F368813

General Info

Members Datasets Scaffolds Average Seq Length
259 170 199 307

Family's Representative Sequence

Representative Sequence 3300013105|Ga0157369_10128662|Ga0157369_101286621
Length 330
Sequence MARVLGGFRLNSCVLACCGQNGRMSIPLSGTHFGLTAGDYHATIASVGASLRTLEHRGRPLVVPFDADEVRPAFRGATLAPWPNRVVDGRYVFDGVEQQLALTEPARGHALHGLAAWLDFTAIDRSASSVTLSATIEAQDGYPHRVEVTVAFELDEDGLHTTVTGTNAGPTPAPWGTGPHPYLVAGSGRVDDWTLELPASQVLTVTEDRLIPTGLADVAVEAAGVFDFRTPRAIADTFIDHAFTGLRRGDDGRATVAVRSAEGTGVAMTWDEACAWVQVHTADRDIPELNRLGLAVEPMTCPPDAYNSGTDLIVLAPGESASAGWTIAAL

Samples

Sample ID Description Type Environment
1 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
2 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
3 2643221566 Microbacterium sp. Root166 Isolate Unclassified
4 2643221597 Microbacterium sp. Root180 Isolate Unclassified
5 2643221616 Leifsonia sp. Root227 Isolate Unclassified
6 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
7 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
8 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
9 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
10 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
11 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
12 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
13 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
14 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
15 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
16 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
17 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
18 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
19 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
20 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
21 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
22 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
23 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
24 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
25 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
26 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
27 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
28 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
29 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
30 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
31 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
32 2891562705 Microbispora tritici MT50 Isolate Unclassified
33 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
34 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
35 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
36 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
37 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
38 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
39 2919069694 Microbacterium sp. 1154 Isolate Unclassified
40 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
41 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
42 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
43 2928153084 Leifsonia sp. 563 Isolate Unclassified
44 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
45 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
46 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
47 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
48 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
49 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
50 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
51 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
52 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
53 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
54 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
55 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
56 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
57 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
58 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
59 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
60 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
61 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
62 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
63 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
64 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
65 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
66 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
67 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
68 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
69 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
70 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
71 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
72 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
73 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
74 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
75 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
76 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
77 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
78 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
79 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
80 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
81 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
82 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
83 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
84 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
85 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
91 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
92 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
95 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
101 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
102 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
103 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
104 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
105 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
108 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
109 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
110 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
111 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
112 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
113 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
114 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
115 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
116 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
117 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
118 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
119 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
120 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
121 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
122 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
123 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
135 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
136 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
137 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
138 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
141 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
142 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
143 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
144 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
145 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
164 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
165 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
166 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
167 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
168 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
169 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
170 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.29
Metatranscriptomes 1.54
Isolates 23.17

