F368655

General Info

Members Datasets Scaffolds Average Seq Length
259 179 518 471

Family's Representative Sequence

Representative Sequence 3300005539|Ga0068853_100026765|Ga0068853_1000267654
Length 533
Sequence VTRTLLLVTNALQGPLDFQISNSKFEIYNPGMPEKDDLSCSRRSFVQGLSATVVTLASGLGNAALVKAPPRAEFLQMGLVEAGQQVRTKKLSPVELTQACLSRIERLNPSLNAFITVTAESALARAHEAETEIQGGKWRGPLHGVPIALKDLFDTAGVRTTAASELFKDRVPTQDGEIVRRLKDAGAILLGKLNMHEFAYGGSTVVSYYGPVHNPWSLDHEAGGSSSGSAVAMAAGLCYGSVGSDTGGSIRQPSAYCGTVGFKPTYGRVSTRGVVPLSWLYDHVGPMTRTVADAAAMLQVLAGYDPEDANSADQPVPDYAAALSQSGHLRVGVPRAYFYEGLHPEIETAVNAALKEIGKLASSVRDIEMPASNDTTILRAEAYAYHAENVKKSPELYQPETLKRIRAGEDVTVATYIQARRQVEQYRHNIRKLFATVDLLVTPTTPVPPFTISELLADMDKLRTKEVLTLRNTRPFNILGLPTISVPCGFTKSGLPIGLQISGAPWAEGNVLRLAHAYEQQTEWHKKRPKLDA

