F370278

General Info

Members Datasets Scaffolds Average Seq Length
261 142 522 484

Family's Representative Sequence

Representative Sequence 3300006880|Ga0075429_100124211|Ga0075429_1001242112
Length 523
Sequence LGRALFGKADLKVRLYERSLYERRGGSLDPPPLRIAESTLHRSLLVETVTGRTMAELRAARDAVTRADMVELRLDDVQDIDVAGALAGRMLPAIATCRPVWEGGRFDGSEERRHSILREALERGAEYVDVEWRAGFADLIARDPQRVVLSSHDFQRVPEDVAARATAMRQTGAGTIKIAIPAARLTDALALLPIGAGGDAVVIAMGDAGLPSRLLASRFGSRWTYAGDAIAPGQIPASRMLDEFRFRSVGLKTAIYGVVGNVGLHSKSPVMHNAAFAAVGLDAVYVPLRAADFDDFLTFADAMHVTGASVTIPFKLDALRAADGVDMLTERVGAANTLYRIGDRWEARNTDVDGFLDPLDAMYPGSLEEARVAVMGAGGAARAVVVALVTRGARVTVHARRQEQALDVAARCGAAAGAWPPPGGSWDMLVNCTPLGGPSARDQSPLPGGPFTGKLVYDLTYGDAETPLLREARRADCVTLDGLPMLVAQAERQFEWWTGSEPEEGVMKAALLNQRGREQLVRG

