F369680

General Info

Members Datasets Scaffolds Average Seq Length
260 31 520 87

Family's Representative Sequence

Representative Sequence 3300033527|Ga0316586_1022906|Ga0316586_10229061
Length 96
Sequence MAAPSRGPKGHRRDSNPRRKRRIYHRRKVCRFCADSSLVITYKDPKSLRYFITERGKIIPRRLSGCCAKHQRTLTHAVKQARTIAFLPFVGSVDLR

Samples

Sample ID Description Type Environment
1 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
3 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
4 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
5 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
6 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
7 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
8 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
9 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
10 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
11 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
12 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
13 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
14 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
15 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
16 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
17 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
18 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
19 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
20 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
21 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
22 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
23 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
24 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
25 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
26 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
27 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
28 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
29 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
30 3300049541 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_A_4_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
31 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 60.77
Metatranscriptomes 38.85
Isolates 0.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 92.69
Stem 0
Stem Tuber 0
Unclassified 22.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316586_1022906 3300033527 Bacteria 1041
2 Ga0316575_10000076 3300031665 Bacteria 24296
3 Ga0316575_10023091 3300031665 Unclassified 2402
4 Ga0316575_10078018 3300031665 Unclassified 1334
5 Ga0316575_10090458 3300031665 Bacteria 1239
6 Ga0316575_10111581 3300031665 Unclassified 1115
7 Ga0316575_10127623 3300031665 Bacteria 1042
8 Ga0316575_10267966 3300031665 Bacteria 718
9 Ga0316579_10002818 3300031691 Bacteria 6652
10 Ga0316579_10006725 3300031691 Bacteria 4708
11 Ga0316579_10028481 3300031691 Bacteria 2543
12 Ga0316579_10050721 3300031691 Bacteria 1941
13 Ga0316579_10056689 3300031691 Unclassified 1839
14 Ga0316579_10085059 3300031691 Bacteria 1509
15 Ga0316579_10133572 3300031691 Bacteria 1196
16 Ga0316579_10185085 3300031691 Bacteria 1007
17 Ga0316579_10250563 3300031691 Bacteria 856
18 Ga0316579_10304455 3300031691 Unclassified 770
19 Ga0316579_10395235 3300031691 Bacteria 668
20 Ga0316579_10397063 3300031691 Bacteria 667
21 Ga0316579_10434797 3300031691 Unclassified 635
22 Ga0316576_10000484 3300031727 Bacteria 18675
23 Ga0316576_10011207 3300031727 Bacteria 5862
