F369292

General Info

Members Datasets Scaffolds Average Seq Length
260 203 520 261

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100001174|Ga0070683_10000117410
Length 292
Sequence MAPVRQEAQLGTVTPWAPVAGHVDAASPSWLERLRVGRWAPPLVVLILALVLWEVVVDLTNTPSYLIAKPTEMFSATANNFHLLMTQMWPTLYEVVLGFACSVAIALPIAIFIVYSRAAGRAVYPLVVASQVVPKVAIAPVFVILLGTGLFPKLILAFLIAFFPIVINTVTGLQGVDPEMLEMVRSMGAGKTRAFAKVRFPAALPSIFAGLKIAMTLAVVGAVVAEFVGASKGLGYSLLVAQGNVDTALVYADLLVMTVMGLVLYAILEIVEAILLRGRRASAAEASSHYSM

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
3 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
4 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
54 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
70 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
71 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
98 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
104 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
105 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
106 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
107 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
108 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
109 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
110 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
111 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
112 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
113 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
114 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
115 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
116 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
121 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
122 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
123 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
124 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
125 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
126 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
127 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
128 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
129 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
130 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
131 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
132 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
133 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
134 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
137 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
138 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
139 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
140 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
141 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
142 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
143 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
144 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
145 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
146 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
147 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
148 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
149 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
150 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
151 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
152 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
153 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
154 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
155 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
158 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
159 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
160 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
