F369980

General Info

Members Datasets Scaffolds Average Seq Length
260 208 229 358

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2966921586|2966923803
Length 407
Sequence TADTNFLTAISHLGVAPITFTKHDDSIAGASGAPQRPLQAGGCEDGGMSALHDPDVRGFASDNYSGVHDEVLAAIAAANGAHQTAYGEDVYTRQVQQAFRREFGEQAQTFPVFNGTGANVTGLQSMLPRWGAVVAAGTAHINADEGGAPEKVGGIKILTVTSPDGKLTPALVDEEAWGFGDEHRAQPLVVSITQSSELGTVYTPEEVRALADHAHARGMRLHMDGARIANAAASLGLPLRSFTTDAGVDVLSFGGTKNGILLGEAIVVLDPEASSGLTFLRKTNMQLSSKMRFVSAQLLALLGDGGAEDPLWLRSARHANAMASRLRSRLDESIGAGRISGLAFTQLTQANAVFATLPAGVADRLREAYRFYDWNPTTGEVRWVCSFDTKEDDVDAFAAAIERELGA

Samples

Sample ID Description Type Environment
1 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
2 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
3 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
4 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
5 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
6 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
7 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
8 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
9 2857479173 Micrococcus sp. R-74225 Isolate Unclassified
10 2857632687 Micrococcus sp. R-73081 Isolate Unclassified
11 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
12 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
13 2870804320 Micrococcus yunnanensis DSM 21948 Isolate Unclassified
14 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
15 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
16 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
17 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
18 2920879853 Kocuria salina CV6 Isolate Unclassified
19 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
20 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
21 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
22 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
23 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
24 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
25 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
26 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
27 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
28 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
29 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
30 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
31 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
32 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
33 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
34 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
35 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
36 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
37 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
38 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
39 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
40 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
41 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
44 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
45 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
46 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
77 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
78 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
79 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
80 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
81 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
82 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
83 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
86 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
87 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
88 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
89 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
92 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
93 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
94 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
95 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
96 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
97 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
98 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
99 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
100 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
101 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
102 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
103 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
104 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
105 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
106 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
107 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
108 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
109 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
110 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
111 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
112 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
113 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
114 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
115 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
116 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
117 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
118 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
119 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
120 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
124 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
125 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
126 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
127 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
128 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
129 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
130 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
131 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
132 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
133 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
134 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
135 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
136 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
137 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
138 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
139 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
140 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
143 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
144 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
145 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
146 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
147 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
148 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