Samples

Sample ID Description Type Environment
1 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
65 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
66 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
67 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
68 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
95 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
96 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
97 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
98 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
99 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
100 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
101 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
104 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
105 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
106 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
107 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
108 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
109 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
110 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
111 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
112 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
113 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
114 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
115 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
116 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
117 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
118 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
119 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
120 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
121 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
123 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
124 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
127 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
128 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
129 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
130 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
131 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
132 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
133 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
136 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
137 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
138 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
139 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
140 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
141 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
142 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
143 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
144 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
145 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
146 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
147 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
148 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
149 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
150 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
151 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
152 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
153 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
154 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
155 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
156 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
157 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
158 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
159 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
160 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
161 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
162 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
163 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
167 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
168 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
169 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
170 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
175 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
176 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
177 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
178 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
179 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.84
Metatranscriptomes 0.77
Isolates 0.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.77
Nodule 0.39
Rhizoplane 3.86
Rhizosphere 88.8
Stem 0
Stem Tuber 0
Unclassified 6.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068853_100026765 3300005539 Bacteria 4844
2 rootH2_10010040 3300003320 Bacteria 11889
3 Ga0065707_10011077 3300005295 Bacteria 2281
4 Ga0065707_10097583 3300005295 Bacteria 3151
5 Ga0070683_100029057 3300005329 Bacteria 5002
6 Ga0070670_100108333 3300005331 Bacteria 2394
7 Ga0068869_100000993 3300005334 Bacteria 16464
8 Ga0070666_10022602 3300005335 Bacteria 4085
9 Ga0070689_100060228 3300005340 Bacteria 2951
10 Ga0070669_100006265 3300005353 Bacteria 8584
11 Ga0070675_100001745 3300005354 Bacteria 16047
12 Ga0070673_100119064 3300005364 Bacteria 2200
13 Ga0070667_100078931 3300005367 Bacteria 2813
14 Ga0070709_10059226 3300005434 Bacteria 2431
15 Ga0070709_10072767 3300005434 Bacteria 2223
16 Ga0070714_100016702 3300005435 Bacteria 5934
17 Ga0070714_100105164 3300005435 Unclassified 2492
18 Ga0070713_100011539 3300005436 Bacteria 6438
19 Ga0070713_100026093 3300005436 Bacteria 4581
20 Ga0070713_100029363 3300005436 Bacteria 4354
21 Ga0070711_100008651 3300005439 Bacteria 6245
22 Ga0070711_100012362 3300005439 Bacteria 5330
23 Ga0070705_100007304 3300005440 Bacteria 5436
24 Ga0070700_100004386 3300005441 Bacteria 7367
25 Ga0070694_100023144 3300005444 Bacteria 3991
26 Ga0070694_100039153 3300005444 Bacteria 3154
27 Ga0070694_100056675 3300005444 Bacteria 2662
28 Ga0070708_100000137 3300005445 Bacteria 50233
29 Ga0070708_100008819 3300005445 Bacteria 8113
30 Ga0070708_100056925 3300005445 Unclassified 3479
31 Ga0070708_100194646 3300005445 Bacteria 1897
32 Ga0070708_100201181 3300005445 Bacteria 1865
33 Ga0070678_100028638 3300005456 Bacteria 3802
34 Ga0070662_100078384 3300005457 Bacteria 2454
35 Ga0070706_100001324 3300005467 Bacteria 26322
36 Ga0070706_100285875 3300005467 Bacteria 1539
37 Ga0070707_100000651 3300005468 Bacteria 34704
38 Ga0070707_100005775 3300005468 Bacteria 11540
39 Ga0070707_100009733 3300005468 Bacteria 8935
40 Ga0070707_100074102 3300005468 Bacteria 3282
41 Ga0070698_100000902 3300005471 Bacteria 32626
42 Ga0070698_100191748 3300005471 Bacteria 1981
43 Ga0070699_100000439 3300005518 Bacteria 39981
44 Ga0070697_100000265 3300005536 Bacteria 42493
45 Ga0070697_100232493 3300005536 Bacteria 1573
46 Ga0070695_100051152 3300005545 Bacteria 2650
47 Ga0070696_100008534 3300005546 Bacteria 6858
48 Ga0070696_100048813 3300005546 Bacteria 2939
49 Ga0070704_100082484 3300005549 Bacteria 2371
50 Ga0068859_100005154 3300005617 Bacteria 13269
51 Ga0068866_10047310 3300005718 Bacteria 2168
52 Ga0068861_100033533 3300005719 Bacteria 3789
53 Ga0068863_100053989 3300005841 Bacteria 3808
54 Ga0068858_100066040 3300005842 Bacteria 3349
55 Ga0068862_100029407 3300005844 Bacteria 4630
56 Ga0081455_10097734 3300005937 Bacteria 2365
57 Ga0070717_10001902 3300006028 Bacteria 14610
58 Ga0070717_10002726 3300006028 Bacteria 12476
59 Ga0070717_10009531 3300006028 Bacteria 7301
60 Ga0070717_10010679 3300006028 Bacteria 6944
61 Ga0070717_10011295 3300006028 Bacteria 6777
62 Ga0070717_10070990 3300006028 Unclassified 2903
63 Ga0070717_10074472 3300006028 Bacteria 2838
64 Ga0070717_10113004 3300006028 Unclassified 2319
65 Ga0070717_10122404 3300006028 Bacteria 2230
66 Ga0070716_100078364 3300006173 Bacteria 1964
67 Ga0070712_100005816 3300006175 Bacteria 7629
68 Ga0070712_100015164 3300006175 Bacteria 4956
69 Ga0097621_100002813 3300006237 Bacteria 11919
70 Ga0068871_100089104 3300006358 Bacteria 2568
71 Ga0075434_100001198 3300006871 Bacteria 21539
72 Ga0068865_100004470 3300006881 Bacteria 8437
73 Ga0075436_100003859 3300006914 Bacteria 10281
74 Ga0075436_100045203 3300006914 Bacteria 3037
75 Ga0097620_100005154 3300006931 Bacteria 13269
76 Ga0075435_100000009 3300007076 Bacteria 114381
77 Ga0075435_100077898 3300007076 Bacteria 2718
78 Ga0105240_10045271 3300009093 Bacteria 5583
79 Ga0105240_10151186 3300009093 Bacteria 2765
80 Ga0111539_10021140 3300009094 Bacteria 8014
81 Ga0111539_10176522 3300009094 Bacteria 2495
82 Ga0105247_10080900 3300009101 Bacteria 2047
83 Ga0105243_10019445 3300009148 Bacteria 5149
84 Ga0105241_10016875 3300009174 Bacteria 5359
85 Ga0105242_10016529 3300009176 Bacteria 5736
86 Ga0105242_10195674 3300009176 Bacteria 1793
87 Ga0105237_10052637 3300009545 Bacteria 4086
88 Ga0105237_10056595 3300009545 Bacteria 3925
89 Ga0105249_10086472 3300009553 Bacteria 2924
90 Ga0105239_10024137 3300010375 Bacteria 6698
91 Ga0105239_10159755 3300010375 Bacteria 2517
92 Ga0105246_10007523 3300011119 Bacteria 6681
93 Ga0157369_10067968 3300013105 Bacteria 3829
94 Ga0157374_10104007 3300013296 Bacteria 2726
95 Ga0157374_10130690 3300013296 Bacteria 2430