24 Ga0316576_10056334 3300031727 Bacteria 2870
25 Ga0316576_10061659 3300031727 Unclassified 2749
26 Ga0316576_10076966 3300031727 Bacteria 2469
27 Ga0316576_10109624 3300031727 Bacteria 2069
28 Ga0316576_10112875 3300031727 Bacteria 2037
29 Ga0316576_10117140 3300031727 Unclassified 1999
30 Ga0316576_10144241 3300031727 Bacteria 1793
31 Ga0316576_10161052 3300031727 Bacteria 1692
32 Ga0316576_10189334 3300031727 Bacteria 1552
33 Ga0316576_10191487 3300031727 Unclassified 1542
34 Ga0316576_10193232 3300031727 Bacteria 1534
35 Ga0316576_10194353 3300031727 Unclassified 1529
36 Ga0316576_10296374 3300031727 Bacteria 1209
37 Ga0316576_10409883 3300031727 Unclassified 1004
38 Ga0316576_10462519 3300031727 Bacteria 936
39 Ga0316576_10488610 3300031727 Unclassified 906
40 Ga0316576_10563830 3300031727 Bacteria 834
41 Ga0316576_10597170 3300031727 Bacteria 806
42 Ga0316576_10736921 3300031727 Bacteria 712
43 Ga0316576_10870091 3300031727 Unclassified 646
44 Ga0316578_10007057 3300031728 Bacteria 5597
45 Ga0316578_10016661 3300031728 Bacteria 3982
46 Ga0316578_10032971 3300031728 Unclassified 2963
47 Ga0316578_10114787 3300031728 Bacteria 1618
48 Ga0316578_10160322 3300031728 Bacteria 1356
49 Ga0316578_10168389 3300031728 Bacteria 1320
50 Ga0316578_10183385 3300031728 Bacteria 1261
51 Ga0316578_10195958 3300031728 Bacteria 1216
52 Ga0316578_10272256 3300031728 Bacteria 1015
53 Ga0316578_10352761 3300031728 Unclassified 875
54 Ga0316578_10370303 3300031728 Unclassified 851
55 Ga0316578_10529685 3300031728 Bacteria 693
56 Ga0316577_10000165 3300031733 Bacteria 21068
57 Ga0316577_10067668 3300031733 Unclassified 1993
58 Ga0316577_10072722 3300031733 Bacteria 1919
59 Ga0316577_10086809 3300031733 Bacteria 1751
60 Ga0316577_10221595 3300031733 Bacteria 1069
61 Ga0316577_10292260 3300031733 Bacteria 923
62 Ga0316577_10302621 3300031733 Bacteria 906
63 Ga0316577_10310063 3300031733 Unclassified 894
64 Ga0316577_10396258 3300031733 Unclassified 784
65 Ga0316577_10646323 3300031733 Bacteria 601
66 Ga0316583_10004740 3300032133 Bacteria 4859
67 Ga0316583_10005342 3300032133 Bacteria 4608
68 Ga0316583_10025664 3300032133 Bacteria 2104
69 Ga0316583_10026975 3300032133 Bacteria 2050
70 Ga0316583_10043203 3300032133 Unclassified 1592
71 Ga0316583_10162634 3300032133 Bacteria 777
72 Ga0316585_10005887 3300032137 Bacteria 3481
73 Ga0316585_10011316 3300032137 Bacteria 2630
74 Ga0316585_10013815 3300032137 Unclassified 2407
75 Ga0316585_10022774 3300032137 Bacteria 1928
76 Ga0316585_10022803 3300032137 Bacteria 1927
77 Ga0316585_10081906 3300032137 Bacteria 1051
78 Ga0316585_10148684 3300032137 Unclassified 773
79 Ga0316580_10000796 3300032139 Bacteria 7718
80 Ga0316580_10024412 3300032139 Unclassified 1868
81 Ga0316580_10038478 3300032139 Bacteria 1478
82 Ga0316580_10099803 3300032139 Bacteria 889
83 Ga0316580_10143593 3300032139 Unclassified 732
84 Ga0316580_10196359 3300032139 Bacteria 622
85 Ga0316580_10208010 3300032139 Unclassified 603
86 Ga0316580_10265524 3300032139 Bacteria 531
87 Ga0316593_10003782 3300032168 Bacteria 3802
88 Ga0316593_10008374 3300032168 Bacteria 2881
89 Ga0316593_10010534 3300032168 Bacteria 2655
90 Ga0316593_10019838 3300032168 Bacteria 2082
91 Ga0316593_10031950 3300032168 Unclassified 1717
92 Ga0316593_10035091 3300032168 Unclassified 1649
93 Ga0316593_10036500 3300032168 Bacteria 1621
94 Ga0316593_10039923 3300032168 Bacteria 1558