161 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
162 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
163 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
164 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
165 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
166 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
167 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
168 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
169 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
170 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
171 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
174 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
175 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
176 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
177 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
178 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
179 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
180 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
181 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
182 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
183 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
184 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
185 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
186 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
187 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
188 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
189 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
190 2738543024 Aminobacter sp. AP02 Isolate Unclassified
191 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
192 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
193 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
194 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
195 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
196 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
197 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
198 2904456579 Variovorax sp. 2002 Isolate Unclassified
199 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
200 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
201 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
202 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
203 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.31
Metatranscriptomes 0
Isolates 7.69

Biome Distribution

Category Percentage (%)
Aerial Root 0.38
Bulb 0
Endosphere 11.92
Nodule 1.92
Rhizoplane 5.38
Rhizosphere 73.08
Stem 0
Stem Tuber 0
Unclassified 3.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100001174 3300005329 Bacteria 19846
2 Ga0055537_1000221 3300003773 Bacteria 41984
3 Ga0055534_1000220 3300003784 Bacteria 41988
4 Ga0055528_1000617 3300003790 Bacteria 26573
5 Ga0065715_10372948 3300005293 Bacteria 918
6 Ga0070683_100027505 3300005329 Bacteria 5129
7 Ga0070680_100152176 3300005336 Bacteria 1942
8 Ga0070682_100535055 3300005337 Unclassified 914
9 Ga0070660_100019028 3300005339 Bacteria 5027
10 Ga0070691_10059484 3300005341 Bacteria 1836
11 Ga0070687_100154580 3300005343 Bacteria 1350
12 Ga0070673_100450197 3300005364 Bacteria 1158
13 Ga0070667_100110596 3300005367 Bacteria 2382
14 Ga0070714_100009839 3300005435 Bacteria 7537
15 Ga0070714_100140139 3300005435 Bacteria 2170
16 Ga0070713_100028512 3300005436 Bacteria 4409
17 Ga0070713_100250244 3300005436 Unclassified 1616
18 Ga0070713_100348216 3300005436 Bacteria 1374
19 Ga0070705_100371929 3300005440 Bacteria 1049
20 Ga0070694_100007461 3300005444 Bacteria 6667
21 Ga0070694_100411586 3300005444 Bacteria 1061
22 Ga0070662_100110845 3300005457 Bacteria 2090
23 Ga0070681_10018900 3300005458 Bacteria 6895