Samples

Sample ID Description Type Environment
1 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
49 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
53 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
54 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
110 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
111 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
112 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
113 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
114 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
115 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
116 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
130 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
133 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
134 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
138 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
139 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
140 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
141 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
142 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.77
Rhizosphere 99.23
Stem 0
Stem Tuber 0
Unclassified 7.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075429_100124211 3300006880 Unclassified 2257
2 JGI25406J46586_10000194 3300003203 Bacteria 26925
3 JGI25406J46586_10002224 3300003203 Bacteria 9154
4 Ga0065704_10078290 3300005289 Bacteria 4471
5 Ga0065707_10002361 3300005295 Bacteria 4686
6 Ga0070676_10002620 3300005328 Bacteria 9254
7 Ga0070676_10084092 3300005328 Unclassified 1937
8 Ga0070683_100133826 3300005329 Bacteria 2347
9 Ga0070690_100061208 3300005330 Bacteria 2425
10 Ga0070690_100081326 3300005330 Bacteria 2119
11 Ga0070670_100003547 3300005331 Bacteria 12978
12 Ga0070670_100036057 3300005331 Bacteria 4257
13 Ga0068869_100012471 3300005334 Bacteria 5618
14 Ga0070666_10056666 3300005335 Bacteria 2647
15 Ga0070689_100078489 3300005340 Bacteria 2589
16 Ga0070689_100082968 3300005340 Bacteria 2519
17 Ga0070692_10050245 3300005345 Bacteria 2165
18 Ga0070668_100106470 3300005347 Bacteria 2228
19 Ga0070669_100008326 3300005353 Bacteria 7403
20 Ga0070669_100054232 3300005353 Bacteria 2936
21 Ga0070669_100183586 3300005353 Bacteria 1638
22 Ga0070675_100000767 3300005354 Bacteria 22376
23 Ga0070675_100002513 3300005354 Bacteria 13729
24 Ga0070675_100008906 3300005354 Bacteria 7800
25 Ga0070675_100031954 3300005354 Bacteria 4257
26 Ga0070675_100085608 3300005354 Unclassified 2634
27 Ga0070671_100001437 3300005355 Bacteria 17796
28 Ga0070674_100045699 3300005356 Bacteria 2992
29 Ga0070674_100171022 3300005356 Bacteria 1656
30 Ga0070673_100024894 3300005364 Bacteria 4396
31 Ga0070673_100183254 3300005364 Bacteria 1793
32 Ga0070688_100007529 3300005365 Bacteria 5875
33 Ga0070688_100015668 3300005365 Bacteria 4319
34 Ga0070701_10009621 3300005438 Bacteria 4240
35 Ga0070705_100000088 3300005440 Bacteria 51329
36 Ga0070700_100004005 3300005441 Bacteria 7658
37 Ga0070700_100005040 3300005441 Bacteria 6967
38 Ga0070694_100031347 3300005444 Bacteria 3486
39 Ga0070663_100030151 3300005455 Bacteria 3714
40 Ga0070678_100038299 3300005456 Bacteria 3374
41 Ga0068867_100000734 3300005459 Bacteria 21968
42 Ga0068867_100001765 3300005459 Bacteria 15044
43 Ga0070685_10094225 3300005466 Bacteria 1818