95 Ga0316593_10049162 3300032168 Unclassified 1421
96 Ga0316593_10050164 3300032168 Bacteria 1407
97 Ga0316593_10052441 3300032168 Bacteria 1381
98 Ga0316593_10064745 3300032168 Bacteria 1255
99 Ga0316593_10078905 3300032168 Unclassified 1147
100 Ga0316593_10083199 3300032168 Bacteria 1119
101 Ga0316593_10091204 3300032168 Bacteria 1073
102 Ga0316593_10092644 3300032168 Bacteria 1065
103 Ga0316593_10122395 3300032168 Unclassified 935
104 Ga0316593_10124024 3300032168 Bacteria 929
105 Ga0316593_10133906 3300032168 Bacteria 895
106 Ga0316593_10136496 3300032168 Unclassified 887
107 Ga0316593_10137420 3300032168 Bacteria 884
108 Ga0316593_10181971 3300032168 Bacteria 773
109 Ga0316593_10186194 3300032168 Bacteria 764
110 Ga0316593_10208936 3300032168 Bacteria 723
111 Ga0316593_10240321 3300032168 Unclassified 676
112 Ga0316593_10258289 3300032168 Bacteria 653
113 Ga0316593_10295857 3300032168 Bacteria 612
114 Ga0316593_10453472 3300032168 Unclassified 501
115 Ga0316592_1006548 3300033524 Bacteria 2247
116 Ga0316592_1017479 3300033524 Bacteria 1505
117 Ga0316592_1018192 3300033524 Bacteria 1479
118 Ga0316592_1020035 3300033524 Bacteria 1418
119 Ga0316592_1020148 3300033524 Bacteria 1415
120 Ga0316592_1023618 3300033524 Bacteria 1321
121 Ga0316592_1024154 3300033524 Bacteria 1307
122 Ga0316592_1026748 3300033524 Bacteria 1246
123 Ga0316592_1028922 3300033524 Bacteria 1202
124 Ga0316592_1031938 3300033524 Bacteria 1148
125 Ga0316592_1035377 3300033524 Bacteria 1096
126 Ga0316592_1039641 3300033524 Bacteria 1041
127 Ga0316592_1047240 3300033524 Unclassified 959
128 Ga0316592_1048038 3300033524 Bacteria 951
129 Ga0316592_1048480 3300033524 Bacteria 947
130 Ga0316592_1051481 3300033524 Bacteria 920
131 Ga0316592_1090743 3300033524 Unclassified 699
132 Ga0316592_1094864 3300033524 Bacteria 684
133 Ga0316592_1096277 3300033524 Bacteria 679
134 Ga0316592_1148311 3300033524 Unclassified 553
135 Ga0316586_1013192 3300033527 Bacteria 1290
136 Ga0316586_1014261 3300033527 Bacteria 1253
137 Ga0316586_1018054 3300033527 Bacteria 1143
138 Ga0316586_1035473 3300033527 Unclassified 865
139 Ga0316588_1006654 3300033528 Bacteria 2319
140 Ga0316588_1017185 3300033528 Bacteria 1610
141 Ga0316588_1017277 3300033528 Unclassified 1607
142 Ga0316588_1039629 3300033528 Bacteria 1124
143 Ga0316588_1039726 3300033528 Bacteria 1123
144 Ga0316588_1045638 3300033528 Bacteria 1055
145 Ga0316588_1045709 3300033528 Bacteria 1054
146 Ga0316588_1047399 3300033528 Bacteria 1037
147 Ga0316588_1055800 3300033528 Unclassified 961
148 Ga0316588_1103861 3300033528 Bacteria 712
149 Ga0316588_1104221 3300033528 Bacteria 711
150 Ga0316588_1105387 3300033528 Bacteria 708
151 Ga0316588_1194469 3300033528 Bacteria 529
152 Ga0316587_1035619 3300033529 Bacteria 890
153 Ga0316587_1042082 3300033529 Bacteria 826
154 Ga0316587_1059689 3300033529 Bacteria 706
155 Ga0316587_1085970 3300033529 Unclassified 597
156 Ga0316596_1009748 3300033541 Bacteria 2309
157 Ga0316596_1011033 3300033541 Unclassified 2199
158 Ga0316596_1020426 3300033541 Bacteria 1683
159 Ga0316596_1020514 3300033541 Unclassified 1680
160 Ga0316596_1022175 3300033541 Unclassified 1622
161 Ga0316596_1024379 3300033541 Unclassified 1553
162 Ga0316596_1030909 3300033541 Bacteria 1390
163 Ga0316596_1032247 3300033541 Bacteria 1363
164 Ga0316596_1032315 3300033541 Bacteria 1361
165 Ga0316596_1036323 3300033541 Bacteria 1288
166 Ga0316596_1038195 3300033541 Bacteria 1258