24 Ga0070681_10116625 3300005458 Bacteria 2607
25 Ga0070681_10118253 3300005458 Bacteria 2587
26 Ga0068867_100299081 3300005459 Bacteria 1326
27 Ga0070706_100000025 3300005467 Bacteria 156371
28 Ga0070706_100087006 3300005467 Bacteria 2896
29 Ga0070679_100020665 3300005530 Bacteria 6421
30 Ga0070679_100043112 3300005530 Bacteria 4495
31 Ga0070679_100049046 3300005530 Bacteria 4206
32 Ga0070684_100010530 3300005535 Bacteria 7330
33 Ga0070684_100017276 3300005535 Bacteria 5916
34 Ga0070697_100366628 3300005536 Bacteria 1246
35 Ga0070695_100000529 3300005545 Bacteria 20185
36 Ga0070696_100002467 3300005546 Bacteria 12257
37 Ga0070696_100183229 3300005546 Bacteria 1554
38 Ga0070693_100087545 3300005547 Bacteria 1871
39 Ga0068855_100493123 3300005563 Bacteria 1332
40 Ga0070664_100003851 3300005564 Bacteria 12110
41 Ga0068857_100062199 3300005577 Bacteria 3318
42 Ga0068854_100006278 3300005578 Bacteria 7555
43 Ga0068856_100008575 3300005614 Bacteria 9940
44 Ga0068852_100040719 3300005616 Bacteria 3921
45 Ga0068851_10045019 3300005834 Bacteria 2229
46 Ga0068858_100528280 3300005842 Bacteria 1141
47 Ga0068860_100173278 3300005843 Bacteria 2084
48 Ga0070717_10383319 3300006028 Bacteria 1261
49 Ga0075365_10013473 3300006038 Bacteria 4893
50 Ga0075363_100270628 3300006048 Bacteria 981
51 Ga0070716_100026664 3300006173 Bacteria 3096
52 Ga0070712_100026695 3300006175 Bacteria 3850
53 Ga0075362_10006273 3300006177 Bacteria 4418
54 Ga0075362_10018381 3300006177 Bacteria 2891
55 Ga0075367_10113867 3300006178 Bacteria 1662
56 Ga0075367_10136075 3300006178 Bacteria 1520
57 Ga0075369_10001941 3300006186 Bacteria 7256
58 Ga0075366_10015942 3300006195 Bacteria 4314
59 Ga0075366_10083383 3300006195 Bacteria 1910
60 Ga0075370_10000405 3300006353 Bacteria 15943
61 Ga0075370_10000417 3300006353 Bacteria 15720
62 Ga0068871_100168636 3300006358 Bacteria 1875
63 Ga0075428_100738899 3300006844 Bacteria 1047
64 Ga0075430_100062368 3300006846 Bacteria 3132
65 Ga0075431_100072098 3300006847 Bacteria 3564
66 Ga0075429_100071108 3300006880 Bacteria 3029
67 Ga0075429_100386537 3300006880 Bacteria 1225
68 Ga0068865_100157711 3300006881 Bacteria 1728
69 Ga0075436_100013482 3300006914 Bacteria 5596
70 Ga0099826_10000096 3300006948 Bacteria 41938
71 Ga0099794_10046870 3300007265 Bacteria 2071
72 Ga0105245_10015166 3300009098 Bacteria 6713
73 Ga0114129_10891526 3300009147 Bacteria 1128
74 Ga0105243_10230464 3300009148 Bacteria 1643
75 Ga0105241_10292393 3300009174 Bacteria 1395
76 Ga0105237_10102562 3300009545 Bacteria 2853
77 Ga0105237_10132319 3300009545 Bacteria 2489
78 Ga0105238_10001475 3300009551 Bacteria 23619
79 Ga0105239_10063856 3300010375 Bacteria 4042
80 Ga0105239_10535365 3300010375 Bacteria 1333
81 Ga0157371_10248011 3300013102 Unclassified 1281
82 Ga0157369_10055219 3300013105 Bacteria 4288
83 Ga0157369_10073499 3300013105 Bacteria 3669
84 Ga0157374_10052060 3300013296 Bacteria 3812
85 Ga0157378_10007151 3300013297 Bacteria 9750
86 Ga0157372_10064635 3300013307 Bacteria 4105
87 Ga0182008_10027931 3300014497 Bacteria 2855
88 Ga0157376_10019505 3300014969 Bacteria 5229
89 Ga0182006_1002307 3300015261 Bacteria 10504
90 Ga0182007_10017060 3300015262 Bacteria 2662
91 Ga0209565_1000327 3300025263 Bacteria 42380
92 Ga0209673_1000798 3300025273 Bacteria 41767
93 Ga0209675_1000325 3300025291 Bacteria 42380
94 Ga0207684_10000072 3300025910 Bacteria 185716
95 Ga0207707_10055523 3300025912 Bacteria 3445
96 Ga0207707_10097288 3300025912 Bacteria 2572
97 Ga0207671_10302322 3300025914 Bacteria 1264
98 Ga0207671_10417760 3300025914 Bacteria 1067
99 Ga0207693_10005523 3300025915 Bacteria 10525
100 Ga0207660_10044007 3300025917 Bacteria 3140
101 Ga0207662_10164527 3300025918 Bacteria 1419
