F369939

General Info

Members Datasets Scaffolds Average Seq Length
260 192 520 313

Family's Representative Sequence

Representative Sequence 3300054114|Ga0501084_0102015|Ga0501084_0102015_14_1111
Length 365
Sequence VEEDELTEATAPHAGRQAWDALRSAVGRAVIGAEDALRLVTVALLADGHVLIEDVPGIGKTLLARAVAAALGLRTARIQGTPDLLPTDVTGGSILEAGALRFVEGPVFTNILLVDEINRATPRTQSALLEAMQEHQVSVEGVTRTLPSPFLVIATQNPVEYEGTFALPEAQLDRFIVRTSIGYPAEDAERSIARRYRTAAEPLDDVPQVLDGPTVLSLREVVRRLHVGSEVEGYAVGLAAATRRHPQLSLGASPRATVALYRGGQAWAFLDGRDFVRPDDIKSIAPAVLGHRIVVELDQSLRGATAAAVIDELLATVPVPPLDGIAEVGPTAAAPGSERVSALAVGPAGPDGDGDRRYRRPEDRG

Samples

Sample ID Description Type Environment
1 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
2 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
46 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
52 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
105 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
108 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
109 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
110 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
111 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
112 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
113 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
114 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
115 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
116 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
117 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
118 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
119 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
120 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
121 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
122 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
123 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
124 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
125 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
126 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
127 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
128 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
129 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
130 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
131 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
132 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
133 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
134 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
135 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
136 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
137 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
138 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
139 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
140 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
141 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
142 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
143 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
144 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
145 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
146 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
147 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
148 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
149 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
150 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
151 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
152 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
153 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
154 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
155 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
156 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
157 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
158 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
159 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
162 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