Biome Distribution

Category Percentage (%)
Aerial Root 0.77
Bulb 0
Endosphere 15.44
Nodule 0
Rhizoplane 8.49
Rhizosphere 47.49
Stem 0
Stem Tuber 0.39
Unclassified 27.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10004919 3300001979 Bacteria 5684
2 JGI25164J39214_1001382 3300002772 Bacteria 5814
3 JGI25165J46597_1000014 3300003214 Bacteria 390383
4 rootH2_10062327 3300003320 Bacteria 4133
5 rootH1_10130532 3300003323 Bacteria 4466
6 Ga0006562J51391_1028236 3300003578 Bacteria 4019
7 Ga0055539_1000006 3300003752 Bacteria 580055
8 Ga0055533_1000002 3300003756 Bacteria 1196393
9 Ga0055525_1000241 3300003759 Bacteria 56036
10 Ga0055527_1000003 3300003760 Bacteria 705001
11 Ga0055542_1000005 3300003762 Bacteria 550280
12 Ga0055529_1000006 3300003763 Bacteria 416978
13 Ga0070710_10090791 3300005437 Bacteria 1801
14 Ga0070685_10027241 3300005466 Bacteria 3157
15 Ga0068856_100068123 3300005614 Bacteria 3518
16 Ga0075365_10070241 3300006038 Bacteria 2355
17 Ga0075365_10078446 3300006038 Bacteria 2233
18 Ga0075365_10086709 3300006038 Bacteria 2128
19 Ga0075367_10007099 3300006178 Bacteria 5713
20 Ga0075369_10094626 3300006186 Bacteria 1335
21 Ga0075370_10050545 3300006353 Bacteria 2358
22 Ga0105245_10192439 3300009098 Bacteria 1954
23 Ga0157370_10506370 3300013104 Bacteria 1109
24 Ga0157369_10000554 3300013105 Bacteria 49088
25 Ga0157369_10128662 3300013105 Bacteria 2684
26 Ga0157375_10344278 3300013308 Bacteria 1656
27 Ga0157380_10214308 3300014326 Bacteria 1718
28 Ga0197907_11370331 3300020069 Bacteria 1098
29 Ga0206354_11048839 3300020081 Bacteria 3621
30 Ga0206353_10967317 3300020082 Bacteria 14439
31 Ga0209566_100032 3300025225 Bacteria 338313
32 Ga0209674_100001 3300025226 Bacteria 4013750
33 Ga0209672_100003 3300025228 Bacteria 1560476
34 Ga0209147_101396 3300025229 Bacteria 8897
35 Ga0209563_100001 3300025230 Bacteria 4013775
36 Ga0207427_101672 3300025231 Bacteria 7427
37 Ga0209437_101369 3300025233 Bacteria 6223
38 Ga0209677_100001 3300025253 Bacteria 4013787
39 Ga0209677_100888 3300025253 Bacteria 14657
40 Ga0209148_1000004 3300025254 Bacteria 1844481
41 Ga0209233_1000014 3300025261 Bacteria 996641
42 Ga0209455_1000091 3300025272 Bacteria 223115
43 Ga0209455_1001348 3300025272 Bacteria 11310
44 Ga0207647_10008814 3300025904 Bacteria 7202
45 Ga0207647_10229250 3300025904 Bacteria 1069
46 Ga0207687_10050159 3300025927 Bacteria 2904
47 Ga0207683_10372586 3300026121 Bacteria 1312
48 Ga0268266_10156842 3300028379 Bacteria 2057
49 Ga0268266_10536636 3300028379 Bacteria 1120
50 Ga0307513_10209112 3300031456 Bacteria 1784
51 Ga0307514_10007455 3300031649 Bacteria 9428
52 Ga0307406_10000350 3300031901 Bacteria 26873
53 Ga0307406_10059508 3300031901 Bacteria 2460
54 Ga0395899_0012467 3300037312 Bacteria 6512
55 Ga0395899_0020674 3300037312 Bacteria 4991
56 Ga0395900_0026232 3300037418 Bacteria 5967
57 Ga0395900_0115662 3300037418 Bacteria 2752
58 Ga0395898_0000194 3300037466 Bacteria 155846
59 Ga0395901_0423930 3300038443 Bacteria 1364
60 Ga0451797_0565364 3300041453 Bacteria 3138
61 Ga0451843_0534032 3300041509 Bacteria 1236
62 Ga0466969_0186452 3300044656 Bacteria 949
63 Ga0466972_0020315 3300044658 Bacteria 3319
64 Ga0466965_0017762 3300044683 Bacteria 3402
65 Ga0466965_0031365 3300044683 Bacteria 2591
66 Ga0466966_0034613 3300044684 Bacteria 3265
67 Ga0466966_0194367 3300044684 Bacteria 1229
68 Ga0466961_0025711 3300044693 Bacteria 3785
69 Ga0466961_0116434 3300044693 Bacteria 1679
70 Ga0466971_0002023 3300044719 Bacteria 8582
71 Ga0466970_0000111 3300044765 Bacteria 36393
72 Ga0466970_0003143 3300044765 Bacteria 8022
73 Ga0466970_0062512 3300044765 Bacteria 1996
74 Ga0466970_0074474 3300044765 Bacteria 1828
75 Ga0466970_0102722 3300044765 Bacteria 1557
76 Ga0466957_0079343 3300044842 Bacteria 2042
77 Ga0466957_0176974 3300044842 Bacteria 1392
78 Ga0466957_0338830 3300044842 Bacteria 1018
79 Ga0466960_0042261 3300044901 Bacteria 2164
80 Ga0466959_0038924 3300045049 Bacteria 3513
81 Ga0466959_0152090 3300045049 Bacteria 1631
82 Ga0466958_0049406 3300045836 Bacteria 2545
83 Ga0466958_0079460 3300045836 Bacteria 2017
84 Ga0495620_0091484 3300046515 Bacteria 1220
85 Ga0495656_0072452 3300046615 Bacteria 1534
86 Ga0495674_0066987 3300047319 Bacteria 3113
87 Ga0496101_0008702 3300048904 Bacteria 6637
88 Ga0496101_0167991 3300048904 Bacteria 1685
89 Ga0496102_0052546 3300048905 Bacteria 3713
90 Ga0496102_0067447 3300048905 Bacteria 3282
91 Ga0496102_0154051 3300048905 Bacteria 2160
92 Ga0496102_0252204 3300048905 Bacteria 1664
93 Ga0496103_0113051 3300048906 Bacteria 1726
94 Ga0496104_0009102 3300048907 Bacteria 8833
95 Ga0496104_0243812 3300048907 Bacteria 1709
96 Ga0496104_0271085 3300048907 Bacteria 1610
97 Ga0496105_0059037 3300048908 Bacteria 3165
98 Ga0496108_0048730 3300048911 Bacteria 3542