167 Ga0316596_1038471 3300033541 Bacteria 1253
168 Ga0316596_1043129 3300033541 Bacteria 1187
169 Ga0316596_1049485 3300033541 Bacteria 1111
170 Ga0316596_1058707 3300033541 Bacteria 1025
171 Ga0316596_1059532 3300033541 Unclassified 1018
172 Ga0316596_1068743 3300033541 Bacteria 948
173 Ga0316596_1078444 3300033541 Unclassified 887
174 Ga0316596_1085421 3300033541 Bacteria 849
175 Ga0316596_1096402 3300033541 Bacteria 798
176 Ga0316596_1100080 3300033541 Bacteria 784
177 Ga0316596_1110476 3300033541 Bacteria 746
178 Ga0316596_1135373 3300033541 Bacteria 674
179 Ga0316596_1138741 3300033541 Unclassified 665
180 Ga0316596_1172350 3300033541 Bacteria 598
181 Ga0316596_1173939 3300033541 Unclassified 595
182 Ga0316596_1179489 3300033541 Unclassified 586
183 Ga0316596_1195520 3300033541 Bacteria 562
184 Ga0316596_1211830 3300033541 Unclassified 541
185 Ga0316574_0002124 3300035398 Bacteria 9827
186 Ga0316574_0002576 3300035398 Bacteria 9131
187 Ga0316574_0049589 3300035398 Bacteria 2611
188 Ga0316574_0102666 3300035398 Bacteria 1830
189 Ga0316574_0202849 3300035398 Unclassified 1273
190 Ga0316574_0252169 3300035398 Bacteria 1127
191 Ga0316574_0375441 3300035398 Unclassified 897
192 Ga0316574_0421631 3300035398 Bacteria 838
193 Ga0316574_0678859 3300035398 Bacteria 633
194 Ga0316574_0681860 3300035398 Bacteria 631
195 Ga0316574_0872053 3300035398 Bacteria 546
196 Ga0316582_0002399 3300036647 Bacteria 8780
197 Ga0316582_0015267 3300036647 Bacteria 4387
198 Ga0316582_0049553 3300036647 Bacteria 2657
199 Ga0316582_0053913 3300036647 Bacteria 2558
200 Ga0316582_0082046 3300036647 Bacteria 2107
201 Ga0316582_0089591 3300036647 Unclassified 2023
202 Ga0316582_0116250 3300036647 Bacteria 1785
203 Ga0316582_0120548 3300036647 Bacteria 1754
204 Ga0316582_0151334 3300036647 Bacteria 1569
205 Ga0316582_0188833 3300036647 Bacteria 1403
206 Ga0316582_0199580 3300036647 Unclassified 1364
207 Ga0316582_0237935 3300036647 Bacteria 1247
208 Ga0316582_0242474 3300036647 Bacteria 1235
209 Ga0316582_0280502 3300036647 Bacteria 1143
210 Ga0316582_0487339 3300036647 Unclassified 850
211 Ga0316582_0604994 3300036647 Bacteria 754
212 Ga0316582_0654752 3300036647 Unclassified 722
213 Ga0316582_0893071 3300036647 Unclassified 608
214 Ga0316584_0001394 3300036712 Bacteria 14415
215 Ga0316584_0001590 3300036712 Bacteria 13794
216 Ga0316584_0011378 3300036712 Bacteria 6251
217 Ga0316584_0033294 3300036712 Unclassified 3817
218 Ga0316584_0033851 3300036712 Bacteria 3785
219 Ga0316584_0035568 3300036712 Bacteria 3696
220 Ga0316584_0036489 3300036712 Bacteria 3648
221 Ga0316584_0054654 3300036712 Bacteria 2989
222 Ga0316584_0060844 3300036712 Unclassified 2829
223 Ga0316584_0158815 3300036712 Bacteria 1680
224 Ga0316584_0177326 3300036712 Bacteria 1578
225 Ga0316584_0181195 3300036712 Bacteria 1559
226 Ga0316584_0187134 3300036712 Bacteria 1531
227 Ga0316584_0244999 3300036712 Bacteria 1311
228 Ga0316584_0435163 3300036712 Bacteria 930
229 Ga0316584_0459870 3300036712 Bacteria 899
230 Ga0316584_0495997 3300036712 Bacteria 858
231 Ga0316584_0508656 3300036712 Bacteria 845
232 Ga0316581_0016259 3300037588 Bacteria 2135
233 Ga0316581_0035822 3300037588 Bacteria 1505
234 Ga0400484_06398 3300038725 Bacteria 7134
235 Ga0400484_28604 3300038725 Bacteria 19933
236 Ga0400490_04711 3300038726 Bacteria 111545
237 Ga0400490_44572 3300038726 Bacteria 4738
238 Ga0400485_17518 3300038735 Bacteria 18928
