F368708

General Info

Members Datasets Scaffolds Average Seq Length
259 165 514 598

Family's Representative Sequence

Representative Sequence 3300006042|Ga0075368_10000134|Ga0075368_1000013411
Length 625
Sequence MRGTKATPAGGRPFAQGQNREHFVNRRQFLTTSGATALAASAPRAFAQPGSQDARLRAMLDGFFYERLDDSPEQATRLGLDTGARAALRGKLSDTSAAGAARDLARTKTQAKQLAGLDRAALSPASQLDYDVVAYQLDRAVGGERFAYGETAGRYAPYILSQLTGSYRETPDFLDSQHRVKDAADADAYLARLEAFPVSMDGELERQKADAAKGVFAPDYILDTTMKMQAALRDQPAAQTVLVASFAKKLAAAGLSPERAAQAEKIVAEKVFPAVDRQRALVQQLRAKAVHDAGCWRLPDGEAFYAAAAEAATTTRLTGDEIHQMGLDQVASISSRIDAILKGEGMSQGTVGDRLVALNKRPDQLYPNTDPGREALLAQLNSQIKAMQARLGEAFNTVPKAPVEVRRVPVTIQAGAPGGYYQNASLDGSRPAIYFINLRDTFDRPKFGLATLTHHEAVPGHHLQVTVALESDSIPMIRRRGFYSGYSEGWALYSEQLADEMGMYKGDPLGQVGYLQSLLFRATRLVVDSGMHAKRWSREKATDYLIATTGIARGRSQGEIDRYTVWPGQACSYKIGHTVWNDLREQVKTAQGDKFDLKQFHEVLTLGAMPLDILKQAVRQRAGIA

Samples

Sample ID Description Type Environment
1 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
5 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
39 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
40 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
43 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
68 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
72 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
77 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
78 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
87 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
88 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
89 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
90 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
91 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
92 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
93 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
94 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
95 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
96 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
97 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
98 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
99 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
100 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
101 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
102 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
103 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
104 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
105 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
106 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
107 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
108 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
109 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
110 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
113 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
114 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
115 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
121 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
122 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
123 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
124 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
125 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
126 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
127 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
128 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
129 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
130 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
131 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
132 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
133 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
134 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
135 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
136 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
137 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
138 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
139 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
140 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
141 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
142 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
143 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
144 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
145 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
146 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
147 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
148 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
149 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
150 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
151 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
152 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
153 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
154 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
155 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
156 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
157 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
158 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
159 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
160 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
161 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
162 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
163 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
164 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
165 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.03
Metatranscriptomes 0.39
Isolates 11.58