99 Ga0496109_0022271 3300048912 Bacteria 5611
100 Ga0496109_0238273 3300048912 Bacteria 1712
101 Ga0496110_0166728 3300048913 Bacteria 1997
102 Ga0496111_0024604 3300048914 Bacteria 4242
103 Ga0496113_0049311 3300048916 Bacteria 3135
104 Ga0496114_0053246 3300048917 Bacteria 3373
105 Ga0496114_0213142 3300048917 Bacteria 1694
106 Ga0496115_0298426 3300048918 Bacteria 1320
107 Ga0496115_0352446 3300048918 Bacteria 1200
108 Ga0496117_0000063 3300048920 Bacteria 254446
109 Ga0496117_0000606 3300048920 Bacteria 58662
110 Ga0496117_0002379 3300048920 Bacteria 23971
111 Ga0496117_0017735 3300048920 Bacteria 5935
112 Ga0496117_0020748 3300048920 Bacteria 5346
113 Ga0496117_0156538 3300048920 Bacteria 1341
114 Ga0496117_0203593 3300048920 Bacteria 1116
115 Ga0496118_0000134 3300048921 Bacteria 130991
116 Ga0496118_0005935 3300048921 Bacteria 13646
117 Ga0496118_0013562 3300048921 Bacteria 7694
118 Ga0496118_0015896 3300048921 Bacteria 6937
119 Ga0496119_0000720 3300048922 Bacteria 44520
120 Ga0496119_0017361 3300048922 Bacteria 5414
121 Ga0496119_0020915 3300048922 Bacteria 4748
122 Ga0496119_0055812 3300048922 Bacteria 2397
123 Ga0496119_0072174 3300048922 Bacteria 2018
124 Ga0496119_0108368 3300048922 Bacteria 1547
125 Ga0496120_0000717 3300048923 Bacteria 48597
126 Ga0496120_0001823 3300048923 Bacteria 23810
127 Ga0496120_0002055 3300048923 Bacteria 21739
128 Ga0496120_0058462 3300048923 Bacteria 2166
129 Ga0496121_0062607 3300048924 Bacteria 3046
130 Ga0496122_0000022 3300048925 Bacteria 388704
131 Ga0496122_0091222 3300048925 Bacteria 2075
132 Ga0496123_0000016 3300048926 Bacteria 424330
133 Ga0496123_0028364 3300048926 Bacteria 4146
134 Ga0496124_0000256 3300048927 Bacteria 102144
135 Ga0496124_0022057 3300048927 Bacteria 5848
136 Ga0496124_0023171 3300048927 Bacteria 5674
137 Ga0496124_0059378 3300048927 Bacteria 3213
138 Ga0496125_0000263 3300048928 Bacteria 108232
139 Ga0496125_0018224 3300048928 Bacteria 6672
140 Ga0496125_0029426 3300048928 Bacteria 4935
141 Ga0496125_0097440 3300048928 Bacteria 2179
142 Ga0496125_0205314 3300048928 Bacteria 1285
143 Ga0496126_0001811 3300048929 Bacteria 31285
144 Ga0496126_0004576 3300048929 Bacteria 16411
145 Ga0496126_0030296 3300048929 Bacteria 5127
146 Ga0501031_0029613 3300049568 Bacteria 3571
147 Ga0501032_0004883 3300049569 Bacteria 10034
148 Ga0501033_0006740 3300049570 Bacteria 8971
149 Ga0501033_0012179 3300049570 Bacteria 6565
150 Ga0501033_0159284 3300049570 Bacteria 1625
151 Ga0501033_0188098 3300049570 Bacteria 1478
152 Ga0501034_0019270 3300049571 Bacteria 6982
153 Ga0501034_0077077 3300049571 Bacteria 3339
154 Ga0501034_0198466 3300049571 Bacteria 1965
155 Ga0501034_0240506 3300049571 Bacteria 1756
156 Ga0501036_0017162 3300049572 Bacteria 6051
157 Ga0501037_0006038 3300049573 Bacteria 8839
158 Ga0501037_0117732 3300049573 Bacteria 1911
159 Ga0501038_0009456 3300049574 Bacteria 8945
160 Ga0501038_0025427 3300049574 Bacteria 5278
161 Ga0501038_0026203 3300049574 Bacteria 5193
162 Ga0501038_0097720 3300049574 Bacteria 2449
163 Ga0501039_0263538 3300049575 Bacteria 1354
164 Ga0501042_0339743 3300049578 Bacteria 1085
165 Ga0501046_0008582 3300049580 Bacteria 8891
166 Ga0501046_0009519 3300049580 Bacteria 8397
167 Ga0501047_0005964 3300049581 Bacteria 11450
168 Ga0501047_0030571 3300049581 Bacteria 5191
169 Ga0501047_0509745 3300049581 Bacteria 1029
170 Ga0501048_0014525 3300049582 Bacteria 5828
171 Ga0501070_0000076 3300049586 Bacteria 83972
172 Ga0501070_0053412 3300049586 Bacteria 3352
173 Ga0501070_0252144 3300049586 Bacteria 1443
174 Ga0501074_0080993 3300049590 Bacteria 2328
175 Ga0501080_0106054 3300049742 Bacteria 2604
176 Ga0501080_0250952 3300049742 Bacteria 1613
177 Ga0501083_0000051 3300049744 Bacteria 85348
178 Ga0501083_0008723 3300049744 Bacteria 7152
179 Ga0501035_0010410 3300049822 Bacteria 8621
180 Ga0501035_0038324 3300049822 Bacteria 4340
181 Ga0501035_0075861 3300049822 Bacteria 2973
182 Ga0501035_0129735 3300049822 Bacteria 2198
183 Ga0501044_0005360 3300049823 Bacteria 14251
184 Ga0501044_0024416 3300049823 Bacteria 6416
185 Ga0501044_0084148 3300049823 Bacteria 3215
186 Ga0501044_0143214 3300049823 Bacteria 2378
187 nmdc:mga00v17_209223_c1 3300050491 Bacteria 1262
188 nmdc:mga00v17_37049_c1 3300050491 Bacteria 1628
189 nmdc:mga0yw44_135992_c1 3300050492 Bacteria 1594
190 nmdc:mga0yw44_90310_c1 3300050492 Bacteria 1935
191 nmdc:mga06z11_55948_c1 3300050494 Bacteria 2039
192 Ga0500635_0000183 3300053080 Bacteria 32119
193 Ga0500559_0038142 3300053136 Bacteria 2085
194 Ga0500559_0079461 3300053136 Bacteria 1489
195 Ga0500573_0000031 3300053140 Bacteria 134098
196 Ga0500573_0038903 3300053140 Bacteria 2748
197 Ga0500573_0059520 3300053140 Bacteria 2189
198 Ga0500573_0098056 3300053140 Bacteria 1651
199 Ga0500573_0140478 3300053140 Bacteria 1330