96 Ga0157378_10099381 3300013297 Bacteria 2655
97 Ga0163162_10000089 3300013306 Bacteria 84768
98 Ga0163162_10083557 3300013306 Unclassified 3267
99 Ga0163162_10246973 3300013306 Bacteria 1916
100 Ga0157372_10091312 3300013307 Unclassified 3463
101 Ga0157372_10176599 3300013307 Bacteria 2472
102 Ga0157380_10004414 3300014326 Bacteria 9749
103 Ga0157380_10005978 3300014326 Bacteria 8517
104 Ga0213876_10034730 3300021384 Bacteria 2659
105 Ga0213875_10018538 3300021388 Bacteria 3353
106 Ga0213875_10018797 3300021388 Bacteria 3328
107 Ga0213875_10025311 3300021388 Bacteria 2827
108 Ga0224572_1000554 3300024225 Bacteria 4575
109 Ga0224572_1002975 3300024225 Unclassified 2808
110 Ga0228598_1000004 3300024227 Bacteria 30534
111 Ga0228598_1011980 3300024227 Unclassified 1724
112 Ga0207647_10020356 3300025904 Bacteria 4449
113 Ga0207699_10017598 3300025906 Bacteria 3767
114 Ga0207699_10023829 3300025906 Bacteria 3337
115 Ga0207684_10003707 3300025910 Bacteria 14797
116 Ga0207684_10007909 3300025910 Bacteria 9504
117 Ga0207684_10066461 3300025910 Bacteria 3062
118 Ga0207671_10157509 3300025914 Bacteria 1757
119 Ga0207693_10001392 3300025915 Bacteria 21445
120 Ga0207693_10006222 3300025915 Bacteria 9904
121 Ga0207693_10028739 3300025915 Bacteria 4394
122 Ga0207693_10181839 3300025915 Bacteria 1655
123 Ga0207660_10070215 3300025917 Bacteria 2546
124 Ga0207646_10000494 3300025922 Bacteria 52791
125 Ga0207646_10010278 3300025922 Bacteria 9159
126 Ga0207646_10038366 3300025922 Bacteria 4315
127 Ga0207650_10104261 3300025925 Bacteria 2188
128 Ga0207659_10001986 3300025926 Bacteria 12099
129 Ga0207700_10006033 3300025928 Bacteria 7293
130 Ga0207700_10117137 3300025928 Bacteria 2153
131 Ga0207664_10011644 3300025929 Bacteria 6264
132 Ga0207664_10097602 3300025929 Unclassified 2421
133 Ga0207686_10042836 3300025934 Bacteria 2770
134 Ga0207669_10050068 3300025937 Unclassified 2495
135 Ga0207704_10013352 3300025938 Bacteria 4108
136 Ga0207704_10019762 3300025938 Bacteria 3546
137 Ga0207704_10063124 3300025938 Bacteria 2307
138 Ga0207689_10000243 3300025942 Bacteria 48629
139 Ga0207651_10050556 3300025960 Bacteria 2823
140 Ga0207668_10116482 3300025972 Bacteria 2015
141 Ga0207639_10016332 3300026041 Bacteria 5250
142 Ga0207708_10004021 3300026075 Bacteria 10817
143 Ga0207641_10008297 3300026088 Bacteria 8584
144 Ga0207641_10152354 3300026088 Bacteria 2095
145 Ga0207648_10063648 3300026089 Bacteria 3214
146 Ga0207676_10186633 3300026095 Bacteria 1821
147 Ga0207675_100042706 3300026118 Bacteria 4233
148 Ga0207675_100052494 3300026118 Bacteria 3804
149 Ga0207683_10040455 3300026121 Bacteria 4068
150 Ga0207428_10111572 3300027907 Bacteria 2104
151 Ga0268265_10033616 3300028380 Bacteria 3730
152 Ga0307515_10024549 3300028794 Bacteria 10499
153 Ga0307515_10046317 3300028794 Bacteria 6651
154 Ga0265760_10001390 3300031090 Bacteria 7105
155 Ga0265330_10052069 3300031235 Bacteria 1794
156 Ga0265325_10014096 3300031241 Unclassified 4528
157 Ga0265340_10013095 3300031247 Bacteria 4365
158 Ga0265316_10104629 3300031344 Bacteria 2148
159 Ga0307513_10043031 3300031456 Bacteria 4966
160 Ga0307513_10131972 3300031456 Bacteria 2442
161 Ga0307509_10040346 3300031507 Bacteria 5077
162 Ga0307408_100009619 3300031548 Bacteria 6376
163 Ga0307508_10000042 3300031616 Bacteria 146600
164 Ga0307405_10024550 3300031731 Bacteria 3445
165 Ga0316577_10037260 3300031733 Bacteria 2719
166 Ga0307412_10001580 3300031911 Bacteria 12540
167 Ga0307409_100042485 3300031995 Bacteria 3405
168 Ga0307415_100003398 3300032126 Bacteria 8101
169 Ga0316588_1003187 3300033528 Bacteria 2959
170 Ga0373926_0004272 3300035083 Bacteria 4672
171 Ga0373934_0015974 3300035086 Bacteria 2852
172 Ga0373936_0004056 3300035113 Bacteria 5519
173 Ga0373945_0004620 3300035116 Bacteria 4386
174 Ga0373956_0014855 3300035119 Bacteria 3256
175 Ga0373943_0007476 3300035170 Bacteria 4909
176 Ga0373924_0000105 3300035410 Bacteria 23678
177 Ga0373935_0036796 3300035692 Bacteria 3061
178 Ga0373927_0008934 3300035695 Bacteria 6728
179 Ga0373927_0014576 3300035695 Bacteria 5201
180 Ga0373927_0045214 3300035695 Bacteria 2848
181 Ga0373933_0010699 3300035724 Bacteria 5032
182 Ga0373947_0005603 3300035725 Bacteria 7322
183 Ga0373947_0016524 3300035725 Bacteria 4241
184 Ga0373937_0000222 3300036401 Bacteria 55008
185 Ga0373937_0002898 3300036401 Bacteria 14319
186 Ga0373925_0017107 3300037068 Bacteria 5249
187 Ga0373925_0041074 3300037068 Unclassified 3427
188 Ga0395905_0070323 3300037471 Bacteria 3279
189 Ga0436364_0273110 3300037853 Bacteria 16854
190 Ga0436364_0294751 3300037853 Bacteria 4504