44 Ga0070707_100066949 3300005468 Bacteria 3453
45 Ga0070698_100005658 3300005471 Bacteria 13683
46 Ga0070698_100109210 3300005471 Bacteria 2733
47 Ga0070699_100005844 3300005518 Bacteria 10750
48 Ga0070699_100010040 3300005518 Bacteria 8195
49 Ga0070684_100094827 3300005535 Bacteria 2658
50 Ga0070672_100001455 3300005543 Bacteria 14663
51 Ga0070672_100003541 3300005543 Bacteria 10120
52 Ga0070672_100092520 3300005543 Bacteria 2441
53 Ga0070672_100105901 3300005543 Bacteria 2287
54 Ga0070686_100032873 3300005544 Unclassified 3183
55 Ga0070695_100000021 3300005545 Bacteria 60669
56 Ga0070695_100016245 3300005545 Unclassified 4503
57 Ga0070696_100000016 3300005546 Bacteria 76371
58 Ga0070696_100054928 3300005546 Unclassified 2777
59 Ga0070704_100001217 3300005549 Bacteria 13537
60 Ga0070704_100040594 3300005549 Bacteria 3205
61 Ga0070704_100061323 3300005549 Bacteria 2691
62 Ga0070704_100064257 3300005549 Bacteria 2637
63 Ga0070664_100080227 3300005564 Bacteria 2810
64 Ga0070664_100080695 3300005564 Bacteria 2802
65 Ga0070702_100053277 3300005615 Bacteria 2324
66 Ga0068859_100002429 3300005617 Bacteria 18976
67 Ga0068859_100003411 3300005617 Bacteria 16164
68 Ga0068859_100007856 3300005617 Bacteria 10827
69 Ga0068859_100034155 3300005617 Bacteria 5105
70 Ga0068859_100042299 3300005617 Bacteria 4577
71 Ga0068859_100207759 3300005617 Bacteria 2044
72 Ga0068864_100003195 3300005618 Bacteria 13537
73 Ga0068864_100202704 3300005618 Bacteria 1823
74 Ga0068861_100012891 3300005719 Bacteria 5837
75 Ga0068861_100079699 3300005719 Unclassified 2561
76 Ga0068870_10005040 3300005840 Bacteria 5736
77 Ga0068863_100025758 3300005841 Bacteria 5610
78 Ga0068863_100122368 3300005841 Bacteria 2482
79 Ga0068863_100142848 3300005841 Bacteria 2288
80 Ga0068858_100004517 3300005842 Bacteria 13641
81 Ga0068858_100026400 3300005842 Bacteria 5398
82 Ga0068860_100173758 3300005843 Bacteria 2082
83 Ga0068862_100002348 3300005844 Bacteria 16851
84 Ga0081455_10099267 3300005937 Bacteria 2342
85 Ga0081539_10000056 3300005985 Bacteria 256522
86 Ga0081539_10000106 3300005985 Bacteria 195771
87 Ga0081539_10001461 3300005985 Bacteria 40211
88 Ga0070712_100036552 3300006175 Bacteria 3343
89 Ga0068871_100179098 3300006358 Bacteria 1821
90 Ga0075428_100016540 3300006844 Bacteria 8145
91 Ga0075428_100112734 3300006844 Bacteria 2962
92 Ga0075428_100114447 3300006844 Bacteria 2939
93 Ga0075430_100052036 3300006846 Unclassified 3449
94 Ga0075430_100076292 3300006846 Bacteria 2809
95 Ga0075431_100002428 3300006847 Bacteria 17938
96 Ga0075431_100013438 3300006847 Bacteria 8271
97 Ga0075433_10013377 3300006852 Bacteria 6669
98 Ga0075433_10046989 3300006852 Bacteria 3755
99 Ga0075434_100003140 3300006871 Bacteria 14727
100 Ga0075434_100026334 3300006871 Bacteria 5696
101 Ga0075429_100007725 3300006880 Bacteria 9334
102 Ga0097620_100002429 3300006931 Bacteria 18976
103 Ga0097620_100003411 3300006931 Bacteria 16164
104 Ga0097620_100007856 3300006931 Bacteria 10827
105 Ga0097620_100034154 3300006931 Bacteria 5105
106 Ga0097620_100042299 3300006931 Bacteria 4577
107 Ga0097620_100207766 3300006931 Bacteria 2044
108 Ga0075435_100025627 3300007076 Bacteria 4592
109 Ga0111539_10001329 3300009094 Bacteria 32962
110 Ga0111539_10005771 3300009094 Bacteria 16002
111 Ga0111539_10015695 3300009094 Bacteria 9415
112 Ga0111539_10025646 3300009094 Bacteria 7224