149 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
150 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
151 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
152 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
153 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
154 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
155 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
156 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
157 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
158 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
159 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
162 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
163 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
164 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
165 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
166 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
167 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
168 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
169 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
170 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
171 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
172 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
185 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
186 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
187 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
188 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
189 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
191 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
192 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
193 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
194 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
195 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
196 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
197 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
198 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
199 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
200 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
201 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
202 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
203 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
204 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
205 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
206 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
207 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
208 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.69
Metatranscriptomes 0.38
Isolates 11.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.85
Nodule 0
Rhizoplane 8.85
Rhizosphere 75.77
Stem 0
Stem Tuber 0
Unclassified 11.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10026394 3300002067 Bacteria 1746
2 rootH2_10027486 3300003320 Bacteria 4663
3 rootL2_10038509 3300003322 Bacteria 6881
4 Ga0032354_1070702 3300003693 Bacteria 1339
5 Ga0065712_10137242 3300005290 Bacteria 1485
6 Ga0070658_10079181 3300005327 Bacteria 2698
7 Ga0070658_10121524 3300005327 Bacteria 2170
8 Ga0070670_100035201 3300005331 Bacteria 4311
9 Ga0070666_10031096 3300005335 Bacteria 3523
10 Ga0070682_100019003 3300005337 Bacteria 4025
11 Ga0070668_100114228 3300005347 Bacteria 2151
12 Ga0070675_100079408 3300005354 Bacteria 2734
13 Ga0070673_100066339 3300005364 Bacteria 2882
14 Ga0070663_100008849 3300005455 Bacteria 6213
15 Ga0070681_10028232 3300005458 Bacteria 5641
16 Ga0070684_100135247 3300005535 Bacteria 2226
17 Ga0068852_100117168 3300005616 Bacteria 2432
18 Ga0075363_100143010 3300006048 Bacteria 1348
19 Ga0075364_10000904 3300006051 Bacteria 15667
20 Ga0075432_10004011 3300006058 Bacteria 5027
21 Ga0075432_10009058 3300006058 Bacteria 3391
22 Ga0105244_10041277 3300009036 Bacteria 2391
23 Ga0105245_10263970 3300009098 Bacteria 1677
24 Ga0105243_10045941 3300009148 Bacteria 3433
25 Ga0105237_10003454 3300009545 Bacteria 18762
26 Ga0157371_10056786 3300013102 Bacteria 2776
27 Ga0157370_10012129 3300013104 Bacteria 8964
28 Ga0157369_10099836 3300013105 Bacteria 3094
29 Ga0157375_10228660 3300013308 Bacteria 2019
30 Ga0163161_10136701 3300017792 Bacteria 1853
31 Ga0207697_10028754 3300025315 Bacteria 2274
32 Ga0207655_1044829 3300025728 Bacteria 1854
33 Ga0207682_10012442 3300025893 Bacteria 3321
34 Ga0207680_10009719 3300025903 Bacteria 4784
35 Ga0207645_10046809 3300025907 Bacteria 2762
36 Ga0207705_10080645 3300025909 Bacteria 2371
37 Ga0207707_10038838 3300025912 Bacteria 4161
38 Ga0207671_10103435 3300025914 Bacteria 2160
39 Ga0207681_10288005 3300025923 Bacteria 1295
40 Ga0207659_10168461 3300025926 Bacteria 1726
41 Ga0207687_10159348 3300025927 Bacteria 1730
42 Ga0207691_10002635 3300025940 Bacteria 17520
43 Ga0207668_10083449 3300025972 Bacteria 2325
44 Ga0207639_10078864 3300026041 Bacteria 2601
45 Ga0207678_10005993 3300026067 Bacteria 10815
46 Ga0207683_10011100 3300026121 Bacteria 7677
47 Ga0207698_10066421 3300026142 Bacteria 2839
48 Ga0207428_10011778 3300027907 Bacteria 7712
49 Ga0268266_10141177 3300028379 Bacteria 2162
50 Ga0265327_10031098 3300031251 Bacteria 3006
51 Ga0307408_100006977 3300031548 Bacteria 7473
52 Ga0307408_100029051 3300031548 Bacteria 3827
53 Ga0307408_100033001 3300031548 Bacteria 3613
54 Ga0316575_10001633 3300031665 Bacteria 7323
55 Ga0316576_10001016 3300031727 Bacteria 14487
56 Ga0307405_10001471 3300031731 Bacteria 9931
57 Ga0307405_10057429 3300031731 Bacteria 2445
58 Ga0307405_10096962 3300031731 Bacteria 1967
59 Ga0307413_10068067 3300031824 Bacteria 2229
60 Ga0307413_10128687 3300031824 Bacteria 1729
61 Ga0307410_10017887 3300031852 Bacteria 4268
62 Ga0307410_10061484 3300031852 Bacteria 2570
63 Ga0307410_10130244 3300031852 Bacteria 1847
64 Ga0307407_10104228 3300031903 Bacteria 1767
65 Ga0307412_10004310 3300031911 Bacteria 7930
66 Ga0307412_10127744 3300031911 Bacteria 1841
67 Ga0307412_10219707 3300031911 Bacteria 1456
68 Ga0307409_100008208 3300031995 Bacteria 6317
69 Ga0307414_10043716 3300032004 Bacteria 3054
70 Ga0307415_100058100 3300032126 Bacteria 2662
71 Ga0307415_100356800 3300032126 Bacteria 1233
72 Ga0373935_0058382 3300035692 Bacteria 2465
73 Ga0316584_0002249 3300036712 Bacteria 12123
74 Ga0395899_0007613 3300037312 Bacteria 8353
75 Ga0395899_0029321 3300037312 Bacteria 4139
76 Ga0395900_0013225 3300037418 Bacteria 8436
77 Ga0395898_0036600 3300037466 Bacteria 4873
78 Ga0395898_0108670 3300037466 Bacteria 2659
79 Ga0439436_0016660 3300041404 Bacteria 2203
80 Ga0439438_028938 3300041405 Bacteria 1486
81 Ga0439439_0002329 3300041406 Bacteria 4017
82 Ga0439461_0001227 3300041410 Bacteria 3910
83 Ga0439465_0006033 3300041413 Bacteria 3852
84 Ga0439431_0000972 3300041997 Bacteria 6218
85 Ga0439433_0004158 3300041999 Bacteria 3110