191 Ga0436364_0797716 3300037853 Bacteria 4738
192 Ga0436364_0898844 3300037853 Bacteria 2068
193 Ga0395901_0328048 3300038443 Bacteria 1583
194 Ga0436365_0505900 3300039437 Bacteria 5996
195 Ga0439446_0000983 3300042156 Bacteria 6211
196 Ga0450908_002525 3300042184 Bacteria 3588
197 Ga0439435_0000129 3300042436 Bacteria 9984
198 Ga0453683_0014681 3300044673 Bacteria 5083
199 Ga0466963_0059699 3300044694 Bacteria 2546
200 Ga0466963_0092998 3300044694 Bacteria 2055
201 Ga0466963_0151360 3300044694 Bacteria 1611
202 Ga0466957_0000684 3300044842 Bacteria 17290
203 Ga0466959_0004422 3300045049 Bacteria 9413
204 Ga0466959_0143630 3300045049 Unclassified 1685
205 Ga0451576_0028121 3300045051 Bacteria 6027
206 Ga0466967_0136888 3300045976 Bacteria 2278
207 Ga0495629_0025065 3300046459 Bacteria 4242
208 Ga0495638_0004629 3300046460 Bacteria 10409
209 Ga0495651_0041204 3300046462 Bacteria 3588
210 Ga0495580_0000012 3300046472 Bacteria 97735
211 Ga0495580_0001749 3300046472 Bacteria 19093
212 Ga0495580_0032872 3300046472 Bacteria 3738
213 Ga0495580_0104897 3300046472 Unclassified 1964
214 Ga0495580_0109350 3300046472 Unclassified 1919
215 Ga0495582_0040626 3300046473 Bacteria 2562
216 Ga0495639_0036048 3300046475 Bacteria 2214
217 Ga0495664_0005638 3300046477 Bacteria 6887
218 Ga0495594_0033580 3300046499 Bacteria 2790
219 Ga0495630_0063825 3300046517 Bacteria 2767
220 Ga0495666_0064187 3300046526 Bacteria 1753
221 Ga0495652_0044444 3300046529 Bacteria 3825
222 Ga0495652_0139284 3300046529 Bacteria 1910
223 Ga0495588_0075550 3300046674 Bacteria 1755
224 Ga0495623_0026193 3300046679 Unclassified 3755
225 Ga0495613_0005460 3300046689 Bacteria 9549
226 Ga0495613_0122923 3300046689 Bacteria 1863
227 Ga0495604_0015395 3300047317 Bacteria 6103
228 Ga0495674_0209499 3300047319 Bacteria 1615
229 Ga0495686_0012598 3300047472 Bacteria 5911
230 Ga0495593_0043883 3300047673 Bacteria 2394
231 Ga0495614_0012246 3300048089 Bacteria 3768
232 Ga0496104_0084655 3300048907 Bacteria 3026
233 Ga0496105_0006402 3300048908 Bacteria 9053
234 Ga0496106_0021862 3300048909 Bacteria 4752
235 Ga0496107_0032672 3300048910 Bacteria 3720
236 Ga0496110_0017767 3300048913 Bacteria 5952
237 Ga0496111_0025627 3300048914 Bacteria 4161
238 Ga0496111_0057950 3300048914 Bacteria 2804
239 Ga0496112_0002615 3300048915 Bacteria 14537
240 Ga0496112_0004735 3300048915 Bacteria 11593
241 Ga0496114_0187237 3300048917 Bacteria 1809
242 Ga0501036_0002887 3300049572 Bacteria 13629
243 Ga0501039_0002858 3300049575 Bacteria 12914
244 Ga0501042_0018843 3300049578 Bacteria 4784
245 Ga0501071_0103184 3300049587 Bacteria 2103
246 Ga0501072_0052154 3300049588 Bacteria 3220
247 Ga0501075_0001878 3300049591 Bacteria 13864
248 Ga0501076_0001539 3300049592 Bacteria 15442
249 Ga0501081_0044870 3300049743 Bacteria 3035
250 Ga0501035_0012882 3300049822 Bacteria 7723
251 Ga0501045_0052549 3300049824 Bacteria 2975
252 nmdc:mga08y16_65781_c1 3300050511 Bacteria 3784
253 nmdc:mga0n895_76_c1 3300050512 Bacteria 56942
254 nmdc:mga0rr50_25_c1 3300050513 Bacteria 114931
255 nmdc:mga08x19_5186_c1 3300050514 Bacteria 7703
256 nmdc:mga08x19_9014_c1 3300050514 Bacteria 5958
257 Ga0500641_0013927 3300053096 Bacteria 2961
258 Ga0500562_002504 3300053108 Bacteria 4587
259 2513698926 2513237101 Bacteria 7952346
260 Ga0068853_100026765
261 rootH2_10010040
262 Ga0065707_10011077
263 Ga0065707_10097583
264 Ga0070683_100029057
265 Ga0070670_100108333
266 Ga0068869_100000993
267 Ga0070666_10022602
268 Ga0070689_100060228
269 Ga0070669_100006265
270 Ga0070675_100001745
271 Ga0070673_100119064
272 Ga0070667_100078931
273 Ga0070709_10059226
274 Ga0070709_10072767
275 Ga0070714_100016702
276 Ga0070714_100105164
277 Ga0070713_100011539
278 Ga0070713_100026093
279 Ga0070713_100029363
280 Ga0070711_100008651
281 Ga0070711_100012362
282 Ga0070705_100007304
283 Ga0070700_100004386
284 Ga0070694_100023144
285 Ga0070694_100039153
286 Ga0070694_100056675
287 Ga0070708_100000137
288 Ga0070708_100008819
289 Ga0070708_100056925
290 Ga0070708_100194646
291 Ga0070708_100201181
292 Ga0070678_100028638
293 Ga0070662_100078384
294 Ga0070706_100001324
295 Ga0070706_100285875
296 Ga0070707_100000651
297 Ga0070707_100005775
298 Ga0070707_100009733
299 Ga0070707_100074102
300 Ga0070698_100000902
301 Ga0070698_100191748
302 Ga0070699_100000439
303 Ga0070697_100000265
304 Ga0070697_100232493
305 Ga0070695_100051152
306 Ga0070696_100008534
307 Ga0070696_100048813
308 Ga0070704_100082484
309 Ga0068859_100005154
310 Ga0068866_10047310
311 Ga0068861_100033533
312 Ga0068863_100053989
313 Ga0068858_100066040
314 Ga0068862_100029407
315 Ga0081455_10097734