113 Ga0111539_10030261 3300009094 Bacteria 6583
114 Ga0111539_10077666 3300009094 Bacteria 3907
115 Ga0111539_10181750 3300009094 Bacteria 2456
116 Ga0111539_10259629 3300009094 Unclassified 2022
117 Ga0114129_10001646 3300009147 Bacteria 30357
118 Ga0114129_10007770 3300009147 Bacteria 15258
119 Ga0114129_10020210 3300009147 Bacteria 9477
120 Ga0114129_10027839 3300009147 Bacteria 8004
121 Ga0114129_10125855 3300009147 Bacteria 3523
122 Ga0114129_10252133 3300009147 Unclassified 2369
123 Ga0105243_10022881 3300009148 Bacteria 4751
124 Ga0105243_10090531 3300009148 Bacteria 2518
125 Ga0105242_10013562 3300009176 Bacteria 6304
126 Ga0105248_10004319 3300009177 Bacteria 15719
127 Ga0105248_10052579 3300009177 Bacteria 4571
128 Ga0105238_10010341 3300009551 Bacteria 9362
129 Ga0105249_10002594 3300009553 Bacteria 15648
130 Ga0157375_10014642 3300013308 Bacteria 7005
131 Ga0157375_10185671 3300013308 Bacteria 2232
132 Ga0163163_10009666 3300014325 Bacteria 8627
133 Ga0163163_10037487 3300014325 Bacteria 4716
134 Ga0163163_10095244 3300014325 Bacteria 2996
135 Ga0163163_10152913 3300014325 Bacteria 2351
136 Ga0157377_10033569 3300014745 Bacteria 2802
137 Ga0157379_10061138 3300014968 Bacteria 3369
138 Ga0207682_10005286 3300025893 Bacteria 5279
139 Ga0207682_10022519 3300025893 Bacteria 2482
140 Ga0207710_10023063 3300025900 Bacteria 2673
141 Ga0207645_10046072 3300025907 Bacteria 2786
142 Ga0207643_10011464 3300025908 Bacteria 4787
143 Ga0207707_10018962 3300025912 Bacteria 5999
144 Ga0207693_10104467 3300025915 Bacteria 2222
145 Ga0207660_10130328 3300025917 Bacteria 1914
146 Ga0207662_10019137 3300025918 Bacteria 3893
147 Ga0207646_10066765 3300025922 Bacteria 3212
148 Ga0207646_10074796 3300025922 Bacteria 3026
149 Ga0207681_10020687 3300025923 Bacteria 4174
150 Ga0207681_10022678 3300025923 Bacteria 4006
151 Ga0207681_10030407 3300025923 Bacteria 3521
152 Ga0207650_10014037 3300025925 Bacteria 5562
153 Ga0207650_10015727 3300025925 Bacteria 5274
154 Ga0207650_10090335 3300025925 Unclassified 2339
155 Ga0207659_10001311 3300025926 Bacteria 14856
156 Ga0207659_10002377 3300025926 Bacteria 11202
157 Ga0207659_10045993 3300025926 Bacteria 3080
158 Ga0207659_10051220 3300025926 Unclassified 2935
159 Ga0207659_10059649 3300025926 Unclassified 2743
160 Ga0207659_10067158 3300025926 Bacteria 2604
161 Ga0207644_10040836 3300025931 Bacteria 3280
162 Ga0207644_10068614 3300025931 Bacteria 2587
163 Ga0207706_10134513 3300025933 Bacteria 2174
164 Ga0207686_10058083 3300025934 Bacteria 2438
165 Ga0207709_10009263 3300025935 Bacteria 5424
166 Ga0207709_10055813 3300025935 Bacteria 2442
167 Ga0207670_10005578 3300025936 Bacteria 6917
168 Ga0207670_10013643 3300025936 Bacteria 4798
169 Ga0207670_10053712 3300025936 Bacteria 2716
170 Ga0207704_10028457 3300025938 Bacteria 3101
171 Ga0207691_10014956 3300025940 Bacteria 7392
172 Ga0207691_10018561 3300025940 Bacteria 6592
173 Ga0207691_10024282 3300025940 Bacteria 5701
174 Ga0207691_10072025 3300025940 Bacteria 3117
175 Ga0207691_10118807 3300025940 Bacteria 2345
176 Ga0207691_10217880 3300025940 Bacteria 1656
177 Ga0207711_10010614 3300025941 Bacteria 7660
178 Ga0207711_10053394 3300025941 Bacteria 3466
179 Ga0207689_10002031 3300025942 Bacteria 19120
180 Ga0207661_10044129 3300025944 Bacteria 3522
181 Ga0207679_10013700 3300025945 Bacteria 5317