163 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
164 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
165 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
166 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
172 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
173 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
174 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
175 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
176 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
177 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
180 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
181 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
182 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
183 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
184 2643221734 Bosea sp. Root670 Isolate Unclassified
185 2643221736 Bosea sp. Root483D1 Isolate Unclassified
186 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
187 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
188 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
189 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
190 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
191 641522639 Methylobacterium sp. 4-46 Isolate Nodule
192 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.77
Metatranscriptomes 0
Isolates 4.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.92
Nodule 1.54
Rhizoplane 2.69
Rhizosphere 85
Stem 0
Stem Tuber 0
Unclassified 0.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501084_0102015 3300054114 Bacteria 2410
2 Ga0055526_1000231 3300003771 Bacteria 46760
3 Ga0070658_10031386 3300005327 Bacteria 4266
4 Ga0070676_10029810 3300005328 Bacteria 3106
5 Ga0070690_100009735 3300005330 Bacteria 5574
6 Ga0070690_100061727 3300005330 Bacteria 2415
7 Ga0070670_100148598 3300005331 Bacteria 2028
8 Ga0068869_100042853 3300005334 Bacteria 3248
9 Ga0070680_100007076 3300005336 Bacteria 8552
10 Ga0070682_100006353 3300005337 Bacteria 6635
11 Ga0070682_100198925 3300005337 Bacteria 1412
12 Ga0070689_100003669 3300005340 Bacteria 10245
13 Ga0070687_100005797 3300005343 Bacteria 5018
14 Ga0070687_100134896 3300005343 Bacteria 1430
15 Ga0070668_100299215 3300005347 Bacteria 1349
16 Ga0070669_100006264 3300005353 Bacteria 8586
17 Ga0070675_100021564 3300005354 Bacteria 5148
18 Ga0070675_100099635 3300005354 Bacteria 2446
19 Ga0070674_100000578 3300005356 Bacteria 18484
20 Ga0070673_100007246 3300005364 Bacteria 7298
21 Ga0070688_100133548 3300005365 Bacteria 1677
22 Ga0070659_100232964 3300005366 Bacteria 1522
23 Ga0070667_100052671 3300005367 Bacteria 3435
24 Ga0070667_100243984 3300005367 Bacteria 1605
25 Ga0070701_10017998 3300005438 Bacteria 3315
26 Ga0070711_100265110 3300005439 Bacteria 1353
27 Ga0070700_100002136 3300005441 Bacteria 10024
28 Ga0070694_100148654 3300005444 Bacteria 1709
29 Ga0070708_100316284 3300005445 Bacteria 1471
30 Ga0070678_100033884 3300005456 Bacteria 3551
31 Ga0070681_10475134 3300005458 Bacteria 1163
32 Ga0070685_10016654 3300005466 Bacteria 3921
33 Ga0070685_10055514 3300005466 Bacteria 2302
34 Ga0070706_100158140 3300005467 Bacteria 2115
35 Ga0070698_100113222 3300005471 Bacteria 2678
36 Ga0070698_100244762 3300005471 Bacteria 1726
37 Ga0070698_100251990 3300005471 Bacteria 1698
38 Ga0070679_100006761 3300005530 Bacteria 10696
39 Ga0070684_100030331 3300005535 Bacteria 4593
40 Ga0070697_100075822 3300005536 Bacteria 2765
41 Ga0070672_100111808 3300005543 Bacteria 2227
42 Ga0070672_100281275 3300005543 Bacteria 1407
43 Ga0070686_100002754 3300005544 Bacteria 9679
44 Ga0070686_100007242 3300005544 Bacteria 6181
45 Ga0070686_100061440 3300005544 Bacteria 2428
46 Ga0070695_100157053 3300005545 Bacteria 1593
47 Ga0070665_100134863 3300005548 Bacteria 2471
48 Ga0068855_100067074 3300005563 Bacteria 4182
49 Ga0068859_100373304 3300005617 Bacteria 1522
50 Ga0068864_100081186 3300005618 Bacteria 2842