316 Ga0070717_10001902
317 Ga0070717_10002726
318 Ga0070717_10009531
319 Ga0070717_10010679
320 Ga0070717_10011295
321 Ga0070717_10070990
322 Ga0070717_10074472
323 Ga0070717_10113004
324 Ga0070717_10122404
325 Ga0070716_100078364
326 Ga0070712_100005816
327 Ga0070712_100015164
328 Ga0097621_100002813
329 Ga0068871_100089104
330 Ga0075434_100001198
331 Ga0068865_100004470
332 Ga0075436_100003859
333 Ga0075436_100045203
334 Ga0097620_100005154
335 Ga0075435_100000009
336 Ga0075435_100077898
337 Ga0105240_10045271
338 Ga0105240_10151186
339 Ga0111539_10021140
340 Ga0111539_10176522
341 Ga0105247_10080900
342 Ga0105243_10019445
343 Ga0105241_10016875
344 Ga0105242_10016529
345 Ga0105242_10195674
346 Ga0105237_10052637
347 Ga0105237_10056595
348 Ga0105249_10086472
349 Ga0105239_10024137
350 Ga0105239_10159755
351 Ga0105246_10007523
352 Ga0157369_10067968
353 Ga0157374_10104007
354 Ga0157374_10130690
355 Ga0157378_10099381
356 Ga0163162_10000089
357 Ga0163162_10083557
358 Ga0163162_10246973
359 Ga0157372_10091312
360 Ga0157372_10176599
361 Ga0157380_10004414
362 Ga0157380_10005978
363 Ga0213876_10034730
364 Ga0213875_10018538
365 Ga0213875_10018797
366 Ga0213875_10025311
367 Ga0224572_1000554
368 Ga0224572_1002975
369 Ga0228598_1000004
370 Ga0228598_1011980
371 Ga0207647_10020356
372 Ga0207699_10017598
373 Ga0207699_10023829
374 Ga0207684_10003707
375 Ga0207684_10007909
376 Ga0207684_10066461
377 Ga0207671_10157509
378 Ga0207693_10001392
379 Ga0207693_10006222
380 Ga0207693_10028739
381 Ga0207693_10181839
382 Ga0207660_10070215
383 Ga0207646_10000494
384 Ga0207646_10010278
385 Ga0207646_10038366
386 Ga0207650_10104261
387 Ga0207659_10001986
388 Ga0207700_10006033
389 Ga0207700_10117137
390 Ga0207664_10011644
391 Ga0207664_10097602
392 Ga0207686_10042836
393 Ga0207669_10050068
394 Ga0207704_10013352
395 Ga0207704_10019762
396 Ga0207704_10063124
397 Ga0207689_10000243
398 Ga0207651_10050556
399 Ga0207668_10116482
400 Ga0207639_10016332
401 Ga0207708_10004021
402 Ga0207641_10008297
403 Ga0207641_10152354
404 Ga0207648_10063648
405 Ga0207676_10186633
406 Ga0207675_100042706
407 Ga0207675_100052494
408 Ga0207683_10040455
409 Ga0207428_10111572
410 Ga0268265_10033616
411 Ga0307515_10024549
412 Ga0307515_10046317
413 Ga0265760_10001390
414 Ga0265330_10052069
415 Ga0265325_10014096
416 Ga0265340_10013095
417 Ga0265316_10104629
418 Ga0307513_10043031
419 Ga0307513_10131972
420 Ga0307509_10040346
421 Ga0307408_100009619
422 Ga0307508_10000042
423 Ga0307405_10024550
424 Ga0316577_10037260
425 Ga0307412_10001580
426 Ga0307409_100042485
427 Ga0307415_100003398
428 Ga0316588_1003187
429 Ga0373926_0004272
430 Ga0373934_0015974
431 Ga0373936_0004056
432 Ga0373945_0004620
433 Ga0373956_0014855
434 Ga0373943_0007476
435 Ga0373924_0000105
436 Ga0373935_0036796
437 Ga0373927_0008934
438 Ga0373927_0014576
439 Ga0373927_0045214
440 Ga0373933_0010699
441 Ga0373947_0005603
442 Ga0373947_0016524
443 Ga0373937_0000222
444 Ga0373937_0002898
445 Ga0373925_0017107
446 Ga0373925_0041074
447 Ga0395905_0070323
448 Ga0436364_0273110
449 Ga0436364_0294751
450 Ga0436364_0797716
451 Ga0436364_0898844
452 Ga0395901_0328048
453 Ga0436365_0505900
454 Ga0439446_0000983
455 Ga0450908_002525
456 Ga0439435_0000129
457 Ga0453683_0014681
458 Ga0466963_0059699
459 Ga0466963_0092998
460 Ga0466963_0151360
461 Ga0466957_0000684
462 Ga0466959_0004422
463 Ga0466959_0143630
464 Ga0451576_0028121
465 Ga0466967_0136888
466 Ga0495629_0025065
467 Ga0495638_0004629
468 Ga0495651_0041204
469 Ga0495580_0000012
470 Ga0495580_0001749
471 Ga0495580_0032872
472 Ga0495580_0104897
473 Ga0495580_0109350
474 Ga0495582_0040626
475 Ga0495639_0036048
476 Ga0495664_0005638
477 Ga0495594_0033580
478 Ga0495630_0063825
479 Ga0495666_0064187
480 Ga0495652_0044444
481 Ga0495652_0139284
482 Ga0495588_0075550
483 Ga0495623_0026193
484 Ga0495613_0005460
485 Ga0495613_0122923
486 Ga0495604_0015395
487 Ga0495674_0209499
488 Ga0495686_0012598
489 Ga0495593_0043883
490 Ga0495614_0012246
491 Ga0496104_0084655
492 Ga0496105_0006402
493 Ga0496106_0021862
494 Ga0496107_0032672
495 Ga0496110_0017767
496 Ga0496111_0025627
497 Ga0496111_0057950
498 Ga0496112_0002615
499 Ga0496112_0004735
500 Ga0496114_0187237
501 Ga0501036_0002887
502 Ga0501039_0002858
503 Ga0501042_0018843
504 Ga0501071_0103184
505 Ga0501072_0052154
506 Ga0501075_0001878
507 Ga0501076_0001539
508 Ga0501081_0044870
509 Ga0501035_0012882
510 Ga0501045_0052549
511 nmdc:mga08y16_65781_c1
512 nmdc:mga0n895_76_c1
513 nmdc:mga0rr50_25_c1
514 nmdc:mga08x19_5186_c1
515 nmdc:mga08x19_9014_c1
516 Ga0500641_0013927
517 Ga0500562_002504
518 2513698926