239 Ga0400488_34094 3300038741 Bacteria 1174
240 Ga0400488_56377 3300038741 Bacteria 11839
241 Ga0400486_30754 3300038742 Bacteria 36390
242 Ga0400483_080708 3300039062 Bacteria 19705
243 Ga0400483_134698 3300039062 Bacteria 6735
244 Ga0400483_180968 3300039062 Bacteria 20419
245 Ga0400483_205878 3300039062 Bacteria 2247
246 Ga0400483_267815 3300039062 Bacteria 1509
247 Ga0400489_37792 3300039093 Bacteria 26406
248 Ga0400489_82632 3300039093 Bacteria 1745
249 Ga0400489_85973 3300039093 Bacteria 60013
250 Ga0400489_93079 3300039093 Bacteria 18748
251 Ga0400487_24756 3300039110 Bacteria 2389
252 Ga0451577_0004562 3300042876 Bacteria 14573
253 Ga0451577_0017751 3300042876 Bacteria 6565
254 Ga0453684_0003128 3300044712 Bacteria 38115
255 Ga0453684_0015275 3300044712 Bacteria 12173
256 Ga0453684_0049448 3300044712 Bacteria 5545
257 Ga0453684_0344827 3300044712 Bacteria 1681
258 Ga0501310_054266 3300049130 Bacteria 586
259 Ga0501325_057460 3300049541 Bacteria 507
260 2740993826 2740891818 Bacteria 6711283
261 Ga0316586_1022906
262 Ga0316575_10000076
263 Ga0316575_10023091
264 Ga0316575_10078018
265 Ga0316575_10090458
266 Ga0316575_10111581
267 Ga0316575_10127623
268 Ga0316575_10267966
269 Ga0316579_10002818
270 Ga0316579_10006725
271 Ga0316579_10028481
272 Ga0316579_10050721
273 Ga0316579_10056689
274 Ga0316579_10085059
275 Ga0316579_10133572
276 Ga0316579_10185085
277 Ga0316579_10250563
278 Ga0316579_10304455
279 Ga0316579_10395235
280 Ga0316579_10397063
281 Ga0316579_10434797
282 Ga0316576_10000484
283 Ga0316576_10011207
284 Ga0316576_10056334
285 Ga0316576_10061659
286 Ga0316576_10076966
287 Ga0316576_10109624
288 Ga0316576_10112875
289 Ga0316576_10117140
290 Ga0316576_10144241
291 Ga0316576_10161052
292 Ga0316576_10189334
293 Ga0316576_10191487
294 Ga0316576_10193232
295 Ga0316576_10194353
296 Ga0316576_10296374
297 Ga0316576_10409883
298 Ga0316576_10462519
299 Ga0316576_10488610
300 Ga0316576_10563830
301 Ga0316576_10597170
302 Ga0316576_10736921
303 Ga0316576_10870091
304 Ga0316578_10007057
305 Ga0316578_10016661
306 Ga0316578_10032971
307 Ga0316578_10114787
308 Ga0316578_10160322
309 Ga0316578_10168389
310 Ga0316578_10183385
311 Ga0316578_10195958
312 Ga0316578_10272256
313 Ga0316578_10352761
314 Ga0316578_10370303
315 Ga0316578_10529685
316 Ga0316577_10000165
317 Ga0316577_10067668
318 Ga0316577_10072722
319 Ga0316577_10086809
320 Ga0316577_10221595
321 Ga0316577_10292260
322 Ga0316577_10302621
323 Ga0316577_10310063
324 Ga0316577_10396258
325 Ga0316577_10646323
326 Ga0316583_10004740
327 Ga0316583_10005342
328 Ga0316583_10025664
329 Ga0316583_10026975
330 Ga0316583_10043203
331 Ga0316583_10162634
332 Ga0316585_10005887
333 Ga0316585_10011316
334 Ga0316585_10013815
335 Ga0316585_10022774
336 Ga0316585_10022803
337 Ga0316585_10081906
338 Ga0316585_10148684
339 Ga0316580_10000796
340 Ga0316580_10024412
341 Ga0316580_10038478
342 Ga0316580_10099803
343 Ga0316580_10143593
344 Ga0316580_10196359
345 Ga0316580_10208010
346 Ga0316580_10265524
347 Ga0316593_10003782
348 Ga0316593_10008374
349 Ga0316593_10010534
350 Ga0316593_10019838
351 Ga0316593_10031950
352 Ga0316593_10035091
353 Ga0316593_10036500
354 Ga0316593_10039923
355 Ga0316593_10049162
356 Ga0316593_10050164
357 Ga0316593_10052441
358 Ga0316593_10064745
359 Ga0316593_10078905
360 Ga0316593_10083199
361 Ga0316593_10091204
362 Ga0316593_10092644
363 Ga0316593_10122395
364 Ga0316593_10124024