182 Ga0207679_10088465 3300025945 Bacteria 2388
183 Ga0207651_10013644 3300025960 Bacteria 4659
184 Ga0207651_10016149 3300025960 Bacteria 4363
185 Ga0207651_10028452 3300025960 Bacteria 3526
186 Ga0207651_10050642 3300025960 Bacteria 2821
187 Ga0207651_10108447 3300025960 Bacteria 2078
188 Ga0207703_10006215 3300026035 Bacteria 9559
189 Ga0207703_10024256 3300026035 Bacteria 4772
190 Ga0207703_10107003 3300026035 Bacteria 2380
191 Ga0207678_10022650 3300026067 Bacteria 5501
192 Ga0207708_10003696 3300026075 Bacteria 11293
193 Ga0207708_10005890 3300026075 Bacteria 9066
194 Ga0207641_10021486 3300026088 Bacteria 5303
195 Ga0207641_10076868 3300026088 Bacteria 2888
196 Ga0207648_10000338 3300026089 Bacteria 51422
197 Ga0207648_10006068 3300026089 Bacteria 12048
198 Ga0207676_10026653 3300026095 Bacteria 4298
199 Ga0207676_10114080 3300026095 Bacteria 2266
200 Ga0207674_10065176 3300026116 Bacteria 3673
201 Ga0207675_100001689 3300026118 Bacteria 22086
202 Ga0207428_10002109 3300027907 Bacteria 20038
203 Ga0207428_10014511 3300027907 Bacteria 6838
204 Ga0207428_10041054 3300027907 Bacteria 3747
205 Ga0268264_10003629 3300028381 Bacteria 13273
206 Ga0307405_10000969 3300031731 Bacteria 11527
207 Ga0307416_100004059 3300032002 Bacteria 8750
208 Ga0307415_100001772 3300032126 Bacteria 10554
209 Ga0373937_0028011 3300036401 Bacteria 5097
210 Ga0451576_0017891 3300045051 Bacteria 7783
211 Ga0495603_0128327 3300046455 Unclassified 1477
212 Ga0495594_0016261 3300046499 Bacteria 3918
213 Ga0495598_0021264 3300046537 Unclassified 1724
214 Ga0495609_0016782 3300046538 Bacteria 3410
215 Ga0495621_0028642 3300046539 Unclassified 1895
216 Ga0495656_0009776 3300046615 Bacteria 3461
217 Ga0495659_0004925 3300046664 Bacteria 4204
218 Ga0495659_0009619 3300046664 Bacteria 3090
219 Ga0495588_0006791 3300046674 Bacteria 5179
220 Ga0495676_0063121 3300047321 Bacteria 2889
221 Ga0496108_0030095 3300048911 Bacteria 4500
222 Ga0496109_0089633 3300048912 Unclassified 2844
223 Ga0501031_0079087 3300049568 Unclassified 2143
224 Ga0501036_0042167 3300049572 Bacteria 3864
225 Ga0501036_0056065 3300049572 Bacteria 3338
226 Ga0501039_0016820 3300049575 Bacteria 5606
227 Ga0501040_0009718 3300049576 Bacteria 6279
228 Ga0501040_0043243 3300049576 Bacteria 3070
229 Ga0501041_0013990 3300049577 Bacteria 4761
230 Ga0501041_0023919 3300049577 Bacteria 3665
231 Ga0501042_0026014 3300049578 Bacteria 4113
232 Ga0501042_0087924 3300049578 Bacteria 2229
233 Ga0501046_0015074 3300049580 Bacteria 6500
234 Ga0501046_0045063 3300049580 Bacteria 3506
235 Ga0501072_0022501 3300049588 Bacteria 4889
236 Ga0501076_0035241 3300049592 Bacteria 3916
237 Ga0501080_0159303 3300049742 Bacteria 2085
238 Ga0501081_0007968 3300049743 Bacteria 6873
239 Ga0501081_0020931 3300049743 Bacteria 4365
240 Ga0501045_0008124 3300049824 Bacteria 7310
241 nmdc:mga05p37_24839_c1 3300050507 Bacteria 7285
242 nmdc:mga05p37_354937_c1 3300050507 Bacteria 1725
243 nmdc:mga05p37_4938_c1 3300050507 Bacteria 15621
244 nmdc:mga05p37_86099_c1 3300050507 Bacteria 3873
245 nmdc:mga09592_39042_c1 3300050508 Bacteria 3987
246 nmdc:mga0qj67_74218_c1 3300050509 Bacteria 2718
247 nmdc:mga06r32_82474_c1 3300050510 Bacteria 3132
248 nmdc:mga08y16_10781_c1 3300050511 Bacteria 9593
249 nmdc:mga08y16_1518_c1 3300050511 Bacteria 23353
250 nmdc:mga08y16_191664_c1 3300050511 Bacteria 2120