51 Ga0068861_100006552 3300005719 Bacteria 7943
52 Ga0068861_100009772 3300005719 Bacteria 6634
53 Ga0068863_100012300 3300005841 Bacteria 8262
54 Ga0068863_100016042 3300005841 Bacteria 7184
55 Ga0068858_100084941 3300005842 Bacteria 2944
56 Ga0068860_100027568 3300005843 Bacteria 5470
57 Ga0068862_100025458 3300005844 Bacteria 4968
58 Ga0081455_10207733 3300005937 Bacteria 1461
59 Ga0075369_10024213 3300006186 Bacteria 2514
60 Ga0075428_100273284 3300006844 Bacteria 1818
61 Ga0075430_100000524 3300006846 Bacteria 28918
62 Ga0075433_10064705 3300006852 Bacteria 3206
63 Ga0097620_100373342 3300006931 Bacteria 1522
64 Ga0099794_10001125 3300007265 Bacteria 9160
65 Ga0099795_10005407 3300007788 Bacteria 3393
66 Ga0105240_10000706 3300009093 Bacteria 61234
67 Ga0111539_10021807 3300009094 Bacteria 7876
68 Ga0114129_10208843 3300009147 Bacteria 2641
69 Ga0105243_10080232 3300009148 Bacteria 2661
70 Ga0105243_10346393 3300009148 Bacteria 1363
71 Ga0105248_10111102 3300009177 Bacteria 3091
72 Ga0105238_10007956 3300009551 Bacteria 10607
73 Ga0105249_10104247 3300009553 Bacteria 2672
74 Ga0099796_10004234 3300010159 Bacteria 3446
75 Ga0105239_10154178 3300010375 Bacteria 2565
76 Ga0171462_1013 3300013250 Bacteria 202864
77 Ga0163162_10135564 3300013306 Bacteria 2572
78 Ga0157375_10077338 3300013308 Bacteria 3357
79 Ga0163163_10026793 3300014325 Bacteria 5514
80 Ga0157379_10103797 3300014968 Bacteria 2551
81 Ga0213876_10006512 3300021384 Bacteria 6366
82 Ga0213876_10033683 3300021384 Bacteria 2700
83 Ga0209564_1000023 3300025295 Bacteria 555102
84 Ga0207697_10049035 3300025315 Bacteria 1742
85 Ga0207653_10070057 3300025885 Bacteria 1197
86 Ga0207680_10042008 3300025903 Bacteria 2672
87 Ga0207680_10084449 3300025903 Bacteria 2003
88 Ga0207645_10002137 3300025907 Bacteria 15797
89 Ga0207705_10007651 3300025909 Bacteria 7943
90 Ga0207684_10220555 3300025910 Bacteria 1637
91 Ga0207695_10034488 3300025913 Bacteria 5503
92 Ga0207693_10031532 3300025915 Bacteria 4188
93 Ga0207663_10199333 3300025916 Bacteria 1443
94 Ga0207660_10039712 3300025917 Bacteria 3291
95 Ga0207662_10009902 3300025918 Bacteria 5258
96 Ga0207662_10043775 3300025918 Bacteria 2642
97 Ga0207652_10006851 3300025921 Bacteria 9183
98 Ga0207652_10215701 3300025921 Bacteria 1729
99 Ga0207681_10005521 3300025923 Bacteria 7767
100 Ga0207694_10017429 3300025924 Bacteria 5429
101 Ga0207650_10097083 3300025925 Bacteria 2261
102 Ga0207700_10106756 3300025928 Bacteria 2245
103 Ga0207644_10472299 3300025931 Bacteria 1032
104 Ga0207670_10085717 3300025936 Bacteria 2214
105 Ga0207691_10014165 3300025940 Bacteria 7608
106 Ga0207691_10014488 3300025940 Bacteria 7519
107 Ga0207691_10031237 3300025940 Bacteria 4972
108 Ga0207689_10030266 3300025942 Bacteria 4511
109 Ga0207651_10031696 3300025960 Bacteria 3383
110 Ga0207712_10127050 3300025961 Bacteria 1937
111 Ga0207668_10078021 3300025972 Bacteria 2390
112 Ga0207658_10152881 3300025986 Bacteria 1882
113 Ga0207677_10083199 3300026023 Bacteria 2303
114 Ga0207703_10157393 3300026035 Bacteria 1987
115 Ga0207678_10003911 3300026067 Bacteria 13398
116 Ga0207708_10001079 3300026075 Bacteria 20429
117 Ga0207641_10018459 3300026088 Bacteria 5719
118 Ga0207641_10018970 3300026088 Bacteria 5642
119 Ga0207648_10016564 3300026089 Bacteria 6730
120 Ga0207676_10074916 3300026095 Bacteria 2729
121 Ga0207675_100001199 3300026118 Bacteria 25851
122 Ga0207675_100006363 3300026118 Bacteria 11196
123 Ga0207683_10158281 3300026121 Bacteria 2046
124 Ga0207698_10239562 3300026142 Bacteria 1652
125 Ga0209588_1009602 3300027671 Bacteria 2894
126 Ga0207428_10028630 3300027907 Bacteria 4626
127 Ga0207428_10072533 3300027907 Bacteria 2702
128 Ga0268265_10051792 3300028380 Bacteria 3100
129 Ga0268264_10135823 3300028381 Bacteria 2186
130 Ga0265326_10044933 3300028558 Bacteria 1253
131 Ga0265319_1049697 3300028563 Bacteria 1388
132 Ga0265318_10000011 3300028577 Bacteria 231078
133 Ga0265323_10004548 3300028653 Bacteria 5971