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031649 Ga0307514_10007455 Ga0307514_100074554 280
2 3300003760 Ga0055527_1000003 Ga0055527_1000003272 281
3 3300003762 Ga0055542_1000005 Ga0055542_1000005136 281
4 3300003763 Ga0055529_1000006 Ga0055529_1000006272 281
5 3300025228 Ga0209672_100003 Ga0209672_1000031110 281
6 3300025229 Ga0209147_101396 Ga0209147_1013964 281
7 3300025254 Ga0209148_1000004 Ga0209148_10000041405 281
8 3300025272 Ga0209455_1000091 Ga0209455_100009176 281
9 iso_pu_bacteria 2856741275 2856748010 281
10 iso_pu_bacteria 2891395885 2891400334 281
11 iso_pu_bacteria 2891554331 2891555385 281
12 iso_pu_bacteria 2891562705 2891569078 281
13 3300049586 Ga0501070_0000076 Ga0501070_0000076_20560_21483 282
14 3300025904 Ga0207647_10008814 Ga0207647_100088143 283
15 3300048904 Ga0496101_0008702 Ga0496101_0008702_4932_5855 283
16 3300048905 Ga0496102_0067447 Ga0496102_0067447_2286_3209 283
17 3300048907 Ga0496104_0243812 Ga0496104_0243812_355_1278 283
18 3300048917 Ga0496114_0053246 Ga0496114_0053246_2167_3090 283
19 3300048924 Ga0496121_0062607 Ga0496121_0062607_1795_2718 283
20 3300053140 Ga0500573_0038903 Ga0500573_0038903_202_1098 284
21 3300053140 Ga0500573_0059520 Ga0500573_0059520_1024_1920 285
22 3300049586 Ga0501070_0053412 Ga0501070_0053412_1861_2757 288
23 3300044719 Ga0466971_0002023 Ga0466971_0002023_2525_3427 290
24 3300031901 Ga0307406_10000350 Ga0307406_1000035018 291
25 3300003320 rootH2_10062327 rootH2_100623272 294
26 3300013308 Ga0157375_10344278 Ga0157375_103442781 294
27 iso_pu_bacteria 2904776348 2904780479 294
28 iso_pu_bacteria 2935409751 2935410008 294
29 3300005437 Ga0070710_10090791 Ga0070710_100907912 296
30 3300044684 Ga0466966_0194367 Ga0466966_0194367_289_1212 296
31 3300044765 Ga0466970_0062512 Ga0466970_0062512_167_1087 296
32 3300045049 Ga0466959_0152090 Ga0466959_0152090_605_1525 296
33 3300048922 Ga0496119_0055812 Ga0496119_0055812_693_1586 296
34 3300048923 Ga0496120_0058462 Ga0496120_0058462_935_1828 296
35 iso_pu_bacteria 2515154155 2515856347 296
36 iso_pu_bacteria 2675903058 2676477387 296
37 iso_pu_bacteria 2721755702 2723640502 296
38 iso_pu_bacteria 2827628540 2827634644 296
39 iso_pu_bacteria 2837268691 2837273676 296
40 iso_pu_bacteria 2964326757 2964327256 296
41 3300044656 Ga0466969_0186452 Ga0466969_0186452_10_912 297
42 3300053136 Ga0500559_0038142 Ga0500559_0038142_531_1427 297
43 3300053136 Ga0500559_0079461 Ga0500559_0079461_63_959 297
44 iso_pu_bacteria 2643221616 2644094554 297
45 iso_pu_bacteria 2821268502 2821271216 297
46 iso_pu_bacteria 2844841374 2844844893 297
47 iso_pu_bacteria 2852677369 2852677528 297
48 iso_pu_bacteria 2870628048 2870631480 297
49 iso_pu_bacteria 2884763398 2884764025 297
50 iso_pu_bacteria 2919055335 2919056850 297
51 iso_pu_bacteria 2919523602 2919526965 297
52 iso_pu_bacteria 2928153084 2928154542 297
53 iso_pu_bacteria 8016254467 8016257150 297
54 3300005466 Ga0070685_10027241 Ga0070685_100272411 298
55 3300009098 Ga0105245_10192439 Ga0105245_101924392 298
56 3300025927 Ga0207687_10050159 Ga0207687_100501592 298
57 3300026121 Ga0207683_10372586 Ga0207683_103725862 298
58 3300028379 Ga0268266_10536636 Ga0268266_105366361 298
59 3300047319 Ga0495674_0066987 Ga0495674_0066987_281_1186 298
60 3300048905 Ga0496102_0052546 Ga0496102_0052546_405_1310 298
61 3300048905 Ga0496102_0154051 Ga0496102_0154051_222_1127 298
62 3300048907 Ga0496104_0009102 Ga0496104_0009102_3476_4381 298
63 3300048908 Ga0496105_0059037 Ga0496105_0059037_277_1182 298
64 3300048911 Ga0496108_0048730 Ga0496108_0048730_358_1263 298
65 3300048912 Ga0496109_0022271 Ga0496109_0022271_654_1559 298
66 3300048912 Ga0496109_0238273 Ga0496109_0238273_650_1555 298
67 3300048913 Ga0496110_0166728 Ga0496110_0166728_405_1310 298
68 3300048914 Ga0496111_0024604 Ga0496111_0024604_2961_3866 298