102 Ga0207657_10013176 3300025919 Bacteria 8118
103 Ga0207652_10057796 3300025921 Bacteria 3341
104 Ga0207652_10084812 3300025921 Bacteria 2775
105 Ga0207694_10176684 3300025924 Bacteria 1730
106 Ga0207687_10103644 3300025927 Bacteria 2098
107 Ga0207700_10008300 3300025928 Bacteria 6422
108 Ga0207700_10305824 3300025928 Bacteria 1374
109 Ga0207664_10069391 3300025929 Bacteria 2834
110 Ga0207664_10125147 3300025929 Bacteria 2157
111 Ga0207706_10059711 3300025933 Bacteria 3359
112 Ga0207709_10071939 3300025935 Bacteria 2198
113 Ga0207704_10085264 3300025938 Bacteria 2056
114 Ga0207661_10004960 3300025944 Bacteria 9336
115 Ga0207661_10544921 3300025944 Bacteria 1062
116 Ga0207667_10093716 3300025949 Bacteria 3101
117 Ga0207640_10010086 3300025981 Bacteria 5309
118 Ga0207702_10003857 3300026078 Bacteria 13525
119 Ga0207702_10061747 3300026078 Bacteria 3198
120 Ga0207648_10165060 3300026089 Bacteria 1957
121 Ga0207674_10232470 3300026116 Bacteria 1791
122 Ga0209282_1001454 3300027666 Bacteria 13039
123 Ga0307408_100013426 3300031548 Bacteria 5435
124 Ga0307408_100285474 3300031548 Bacteria 1376
125 Ga0307405_10032898 3300031731 Bacteria 3070
126 Ga0307413_10435663 3300031824 Bacteria 1036
127 Ga0307406_10098794 3300031901 Bacteria 1983
128 Ga0307407_10064367 3300031903 Bacteria 2155
129 Ga0307409_100009779 3300031995 Bacteria 5916
130 Ga0307409_100177682 3300031995 Bacteria 1881
131 Ga0307409_100474630 3300031995 Bacteria 1212
132 Ga0307416_100044733 3300032002 Bacteria 3479
133 Ga0307416_100079094 3300032002 Bacteria 2770
134 Ga0307416_100215881 3300032002 Bacteria 1835
135 Ga0307415_100025542 3300032126 Bacteria 3709
136 Ga0373926_0000256 3300035083 Bacteria 12777
137 Ga0373932_0092607 3300035112 Bacteria 972
138 Ga0373936_0000304 3300035113 Bacteria 16506
139 Ga0373939_0039761 3300035114 Bacteria 1409
140 Ga0373941_0004471 3300035115 Bacteria 3234
141 Ga0373945_0041081 3300035116 Bacteria 1671
142 Ga0373943_0000331 3300035170 Bacteria 19768
143 Ga0373946_0008934 3300035171 Bacteria 3683
144 Ga0373961_0052300 3300035241 Bacteria 1216
145 Ga0373931_0013525 3300035691 Bacteria 3975
146 Ga0373931_0023855 3300035691 Bacteria 3092
147 Ga0373935_0003898 3300035692 Bacteria 8704
148 Ga0373935_0009700 3300035692 Bacteria 5763
149 Ga0373935_0290918 3300035692 Bacteria 1152
150 Ga0373927_0005946 3300035695 Bacteria 8355
151 Ga0373947_0023292 3300035725 Bacteria 3600
152 Ga0373947_0169337 3300035725 Bacteria 1416
153 Ga0373947_0188832 3300035725 Bacteria 1344
154 Ga0373925_0011972 3300037068 Bacteria 6278
155 Ga0373925_0128828 3300037068 Bacteria 1971
156 Ga0373925_0183359 3300037068 Bacteria 1658
157 Ga0436364_0618106 3300037853 Bacteria 2370
158 Ga0395901_0848855 3300038443 Bacteria 899
159 Ga0436365_1768363 3300039437 Bacteria 1505
160 Ga0436360_0074407 3300039438 Bacteria 2328
161 Ga0439436_0015986 3300041404 Bacteria 2253
162 Ga0439436_0054860 3300041404 Bacteria 1120
163 Ga0439439_0038646 3300041406 Bacteria 1232
164 Ga0451807_1218838 3300041486 Bacteria 1500
165 Ga0451833_0756354 3300041491 Bacteria 1673
166 Ga0451853_1259610 3300041512 Bacteria 2135
167 Ga0439432_048670 3300042006 Bacteria 1327
168 Ga0439449_0006048 3300042007 Bacteria 4625
169 Ga0439452_031121 3300042010 Bacteria 1311
170 Ga0439462_0001236 3300042015 Bacteria 5601
171 Ga0439446_0064586 3300042156 Bacteria 1111
172 Ga0450893_0044901 3300042532 Bacteria 817
173 Ga0466965_0025366 3300044683 Bacteria 2869
174 Ga0466960_0053300 3300044901 Bacteria 1960
175 Ga0451576_0721567 3300045051 Bacteria 1047
176 Ga0495603_0000417 3300046455 Bacteria 23550
177 Ga0495580_0034029 3300046472 Bacteria 3669
178 Ga0495582_0096304 3300046473 Bacteria 1654
179 Ga0495664_0021048 3300046477 Bacteria 3766