134 Ga0265323_10012535 3300028653 Bacteria 3396
135 Ga0265322_10014890 3300028654 Bacteria 2247
136 Ga0265322_10023355 3300028654 Bacteria 1768
137 Ga0265338_10042190 3300028800 Bacteria 4254
138 Ga0265324_10000042 3300029957 Bacteria 110776
139 Ga0265330_10000019 3300031235 Bacteria 156905
140 Ga0265330_10004475 3300031235 Bacteria 7089
141 Ga0265330_10007872 3300031235 Bacteria 5166
142 Ga0265330_10050697 3300031235 Bacteria 1820
143 Ga0265332_10000209 3300031238 Bacteria 47448
144 Ga0265332_10011761 3300031238 Bacteria 3886
145 Ga0265328_10001674 3300031239 Bacteria 10146
146 Ga0265320_10000005 3300031240 Bacteria 354422
147 Ga0265320_10009323 3300031240 Bacteria 5927
148 Ga0265320_10024185 3300031240 Bacteria 3218
149 Ga0265325_10001496 3300031241 Bacteria 16433
150 Ga0265329_10000246 3300031242 Bacteria 29034
151 Ga0265329_10007391 3300031242 Bacteria 4258
152 Ga0265329_10016411 3300031242 Bacteria 2566
153 Ga0265339_10000008 3300031249 Bacteria 239647
154 Ga0265339_10007868 3300031249 Bacteria 6839
155 Ga0265331_10000207 3300031250 Bacteria 71159
156 Ga0265331_10001814 3300031250 Bacteria 15138
157 Ga0265316_10000146 3300031344 Bacteria 77550
158 Ga0265316_10000494 3300031344 Bacteria 44582
159 Ga0265316_10001062 3300031344 Bacteria 29760
160 Ga0265316_10002357 3300031344 Bacteria 19688
161 Ga0265316_10012294 3300031344 Bacteria 7682
162 Ga0265316_10021510 3300031344 Bacteria 5461
163 Ga0307513_10000274 3300031456 Bacteria 74965
164 Ga0265313_10000405 3300031595 Bacteria 46463
165 Ga0265314_10000323 3300031711 Bacteria 67374
166 Ga0265314_10000824 3300031711 Bacteria 36839
167 Ga0265314_10010065 3300031711 Bacteria 7927
168 Ga0265342_10001002 3300031712 Bacteria 27830
169 Ga0265342_10002436 3300031712 Bacteria 16078
170 Ga0265342_10003635 3300031712 Bacteria 12551
171 Ga0265342_10022180 3300031712 Bacteria 4041
172 Ga0265342_10046613 3300031712 Bacteria 2604
173 Ga0316576_10013651 3300031727 Bacteria 5408
174 Ga0316576_10090122 3300031727 Bacteria 2284
175 Ga0316576_10153226 3300031727 Bacteria 1737
176 Ga0316576_10171973 3300031727 Bacteria 1635
177 Ga0307407_10093297 3300031903 Bacteria 1851
178 Ga0307416_100482735 3300032002 Bacteria 1300
179 Ga0373940_0011167 3300035088 Bacteria 2128
180 Ga0373941_0002479 3300035115 Bacteria 4071
181 Ga0373955_0164510 3300035172 Bacteria 1311
182 Ga0373955_0307030 3300035172 Bacteria 957
183 Ga0373962_0027000 3300035242 Bacteria 1551
184 Ga0316574_0020357 3300035398 Bacteria 3927
185 Ga0373935_0056334 3300035692 Bacteria 2506
186 Ga0373935_0087396 3300035692 Bacteria 2036
187 Ga0373933_0000615 3300035724 Bacteria 22258
188 Ga0373937_0179600 3300036401 Bacteria 1987
189 Ga0373925_0014946 3300037068 Bacteria 5612
190 Ga0436364_0978556 3300037853 Bacteria 19840
191 Ga0436364_1257734 3300037853 Bacteria 12089
192 Ga0436364_1342239 3300037853 Bacteria 4395
193 Ga0400483_250497 3300039062 Bacteria 1085
194 Ga0436365_0289839 3300039437 Bacteria 83593
195 Ga0436365_0407929 3300039437 Bacteria 2237
196 Ga0436365_1084576 3300039437 Bacteria 1370
197 Ga0436365_1227632 3300039437 Bacteria 2373
198 Ga0436365_1669439 3300039437 Bacteria 1856
199 Ga0436365_1755010 3300039437 Bacteria 18382
200 Ga0436365_1828646 3300039437 Bacteria 4714
201 Ga0439466_0025398 3300041411 Bacteria 2068
202 Ga0439465_0000888 3300041413 Bacteria 9447
203 Ga0451853_0914922 3300041512 Bacteria 10142
204 Ga0451577_0044581 3300042876 Bacteria 3971
205 Ga0453683_0011990 3300044673 Bacteria 5693
206 Ga0453683_0056758 3300044673 Unclassified 2450
207 Ga0453684_0000049 3300044712 Bacteria 559289
208 Ga0453684_0114336 3300044712 Bacteria 3272
209 Ga0466960_0114520 3300044901 Bacteria 1405
210 Ga0451576_0213102 3300045051 Bacteria 2017
211 Ga0451576_0570629 3300045051 Bacteria 1189
212 Ga0451576_0747912 3300045051 Bacteria 1027
213 Ga0466967_0332316 3300045976 Bacteria 1468
214 Ga0495664_0041161 3300046477 Bacteria 2733
215 Ga0495594_0033589 3300046499 Bacteria 2790
216 Ga0495630_0027318 3300046517 Bacteria 4232