69 3300048916 Ga0496113_0049311 Ga0496113_0049311_213_1118 298
70 3300048918 Ga0496115_0352446 Ga0496115_0352446_194_1099 298
71 3300053140 Ga0500573_0000031 Ga0500573_0000031_120102_121001 298
72 iso_pu_bacteria 2643221566 2643846723 298
73 iso_pu_bacteria 2643221597 2643996808 298
74 iso_pu_bacteria 2808606306 2808629904 298
75 iso_pu_bacteria 2808606368 2808883787 298
76 iso_pu_bacteria 2808606447 2809228465 298
77 iso_pu_bacteria 2811994872 2812324502 298
78 iso_pu_bacteria 2852632344 2852634150 298
79 3300013105 Ga0157369_10000554 Ga0157369_100005544 299
80 iso_pu_bacteria 2751185788 2753301345 299
81 iso_pu_bacteria 2904430863 2904433434 299
82 iso_pu_bacteria 2919042368 2919044972 299
83 iso_pu_bacteria 2928104781 2928106742 299
84 iso_pu_bacteria 2939660829 2939661316 299
85 iso_pu_bacteria 2939660829 2939662423 299
86 iso_pu_bacteria 2984551494 2984553532 299
87 3300048925 Ga0496122_0091222 Ga0496122_0091222_317_1279 300
88 3300048926 Ga0496123_0028364 Ga0496123_0028364_1913_2875 300
89 iso_pu_bacteria 2844852863 2844853996 300
90 iso_pu_bacteria 8056037122 8056040177 300
91 3300002772 JGI25164J39214_1001382 JGI25164J39214_10013822 301
92 3300003214 JGI25165J46597_1000014 JGI25165J46597_1000014111 301
93 3300003323 rootH1_10130532 rootH1_101305325 301
94 3300003578 Ga0006562J51391_1028236 Ga0006562J51391_10282364 301
95 3300003752 Ga0055539_1000006 Ga0055539_100000652 301
96 3300003756 Ga0055533_1000002 Ga0055533_1000002136 301
97 3300003759 Ga0055525_1000241 Ga0055525_100024152 301
98 3300005614 Ga0068856_100068123 Ga0068856_1000681232 301
99 3300006038 Ga0075365_10070241 Ga0075365_100702412 301
100 3300006038 Ga0075365_10078446 Ga0075365_100784462 301
101 3300006178 Ga0075367_10007099 Ga0075367_100070991 301
102 3300006186 Ga0075369_10094626 Ga0075369_100946262 301
103 3300006353 Ga0075370_10050545 Ga0075370_100505452 301
104 3300013104 Ga0157370_10506370 Ga0157370_105063701 301
105 3300013105 Ga0157369_10128662 Ga0157369_101286621 301
106 3300014326 Ga0157380_10214308 Ga0157380_102143082 301
107 3300020069 Ga0197907_11370331 Ga0197907_113703311 301
108 3300020081 Ga0206354_11048839 Ga0206354_110488392 301
109 3300020082 Ga0206353_10967317 Ga0206353_1096731710 301
110 3300025225 Ga0209566_100032 Ga0209566_100032137 301
111 3300025226 Ga0209674_100001 Ga0209674_1000013428 301
112 3300025230 Ga0209563_100001 Ga0209563_1000013428 301
113 3300025231 Ga0207427_101672 Ga0207427_1016722 301
114 3300025233 Ga0209437_101369 Ga0209437_1013692 301
115 3300025253 Ga0209677_100001 Ga0209677_1000013428 301
116 3300025253 Ga0209677_100888 Ga0209677_10088811 301
117 3300025261 Ga0209233_1000014 Ga0209233_1000014519 301
118 3300025272 Ga0209455_1001348 Ga0209455_10013488 301
119 3300025904 Ga0207647_10229250 Ga0207647_102292501 301
120 3300028379 Ga0268266_10156842 Ga0268266_101568422 301
121 3300037312 Ga0395899_0012467 Ga0395899_0012467_463_1386 301
122 3300037312 Ga0395899_0020674 Ga0395899_0020674_3863_4786 301
123 3300037418 Ga0395900_0115662 Ga0395900_0115662_1438_2361 301
124 3300037466 Ga0395898_0000194 Ga0395898_0000194_59633_60556 301
125 3300041453 Ga0451797_0565364 Ga0451797_0565364_2052_2999 301
126 3300041509 Ga0451843_0534032 Ga0451843_0534032_32_979 301
127 3300044658 Ga0466972_0020315 Ga0466972_0020315_25_948 301
128 3300044683 Ga0466965_0017762 Ga0466965_0017762_1738_2661 301
129 3300044683 Ga0466965_0031365 Ga0466965_0031365_1557_2489 301
130 3300044684 Ga0466966_0034613 Ga0466966_0034613_301_1224 301
131 3300044693 Ga0466961_0025711 Ga0466961_0025711_1905_2828 301
132 3300044693 Ga0466961_0116434 Ga0466961_0116434_512_1435 301
133 3300044765 Ga0466970_0003143 Ga0466970_0003143_3608_4531 301
134 3300044765 Ga0466970_0074474 Ga0466970_0074474_324_1256 301
135 3300044765 Ga0466970_0102722 Ga0466970_0102722_351_1274 301