180 Ga0495618_0129181 3300046514 Bacteria 1617
181 Ga0495666_0102636 3300046526 Bacteria 1347
182 Ga0495642_0074517 3300046528 Bacteria 1423
183 Ga0495652_0117116 3300046529 Bacteria 2132
184 Ga0495640_0040972 3300046533 Bacteria 3239
185 Ga0495586_0005953 3300046535 Bacteria 6526
186 Ga0495588_0004518 3300046674 Bacteria 6152
187 Ga0495647_0000318 3300046681 Bacteria 13555
188 Ga0495658_0001664 3300046683 Bacteria 11561
189 Ga0495669_0078827 3300046684 Bacteria 1509
190 Ga0495581_0188735 3300047315 Bacteria 1205
191 Ga0495581_0299603 3300047315 Unclassified 940
192 Ga0495674_0002333 3300047319 Bacteria 18646
193 Ga0495672_0064405 3300047320 Bacteria 2099
194 Ga0495676_0034557 3300047321 Bacteria 4240
195 Ga0495680_0142665 3300047322 Bacteria 1751
196 Ga0496101_0568754 3300048904 Unclassified 896
197 Ga0496102_0092583 3300048905 Bacteria 2799
198 Ga0496102_0299779 3300048905 Unclassified 1515
199 Ga0496103_0208359 3300048906 Bacteria 1257
200 Ga0496106_0013206 3300048909 Bacteria 6094
201 Ga0496107_0038395 3300048910 Bacteria 3435
202 Ga0496110_0051996 3300048913 Bacteria 3601
203 Ga0496110_0231202 3300048913 Bacteria 1682
204 Ga0496115_0000759 3300048918 Bacteria 23773
205 Ga0496115_0189728 3300048918 Bacteria 1698
206 Ga0496117_0000731 3300048920 Bacteria 51549
207 Ga0496125_0000192 3300048928 Bacteria 130383
208 Ga0496125_0000223 3300048928 Bacteria 115921
209 Ga0496125_0005166 3300048928 Bacteria 14682
210 Ga0496125_0013990 3300048928 Bacteria 7846
211 Ga0496126_0011549 3300048929 Bacteria 9123
212 Ga0496126_0028205 3300048929 Bacteria 5352
213 Ga0496126_0152084 3300048929 Bacteria 1983
214 Ga0496126_0266019 3300048929 Unclassified 1424
215 Ga0501067_0071107 3300049583 Bacteria 1927
216 Ga0501072_0243733 3300049588 Bacteria 1432
217 Ga0501073_0013103 3300049589 Bacteria 6046
218 Ga0501249_000099 3300049679 Bacteria 27431
219 nmdc:mga0yw44_18684_c1 3300050492 Bacteria 3804
220 nmdc:mga0k408_450013_c1 3300050493 Bacteria 765
221 nmdc:mga07m45_273_c1 3300050496 Bacteria 20889
222 nmdc:mga07m45_2834_c2 3300050496 Bacteria 6471
223 nmdc:mga05p37_124958_c1 3300050507 Bacteria 3159
224 nmdc:mga05p37_693962_c1 3300050507 Bacteria 1132
225 nmdc:mga09592_359475_c1 3300050508 Bacteria 1260
226 nmdc:mga09592_73526_c1 3300050508 Bacteria 2904
227 nmdc:mga0qj67_154143_c1 3300050509 Bacteria 1864
228 nmdc:mga06r32_147978_c1 3300050510 Unclassified 2326
229 nmdc:mga08x19_5097_c1 3300050514 Bacteria 7769
230 Ga0495601_0000030 3300053077 Bacteria 106632
231 Ga0495619_0000049 3300053085 Bacteria 101868
232 Ga0500562_030461 3300053108 Bacteria 1422
233 Ga0500595_014632 3300053119 Bacteria 2972
234 Ga0500618_000348 3300053125 Bacteria 32595
235 Ga0500618_043850 3300053125 Bacteria 1022
236 Ga0500573_0000978 3300053140 Bacteria 13094
237 Ga0500573_0022581 3300053140 Bacteria 3609
238 Ga0500616_0000106 3300053153 Bacteria 153706
239 Ga0500616_0052625 3300053153 Bacteria 2140
240 Ga0500616_0069317 3300053153 Bacteria 1803
241 2588107198 2585428157 Bacteria 3018951
242 2599621861 2599185214 Bacteria 8209958
243 2599670455 2599185226 Bacteria 8233575
244 2599678945 2599185227 Bacteria 8246414
245 2599691372 2599185229 Bacteria 8216126
246 2738944762 2738541317 Bacteria 5340176
247 2739310806 2738543024 Bacteria 5603683
248 2776268241 2775506902 Bacteria 6208009
249 2776283919 2775506904 Bacteria 5954060
250 2838061839 2838054893 Bacteria 7451788
251 2852679595 2852677369 Bacteria 3768884
252 2858905522 2858902515 Bacteria 7086037
253 2887446158 2887443736 Bacteria 4426037
254 2904455244 2904449895 Bacteria 6927402
255 2904461277 2904456579 Bacteria 6819253
256 2913309383 2913308742 Bacteria 5350706
257 2984582844 2984580707 Bacteria 3351387
258 3005476503 3005474847 Bacteria 9259049