Biome Distribution

Category Percentage (%)
Aerial Root 0.77
Bulb 0
Endosphere 20.08
Nodule 0
Rhizoplane 1.54
Rhizosphere 69.5
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075368_10000134 3300006042 Bacteria 19630
2 JGI24739J22299_10004294 3300001989 Bacteria 5464
3 JGI24737J22298_10001084 3300001990 Bacteria 9564
4 Ga0055536_1001041 3300003781 Bacteria 17535
5 Ga0055530_10000413 3300003791 Bacteria 38081
6 Ga0055531_10008369 3300003794 Bacteria 5470
7 Ga0065165_1000041 3300005262 Bacteria 203876
8 Ga0065165_1004128 3300005262 Bacteria 9333
9 Ga0065165_1008880 3300005262 Bacteria 4611
10 Ga0065165_1013455 3300005262 Bacteria 3250
11 Ga0070658_10000001 3300005327 Bacteria 856789
12 Ga0070658_10000082 3300005327 Bacteria 89656
13 Ga0070670_100047329 3300005331 Bacteria 3700
14 Ga0070660_100000177 3300005339 Bacteria 42137
15 Ga0070660_100000368 3300005339 Bacteria 30078
16 Ga0070660_100002098 3300005339 Bacteria 13750
17 Ga0070661_100000010 3300005344 Bacteria 175777
18 Ga0070668_100002089 3300005347 Bacteria 14612
19 Ga0070675_100027771 3300005354 Bacteria 4550
20 Ga0070671_100008820 3300005355 Bacteria 8090
21 Ga0070659_100000058 3300005366 Bacteria 88306
22 Ga0070659_100014002 3300005366 Bacteria 5986
23 Ga0070659_100038903 3300005366 Bacteria 3711
24 Ga0070667_100007933 3300005367 Bacteria 8805
25 Ga0070685_10001478 3300005466 Bacteria 12376
26 Ga0070686_100000123 3300005544 Bacteria 55299
27 Ga0070665_100000011 3300005548 Bacteria 525539
28 Ga0070665_100080163 3300005548 Bacteria 3270
29 Ga0068855_100096101 3300005563 Bacteria 3415
30 Ga0068857_100008933 3300005577 Bacteria 8681
31 Ga0068859_100102506 3300005617 Bacteria 2919
32 Ga0068863_100025055 3300005841 Bacteria 5689
33 Ga0068860_100003204 3300005843 Bacteria 16891
34 Ga0068860_100031143 3300005843 Bacteria 5128
35 Ga0068862_100000370 3300005844 Bacteria 48894
36 Ga0075368_10000252 3300006042 Bacteria 15267
37 Ga0075367_10000054 3300006178 Bacteria 27401
38 Ga0075370_10006098 3300006353 Bacteria 6045
39 Ga0068865_100000543 3300006881 Bacteria 20949
40 Ga0097620_100102504 3300006931 Bacteria 2919
41 Ga0105240_10009089 3300009093 Bacteria 14108
42 Ga0105245_10072769 3300009098 Bacteria 3123
43 Ga0105248_10001438 3300009177 Bacteria 26535
44 Ga0105248_10073131 3300009177 Bacteria 3853
45 Ga0105238_10006801 3300009551 Bacteria 11421
46 Ga0105238_10036744 3300009551 Bacteria 4980
47 Ga0105249_10000043 3300009553 Bacteria 192155
48 Ga0157369_10010471 3300013105 Bacteria 10562
49 Ga0163162_10013953 3300013306 Bacteria 7852
50 Ga0163162_10036961 3300013306 Bacteria 4871
51 Ga0206356_10798647 3300020070 Bacteria 3184
52 Ga0213873_10000006 3300021358 Bacteria 408723
53 Ga0213876_10000004 3300021384 Bacteria 943822
54 Ga0213876_10002175 3300021384 Bacteria 11579
55 Ga0213876_10002835 3300021384 Bacteria 10079
56 Ga0209147_100491 3300025229 Bacteria 23505
57 Ga0209147_101368 3300025229 Bacteria 9090
58 Ga0209676_1000082 3300025292 Bacteria 280400
59 Ga0209676_1001822 3300025292 Bacteria 17696
60 Ga0209758_1000541 3300025297 Bacteria 59943
61 Ga0209050_1000034 3300025298 Bacteria 433906
62 Ga0209050_1007758 3300025298 Bacteria 5917
63 Ga0209257_1000052 3300025304 Bacteria 430947
64 Ga0209257_1000218 3300025304 Bacteria 135855
65 Ga0209257_1002328 3300025304 Bacteria 19160
66 Ga0207710_10015227 3300025900 Bacteria 3248
67 Ga0207647_10019602 3300025904 Bacteria 4547
68 Ga0207705_10000002 3300025909 Bacteria 2046852
69 Ga0207705_10000256 3300025909 Bacteria 51644
70 Ga0207695_10002860 3300025913 Bacteria 25097
71 Ga0207657_10000082 3300025919 Bacteria 89667