365 Ga0316593_10133906
366 Ga0316593_10136496
367 Ga0316593_10137420
368 Ga0316593_10181971
369 Ga0316593_10186194
370 Ga0316593_10208936
371 Ga0316593_10240321
372 Ga0316593_10258289
373 Ga0316593_10295857
374 Ga0316593_10453472
375 Ga0316592_1006548
376 Ga0316592_1017479
377 Ga0316592_1018192
378 Ga0316592_1020035
379 Ga0316592_1020148
380 Ga0316592_1023618
381 Ga0316592_1024154
382 Ga0316592_1026748
383 Ga0316592_1028922
384 Ga0316592_1031938
385 Ga0316592_1035377
386 Ga0316592_1039641
387 Ga0316592_1047240
388 Ga0316592_1048038
389 Ga0316592_1048480
390 Ga0316592_1051481
391 Ga0316592_1090743
392 Ga0316592_1094864
393 Ga0316592_1096277
394 Ga0316592_1148311
395 Ga0316586_1013192
396 Ga0316586_1014261
397 Ga0316586_1018054
398 Ga0316586_1035473
399 Ga0316588_1006654
400 Ga0316588_1017185
401 Ga0316588_1017277
402 Ga0316588_1039629
403 Ga0316588_1039726
404 Ga0316588_1045638
405 Ga0316588_1045709
406 Ga0316588_1047399
407 Ga0316588_1055800
408 Ga0316588_1103861
409 Ga0316588_1104221
410 Ga0316588_1105387
411 Ga0316588_1194469
412 Ga0316587_1035619
413 Ga0316587_1042082
414 Ga0316587_1059689
415 Ga0316587_1085970
416 Ga0316596_1009748
417 Ga0316596_1011033
418 Ga0316596_1020426
419 Ga0316596_1020514
420 Ga0316596_1022175
421 Ga0316596_1024379
422 Ga0316596_1030909
423 Ga0316596_1032247
424 Ga0316596_1032315
425 Ga0316596_1036323
426 Ga0316596_1038195
427 Ga0316596_1038471
428 Ga0316596_1043129
429 Ga0316596_1049485
430 Ga0316596_1058707
431 Ga0316596_1059532
432 Ga0316596_1068743
433 Ga0316596_1078444
434 Ga0316596_1085421
435 Ga0316596_1096402
436 Ga0316596_1100080
437 Ga0316596_1110476
438 Ga0316596_1135373
439 Ga0316596_1138741
440 Ga0316596_1172350
441 Ga0316596_1173939
442 Ga0316596_1179489
443 Ga0316596_1195520
444 Ga0316596_1211830
445 Ga0316574_0002124
446 Ga0316574_0002576
447 Ga0316574_0049589
448 Ga0316574_0102666
449 Ga0316574_0202849
450 Ga0316574_0252169
451 Ga0316574_0375441
452 Ga0316574_0421631
453 Ga0316574_0678859
454 Ga0316574_0681860
455 Ga0316574_0872053
456 Ga0316582_0002399
457 Ga0316582_0015267
458 Ga0316582_0049553
459 Ga0316582_0053913
460 Ga0316582_0082046
461 Ga0316582_0089591
462 Ga0316582_0116250
463 Ga0316582_0120548
464 Ga0316582_0151334
465 Ga0316582_0188833
466 Ga0316582_0199580
467 Ga0316582_0237935
468 Ga0316582_0242474
469 Ga0316582_0280502
470 Ga0316582_0487339
471 Ga0316582_0604994
472 Ga0316582_0654752
473 Ga0316582_0893071
474 Ga0316584_0001394
475 Ga0316584_0001590
476 Ga0316584_0011378
477 Ga0316584_0033294
478 Ga0316584_0033851
479 Ga0316584_0035568
480 Ga0316584_0036489
481 Ga0316584_0054654
482 Ga0316584_0060844
483 Ga0316584_0158815
484 Ga0316584_0177326
485 Ga0316584_0181195
486 Ga0316584_0187134
487 Ga0316584_0244999
488 Ga0316584_0435163
489 Ga0316584_0459870
490 Ga0316584_0495997
491 Ga0316584_0508656
492 Ga0316581_0016259
493 Ga0316581_0035822
494 Ga0400484_06398
495 Ga0400484_28604
496 Ga0400490_04711
497 Ga0400490_44572
498 Ga0400485_17518
499 Ga0400488_34094
500 Ga0400488_56377
501 Ga0400486_30754
502 Ga0400483_080708
503 Ga0400483_134698
504 Ga0400483_180968
505 Ga0400483_205878
506 Ga0400483_267815
507 Ga0400489_37792
508 Ga0400489_82632
509 Ga0400489_85973
510 Ga0400489_93079
511 Ga0400487_24756
512 Ga0451577_0004562
513 Ga0451577_0017751
514 Ga0453684_0003128
515 Ga0453684_0015275
516 Ga0453684_0049448
517 Ga0453684_0344827
518 Ga0501310_054266
519 Ga0501325_057460
520 2740993826