251 nmdc:mga08y16_266410_c1 3300050511 Unclassified 1769
252 nmdc:mga08y16_3650_c1 3300050511 Bacteria 16005
253 nmdc:mga0n895_154752_c1 3300050512 Unclassified 2323
254 nmdc:mga0a205_7220_c1 3300050515 Bacteria 10044
255 nmdc:mga0a205_9695_c2 3300050515 Bacteria 7908
256 Ga0501084_0010843 3300054114 Bacteria 7549
257 Ga0501084_0078544 3300054114 Bacteria 2766
258 Ga0590071_001405 3300059421 Bacteria 6377
259 Ga0590074_003496 3300059423 Bacteria 2597
260 Ga0590077_001648 3300059426 Bacteria 5117
261 Ga0530510_0011052 3300061734 Bacteria 6332
262 Ga0075429_100124211
263 JGI25406J46586_10000194
264 JGI25406J46586_10002224
265 Ga0065704_10078290
266 Ga0065707_10002361
267 Ga0070676_10002620
268 Ga0070676_10084092
269 Ga0070683_100133826
270 Ga0070690_100061208
271 Ga0070690_100081326
272 Ga0070670_100003547
273 Ga0070670_100036057
274 Ga0068869_100012471
275 Ga0070666_10056666
276 Ga0070689_100078489
277 Ga0070689_100082968
278 Ga0070692_10050245
279 Ga0070668_100106470
280 Ga0070669_100008326
281 Ga0070669_100054232
282 Ga0070669_100183586
283 Ga0070675_100000767
284 Ga0070675_100002513
285 Ga0070675_100008906
286 Ga0070675_100031954
287 Ga0070675_100085608
288 Ga0070671_100001437
289 Ga0070674_100045699
290 Ga0070674_100171022
291 Ga0070673_100024894
292 Ga0070673_100183254
293 Ga0070688_100007529
294 Ga0070688_100015668
295 Ga0070701_10009621
296 Ga0070705_100000088
297 Ga0070700_100004005
298 Ga0070700_100005040
299 Ga0070694_100031347
300 Ga0070663_100030151
301 Ga0070678_100038299
302 Ga0068867_100000734
303 Ga0068867_100001765
304 Ga0070685_10094225
305 Ga0070707_100066949
306 Ga0070698_100005658
307 Ga0070698_100109210
308 Ga0070699_100005844
309 Ga0070699_100010040
310 Ga0070684_100094827
311 Ga0070672_100001455
312 Ga0070672_100003541
313 Ga0070672_100092520
314 Ga0070672_100105901
315 Ga0070686_100032873
316 Ga0070695_100000021
317 Ga0070695_100016245
318 Ga0070696_100000016
319 Ga0070696_100054928
320 Ga0070704_100001217
321 Ga0070704_100040594
322 Ga0070704_100061323
323 Ga0070704_100064257
324 Ga0070664_100080227
325 Ga0070664_100080695
326 Ga0070702_100053277
327 Ga0068859_100002429
328 Ga0068859_100003411
329 Ga0068859_100007856
330 Ga0068859_100034155
331 Ga0068859_100042299
332 Ga0068859_100207759
333 Ga0068864_100003195
334 Ga0068864_100202704
335 Ga0068861_100012891
336 Ga0068861_100079699
337 Ga0068870_10005040
338 Ga0068863_100025758
339 Ga0068863_100122368
340 Ga0068863_100142848
341 Ga0068858_100004517
342 Ga0068858_100026400
343 Ga0068860_100173758
344 Ga0068862_100002348
345 Ga0081455_10099267
346 Ga0081539_10000056
347 Ga0081539_10000106
348 Ga0081539_10001461
349 Ga0070712_100036552
350 Ga0068871_100179098
351 Ga0075428_100016540
352 Ga0075428_100112734
353 Ga0075428_100114447
354 Ga0075430_100052036
355 Ga0075430_100076292
356 Ga0075431_100002428
357 Ga0075431_100013438
358 Ga0075433_10013377
359 Ga0075433_10046989
360 Ga0075434_100003140
361 Ga0075434_100026334
362 Ga0075429_100007725
363 Ga0097620_100002429
364 Ga0097620_100003411
365 Ga0097620_100007856
366 Ga0097620_100034154
367 Ga0097620_100042299
368 Ga0097620_100207766
369 Ga0075435_100025627
370 Ga0111539_10001329
371 Ga0111539_10005771
372 Ga0111539_10015695
373 Ga0111539_10025646
374 Ga0111539_10030261
375 Ga0111539_10077666
376 Ga0111539_10181750
377 Ga0111539_10259629
378 Ga0114129_10001646
