Ga0466969_0224976_60_704 184
254 3300044901 Ga0466960_0001177 Ga0466960_0001177_3064_3675 184
255 3300046452 Ga0495617_010906 Ga0495617_010906_2254_2868 184
256 3300046455 Ga0495603_0055404 Ga0495603_0055404_900_1508 184
257 3300047447 Ga0495685_098611 Ga0495685_098611_364_918 184
258 3300047470 Ga0495681_0254708 Ga0495681_0254708_128_682 184
259 3300049537 Ga0501321_005756 Ga0501321_005756_450_1097 184
260 3300049540 Ga0501324_016629 Ga0501324_016629_73_684 184
261 iso_pu_bacteria 2862290372 2862290575 184

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04264

YceI

YceI-like domain

39

207

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bwl-assembly1.cif.gz_A structure of antibiotic sequester from pseudomonas aerurinosa 0.9428 11 183
7bwl-assembly1.cif.gz_A structure of antibiotic sequester from pseudomonas aerurinosa 0.9374 11 183
1y0g-assembly2.cif.gz_D crystal structure of the escherichia coli ycei protein, structural genomics 0.9352 11 184
1y0g-assembly2.cif.gz_D crystal structure of the escherichia coli ycei protein, structural genomics 0.9298 11 184
1wub-assembly1.cif.gz_A crystal structure of the polyisoprenoid-binding protein, tt1927b, from thermus thermophilus hb8 0.9236 12 184
ID Description Score Start End Superfamily
af_P0A8X2_23_191_2.40.128.110 Mainly Beta;Beta Barrel;Lipocalin;Lipid/polyisoprenoid-binding, YceI-like 0.9375 11 184 2.40.128.110
af_P0A8X2_23_191_2.40.128.110 Mainly Beta;Beta Barrel;Lipocalin;Lipid/polyisoprenoid-binding, YceI-like 0.9321 11 184 2.40.128.110
1wubA00 Mainly Beta;Beta Barrel;Lipocalin;Lipid/polyisoprenoid-binding, YceI-like 0.9236 12 184 2.40.128.110
af_Q2FUS9_3_167_2.40.128.110 Mainly Beta;Beta Barrel;Lipocalin;Lipid/polyisoprenoid-binding, YceI-like 0.9105 15 179 2.40.128.110
1wubA00 Mainly Beta;Beta Barrel;Lipocalin;Lipid/polyisoprenoid-binding, YceI-like 0.8983 12 184 2.40.128.110
ID Description Score Start End GO Terms
AF-A0A1G4AKB1-F1-model_v4 Lipid/polyisoprenoid-binding YceI-like domain-containing protein 0.9741 11 184
AF-A0A850D6W1-F1-model_v4 deleted 0.9719 1 151
AF-A0A535VQB0-F1-model_v4 YceI family protein 0.9662 12 184
AF-A0A231P790-F1-model_v4 Polyisoprenoid-binding protein 0.9658 1 184
AF-A0A1J7BJ73-F1-model_v4 Lipid/polyisoprenoid-binding YceI-like domain-containing protein 0.9634 10 184

Feature Viewer

pLDDT pTM Quality
91.69 0.88 High
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Predicted Structure (AlphaFold2)

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