86 Ga0439442_000025 3300042002 Bacteria 38070
87 Ga0439442_000154 3300042002 Bacteria 17197
88 Ga0439442_001814 3300042002 Bacteria 4179
89 Ga0439442_002093 3300042002 Bacteria 3924
90 Ga0439432_045035 3300042006 Bacteria 1389
91 Ga0439449_0009874 3300042007 Bacteria 3609
92 Ga0450920_000022 3300042122 Bacteria 17808
93 Ga0450907_000440 3300042146 Bacteria 12179
94 Ga0439434_0000150 3300042435 Bacteria 18663
95 Ga0450918_000322 3300042531 Bacteria 10805
96 Ga0466969_0114084 3300044656 Bacteria 1262
97 Ga0466961_0014088 3300044693 Bacteria 5129
98 Ga0466971_0003467 3300044719 Bacteria 6736
99 Ga0466960_0085388 3300044901 Bacteria 1599
100 Ga0466958_0117943 3300045836 Bacteria 1660
101 Ga0466967_0012436 3300045976 Bacteria 6510
102 Ga0495603_0036818 3300046455 Bacteria 2937
103 Ga0495590_0000115 3300046457 Bacteria 48176
104 Ga0495629_0009265 3300046459 Bacteria 7202
105 Ga0495641_0068057 3300046461 Bacteria 1601
106 Ga0495651_0002186 3300046462 Bacteria 15104
107 Ga0495651_0043931 3300046462 Bacteria 3464
108 Ga0495651_0188902 3300046462 Bacteria 1451
109 Ga0495580_0128984 3300046472 Bacteria 1754
110 Ga0495662_0129873 3300046476 Bacteria 1238
111 Ga0495594_0023553 3300046499 Bacteria 3301
112 Ga0495608_0002902 3300046511 Bacteria 12277
113 Ga0495628_0020705 3300046516 Bacteria 5421
114 Ga0495643_0028731 3300046522 Bacteria 3115
115 Ga0495648_0007660 3300046524 Bacteria 8609
116 Ga0495666_0050385 3300046526 Bacteria 2001
117 Ga0495652_0001102 3300046529 Bacteria 30575
118 Ga0495654_0071879 3300046530 Bacteria 1639
119 Ga0495665_0007313 3300046531 Bacteria 5965
120 Ga0495640_0024824 3300046533 Bacteria 4354
121 Ga0495645_0081296 3300046543 Bacteria 2324
122 Ga0495667_0003146 3300046559 Bacteria 11076
123 Ga0495668_0014719 3300046616 Bacteria 4581
124 Ga0495668_0040767 3300046616 Bacteria 2589
125 Ga0495634_0031540 3300046642 Bacteria 3649
126 Ga0495635_0058002 3300046663 Bacteria 2663
127 Ga0495588_0057536 3300046674 Bacteria 2008
128 Ga0495623_0080655 3300046679 Bacteria 2013
129 Ga0495613_0001849 3300046689 Bacteria 16106
130 Ga0495670_0010446 3300046691 Bacteria 4561
131 Ga0495600_0023308 3300046809 Bacteria 3981
132 Ga0495600_0128614 3300046809 Bacteria 1646
133 Ga0495581_0006436 3300047315 Bacteria 6815
134 Ga0495581_0013896 3300047315 Bacteria 4668
135 Ga0495581_0051893 3300047315 Bacteria 2369
136 Ga0495604_0022536 3300047317 Bacteria 5028
137 Ga0495604_0027983 3300047317 Bacteria 4483
138 Ga0495604_0052514 3300047317 Bacteria 3156
139 Ga0495636_0010424 3300047318 Bacteria 3670
140 Ga0495636_0136730 3300047318 Bacteria 1092
141 Ga0495674_0065992 3300047319 Bacteria 3142
142 Ga0495672_0001622 3300047320 Bacteria 21910
143 Ga0495687_072205 3300047443 Bacteria 1380
144 Ga0495675_0011980 3300047444 Bacteria 5450
145 Ga0495675_0045094 3300047444 Bacteria 2807
146 Ga0495673_0001511 3300047469 Bacteria 18339
147 Ga0495684_0049988 3300047471 Bacteria 3193
148 Ga0495686_0010388 3300047472 Bacteria 6626
149 Ga0495593_0058417 3300047673 Bacteria 2023
150 Ga0495602_0064222 3300048088 Bacteria 3175
151 Ga0496100_0004246 3300048903 Bacteria 7572
152 Ga0496101_0000094 3300048904 Bacteria 95577
153 Ga0496101_0217651 3300048904 Bacteria 1481
154 Ga0496102_0000014 3300048905 Bacteria 310241
155 Ga0496102_0058340 3300048905 Bacteria 3526
156 Ga0496103_0000004 3300048906 Bacteria 510080
157 Ga0496104_0396066 3300048907 Bacteria 1293
158 Ga0496106_0129228 3300048909 Bacteria 1980
159 Ga0496107_0172291 3300048910 Bacteria 1606
160 Ga0496108_0012096 3300048911 Bacteria 7016
161 Ga0496108_0117244 3300048911 Bacteria 2281
162 Ga0496109_0020252 3300048912 Bacteria 5875
163 Ga0496109_0020781 3300048912 Bacteria 5799
164 Ga0496109_0219334 3300048912 Bacteria 1789
165 Ga0496110_0055784 3300048913 Bacteria 3477
166 Ga0496112_0031172 3300048915 Bacteria 5168
167 Ga0496112_0046138 3300048915 Bacteria 4273
168 Ga0496113_0046984 3300048916 Bacteria 3207
169 Ga0496113_0061276 3300048916 Bacteria 2839
170 Ga0496113_0226771 3300048916 Bacteria 1489
171 Ga0496114_0327274 3300048917 Bacteria 1354
172 Ga0496115_0031231 3300048918 Bacteria 4195
173 Ga0496115_0133285 3300048918 Bacteria 2048
174 Ga0496116_0000069 3300048919 Bacteria 252643
175 Ga0496117_0000003 3300048920 Bacteria 1881097
176 Ga0496118_0000001 3300048921 Bacteria 1881100
177 Ga0496119_0001073 3300048922 Bacteria 34598
178 Ga0496119_0044880 3300048922 Bacteria 2777
179 Ga0496120_0001262 3300048923 Bacteria 31801
180 Ga0496121_0000024 3300048924 Bacteria 462959
181 Ga0496121_0000032 3300048924 Bacteria 378997
182 Ga0496124_0024160 3300048927 Bacteria 5532
183 Ga0496126_0000067 3300048929 Bacteria 249091
184 Ga0501031_0087613 3300049568 Bacteria 2030
185 Ga0501032_0047149 3300049569 Bacteria 2911
186 Ga0501033_0034652 3300049570 Bacteria 3785
187 Ga0501033_0131807 3300049570 Bacteria 1810
188 Ga0501034_0075136 3300049571 Bacteria 3387
189 Ga0501034_0174582 3300049571 Bacteria 2115
190 Ga0501036_0134667 3300049572 Bacteria 2085
191 Ga0501037_0038849 3300049573 Bacteria 3505
192 Ga0501037_0076567 3300049573 Bacteria 2428
193 Ga0501037_0101800 3300049573 Bacteria 2072
194 Ga0501038_0024981 3300049574 Bacteria 5327
195 Ga0501038_0085907 3300049574 Bacteria 2644
196 Ga0501039_0111210 3300049575 Bacteria 2141
197 Ga0501039_0344106 3300049575 Bacteria 1172
198 Ga0501042_0012613 3300049578 Bacteria 5732
199 Ga0501043_0014250 3300049579 Bacteria 6221
200 Ga0501043_0030683 3300049579 Bacteria 4226
201 Ga0501043_0123039 3300049579 Bacteria 2034
202 Ga0501043_0153957 3300049579 Bacteria 1798
203 Ga0501046_0039285 3300049580 Bacteria 3791
204 Ga0501047_0072828 3300049581 Bacteria 3307
205 Ga0501047_0145162 3300049581 Bacteria 2250
206 Ga0501070_0277522 3300049586 Bacteria 1368
207 Ga0501073_0060652 3300049589 Bacteria 2640
208 Ga0501079_0027242 3300049741 Bacteria 4381
209 Ga0501080_0175996 3300049742 Bacteria 1971
210 Ga0501083_0028323 3300049744 Bacteria 3861
211 Ga0501035_0007415 3300049822 Bacteria 10243
212 Ga0501035_0052741 3300049822 Bacteria 3638
213 Ga0501044_0015315 3300049823 Bacteria 8259
214 Ga0501044_0063719 3300049823 Bacteria 3764
215 Ga0501044_0195418 3300049823 Bacteria 1983
216 Ga0501045_0052701 3300049824 Bacteria 2971
217 Ga0501045_0113959 3300049824 Bacteria 2005
218 nmdc:mga03n38_16292_c1 3300050490 Bacteria 2889
219 nmdc:mga00v17_3920_c1 3300050491 Bacteria 7675
220 nmdc:mga0yw44_182296_c1 3300050492 Bacteria 1382
221 Ga0495601_0170425 3300053077 Bacteria 1423
222 Ga0500643_002530 3300053087 Bacteria 9358
223 Ga0500618_005649 3300053125 Bacteria 3772
224 Ga0500652_000287 3300053131 Bacteria 18511
225 Ga0500616_0005078 3300053153 Bacteria 9084
226 Ga0500645_003904 3300053730 Bacteria 5890
227 Ga0501084_0016318 3300054114 Bacteria 6167
228 Ga0466962_0003204 3300061719 Bacteria 7772
229 Ga0530510_0009081 3300061734 Bacteria 6968