259 8002291313 8002285264 Bacteria 6717907
260 8055035186 8055034563 Bacteria 3562128
261 Ga0070683_100001174
262 Ga0055537_1000221
263 Ga0055534_1000220
264 Ga0055528_1000617
265 Ga0065715_10372948
266 Ga0070683_100027505
267 Ga0070680_100152176
268 Ga0070682_100535055
269 Ga0070660_100019028
270 Ga0070691_10059484
271 Ga0070687_100154580
272 Ga0070673_100450197
273 Ga0070667_100110596
274 Ga0070714_100009839
275 Ga0070714_100140139
276 Ga0070713_100028512
277 Ga0070713_100250244
278 Ga0070713_100348216
279 Ga0070705_100371929
280 Ga0070694_100007461
281 Ga0070694_100411586
282 Ga0070662_100110845
283 Ga0070681_10018900
284 Ga0070681_10116625
285 Ga0070681_10118253
286 Ga0068867_100299081
287 Ga0070706_100000025
288 Ga0070706_100087006
289 Ga0070679_100020665
290 Ga0070679_100043112
291 Ga0070679_100049046
292 Ga0070684_100010530
293 Ga0070684_100017276
294 Ga0070697_100366628
295 Ga0070695_100000529
296 Ga0070696_100002467
297 Ga0070696_100183229
298 Ga0070693_100087545
299 Ga0068855_100493123
300 Ga0070664_100003851
301 Ga0068857_100062199
302 Ga0068854_100006278
303 Ga0068856_100008575
304 Ga0068852_100040719
305 Ga0068851_10045019
306 Ga0068858_100528280
307 Ga0068860_100173278
308 Ga0070717_10383319
309 Ga0075365_10013473
310 Ga0075363_100270628
311 Ga0070716_100026664
312 Ga0070712_100026695
313 Ga0075362_10006273
314 Ga0075362_10018381
315 Ga0075367_10113867
316 Ga0075367_10136075
317 Ga0075369_10001941
318 Ga0075366_10015942
319 Ga0075366_10083383
320 Ga0075370_10000405
321 Ga0075370_10000417
322 Ga0068871_100168636
323 Ga0075428_100738899
324 Ga0075430_100062368
325 Ga0075431_100072098
326 Ga0075429_100071108
327 Ga0075429_100386537
328 Ga0068865_100157711
329 Ga0075436_100013482
330 Ga0099826_10000096
331 Ga0099794_10046870
332 Ga0105245_10015166
333 Ga0114129_10891526
334 Ga0105243_10230464
335 Ga0105241_10292393
336 Ga0105237_10102562
337 Ga0105237_10132319
338 Ga0105238_10001475
339 Ga0105239_10063856
340 Ga0105239_10535365
341 Ga0157371_10248011
342 Ga0157369_10055219
343 Ga0157369_10073499
344 Ga0157374_10052060
345 Ga0157378_10007151
346 Ga0157372_10064635
347 Ga0182008_10027931
348 Ga0157376_10019505
349 Ga0182006_1002307
350 Ga0182007_10017060
351 Ga0209565_1000327
352 Ga0209673_1000798
353 Ga0209675_1000325
354 Ga0207684_10000072
355 Ga0207707_10055523
356 Ga0207707_10097288
357 Ga0207671_10302322
358 Ga0207671_10417760
359 Ga0207693_10005523
360 Ga0207660_10044007
361 Ga0207662_10164527
362 Ga0207657_10013176
363 Ga0207652_10057796
364 Ga0207652_10084812
365 Ga0207694_10176684
366 Ga0207687_10103644
367 Ga0207700_10008300
368 Ga0207700_10305824
369 Ga0207664_10069391
370 Ga0207664_10125147
371 Ga0207706_10059711
372 Ga0207709_10071939
373 Ga0207704_10085264
374 Ga0207661_10004960
375 Ga0207661_10544921
376 Ga0207667_10093716
377 Ga0207640_10010086
378 Ga0207702_10003857
379 Ga0207702_10061747
380 Ga0207648_10165060
381 Ga0207674_10232470
382 Ga0209282_1001454
383 Ga0307408_100013426
384 Ga0307408_100285474
385 Ga0307405_10032898
386 Ga0307413_10435663
387 Ga0307406_10098794
388 Ga0307407_10064367
389 Ga0307409_100009779
390 Ga0307409_100177682
391 Ga0307409_100474630
392 Ga0307416_100044733
393 Ga0307416_100079094
394 Ga0307416_100215881
395 Ga0307415_100025542
396 Ga0373926_0000256
397 Ga0373932_0092607
398 Ga0373936_0000304
399 Ga0373939_0039761
400 Ga0373941_0004471
401 Ga0373945_0041081
402 Ga0373943_0000331
403 Ga0373946_0008934
404 Ga0373961_0052300
405 Ga0373931_0013525
406 Ga0373931_0023855
407 Ga0373935_0003898
408 Ga0373935_0009700
409 Ga0373935_0290918
410 Ga0373927_0005946
411 Ga0373947_0023292
412 Ga0373947_0169337
413 Ga0373947_0188832
414 Ga0373925_0011972
415 Ga0373925_0128828
416 Ga0373925_0183359