136 3300044842 Ga0466957_0079343 Ga0466957_0079343_892_1815 301
137 3300044842 Ga0466957_0176974 Ga0466957_0176974_359_1291 301
138 3300044901 Ga0466960_0042261 Ga0466960_0042261_261_1184 301
139 3300045049 Ga0466959_0038924 Ga0466959_0038924_1959_2882 301
140 3300045836 Ga0466958_0079460 Ga0466958_0079460_984_1916 301
141 3300046515 Ga0495620_0091484 Ga0495620_0091484_207_1151 301
142 3300046615 Ga0495656_0072452 Ga0495656_0072452_262_1206 301
143 3300048904 Ga0496101_0167991 Ga0496101_0167991_188_1150 301
144 3300048905 Ga0496102_0252204 Ga0496102_0252204_142_1065 301
145 3300048906 Ga0496103_0113051 Ga0496103_0113051_436_1398 301
146 3300048907 Ga0496104_0271085 Ga0496104_0271085_359_1321 301
147 3300048917 Ga0496114_0213142 Ga0496114_0213142_664_1626 301
148 3300048918 Ga0496115_0298426 Ga0496115_0298426_277_1239 301
149 3300048920 Ga0496117_0000063 Ga0496117_0000063_207716_208681 301
150 3300048920 Ga0496117_0002379 Ga0496117_0002379_5016_5978 301
151 3300048920 Ga0496117_0017735 Ga0496117_0017735_3769_4695 301
152 3300048920 Ga0496117_0020748 Ga0496117_0020748_142_1065 301
153 3300048920 Ga0496117_0156538 Ga0496117_0156538_266_1189 301
154 3300048921 Ga0496118_0000134 Ga0496118_0000134_48922_49884 301
155 3300048921 Ga0496118_0005935 Ga0496118_0005935_1769_2695 301
156 3300048921 Ga0496118_0015896 Ga0496118_0015896_3190_4134 301
157 3300048922 Ga0496119_0000720 Ga0496119_0000720_974_1918 301
158 3300048922 Ga0496119_0017361 Ga0496119_0017361_3511_4476 301
159 3300048922 Ga0496119_0020915 Ga0496119_0020915_2706_3671 301
160 3300048922 Ga0496119_0072174 Ga0496119_0072174_853_1776 301
161 3300048923 Ga0496120_0000717 Ga0496120_0000717_19092_20057 301
162 3300048923 Ga0496120_0001823 Ga0496120_0001823_15018_15962 301
163 3300048923 Ga0496120_0002055 Ga0496120_0002055_2742_3707 301
164 3300048925 Ga0496122_0000022 Ga0496122_0000022_226633_227577 301
165 3300048926 Ga0496123_0000016 Ga0496123_0000016_262116_263060 301
166 3300048927 Ga0496124_0000256 Ga0496124_0000256_58274_59299 301
167 3300048927 Ga0496124_0022057 Ga0496124_0022057_781_1704 301
168 3300048927 Ga0496124_0023171 Ga0496124_0023171_414_1337 301
169 3300048927 Ga0496124_0059378 Ga0496124_0059378_429_1394 301
170 3300048928 Ga0496125_0000263 Ga0496125_0000263_81575_82525 301
171 3300048928 Ga0496125_0018224 Ga0496125_0018224_5014_5958 301
172 3300048928 Ga0496125_0029426 Ga0496125_0029426_3451_4416 301
173 3300048928 Ga0496125_0205314 Ga0496125_0205314_143_1108 301
174 3300048929 Ga0496126_0001811 Ga0496126_0001811_7017_7982 301
175 3300048929 Ga0496126_0030296 Ga0496126_0030296_434_1378 301
176 3300049568 Ga0501031_0029613 Ga0501031_0029613_777_1700 301
177 3300049569 Ga0501032_0004883 Ga0501032_0004883_6051_6974 301
178 3300049570 Ga0501033_0006740 Ga0501033_0006740_6110_7033 301
179 3300049570 Ga0501033_0012179 Ga0501033_0012179_4858_5781 301
180 3300049570 Ga0501033_0159284 Ga0501033_0159284_604_1527 301
181 3300049571 Ga0501034_0019270 Ga0501034_0019270_3611_4534 301
182 3300049571 Ga0501034_0077077 Ga0501034_0077077_1360_2283 301
183 3300049571 Ga0501034_0198466 Ga0501034_0198466_547_1476 301
184 3300049571 Ga0501034_0240506 Ga0501034_0240506_256_1179 301
185 3300049572 Ga0501036_0017162 Ga0501036_0017162_3209_4132 301
186 3300049573 Ga0501037_0006038 Ga0501037_0006038_256_1179 301
187 3300049573 Ga0501037_0117732 Ga0501037_0117732_733_1656 301
188 3300049574 Ga0501038_0009456 Ga0501038_0009456_254_1177 301
189 3300049574 Ga0501038_0097720 Ga0501038_0097720_336_1259 301
190 3300049575 Ga0501039_0263538 Ga0501039_0263538_236_1159 301
191 3300049578 Ga0501042_0339743 Ga0501042_0339743_64_987 301
192 3300049580 Ga0501046_0008582 Ga0501046_0008582_5313_6236 301
193 3300049580 Ga0501046_0009519 Ga0501046_0009519_4689_5612 301
194 3300049581 Ga0501047_0005964 Ga0501047_0005964_3923_4846 301