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049575 Ga0501039_0344106 Ga0501039_0344106_181_1110 290
2 3300049742 Ga0501080_0175996 Ga0501080_0175996_56_985 290
3 3300032126 Ga0307415_100058100 Ga0307415_1000581002 321
4 3300048907 Ga0496104_0396066 Ga0496104_0396066_41_1042 321
5 3300048924 Ga0496121_0000024 Ga0496121_0000024_447758_448759 321
6 3300053125 Ga0500618_005649 Ga0500618_005649_2752_3753 321
7 3300031251 Ga0265327_10031098 Ga0265327_100310982 330
8 3300049586 Ga0501070_0277522 Ga0501070_0277522_93_1121 330
9 3300047318 Ga0495636_0136730 Ga0495636_0136730_78_1079 331
10 3300049822 Ga0501035_0052741 Ga0501035_0052741_11_1024 331
11 3300049578 Ga0501042_0012613 Ga0501042_0012613_1465_2520 332
12 3300049580 Ga0501046_0039285 Ga0501046_0039285_163_1218 332
13 3300049741 Ga0501079_0027242 Ga0501079_0027242_56_1111 332
14 3300049824 Ga0501045_0052701 Ga0501045_0052701_612_1667 332
15 3300054114 Ga0501084_0016318 Ga0501084_0016318_3666_4721 332
16 3300061734 Ga0530510_0009081 Ga0530510_0009081_662_1717 332
17 3300005458 Ga0070681_10028232 Ga0070681_100282323 334
18 3300025912 Ga0207707_10038838 Ga0207707_100388382 334
19 3300053131 Ga0500652_000287 Ga0500652_000287_12005_13057 340
20 iso_pu_bacteria 2842888712 2842892736 340
21 3300013308 Ga0157375_10228660 Ga0157375_102286602 341
22 3300036712 Ga0316584_0002249 Ga0316584_0002249_1811_2836 341
23 3300044693 Ga0466961_0014088 Ga0466961_0014088_3483_4511 342
24 3300044719 Ga0466971_0003467 Ga0466971_0003467_5407_6435 342
25 3300045976 Ga0466967_0012436 Ga0466967_0012436_2521_3570 342
26 3300061719 Ga0466962_0003204 Ga0466962_0003204_5899_6927 342
27 3300048912 Ga0496109_0020781 Ga0496109_0020781_4135_5211 344
28 3300048913 Ga0496110_0055784 Ga0496110_0055784_596_1672 344
29 3300048918 Ga0496115_0133285 Ga0496115_0133285_832_1908 344
30 iso_pu_bacteria 8004182704 8004184463 345
31 3300050492 nmdc:mga0yw44_182296_c1 nmdc:mga0yw44_182296_c1_155_1201 346
32 iso_pu_bacteria 2857479173 2857480692 346
33 iso_pu_bacteria 2857632687 2857633435 346
34 iso_pu_bacteria 2870801768 2870803721 346
35 iso_pu_bacteria 2870804320 2870805672 346
36 iso_pu_bacteria 2920879853 2920880544 346
37 3300009098 Ga0105245_10263970 Ga0105245_102639702 347
38 3300031548 Ga0307408_100033001 Ga0307408_1000330013 347
39 3300031731 Ga0307405_10057429 Ga0307405_100574293 347
40 3300031911 Ga0307412_10219707 Ga0307412_102197072 347
41 3300048904 Ga0496101_0217651 Ga0496101_0217651_236_1297 347
42 3300048911 Ga0496108_0012096 Ga0496108_0012096_4845_5906 347
43 3300048912 Ga0496109_0020252 Ga0496109_0020252_1445_2506 347
44 3300048915 Ga0496112_0031172 Ga0496112_0031172_2984_4045 347
45 3300048916 Ga0496113_0061276 Ga0496113_0061276_828_1889 347
46 3300050490 nmdc:mga03n38_16292_c1 nmdc:mga03n38_16292_c1_999_2060 347
47 iso_pu_bacteria 2767802112 2768643941 347
48 iso_pu_bacteria 2818991472 2819743900 347
49 iso_pu_bacteria 2946024296 2946025843 347
50 iso_pu_bacteria 8046352972 8046354413 347
51 3300006048 Ga0075363_100143010 Ga0075363_1001430102 348
52 3300006051 Ga0075364_10000904 Ga0075364_100009042 348
53 3300041410 Ga0439461_0001227 Ga0439461_0001227_1146_2249 348
54 3300041997 Ga0439431_0000972 Ga0439431_0000972_4574_5677 348
55 3300049570 Ga0501033_0131807 Ga0501033_0131807_278_1345 348
56 3300049822 Ga0501035_0007415 Ga0501035_0007415_5721_6788 348
57 3300049823 Ga0501044_0015315 Ga0501044_0015315_5700_6767 348
58 3300050491 nmdc:mga00v17_3920_c1 nmdc:mga00v17_3920_c1_1257_2375 348
59 iso_pu_bacteria 2643221715 2644639863 348
60 iso_pu_bacteria 2902810491 2902811003 348
61 3300006058 Ga0075432_10004011 Ga0075432_100040116 349
62 3300035692 Ga0373935_0058382 Ga0373935_0058382_314_1441 349
63 3300046455 Ga0495603_0036818 Ga0495603_0036818_824_1891 349
64 3300046457 Ga0495590_0000115 Ga0495590_0000115_36176_37243 349
65 3300046459 Ga0495629_0009265 Ga0495629_0009265_3275_4342 349
66 3300046461 Ga0495641_0068057 Ga0495641_0068057_307_1374 349