72 Ga0207657_10001962 3300025919 Bacteria 22200
73 Ga0207657_10005009 3300025919 Bacteria 13911
74 Ga0207649_10000165 3300025920 Bacteria 54047
75 Ga0207681_10083023 3300025923 Bacteria 2266
76 Ga0207694_10026261 3300025924 Bacteria 4428
77 Ga0207659_10006231 3300025926 Bacteria 7295
78 Ga0207687_10059211 3300025927 Bacteria 2697
79 Ga0207690_10000070 3300025932 Bacteria 88786
80 Ga0207690_10002558 3300025932 Bacteria 10995
81 Ga0207690_10008820 3300025932 Bacteria 5986
82 Ga0207690_10014878 3300025932 Bacteria 4709
83 Ga0207690_10026118 3300025932 Bacteria 3676
84 Ga0207706_10014749 3300025933 Bacteria 7075
85 Ga0207706_10029021 3300025933 Bacteria 4939
86 Ga0207704_10001969 3300025938 Bacteria 9208
87 Ga0207711_10003166 3300025941 Bacteria 14349
88 Ga0207711_10013627 3300025941 Bacteria 6755
89 Ga0207667_10034188 3300025949 Bacteria 5461
90 Ga0207712_10000095 3300025961 Bacteria 102251
91 Ga0207668_10001196 3300025972 Bacteria 15423
92 Ga0207703_10060270 3300026035 Bacteria 3103
93 Ga0207641_10008795 3300026088 Bacteria 8341
94 Ga0207641_10047399 3300026088 Bacteria 3624
95 Ga0207648_10018282 3300026089 Bacteria 6350
96 Ga0207676_10010521 3300026095 Bacteria 6591
97 Ga0207674_10003133 3300026116 Bacteria 20386
98 Ga0209813_10000026 3300027866 Bacteria 71626
99 Ga0209813_10000063 3300027866 Bacteria 43741
100 Ga0268266_10000058 3300028379 Bacteria 277346
101 Ga0268266_10031609 3300028379 Bacteria 4496
102 Ga0268265_10000189 3300028380 Bacteria 73017
103 Ga0268264_10000657 3300028381 Bacteria 40628
104 Ga0265332_10019052 3300031238 Bacteria 3029
105 Ga0265339_10014169 3300031249 Bacteria 4811
106 Ga0265316_10051762 3300031344 Bacteria 3224
107 Ga0265314_10003107 3300031711 Bacteria 16338
108 Ga0265314_10050740 3300031711 Bacteria 2894
109 Ga0307406_10000923 3300031901 Bacteria 16440
110 Ga0307414_10016256 3300032004 Bacteria 4519
111 Ga0307510_10031573 3300033180 Bacteria 5981
112 Ga0373927_0000100 3300035695 Bacteria 64984
113 Ga0373925_0000636 3300037068 Bacteria 33115
114 Ga0395899_0000197 3300037312 Bacteria 88596
115 Ga0395900_0000006 3300037418 Bacteria 495364
116 Ga0395905_0008294 3300037471 Bacteria 10253
117 Ga0395905_0023326 3300037471 Bacteria 5850
118 Ga0395905_0073132 3300037471 Bacteria 3213
119 Ga0395905_0110992 3300037471 Bacteria 2575
120 Ga0395901_0000001 3300038443 Bacteria 800383
121 Ga0395901_0015867 3300038443 Bacteria 7677
122 Ga0237816_00540 3300039145 Bacteria 3190
123 Ga0436365_0668445 3300039437 Bacteria 24471
124 Ga0436365_1215130 3300039437 Bacteria 80243
125 Ga0436362_0094317 3300039453 Bacteria 79076
126 Ga0439458_0001026 3300042157 Bacteria 7128
127 Ga0439458_0001805 3300042157 Bacteria 5325
128 Ga0466965_0014073 3300044683 Bacteria 3784
129 Ga0451576_0160564 3300045051 Bacteria 2345
130 Ga0495627_000156 3300046453 Bacteria 78784
131 Ga0495627_000193 3300046453 Bacteria 67253
132 Ga0495627_000478 3300046453 Bacteria 33914
133 Ga0495627_000578 3300046453 Bacteria 29484
134 Ga0495638_0045538 3300046460 Bacteria 2759
135 Ga0495638_0049585 3300046460 Bacteria 2625
136 Ga0495583_0000023 3300046506 Bacteria 280019
137 Ga0495583_0000840 3300046506 Bacteria 37393
138 Ga0495583_0003453 3300046506 Bacteria 12009
139 Ga0495606_0003584 3300046507 Bacteria 16361
140 Ga0495610_0000291 3300046512 Bacteria 52599
141 Ga0495610_0001092 3300046512 Bacteria 24761
142 Ga0495610_0031766 3300046512 Bacteria 2751
143 Ga0495632_0000006 3300046519 Bacteria 345883
144 Ga0495632_0000042 3300046519 Bacteria 145186
145 Ga0495632_0042955 3300046519 Bacteria 2263
146 Ga0495637_0000626 3300046520 Bacteria 24967