417 Ga0436364_0618106
418 Ga0395901_0848855
419 Ga0436365_1768363
420 Ga0436360_0074407
421 Ga0439436_0015986
422 Ga0439436_0054860
423 Ga0439439_0038646
424 Ga0451807_1218838
425 Ga0451833_0756354
426 Ga0451853_1259610
427 Ga0439432_048670
428 Ga0439449_0006048
429 Ga0439452_031121
430 Ga0439462_0001236
431 Ga0439446_0064586
432 Ga0450893_0044901
433 Ga0466965_0025366
434 Ga0466960_0053300
435 Ga0451576_0721567
436 Ga0495603_0000417
437 Ga0495580_0034029
438 Ga0495582_0096304
439 Ga0495664_0021048
440 Ga0495618_0129181
441 Ga0495666_0102636
442 Ga0495642_0074517
443 Ga0495652_0117116
444 Ga0495640_0040972
445 Ga0495586_0005953
446 Ga0495588_0004518
447 Ga0495647_0000318
448 Ga0495658_0001664
449 Ga0495669_0078827
450 Ga0495581_0188735
451 Ga0495581_0299603
452 Ga0495674_0002333
453 Ga0495672_0064405
454 Ga0495676_0034557
455 Ga0495680_0142665
456 Ga0496101_0568754
457 Ga0496102_0092583
458 Ga0496102_0299779
459 Ga0496103_0208359
460 Ga0496106_0013206
461 Ga0496107_0038395
462 Ga0496110_0051996
463 Ga0496110_0231202
464 Ga0496115_0000759
465 Ga0496115_0189728
466 Ga0496117_0000731
467 Ga0496125_0000192
468 Ga0496125_0000223
469 Ga0496125_0005166
470 Ga0496125_0013990
471 Ga0496126_0011549
472 Ga0496126_0028205
473 Ga0496126_0152084
474 Ga0496126_0266019
475 Ga0501067_0071107
476 Ga0501072_0243733
477 Ga0501073_0013103
478 Ga0501249_000099
479 nmdc:mga0yw44_18684_c1
480 nmdc:mga0k408_450013_c1
481 nmdc:mga07m45_273_c1
482 nmdc:mga07m45_2834_c2
483 nmdc:mga05p37_124958_c1
484 nmdc:mga05p37_693962_c1
485 nmdc:mga09592_359475_c1
486 nmdc:mga09592_73526_c1
487 nmdc:mga0qj67_154143_c1
488 nmdc:mga06r32_147978_c1
489 nmdc:mga08x19_5097_c1
490 Ga0495601_0000030
491 Ga0495619_0000049
492 Ga0500562_030461
493 Ga0500595_014632
494 Ga0500618_000348
495 Ga0500618_043850
496 Ga0500573_0000978
497 Ga0500573_0022581
498 Ga0500616_0000106
499 Ga0500616_0052625
500 Ga0500616_0069317
501 2588107198
502 2599621861
503 2599670455
504 2599678945
505 2599691372
506 2738944762
507 2739310806
508 2776268241
509 2776283919
510 2838061839
511 2852679595
512 2858905522
513 2887446158
514 2904455244
515 2904461277
516 2913309383
517 2984582844
518 3005476503
519 8002291313
520 8055035186

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

102

281

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3dhw-assembly1.cif.gz_B crystal structure of methionine importer metni 0.7567 74 245
3dhw-assembly1.cif.gz_A crystal structure of methionine importer metni 0.7396 79 245
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.7372 75 253
7ahd-assembly1.cif.gz_B opua (e190q) occluded 0.7142 36 250
7mc0-assembly1.cif.gz_B inward facing conformation of the metni methionine abc transporter 0.7083 64 258
ID Description Score Start End Superfamily
af_Q2FVG9_10_202_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8945 75 251 1.10.3720.10
af_P14176_140_330_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8872 77 250 1.10.3720.10
af_Q2G1I4_54_251_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8808 80 253 1.10.3720.10
af_P75851_53_247_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8776 80 250 1.10.3720.10
af_Q47539_71_268_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8714 80 253 1.10.3720.10
ID Description Score Start End GO Terms
AF-G7WFR1-F1-model_v4 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 0.937 29 254 GO:0005886
GO:0055085
AF-A0A2E2DT26-F1-model_v4 deleted 0.9356 37 256
AF-A0A7X8BHN6-F1-model_v4 ABC transporter permease 0.9345 34 260 GO:0005886
GO:0055085
AF-H6LG31-F1-model_v4 ABC transport system permease protein 0.9345 26 253 GO:0005886
GO:0055085
AF-A0A6J6UUY1-F1-model_v4 Unannotated protein 0.9338 27 259 GO:0005886
GO:0055085

Map