67 3300047319 Ga0495674_0065992 Ga0495674_0065992_1797_2864 349
68 3300047673 Ga0495593_0058417 Ga0495593_0058417_886_1953 349
69 3300048912 Ga0496109_0219334 Ga0496109_0219334_77_1144 349
70 3300048915 Ga0496112_0046138 Ga0496112_0046138_3011_4078 349
71 3300048918 Ga0496115_0031231 Ga0496115_0031231_255_1304 349
72 3300049579 Ga0501043_0123039 Ga0501043_0123039_667_1743 349
73 3300049581 Ga0501047_0072828 Ga0501047_0072828_1850_2926 349
74 3300049589 Ga0501073_0060652 Ga0501073_0060652_499_1575 349
75 3300049744 Ga0501083_0028323 Ga0501083_0028323_35_1111 349
76 3300053153 Ga0500616_0005078 Ga0500616_0005078_6361_7416 349
77 3300003322 rootL2_10038509 rootL2_100385095 350
78 3300005327 Ga0070658_10079181 Ga0070658_100791812 350
79 3300005337 Ga0070682_100019003 Ga0070682_1000190032 350
80 3300005455 Ga0070663_100008849 Ga0070663_1000088496 350
81 3300005535 Ga0070684_100135247 Ga0070684_1001352472 350
82 3300005616 Ga0068852_100117168 Ga0068852_1001171682 350
83 3300025909 Ga0207705_10080645 Ga0207705_100806453 350
84 3300025927 Ga0207687_10159348 Ga0207687_101593482 350
85 3300026067 Ga0207678_10005993 Ga0207678_1000599311 350
86 3300026142 Ga0207698_10066421 Ga0207698_100664212 350
87 3300031665 Ga0316575_10001633 Ga0316575_100016332 350
88 3300031727 Ga0316576_10001016 Ga0316576_100010162 350
89 3300031852 Ga0307410_10130244 Ga0307410_101302441 350
90 3300045836 Ga0466958_0117943 Ga0466958_0117943_119_1174 350
91 3300046462 Ga0495651_0002186 Ga0495651_0002186_13539_14594 350
92 3300046516 Ga0495628_0020705 Ga0495628_0020705_2501_3556 350
93 3300046529 Ga0495652_0001102 Ga0495652_0001102_6382_7437 350
94 3300046809 Ga0495600_0128614 Ga0495600_0128614_483_1538 350
95 3300047317 Ga0495604_0052514 Ga0495604_0052514_1867_2922 350
96 3300048905 Ga0496102_0058340 Ga0496102_0058340_1951_3051 350
97 3300053077 Ga0495601_0170425 Ga0495601_0170425_21_1076 350
98 3300053730 Ga0500645_003904 Ga0500645_003904_2025_3089 350
99 3300005327 Ga0070658_10121524 Ga0070658_101215242 351
100 3300032126 Ga0307415_100356800 Ga0307415_1003568002 351
101 3300044656 Ga0466969_0114084 Ga0466969_0114084_32_1105 351
102 3300046462 Ga0495651_0188902 Ga0495651_0188902_252_1319 351
103 3300047443 Ga0495687_072205 Ga0495687_072205_98_1162 351
104 3300049568 Ga0501031_0087613 Ga0501031_0087613_368_1498 351
105 3300049570 Ga0501033_0034652 Ga0501033_0034652_257_1417 351
106 3300049571 Ga0501034_0075136 Ga0501034_0075136_2013_3143 351
107 3300049573 Ga0501037_0101800 Ga0501037_0101800_217_1377 351
108 3300049575 Ga0501039_0111210 Ga0501039_0111210_898_2028 351
109 3300049579 Ga0501043_0153957 Ga0501043_0153957_245_1375 351
110 3300049581 Ga0501047_0145162 Ga0501047_0145162_1022_2152 351
111 3300049823 Ga0501044_0063719 Ga0501044_0063719_1483_2613 351
112 3300049824 Ga0501045_0113959 Ga0501045_0113959_716_1858 351
113 iso_pu_bacteria 2643221631 2644178768 351
114 iso_pu_bacteria 2690315906 2691513650 351
115 iso_pu_bacteria 2808606366 2808879593 351
116 iso_pu_bacteria 2808606371 2808896118 351
117 iso_pu_bacteria 2857740372 2857742650 352
118 iso_pu_bacteria 8004021418 8004024506 353
119 iso_pu_bacteria 8004025490 8004026002 353
120 3300047317 Ga0495604_0027983 Ga0495604_0027983_385_1464 354
121 3300047444 Ga0495675_0045094 Ga0495675_0045094_1037_2116 354
122 iso_pu_bacteria 2902792274 2902798248 354
123 3300003320 rootH2_10027486 rootH2_100274863 355
124 3300003693 Ga0032354_1070702 Ga0032354_10707021 355
125 3300013105 Ga0157369_10099836 Ga0157369_100998363 355
126 3300028379 Ga0268266_10141177 Ga0268266_101411772 355
127 3300031548 Ga0307408_100006977 Ga0307408_1000069774 355
128 3300031731 Ga0307405_10001471 Ga0307405_100014714 355
129 3300031824 Ga0307413_10128687 Ga0307413_101286872 355
130 3300031903 Ga0307407_10104228 Ga0307407_101042282 355
131 3300031911 Ga0307412_10004310 Ga0307412_100043103 355
132 3300037312 Ga0395899_0007613 Ga0395899_0007613_5052_6149 355