147 Ga0495637_0000784 3300046520 Bacteria 21358
148 Ga0495643_0000005 3300046522 Bacteria 443135
149 Ga0495643_0000021 3300046522 Bacteria 293465
150 Ga0495648_0010683 3300046524 Bacteria 6974
151 Ga0495663_0000008 3300046525 Bacteria 260614
152 Ga0495663_0000015 3300046525 Bacteria 145185
153 Ga0495633_0000190 3300046558 Bacteria 79967
154 Ga0495633_0000197 3300046558 Bacteria 76903
155 Ga0495633_0000262 3300046558 Bacteria 62524
156 Ga0495633_0002635 3300046558 Bacteria 12531
157 Ga0495633_0026304 3300046558 Bacteria 2856
158 Ga0495668_0015238 3300046616 Bacteria 4492
159 Ga0495625_0000240 3300046660 Bacteria 85840
160 Ga0495625_0000263 3300046660 Bacteria 81813
161 Ga0495625_0003788 3300046660 Bacteria 14662
162 Ga0495625_0007915 3300046660 Bacteria 9143
163 Ga0495625_0029616 3300046660 Bacteria 4091
164 Ga0495661_0071132 3300046665 Bacteria 2034
165 Ga0495613_0002661 3300046689 Bacteria 13410
166 Ga0495671_0000007 3300046692 Bacteria 443069
167 Ga0495671_0000017 3300046692 Bacteria 293465
168 Ga0495649_0001230 3300046694 Bacteria 19725
169 Ga0495677_0009823 3300047445 Bacteria 3526
170 Ga0495681_0000032 3300047470 Bacteria 127415
171 Ga0495681_0000098 3300047470 Bacteria 75809
172 Ga0495681_0021398 3300047470 Bacteria 3487
173 Ga0495686_0000007 3300047472 Bacteria 732622
174 Ga0495686_0003444 3300047472 Bacteria 13716
175 Ga0495686_0008091 3300047472 Bacteria 7779
176 Ga0496102_0084851 3300048905 Bacteria 2924
177 Ga0496109_0034500 3300048912 Bacteria 4557
178 Ga0496115_0000414 3300048918 Bacteria 34790
179 Ga0496115_0032677 3300048918 Bacteria 4106
180 Ga0496121_0058246 3300048924 Bacteria 3195
181 Ga0496123_0012290 3300048926 Bacteria 7316
182 Ga0496123_0067572 3300048926 Bacteria 2257
183 Ga0496125_0000771 3300048928 Bacteria 52335
184 Ga0501032_0002300 3300049569 Bacteria 14995
185 Ga0501034_0104894 3300049571 Bacteria 2820
186 Ga0501037_0056205 3300049573 Bacteria 2875
187 Ga0501047_0000490 3300049581 Bacteria 43118
188 Ga0501047_0002639 3300049581 Bacteria 17063
189 Ga0501067_0000802 3300049583 Bacteria 16920
190 Ga0501067_0009356 3300049583 Bacteria 5429
191 Ga0501068_0001057 3300049584 Bacteria 14590
192 Ga0501068_0016127 3300049584 Bacteria 4303
193 Ga0501073_0000092 3300049589 Bacteria 56936
194 Ga0501073_0023525 3300049589 Bacteria 4423
195 Ga0501077_0001973 3300049593 Bacteria 12403
196 Ga0501249_000049 3300049679 Bacteria 50472
197 Ga0501080_0002609 3300049742 Bacteria 15782
198 Ga0501080_0003917 3300049742 Bacteria 13187
199 Ga0501044_0035647 3300049823 Bacteria 5209
200 nmdc:mga06z11_19_c1 3300050494 Bacteria 76090
201 nmdc:mga06z11_27_c1 3300050494 Bacteria 64010
202 nmdc:mga04h51_147_c1 3300050495 Bacteria 20575
203 nmdc:mga04h51_14_c1 3300050495 Bacteria 77981
204 nmdc:mga07m45_18564_c1 3300050496 Bacteria 3757
205 Ga0500643_004214 3300053087 Bacteria 6588
206 Ga0500643_004921 3300053087 Bacteria 5880
207 Ga0500644_0017446 3300053088 Bacteria 2084
208 Ga0500566_0004378 3300053094 Bacteria 8429
209 Ga0500641_0000561 3300053096 Bacteria 13439
210 Ga0500555_001724 3300053103 Bacteria 6563
211 Ga0500556_0000074 3300053104 Bacteria 98799
212 Ga0500562_004947 3300053108 Bacteria 3359
213 Ga0500572_001421 3300053111 Bacteria 6580
214 Ga0500595_010511 3300053119 Bacteria 3675
215 Ga0500642_0000002 3300053130 Bacteria 795093
216 Ga0500568_0000765 3300053139 Bacteria 22816
217 Ga0500568_0020400 3300053139 Bacteria 2867
218 Ga0500573_0001109 3300053140 Bacteria 12487
219 Ga0500573_0014639 3300053140 Bacteria 4440
220 Ga0500573_0043325 3300053140 Bacteria 2597
221 Ga0500616_0006069 3300053153 Bacteria 8015