217 Ga0495668_0210574 3300046616 Bacteria 1064
218 Ga0495634_0001781 3300046642 Bacteria 18639
219 Ga0495674_0003902 3300047319 Bacteria 14481
220 Ga0496101_0116560 3300048904 Bacteria 2015
221 Ga0496104_0247809 3300048907 Bacteria 1694
222 Ga0496107_0032898 3300048910 Bacteria 3708
223 Ga0496112_0012787 3300048915 Bacteria 7725
224 Ga0496113_0308032 3300048916 Bacteria 1269
225 Ga0496114_0000112 3300048917 Bacteria 58559
226 Ga0496115_0017566 3300048918 Bacteria 5473
227 Ga0496122_0238407 3300048925 Bacteria 1028
228 Ga0496123_0002452 3300048926 Bacteria 22988
229 Ga0501031_0029440 3300049568 Bacteria 3582
230 Ga0501034_0115030 3300049571 Bacteria 2679
231 Ga0501034_0143861 3300049571 Bacteria 2363
232 Ga0501034_0471734 3300049571 Bacteria 1171
233 Ga0501037_0068860 3300049573 Bacteria 2577
234 Ga0501038_0282017 3300049574 Bacteria 1308
235 Ga0501070_0111649 3300049586 Bacteria 2260
236 Ga0501072_0002406 3300049588 Bacteria 14034
237 Ga0501072_0196410 3300049588 Bacteria 1609
238 Ga0501073_0000465 3300049589 Bacteria 28093
239 Ga0501073_0035370 3300049589 Bacteria 3552
240 Ga0501076_0003322 3300049592 Bacteria 11284
241 Ga0501080_0248120 3300049742 Bacteria 1623
242 Ga0501044_0107339 3300049823 Bacteria 2803
243 nmdc:mga0qj67_491_c1 3300050509 Bacteria 26960
244 nmdc:mga08y16_42160_c1 3300050511 Bacteria 4780
245 nmdc:mga08y16_7202_c1 3300050511 Bacteria 11672
246 nmdc:mga0a205_189859_c1 3300050515 Bacteria 1947
247 nmdc:mga0sz30_66844_c1 3300050516 Bacteria 1543
248 Ga0495601_0105150 3300053077 Bacteria 1825
249 Ga0500555_008723 3300053103 Bacteria 2894
250 2545679079 2545555834 Bacteria 8130841
251 2599103336 2597490356 Bacteria 7030811
252 2644735623 2643221734 Bacteria 5365412
253 2644744067 2643221736 Bacteria 6608466
254 2841914889 2841911363 Bacteria 6173697
255 2841919868 2841917233 Bacteria 6173500
256 2846953220 2846952575 Bacteria 6587527
257 2919042617 2919042368 Bacteria 3905917
258 2929212751 2929212328 Bacteria 7708288
259 641641489 641522639 Bacteria 7737025
260 8001848537 8001845381 Bacteria 5804942
261 Ga0501084_0102015
262 Ga0055526_1000231
263 Ga0070658_10031386
264 Ga0070676_10029810
265 Ga0070690_100009735
266 Ga0070690_100061727
267 Ga0070670_100148598
268 Ga0068869_100042853
269 Ga0070680_100007076
270 Ga0070682_100006353
271 Ga0070682_100198925
272 Ga0070689_100003669
273 Ga0070687_100005797
274 Ga0070687_100134896
275 Ga0070668_100299215
276 Ga0070669_100006264
277 Ga0070675_100021564
278 Ga0070675_100099635
279 Ga0070674_100000578
280 Ga0070673_100007246
281 Ga0070688_100133548
282 Ga0070659_100232964
283 Ga0070667_100052671
284 Ga0070667_100243984
285 Ga0070701_10017998
286 Ga0070711_100265110
287 Ga0070700_100002136
288 Ga0070694_100148654
289 Ga0070708_100316284
290 Ga0070678_100033884
291 Ga0070681_10475134
292 Ga0070685_10016654
293 Ga0070685_10055514
294 Ga0070706_100158140
295 Ga0070698_100113222
296 Ga0070698_100244762
297 Ga0070698_100251990
298 Ga0070679_100006761
299 Ga0070684_100030331
300 Ga0070697_100075822
301 Ga0070672_100111808
302 Ga0070672_100281275
303 Ga0070686_100002754
304 Ga0070686_100007242
305 Ga0070686_100061440
306 Ga0070695_100157053
307 Ga0070665_100134863
308 Ga0068855_100067074
309 Ga0068859_100373304
310 Ga0068864_100081186
311 Ga0068861_100006552
312 Ga0068861_100009772
313 Ga0068863_100012300
314 Ga0068863_100016042
315 Ga0068858_100084941
316 Ga0068860_100027568
317 Ga0068862_100025458
318 Ga0081455_10207733
319 Ga0075369_10024213
320 Ga0075428_100273284
321 Ga0075430_100000524
322 Ga0075433_10064705
323 Ga0097620_100373342
324 Ga0099794_10001125
325 Ga0099795_10005407
326 Ga0105240_10000706
327 Ga0111539_10021807
328 Ga0114129_10208843
329 Ga0105243_10080232
330 Ga0105243_10346393
331 Ga0105248_10111102
332 Ga0105238_10007956
333 Ga0105249_10104247
334 Ga0099796_10004234
335 Ga0105239_10154178
336 Ga0171462_1013
337 Ga0163162_10135564
338 Ga0157375_10077338
339 Ga0163163_10026793
340 Ga0157379_10103797
341 Ga0213876_10006512
342 Ga0213876_10033683