133 3300037418 Ga0395900_0013225 Ga0395900_0013225_2272_3369 355
134 3300048916 Ga0496113_0046984 Ga0496113_0046984_1401_2498 355
135 3300049571 Ga0501034_0174582 Ga0501034_0174582_897_1994 355
136 3300049572 Ga0501036_0134667 Ga0501036_0134667_762_1859 355
137 3300049573 Ga0501037_0038849 Ga0501037_0038849_1058_2143 355
138 3300049573 Ga0501037_0076567 Ga0501037_0076567_443_1540 355
139 3300049574 Ga0501038_0024981 Ga0501038_0024981_1835_2932 355
140 3300049579 Ga0501043_0030683 Ga0501043_0030683_137_1234 355
141 3300049823 Ga0501044_0195418 Ga0501044_0195418_242_1339 355
142 iso_pu_bacteria 2919051321 2919051557 355
143 iso_pu_bacteria 2945920336 2945920478 355
144 iso_pu_bacteria 2974302888 2974303049 355
145 3300013102 Ga0157371_10056786 Ga0157371_100567862 356
146 3300013104 Ga0157370_10012129 Ga0157370_100121299 356
147 3300031852 Ga0307410_10061484 Ga0307410_100614843 356
148 3300042002 Ga0439442_000154 Ga0439442_000154_2535_3635 356
149 3300042122 Ga0450920_000022 Ga0450920_000022_2874_3974 356
150 3300042146 Ga0450907_000440 Ga0450907_000440_3075_4175 356
151 3300042435 Ga0439434_0000150 Ga0439434_0000150_14680_15780 356
152 3300042531 Ga0450918_000322 Ga0450918_000322_5206_6306 356
153 3300044901 Ga0466960_0085388 Ga0466960_0085388_208_1308 356
154 3300046462 Ga0495651_0043931 Ga0495651_0043931_1663_2745 356
155 3300046472 Ga0495580_0128984 Ga0495580_0128984_611_1693 356
156 3300046476 Ga0495662_0129873 Ga0495662_0129873_63_1145 356
157 3300046511 Ga0495608_0002902 Ga0495608_0002902_10240_11322 356
158 3300046526 Ga0495666_0050385 Ga0495666_0050385_94_1176 356
159 3300046531 Ga0495665_0007313 Ga0495665_0007313_4748_5830 356
160 3300046533 Ga0495640_0024824 Ga0495640_0024824_965_2047 356
161 3300046543 Ga0495645_0081296 Ga0495645_0081296_908_1990 356
162 3300046559 Ga0495667_0003146 Ga0495667_0003146_8993_10075 356
163 3300046642 Ga0495634_0031540 Ga0495634_0031540_1684_2766 356
164 3300046663 Ga0495635_0058002 Ga0495635_0058002_538_1620 356
165 3300046679 Ga0495623_0080655 Ga0495623_0080655_916_1998 356
166 3300046689 Ga0495613_0001849 Ga0495613_0001849_14020_15102 356
167 3300046809 Ga0495600_0023308 Ga0495600_0023308_2180_3262 356
168 3300047315 Ga0495581_0051893 Ga0495581_0051893_839_1921 356
169 3300047317 Ga0495604_0022536 Ga0495604_0022536_3096_4178 356
170 3300047444 Ga0495675_0011980 Ga0495675_0011980_866_1948 356
171 3300047471 Ga0495684_0049988 Ga0495684_0049988_917_1999 356
172 3300048088 Ga0495602_0064222 Ga0495602_0064222_1556_2638 356
173 iso_pu_bacteria 2966921586 2966923803 356
174 iso_pu_bacteria 2995463766 2995470927 356
175 3300005290 Ga0065712_10137242 Ga0065712_101372422 357
176 3300005331 Ga0070670_100035201 Ga0070670_1000352013 357
177 3300005335 Ga0070666_10031096 Ga0070666_100310962 357
178 3300005347 Ga0070668_100114228 Ga0070668_1001142282 357
179 3300005354 Ga0070675_100079408 Ga0070675_1000794083 357
180 3300005364 Ga0070673_100066339 Ga0070673_1000663393 357
181 3300006058 Ga0075432_10009058 Ga0075432_100090583 357
182 3300009036 Ga0105244_10041277 Ga0105244_100412772 357
183 3300009148 Ga0105243_10045941 Ga0105243_100459412 357
184 3300017792 Ga0163161_10136701 Ga0163161_101367012 357
185 3300025315 Ga0207697_10028754 Ga0207697_100287541 357
186 3300025728 Ga0207655_1044829 Ga0207655_10448291 357
187 3300025893 Ga0207682_10012442 Ga0207682_100124423 357
188 3300025903 Ga0207680_10009719 Ga0207680_100097192 357
189 3300025907 Ga0207645_10046809 Ga0207645_100468093 357
190 3300025923 Ga0207681_10288005 Ga0207681_102880051 357
191 3300025926 Ga0207659_10168461 Ga0207659_101684611 357
192 3300025940 Ga0207691_10002635 Ga0207691_100026356 357
193 3300025972 Ga0207668_10083449 Ga0207668_100834491 357
194 3300026041 Ga0207639_10078864 Ga0207639_100788642 357
195 3300026121 Ga0207683_10011100 Ga0207683_100111004 357
196 3300027907 Ga0207428_10011778 Ga0207428_100117784 357
197 3300031548 Ga0307408_100029051 Ga0307408_1000290512 357