222 Ga0500624_000053 3300053157 Bacteria 74086
223 Ga0500624_000063 3300053157 Bacteria 65333
224 Ga0500645_000439 3300053730 Bacteria 28425
225 Ga0500645_001133 3300053730 Bacteria 14464
226 Ga0500645_001264 3300053730 Bacteria 13262
227 Ga0500645_005011 3300053730 Bacteria 4962
228 2512644699 2512564014 Bacteria 4639632
229 2512645207 2512564014 Bacteria 4639632
230 2643728357 2643221541 Bacteria 5498788
231 2644042694 2643221606 Bacteria 5588032
232 2644352667 2643221663 Bacteria 3425771
233 2644352668 2643221663 Bacteria 3425771
234 2644395875 2643221671 Bacteria 5496681
235 2644550386 2643221699 Bacteria 5731501
236 2809062206 2808606401 Bacteria 4586670
237 2809063044 2808606401 Bacteria 4586670
238 2809078454 2808606404 Bacteria 4652788
239 2809079008 2808606404 Bacteria 4652788
240 2809082595 2808606405 Bacteria 4586632
241 2809083617 2808606405 Bacteria 4586632
242 2830077564 2830075706 Bacteria 3855215
243 2848298042 2848297114 Bacteria 3608511
244 2880518987 2880518877 Bacteria 5012590
245 2880520299 2880518877 Bacteria 5012590
246 2919139291 2919138771 Bacteria 5281312
247 2919709574 2919709256 Bacteria 4318106
248 2919710501 2919709256 Bacteria 4318106
249 2928974539 2928972540 Bacteria 3058286
250 2941489343 2941485952 Bacteria 3591484
251 2941489344 2941485952 Bacteria 3591484
252 2946788483 2946787523 Bacteria 4366789
253 2946789816 2946787523 Bacteria 4366789
254 2977243461 2977240413 Bacteria 3191065
255 2990268928 2990265787 Bacteria 3943888
256 2993697260 2993693658 Bacteria 4040749
257 8057104733 8057101203 Bacteria 5034064
258 Ga0075368_10000134
259 JGI24739J22299_10004294
260 JGI24737J22298_10001084
261 Ga0055536_1001041
262 Ga0055530_10000413
263 Ga0055531_10008369
264 Ga0065165_1000041
265 Ga0065165_1004128
266 Ga0065165_1008880
267 Ga0065165_1013455
268 Ga0070658_10000001
269 Ga0070658_10000082
270 Ga0070670_100047329
271 Ga0070660_100000177
272 Ga0070660_100000368
273 Ga0070660_100002098
274 Ga0070661_100000010
275 Ga0070668_100002089
276 Ga0070675_100027771
277 Ga0070671_100008820
278 Ga0070659_100000058
279 Ga0070659_100014002
280 Ga0070659_100038903
281 Ga0070667_100007933
282 Ga0070685_10001478
283 Ga0070686_100000123
284 Ga0070665_100000011
285 Ga0070665_100080163
286 Ga0068855_100096101
287 Ga0068857_100008933
288 Ga0068859_100102506
289 Ga0068863_100025055
290 Ga0068860_100003204
291 Ga0068860_100031143
292 Ga0068862_100000370
293 Ga0075368_10000252
294 Ga0075367_10000054
295 Ga0075370_10006098
296 Ga0068865_100000543
297 Ga0097620_100102504
298 Ga0105240_10009089
299 Ga0105245_10072769
300 Ga0105248_10001438
301 Ga0105248_10073131
302 Ga0105238_10006801
303 Ga0105238_10036744
304 Ga0105249_10000043
305 Ga0157369_10010471
306 Ga0163162_10013953
307 Ga0163162_10036961
308 Ga0206356_10798647
309 Ga0213873_10000006
310 Ga0213876_10000004
311 Ga0213876_10002175
312 Ga0213876_10002835
313 Ga0209147_100491
314 Ga0209147_101368
315 Ga0209676_1000082
316 Ga0209676_1001822
317 Ga0209758_1000541
318 Ga0209050_1000034
319 Ga0209050_1007758
320 Ga0209257_1000052
321 Ga0209257_1000218
322 Ga0209257_1002328
323 Ga0207710_10015227
324 Ga0207647_10019602
325 Ga0207705_10000002
326 Ga0207705_10000256
327 Ga0207695_10002860
328 Ga0207657_10000082
329 Ga0207657_10001962
330 Ga0207657_10005009
331 Ga0207649_10000165
332 Ga0207681_10083023
333 Ga0207694_10026261
334 Ga0207659_10006231
335 Ga0207687_10059211
336 Ga0207690_10000070
337 Ga0207690_10002558
338 Ga0207690_10008820
339 Ga0207690_10014878
340 Ga0207690_10026118
341 Ga0207706_10014749
342 Ga0207706_10029021
343 Ga0207704_10001969