379 Ga0114129_10007770
380 Ga0114129_10020210
381 Ga0114129_10027839
382 Ga0114129_10125855
383 Ga0114129_10252133
384 Ga0105243_10022881
385 Ga0105243_10090531
386 Ga0105242_10013562
387 Ga0105248_10004319
388 Ga0105248_10052579
389 Ga0105238_10010341
390 Ga0105249_10002594
391 Ga0157375_10014642
392 Ga0157375_10185671
393 Ga0163163_10009666
394 Ga0163163_10037487
395 Ga0163163_10095244
396 Ga0163163_10152913
397 Ga0157377_10033569
398 Ga0157379_10061138
399 Ga0207682_10005286
400 Ga0207682_10022519
401 Ga0207710_10023063
402 Ga0207645_10046072
403 Ga0207643_10011464
404 Ga0207707_10018962
405 Ga0207693_10104467
406 Ga0207660_10130328
407 Ga0207662_10019137
408 Ga0207646_10066765
409 Ga0207646_10074796
410 Ga0207681_10020687
411 Ga0207681_10022678
412 Ga0207681_10030407
413 Ga0207650_10014037
414 Ga0207650_10015727
415 Ga0207650_10090335
416 Ga0207659_10001311
417 Ga0207659_10002377
418 Ga0207659_10045993
419 Ga0207659_10051220
420 Ga0207659_10059649
421 Ga0207659_10067158
422 Ga0207644_10040836
423 Ga0207644_10068614
424 Ga0207706_10134513
425 Ga0207686_10058083
426 Ga0207709_10009263
427 Ga0207709_10055813
428 Ga0207670_10005578
429 Ga0207670_10013643
430 Ga0207670_10053712
431 Ga0207704_10028457
432 Ga0207691_10014956
433 Ga0207691_10018561
434 Ga0207691_10024282
435 Ga0207691_10072025
436 Ga0207691_10118807
437 Ga0207691_10217880
438 Ga0207711_10010614
439 Ga0207711_10053394
440 Ga0207689_10002031
441 Ga0207661_10044129
442 Ga0207679_10013700
443 Ga0207679_10088465
444 Ga0207651_10013644
445 Ga0207651_10016149
446 Ga0207651_10028452
447 Ga0207651_10050642
448 Ga0207651_10108447
449 Ga0207703_10006215
450 Ga0207703_10024256
451 Ga0207703_10107003
452 Ga0207678_10022650
453 Ga0207708_10003696
454 Ga0207708_10005890
455 Ga0207641_10021486
456 Ga0207641_10076868
457 Ga0207648_10000338
458 Ga0207648_10006068
459 Ga0207676_10026653
460 Ga0207676_10114080
461 Ga0207674_10065176
462 Ga0207675_100001689
463 Ga0207428_10002109
464 Ga0207428_10014511
465 Ga0207428_10041054
466 Ga0268264_10003629
467 Ga0307405_10000969
468 Ga0307416_100004059
469 Ga0307415_100001772
470 Ga0373937_0028011
471 Ga0451576_0017891
472 Ga0495603_0128327
473 Ga0495594_0016261
474 Ga0495598_0021264
475 Ga0495609_0016782
476 Ga0495621_0028642
477 Ga0495656_0009776
478 Ga0495659_0004925
479 Ga0495659_0009619
480 Ga0495588_0006791
481 Ga0495676_0063121
482 Ga0496108_0030095
483 Ga0496109_0089633
484 Ga0501031_0079087
485 Ga0501036_0042167
486 Ga0501036_0056065
487 Ga0501039_0016820
488 Ga0501040_0009718
489 Ga0501040_0043243
490 Ga0501041_0013990
491 Ga0501041_0023919
492 Ga0501042_0026014
493 Ga0501042_0087924
494 Ga0501046_0015074
495 Ga0501046_0045063
496 Ga0501072_0022501
497 Ga0501076_0035241
498 Ga0501080_0159303
499 Ga0501081_0007968
500 Ga0501081_0020931
501 Ga0501045_0008124
502 nmdc:mga05p37_24839_c1
503 nmdc:mga05p37_354937_c1
504 nmdc:mga05p37_4938_c1
505 nmdc:mga05p37_86099_c1
506 nmdc:mga09592_39042_c1
507 nmdc:mga0qj67_74218_c1
508 nmdc:mga06r32_82474_c1
509 nmdc:mga08y16_10781_c1
510 nmdc:mga08y16_1518_c1
511 nmdc:mga08y16_191664_c1
512 nmdc:mga08y16_266410_c1
513 nmdc:mga08y16_3650_c1
514 nmdc:mga0n895_154752_c1
515 nmdc:mga0a205_7220_c1
516 nmdc:mga0a205_9695_c2
517 Ga0501084_0010843
518 Ga0501084_0078544
519 Ga0590071_001405
520 Ga0590074_003496
521 Ga0590077_001648
522 Ga0530510_0011052