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01425

Amidase

Amidase

95

512

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ip4-assembly1.cif.gz_A the high resolution structure of gatcab 0.8955 25 467
4wj3-assembly2.cif.gz_D crystal structure of the asparagine transamidosome from pseudomonas aeruginosa 0.8886 25 471
6c62-assembly1.cif.gz_A an unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme. 0.8828 28 463
6c6g-assembly1.cif.gz_B-2 an unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme. inhibitor bound complex. 0.8806 28 463
3a2p-assembly1.cif.gz_A structure of 6-aminohexanoate cyclic dimer hydrolase 0.8711 24 472
ID Description Score Start End Superfamily
af_A0A0P0XRM7_54_372_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9359 24 245 3.90.1300.10
af_P9WQ93_21_468_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9057 30 464 3.90.1300.10
2dqnA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8901 24 468 3.90.1300.10
4wj3D00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8886 25 471 3.90.1300.10
af_A0A0P0Y7J9_128_590_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8807 28 463 3.90.1300.10
ID Description Score Start End GO Terms
AF-A0A355AYG4-F1-model_v4 Amidase domain-containing protein 0.9872 23 211 GO:0003824
AF-A0A7J9XDL3-F1-model_v4 Amidase domain-containing protein 0.9857 30 151 GO:0003824
AF-A0A6I3AVD0-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A 0.9808 26 189 GO:0016740
AF-A0A3S1E0Z4-F1-model_v4 Amidase 0.9801 24 149 GO:0012505
AF-A0A522IVD7-F1-model_v4 Amidase 0.9789 22 252 GO:0003824

Map