344 Ga0207711_10003166
345 Ga0207711_10013627
346 Ga0207667_10034188
347 Ga0207712_10000095
348 Ga0207668_10001196
349 Ga0207703_10060270
350 Ga0207641_10008795
351 Ga0207641_10047399
352 Ga0207648_10018282
353 Ga0207676_10010521
354 Ga0207674_10003133
355 Ga0209813_10000026
356 Ga0209813_10000063
357 Ga0268266_10000058
358 Ga0268266_10031609
359 Ga0268265_10000189
360 Ga0268264_10000657
361 Ga0265332_10019052
362 Ga0265339_10014169
363 Ga0265316_10051762
364 Ga0265314_10003107
365 Ga0265314_10050740
366 Ga0307406_10000923
367 Ga0307414_10016256
368 Ga0307510_10031573
369 Ga0373927_0000100
370 Ga0373925_0000636
371 Ga0395899_0000197
372 Ga0395900_0000006
373 Ga0395905_0008294
374 Ga0395905_0023326
375 Ga0395905_0073132
376 Ga0395905_0110992
377 Ga0395901_0000001
378 Ga0395901_0015867
379 Ga0237816_00540
380 Ga0436365_0668445
381 Ga0436365_1215130
382 Ga0436362_0094317
383 Ga0439458_0001026
384 Ga0439458_0001805
385 Ga0466965_0014073
386 Ga0451576_0160564
387 Ga0495627_000156
388 Ga0495627_000193
389 Ga0495627_000478
390 Ga0495627_000578
391 Ga0495638_0045538
392 Ga0495638_0049585
393 Ga0495583_0000023
394 Ga0495583_0000840
395 Ga0495583_0003453
396 Ga0495606_0003584
397 Ga0495610_0000291
398 Ga0495610_0001092
399 Ga0495610_0031766
400 Ga0495632_0000006
401 Ga0495632_0000042
402 Ga0495632_0042955
403 Ga0495637_0000626
404 Ga0495637_0000784
405 Ga0495643_0000005
406 Ga0495643_0000021
407 Ga0495648_0010683
408 Ga0495663_0000008
409 Ga0495663_0000015
410 Ga0495633_0000190
411 Ga0495633_0000197
412 Ga0495633_0000262
413 Ga0495633_0002635
414 Ga0495633_0026304
415 Ga0495668_0015238
416 Ga0495625_0000240
417 Ga0495625_0000263
418 Ga0495625_0003788
419 Ga0495625_0007915
420 Ga0495625_0029616
421 Ga0495661_0071132
422 Ga0495613_0002661
423 Ga0495671_0000007
424 Ga0495671_0000017
425 Ga0495649_0001230
426 Ga0495677_0009823
427 Ga0495681_0000032
428 Ga0495681_0000098
429 Ga0495681_0021398
430 Ga0495686_0000007
431 Ga0495686_0003444
432 Ga0495686_0008091
433 Ga0496102_0084851
434 Ga0496109_0034500
435 Ga0496115_0000414
436 Ga0496115_0032677
437 Ga0496121_0058246
438 Ga0496123_0012290
439 Ga0496123_0067572
440 Ga0496125_0000771
441 Ga0501032_0002300
442 Ga0501034_0104894
443 Ga0501037_0056205
444 Ga0501047_0000490
445 Ga0501047_0002639
446 Ga0501067_0000802
447 Ga0501067_0009356
448 Ga0501068_0001057
449 Ga0501068_0016127
450 Ga0501073_0000092
451 Ga0501073_0023525
452 Ga0501077_0001973
453 Ga0501249_000049
454 Ga0501080_0002609
455 Ga0501080_0003917
456 Ga0501044_0035647
457 nmdc:mga06z11_19_c1
458 nmdc:mga06z11_27_c1
459 nmdc:mga04h51_147_c1
460 nmdc:mga04h51_14_c1
461 nmdc:mga07m45_18564_c1
462 Ga0500643_004214
463 Ga0500643_004921
464 Ga0500644_0017446
465 Ga0500566_0004378
466 Ga0500641_0000561
467 Ga0500555_001724
468 Ga0500556_0000074
469 Ga0500562_004947
470 Ga0500572_001421
471 Ga0500595_010511
472 Ga0500642_0000002
473 Ga0500568_0000765
474 Ga0500568_0020400
475 Ga0500573_0001109
476 Ga0500573_0014639
477 Ga0500573_0043325
478 Ga0500616_0006069
479 Ga0500624_000053
480 Ga0500624_000063
481 Ga0500645_000439
482 Ga0500645_001133
483 Ga0500645_001264
484 Ga0500645_005011
485 2512644699
486 2512645207
487 2643728357
488 2644042694
489 2644352667
490 2644352668
491 2644395875
492 2644550386
493 2809062206
494 2809063044
495 2809078454
496 2809079008
497 2809082595
498 2809083617
499 2830077564
500 2848298042
501 2880518987
502 2880520299
503 2919139291
504 2919709574
505 2919710501
506 2928974539
507 2941489343
508 2941489344
509 2946788483
510 2946789816
511 2977243461
512 2990268928
513 2993697260
514 8057104733