198 3300031731 Ga0307405_10096962 Ga0307405_100969622 357
199 3300031824 Ga0307413_10068067 Ga0307413_100680671 357
200 3300031852 Ga0307410_10017887 Ga0307410_100178873 357
201 3300031911 Ga0307412_10127744 Ga0307412_101277441 357
202 3300031995 Ga0307409_100008208 Ga0307409_1000082085 357
203 3300032004 Ga0307414_10043716 Ga0307414_100437163 357
204 3300037312 Ga0395899_0029321 Ga0395899_0029321_314_1426 357
205 3300037466 Ga0395898_0036600 Ga0395898_0036600_1036_2172 357
206 3300037466 Ga0395898_0108670 Ga0395898_0108670_1094_2206 357
207 3300041404 Ga0439436_0016660 Ga0439436_0016660_529_1617 357
208 3300041405 Ga0439438_028938 Ga0439438_028938_136_1272 357
209 3300041406 Ga0439439_0002329 Ga0439439_0002329_1529_2617 357
210 3300041413 Ga0439465_0006033 Ga0439465_0006033_1612_2700 357
211 3300041999 Ga0439433_0004158 Ga0439433_0004158_1396_2484 357
212 3300042002 Ga0439442_000025 Ga0439442_000025_32048_33166 357
213 3300042002 Ga0439442_001814 Ga0439442_001814_1582_2670 357
214 3300042002 Ga0439442_002093 Ga0439442_002093_1750_2838 357
215 3300042006 Ga0439432_045035 Ga0439432_045035_170_1258 357
216 3300042007 Ga0439449_0009874 Ga0439449_0009874_1372_2460 357
217 3300046499 Ga0495594_0023553 Ga0495594_0023553_416_1504 357
218 3300046522 Ga0495643_0028731 Ga0495643_0028731_2008_3096 357
219 3300046524 Ga0495648_0007660 Ga0495648_0007660_260_1333 357
220 3300046530 Ga0495654_0071879 Ga0495654_0071879_154_1227 357
221 3300046616 Ga0495668_0014719 Ga0495668_0014719_3393_4466 357
222 3300046616 Ga0495668_0040767 Ga0495668_0040767_164_1252 357
223 3300046674 Ga0495588_0057536 Ga0495588_0057536_613_1701 357
224 3300046691 Ga0495670_0010446 Ga0495670_0010446_1770_2858 357
225 3300047315 Ga0495581_0006436 Ga0495581_0006436_4837_5940 357
226 3300047315 Ga0495581_0013896 Ga0495581_0013896_986_2074 357
227 3300047318 Ga0495636_0010424 Ga0495636_0010424_1918_3006 357
228 3300047320 Ga0495672_0001622 Ga0495672_0001622_11492_12565 357
229 3300047469 Ga0495673_0001511 Ga0495673_0001511_1080_2153 357
230 3300047472 Ga0495686_0010388 Ga0495686_0010388_3484_4593 357
231 3300048911 Ga0496108_0117244 Ga0496108_0117244_826_1914 357
232 3300048916 Ga0496113_0226771 Ga0496113_0226771_243_1331 357
233 3300048917 Ga0496114_0327274 Ga0496114_0327274_243_1331 357
234 3300048927 Ga0496124_0024160 Ga0496124_0024160_3764_4852 357
235 3300049569 Ga0501032_0047149 Ga0501032_0047149_546_1652 357
236 3300049574 Ga0501038_0085907 Ga0501038_0085907_47_1177 357
237 3300049579 Ga0501043_0014250 Ga0501043_0014250_2375_3481 357
238 iso_pu_bacteria 2919391150 2919393263 357
239 iso_pu_bacteria 2939598168 2939600216 357
240 iso_pu_bacteria 2945941187 2945943578 357
241 iso_pu_bacteria 2945956166 2945958241 357
242 iso_pu_bacteria 8054107350 8054111808 357
243 3300002067 JGI24735J21928_10026394 JGI24735J21928_100263942 358
244 3300009545 Ga0105237_10003454 Ga0105237_100034542 358
245 3300025914 Ga0207671_10103435 Ga0207671_101034352 358
246 3300048903 Ga0496100_0004246 Ga0496100_0004246_4668_5744 358
247 3300048904 Ga0496101_0000094 Ga0496101_0000094_61282_62358 358
248 3300048905 Ga0496102_0000014 Ga0496102_0000014_178073_179149 358
249 3300048906 Ga0496103_0000004 Ga0496103_0000004_178579_179655 358
250 3300048909 Ga0496106_0129228 Ga0496106_0129228_230_1306 358
251 3300048910 Ga0496107_0172291 Ga0496107_0172291_119_1195 358
252 3300048919 Ga0496116_0000069 Ga0496116_0000069_179530_180606 358
253 3300048920 Ga0496117_0000003 Ga0496117_0000003_1376982_1378058 358
254 3300048921 Ga0496118_0000001 Ga0496118_0000001_1376985_1378061 358
255 3300048922 Ga0496119_0001073 Ga0496119_0001073_25824_26900 358
256 3300048922 Ga0496119_0044880 Ga0496119_0044880_899_1975 358
257 3300048923 Ga0496120_0001262 Ga0496120_0001262_22899_23975 358
258 3300048924 Ga0496121_0000032 Ga0496121_0000032_269751_270827 358
259 3300048929 Ga0496126_0000067 Ga0496126_0000067_130970_132046 358
260 3300053087 Ga0500643_002530 Ga0500643_002530_925_2001 358