343 Ga0209564_1000023
344 Ga0207697_10049035
345 Ga0207653_10070057
346 Ga0207680_10042008
347 Ga0207680_10084449
348 Ga0207645_10002137
349 Ga0207705_10007651
350 Ga0207684_10220555
351 Ga0207695_10034488
352 Ga0207693_10031532
353 Ga0207663_10199333
354 Ga0207660_10039712
355 Ga0207662_10009902
356 Ga0207662_10043775
357 Ga0207652_10006851
358 Ga0207652_10215701
359 Ga0207681_10005521
360 Ga0207694_10017429
361 Ga0207650_10097083
362 Ga0207700_10106756
363 Ga0207644_10472299
364 Ga0207670_10085717
365 Ga0207691_10014165
366 Ga0207691_10014488
367 Ga0207691_10031237
368 Ga0207689_10030266
369 Ga0207651_10031696
370 Ga0207712_10127050
371 Ga0207668_10078021
372 Ga0207658_10152881
373 Ga0207677_10083199
374 Ga0207703_10157393
375 Ga0207678_10003911
376 Ga0207708_10001079
377 Ga0207641_10018459
378 Ga0207641_10018970
379 Ga0207648_10016564
380 Ga0207676_10074916
381 Ga0207675_100001199
382 Ga0207675_100006363
383 Ga0207683_10158281
384 Ga0207698_10239562
385 Ga0209588_1009602
386 Ga0207428_10028630
387 Ga0207428_10072533
388 Ga0268265_10051792
389 Ga0268264_10135823
390 Ga0265326_10044933
391 Ga0265319_1049697
392 Ga0265318_10000011
393 Ga0265323_10004548
394 Ga0265323_10012535
395 Ga0265322_10014890
396 Ga0265322_10023355
397 Ga0265338_10042190
398 Ga0265324_10000042
399 Ga0265330_10000019
400 Ga0265330_10004475
401 Ga0265330_10007872
402 Ga0265330_10050697
403 Ga0265332_10000209
404 Ga0265332_10011761
405 Ga0265328_10001674
406 Ga0265320_10000005
407 Ga0265320_10009323
408 Ga0265320_10024185
409 Ga0265325_10001496
410 Ga0265329_10000246
411 Ga0265329_10007391
412 Ga0265329_10016411
413 Ga0265339_10000008
414 Ga0265339_10007868
415 Ga0265331_10000207
416 Ga0265331_10001814
417 Ga0265316_10000146
418 Ga0265316_10000494
419 Ga0265316_10001062
420 Ga0265316_10002357
421 Ga0265316_10012294
422 Ga0265316_10021510
423 Ga0307513_10000274
424 Ga0265313_10000405
425 Ga0265314_10000323
426 Ga0265314_10000824
427 Ga0265314_10010065
428 Ga0265342_10001002
429 Ga0265342_10002436
430 Ga0265342_10003635
431 Ga0265342_10022180
432 Ga0265342_10046613
433 Ga0316576_10013651
434 Ga0316576_10090122
435 Ga0316576_10153226
436 Ga0316576_10171973
437 Ga0307407_10093297
438 Ga0307416_100482735
439 Ga0373940_0011167
440 Ga0373941_0002479
441 Ga0373955_0164510
442 Ga0373955_0307030
443 Ga0373962_0027000
444 Ga0316574_0020357
445 Ga0373935_0056334
446 Ga0373935_0087396
447 Ga0373933_0000615
448 Ga0373937_0179600
449 Ga0373925_0014946
450 Ga0436364_0978556
451 Ga0436364_1257734
452 Ga0436364_1342239
453 Ga0400483_250497
454 Ga0436365_0289839
455 Ga0436365_0407929
456 Ga0436365_1084576
457 Ga0436365_1227632
458 Ga0436365_1669439
459 Ga0436365_1755010
460 Ga0436365_1828646
461 Ga0439466_0025398
462 Ga0439465_0000888
463 Ga0451853_0914922
464 Ga0451577_0044581
465 Ga0453683_0011990
466 Ga0453683_0056758
467 Ga0453684_0000049
468 Ga0453684_0114336
469 Ga0466960_0114520
470 Ga0451576_0213102
471 Ga0451576_0570629
472 Ga0451576_0747912
473 Ga0466967_0332316
474 Ga0495664_0041161
475 Ga0495594_0033589
476 Ga0495630_0027318
477 Ga0495668_0210574
478 Ga0495634_0001781
479 Ga0495674_0003902
480 Ga0496101_0116560
481 Ga0496104_0247809
482 Ga0496107_0032898
483 Ga0496112_0012787
484 Ga0496113_0308032
485 Ga0496114_0000112
486 Ga0496115_0017566
487 Ga0496122_0238407
488 Ga0496123_0002452
489 Ga0501031_0029440
490 Ga0501034_0115030
491 Ga0501034_0143861
492 Ga0501034_0471734
493 Ga0501037_0068860
494 Ga0501038_0282017
495 Ga0501070_0111649
496 Ga0501072_0002406
497 Ga0501072_0196410
498 Ga0501073_0000465
499 Ga0501073_0035370
500 Ga0501076_0003322
501 Ga0501080_0248120
502 Ga0501044_0107339
503 nmdc:mga0qj67_491_c1
504 nmdc:mga08y16_42160_c1
505 nmdc:mga08y16_7202_c1
506 nmdc:mga0a205_189859_c1
507 nmdc:mga0sz30_66844_c1
508 Ga0495601_0105150
509 Ga0500555_008723
510 2545679079
511 2599103336
512 2644735623
513 2644744067
514 2841914889
515 2841919868
516 2846953220
517 2919042617
518 2929212751
519 641641489
520 8001848537