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01084

Ribosomal_S18

Ribosomal protein S18

36

87

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5zeb-assembly1.cif.gz_r m. smegmatis p/p state 70s ribosome structure 0.8716 25 84
5xyu-assembly1.cif.gz_R small subunit of mycobacterium smegmatis ribosome 0.8683 35 85
7uvz-assembly1.cif.gz_r a. baumannii ribosome-streptothricin-d complex: 70s with e-site trna 0.8658 35 84
7uw1-assembly1.cif.gz_r a. baumannii 70s ribosome-streptothricin-d complex 0.8654 35 84
6yt9-assembly1.cif.gz_s acinetobacter baumannii ribosome-tigecycline complex - 30s subunit body 0.8644 35 85
ID Description Score Start End Superfamily
5xyuR00 Few Secondary Structures;Irregular;30s Ribosomal Protein S18;Ribosomal protein S18 0.8683 35 85 4.10.640.10
2qalR00 Few Secondary Structures;Irregular;30s Ribosomal Protein S18;Ribosomal protein S18 0.8516 34 84 4.10.640.10
5o5jR00 Few Secondary Structures;Irregular;30s Ribosomal Protein S18;Ribosomal protein S18 0.8494 23 85 4.10.640.10
4kj6R00 Few Secondary Structures;Irregular;30s Ribosomal Protein S18;Ribosomal protein S18 0.8467 34 85 4.10.640.10
2aw7R00 Few Secondary Structures;Irregular;30s Ribosomal Protein S18;Ribosomal protein S18 0.8461 34 84 4.10.640.10
ID Description Score Start End GO Terms
AF-A0A2N1RPX5-F1-model_v4 Small ribosomal subunit protein bS18 0.8741 22 85 GO:0003735
GO:0006412
GO:0022627
GO:0070181
AF-A0A3M1CRH1-F1-model_v4 Small ribosomal subunit protein bS18 0.8462 20 87 GO:0003735
GO:0006412
GO:0022627
GO:0070181
AF-A0A2M6WAS4-F1-model_v4 Small ribosomal subunit protein bS18 0.8448 20 85 GO:0003735
GO:0005840
GO:0006412
GO:0070181
GO:1990904
AF-A0A1F8LM17-F1-model_v4 Small ribosomal subunit protein bS18 0.8252 21 85 GO:0003735
GO:0006412
GO:0022627
GO:0070181
AF-F1YL38-F1-model_v4 Small ribosomal subunit protein bS18 0.8239 21 88 GO:0003735
GO:0006412
GO:0022627
GO:0070181

Map