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05960

DUF885

Bacterial protein of unknown function (DUF885)

72

618

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3o0y-assembly4.cif.gz_A the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.9257 30 600
3o0y-assembly2.cif.gz_B the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.9171 30 600
3o0y-assembly4.cif.gz_A the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.9028 30 600
3o0y-assembly2.cif.gz_B the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.8945 30 600
3iuk-assembly2.cif.gz_B crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.8011 33 594
ID Description Score Start End Superfamily
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.9085 67 591 1.10.1370.30
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.85 67 591 1.10.1370.30
af_A4HVE5_1_501_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.3917 29 595 1.10.1370.30
5e3xA00 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.3906 81 592 1.10.1370.30
af_A4HVE5_1_501_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.3663 29 595 1.10.1370.30
ID Description Score Start End GO Terms
AF-A0A7X5N3H8-F1-model_v4 DUF885 family protein 0.9847 458 600
AF-A0A520HG02-F1-model_v4 DUF885 family protein 0.984 30 413
AF-M4RTT3-F1-model_v4 Lipoprotein 0.9838 458 602
AF-A0A4Q5SBL0-F1-model_v4 DUF885 domain-containing protein 0.9817 266 598
AF-A0A520ID79-F1-model_v4 DUF885 family protein 0.9809 183 603

Map