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07726

AAA_3

ATPase family associated with various cellular activities (AAA)

49

177

0.98

PF17863

AAA_lid_2

AAA lid domain

240

313

0.96

PF07728

AAA_5

AAA domain (dynein-related subfamily)

49

175

0.92

PF00493

MCM

MCM P-loop domain

4

175

0.77

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

50

183

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
2r44-assembly1.cif.gz_A crystal structure of a putative atpase (chu_0153) from cytophaga hutchinsonii atcc 33406 at 2.00 a resolution 0.9274 21 327
2r44-assembly1.cif.gz_A crystal structure of a putative atpase (chu_0153) from cytophaga hutchinsonii atcc 33406 at 2.00 a resolution 0.8703 21 327
6q7m-assembly1.cif.gz_Z spiral structure of e. coli rava in the rava-ldci cage-like complex 0.7902 21 323
4upb-assembly1.cif.gz_C electron cryo-microscopy of the complex formed between the hexameric atpase rava and the decameric inducible decarboxylase ldci 0.79 21 323
3nbx-assembly1.cif.gz_X crystal structure of e. coli rava (regulatory atpase variant a) in complex with adp 0.7895 21 319
ID Description Score Start End Superfamily
af_I6YGX9_248_354_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9882 210 323 1.10.8.80
af_Q79FN7_233_349_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9735 208 323 1.10.8.80
af_I6YGX9_248_354_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.97 210 323 1.10.8.80
af_Q79FN7_37_232_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9585 24 208 3.40.50.300
af_Q79FN7_233_349_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9574 208 323 1.10.8.80
ID Description Score Start End GO Terms
AF-A0A355GK97-F1-model_v4 AAA family ATPase 0.989 22 142 GO:0005524
GO:0016887
AF-A0A660ZG47-F1-model_v4 AAA family ATPase 0.9861 23 195 GO:0005524
GO:0016887
AF-A0A357XU77-F1-model_v4 ATPase 0.9841 230 326
AF-A0A661F9K0-F1-model_v4 AAA family ATPase 0.9837 22 192 GO:0005524
GO:0016887
AF-A0A349KL67-F1-model_v4 AAA family ATPase 0.9804 22 161 GO:0005524
GO:0016887

Map