195 3300049581 Ga0501047_0030571 Ga0501047_0030571_3510_4433 301
196 3300049581 Ga0501047_0509745 Ga0501047_0509745_42_971 301
197 3300049582 Ga0501048_0014525 Ga0501048_0014525_4622_5545 301
198 3300049586 Ga0501070_0252144 Ga0501070_0252144_440_1363 301
199 3300049590 Ga0501074_0080993 Ga0501074_0080993_98_1021 301
200 3300049742 Ga0501080_0106054 Ga0501080_0106054_497_1420 301
201 3300049742 Ga0501080_0250952 Ga0501080_0250952_228_1151 301
202 3300049744 Ga0501083_0000051 Ga0501083_0000051_71963_72886 301
203 3300049822 Ga0501035_0010410 Ga0501035_0010410_1094_2017 301
204 3300049822 Ga0501035_0038324 Ga0501035_0038324_827_1756 301
205 3300049822 Ga0501035_0075861 Ga0501035_0075861_172_1095 301
206 3300049822 Ga0501035_0129735 Ga0501035_0129735_497_1420 301
207 3300049823 Ga0501044_0005360 Ga0501044_0005360_11427_12350 301
208 3300049823 Ga0501044_0024416 Ga0501044_0024416_4556_5479 301
209 3300049823 Ga0501044_0084148 Ga0501044_0084148_1137_2066 301
210 3300049823 Ga0501044_0143214 Ga0501044_0143214_1118_2062 301
211 3300050491 nmdc:mga00v17_37049_c1 nmdc:mga00v17_37049_c1_443_1387 301
212 3300050492 nmdc:mga0yw44_90310_c1 nmdc:mga0yw44_90310_c1_713_1657 301
213 3300050494 nmdc:mga06z11_55948_c1 nmdc:mga06z11_55948_c1_989_1933 301
214 3300053080 Ga0500635_0000183 Ga0500635_0000183_795_1718 301
215 3300053140 Ga0500573_0098056 Ga0500573_0098056_537_1460 301
216 iso_pu_bacteria 2643221542 2643732740 301
217 iso_pu_bacteria 2757320536 2758226532 301
218 iso_pu_bacteria 2773857758 2774379981 301
219 iso_pu_bacteria 2862993130 2862994984 301
220 iso_pu_bacteria 2904509784 2904511589 301
221 iso_pu_bacteria 2908678064 2908680521 301
222 iso_pu_bacteria 2919069694 2919071923 301
223 iso_pu_bacteria 2928121344 2928123718 301
224 iso_pu_bacteria 2974294766 2974297585 301
225 iso_pu_bacteria 2974324384 2974326179 301
226 iso_pu_bacteria 2977228692 2977231821 301
227 iso_pu_bacteria 2977236895 2977237179 301
228 iso_pu_bacteria 2977264416 2977267131 301
229 iso_pu_bacteria 2984542743 2984545032 301
230 3300006038 Ga0075365_10086709 Ga0075365_100867093 302
231 3300031456 Ga0307513_10209112 Ga0307513_102091123 302
232 3300049570 Ga0501033_0188098 Ga0501033_0188098_327_1262 302
233 3300049744 Ga0501083_0008723 Ga0501083_0008723_4419_5345 302
234 3300050492 nmdc:mga0yw44_135992_c1 nmdc:mga0yw44_135992_c1_102_1019 302
235 3300053140 Ga0500573_0140478 Ga0500573_0140478_28_975 302
236 iso_pu_bacteria 2857723135 2857726940 302
237 3300037418 Ga0395900_0026232 Ga0395900_0026232_4778_5716 303
238 3300038443 Ga0395901_0423930 Ga0395901_0423930_313_1251 303
239 3300048920 Ga0496117_0000606 Ga0496117_0000606_21824_22738 303
240 3300048920 Ga0496117_0203593 Ga0496117_0203593_81_995 303
241 3300048921 Ga0496118_0013562 Ga0496118_0013562_1881_2795 303
242 3300048929 Ga0496126_0004576 Ga0496126_0004576_1370_2284 303
243 3300049574 Ga0501038_0025427 Ga0501038_0025427_2049_2966 303
244 3300050491 nmdc:mga00v17_209223_c1 nmdc:mga00v17_209223_c1_118_1032 303
245 iso_pu_bacteria 2945968032 2945969107 303
246 3300048922 Ga0496119_0108368 Ga0496119_0108368_159_1076 304
247 3300048928 Ga0496125_0097440 Ga0496125_0097440_993_1916 304
248 iso_pu_bacteria 2643221724 2644681621 304
249 iso_pu_bacteria 2747842429 2747954847 304
250 iso_pu_bacteria 2852646457 2852647834 304
251 3300045836 Ga0466958_0049406 Ga0466958_0049406_80_1030 307
252 3300049574 Ga0501038_0026203 Ga0501038_0026203_1616_2548 307
253 iso_pu_bacteria 2946041624 2946045533 307
254 3300044765 Ga0466970_0000111 Ga0466970_0000111_144_1079 308
255 3300044842 Ga0466957_0338830 Ga0466957_0338830_43_978 308
256 iso_pu_bacteria 2946080515 2946083729 308
257 3300031901 Ga0307406_10059508 Ga0307406_100595082 311
258 iso_pu_bacteria 2946033335 2946036154 311
259 3300001979 JGI24740J21852_10004919 JGI24740J21852_100049192 318