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01212

Beta_elim_lyase

Beta-eliminating lyase

58

356

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w0i-assembly1.cif.gz_C crystal structure of threonine aldolase from mycobacterium vanbaalenii 0.9676 17 350
7w0i-assembly1.cif.gz_C crystal structure of threonine aldolase from mycobacterium vanbaalenii 0.9591 17 350
5vye-assembly1.cif.gz_A crystal structure of l-threonine aldolase from pseudomonas putida 0.9585 15 355
7yvr-assembly1.cif.gz_D crystal structure of l-threonine aldolase from neptunomonas marina 0.9533 16 352
5vye-assembly1.cif.gz_A crystal structure of l-threonine aldolase from pseudomonas putida 0.9503 15 355
ID Description Score Start End Superfamily
5vyeD02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9644 27 263 3.40.640.10
1v72A02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9623 27 264 3.40.640.10
5vyeD02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9526 27 263 3.40.640.10
1v72A02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9506 27 264 3.40.640.10
af_Q2FYW6_6_248_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9328 21 256 3.40.640.10
ID Description Score Start End GO Terms
AF-D9VNC2-F1-model_v4 Aldolase 0.9917 69 355 GO:0006520
GO:0016829
AF-A0A542J3F7-F1-model_v4 deleted 0.9902 10 357
AF-A0A4Y8JRC5-F1-model_v4 Low specificity L-threonine aldolase 0.9897 10 357 GO:0006520
GO:0016829
AF-A0A7Y9EV52-F1-model_v4 Threonine aldolase (EC 4.1.2.5) 0.9893 10 355 GO:0004793
GO:0006520
AF-A0A3D9SQL0-F1-model_v4 L-threonine aldolase 0.9892 10 355 GO:0006520
GO:0016829

Feature Viewer

pLDDT pTM Quality
94.7 0.93 High
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Predicted Structure (AlphaFold2)

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