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18317

SDH_C

Shikimate 5'-dehydrogenase C-terminal domain

482

512

0.98

PF08501

Shikimate_dh_N

Shikimate dehydrogenase substrate binding domain

258

338

0.95

PF01487

DHquinase_I

Type I 3-dehydroquinase

46

242

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2hk8-assembly2.cif.gz_B crystal structure of shikimate dehydrogenase from aquifex aeolicus at 2.35 angstrom resolution 0.9207 211 459
2o7s-assembly1.cif.gz_A crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-shikimate-nadp(h) 0.9143 1 466
2o7q-assembly1.cif.gz_A crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-shikimate-nadp(h) 0.9129 1 466
1nvt-assembly1.cif.gz_B crystal structure of shikimate dehydrogenase (aroe or mj1084) in complex with nadp+ 0.9014 211 464
6bmb-assembly1.cif.gz_A crystal structure of arabidopsis dehydroquinate dehydratase-shikimate dehydrogenase (t381g mutant) in complex with tartrate and shikimate 0.897 1 466
ID Description Score Start End Superfamily
af_A0A1D6E3F3_39_301_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9473 327 357 3.50.50.60
af_Q4CQU6_365_588_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9458 327 360 3.50.50.60
af_P0A6D5_3_112_3.40.50.10860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 0.9276 211 313 3.40.50.10860
af_P0A6D5_8_104_1.10.560.10 Mainly Alpha;Orthogonal Bundle;GROEL; domain 1;GroEL-like equatorial domain 0.9221 216 305 1.10.560.10
af_P15770_4_98_2.40.10.10 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9157 219 304 2.40.10.10
ID Description Score Start End GO Terms
AF-A0A7C6E941-F1-model_v4 shikimate dehydrogenase (NADP(+)) (EC 1.1.1.25) 0.9436 206 465 GO:0004764
GO:0008652
GO:0009073
GO:0009423
GO:0019632
GO:0050661
AF-Q2LUD4-F1-model_v4 Shikimate dehydrogenase (NADP(+)) (SDH) (EC 1.1.1.25) 0.9355 216 465 GO:0004764
GO:0008652
GO:0009073
GO:0009423
GO:0019632
GO:0050661
AF-A0A496Z5K7-F1-model_v4 Shikimate dehydrogenase (NADP(+)) (SDH) (EC 1.1.1.25) 0.935 211 465 GO:0004106
GO:0004764
GO:0008652
GO:0009073
GO:0009423
GO:0019632
GO:0050661
AF-A0A257VJE0-F1-model_v4 Shikimate dehydrogenase (NADP(+)) (SDH) (EC 1.1.1.25) 0.9337 163 465 GO:0003855
GO:0004764
GO:0008652
GO:0009073
GO:0009423
GO:0019632
GO:0050661
AF-A0A382PZG7-F1-model_v4 shikimate dehydrogenase (NADP(+)) (EC 1.1.1.25) 0.9323 260 464 GO:0004764
GO:0008652
GO:0009073
GO:0009423
GO:0019632
GO:0050661

Map