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01263

Aldose_epim

Aldose 1-epimerase

32

328

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nre-assembly4.cif.gz_D crystal structure of a putative aldose 1-epimerase (b2544) from escherichia coli k12 at 1.59 a resolution 0.8902 8 318
3nre-assembly4.cif.gz_D crystal structure of a putative aldose 1-epimerase (b2544) from escherichia coli k12 at 1.59 a resolution 0.8757 8 318
1lur-assembly2.cif.gz_B crystal structure of the galm/aldose epimerase homologue from c. elegans, northeast structural genomics target wr66 0.8445 8 318
4rnl-assembly1.cif.gz_A the crystal structure of a possible galactose mutarotase from streptomyces platensis subsp. rosaceus 0.8305 15 318
1lur-assembly2.cif.gz_B crystal structure of the galm/aldose epimerase homologue from c. elegans, northeast structural genomics target wr66 0.8243 8 318
ID Description Score Start End Superfamily
af_P32139_19_304_2.70.98.10 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.9597 8 316 2.70.98.10
af_P32139_19_304_2.70.98.10 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.9564 8 316 2.70.98.10
af_P76584_1_290_2.70.98.10 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.8769 8 318 2.70.98.10
af_P76584_1_290_2.70.98.10 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.8655 8 318 2.70.98.10
af_A4IAZ4_13_369_2.70.98.10 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.8423 8 318 2.70.98.10
ID Description Score Start End GO Terms
AF-A0A3R7E7F2-F1-model_v4 deleted 0.9919 3 318
AF-A0A653S7L7-F1-model_v4 Galactose-1-epimerase 0.9911 1 318 GO:0004034
GO:0006006
GO:0030246
GO:0033499
AF-A0A3R7E7F2-F1-model_v4 deleted 0.9854 3 318
AF-A0A349CWZ8-F1-model_v4 Galactose mutarotase 0.985 1 133 GO:0005975
GO:0016853
GO:0030246
AF-A0A4R8UPK1-F1-model_v4 deleted 0.9844 4 317

Feature Viewer

pLDDT pTM Quality
93.94 0.92 High
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Predicted Structure (AlphaFold2)

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