F368355

General Info

Members Datasets Scaffolds Average Seq Length
258 189 231 205

Family's Representative Sequence

Representative Sequence 3300047443|Ga0495687_002995|Ga0495687_002995_4942_5655
Length 237
Sequence MKQHCFDISSFQPARPNDYPTIPCMNASMSTATFVTGLMLSLSLIVAIGAQNTFVLRQGLRREHVAAVVALCVLLDIALMTLGVSGLAASLGRHPRALDALALAGALLLAAYGTAALYRAWRPQALRTASSDTAQPLARVLTQALAISLLNPHVYLDTVVLIGAVGARQPPGTQGVFLVGAGLASAAWFTALGYGARALAPLFARPAAWRVLDVVIAATMWSLAIGLVTGVLSPTAT

Samples

Sample ID Description Type Environment
1 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
2 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
3 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
4 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
5 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
6 2651869719 Genome Sequence of Pseudomonas fluorescens UM270 Isolate Rhizosphere
7 2687453129 Halotalea alkalilenta IHB B 13600 Isolate Unclassified
8 2728369097 Stutzerimonas balearica st101 Isolate Unclassified
9 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
10 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
11 2808606373 Pseudomonas sp. SLBN-2 Isolate Unclassified
12 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
13 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
14 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
15 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
16 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
17 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
18 2904456579 Variovorax sp. 2002 Isolate Unclassified
19 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
20 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
21 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
22 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
23 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
24 2929520902 Variovorax beijingensis 502 Isolate Unclassified
25 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere
26 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
27 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
28 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
29 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
30 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
31 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
32 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
33 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
34 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
35 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
38 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
39 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
42 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
47 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
48 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
49 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
50 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
51 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
52 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
53 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
54 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
55 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
56 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
57 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
58 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
59 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
62 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300012502 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610 Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
75 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
76 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
100 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
104 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
107 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
108 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
109 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
110 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
113 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
114 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
115 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
116 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
117 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
118 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
119 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
120 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
121 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
122 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
123 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
124 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
125 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
126 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
127 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
128 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
129 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
130 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
131 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
132 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
133 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
134 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
135 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
136 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
137 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
138 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
139 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
140 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
141 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
142 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
143 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
144 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
145 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
146 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
147 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
148 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
149 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
150 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
151 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
152 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
153 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
154 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
155 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
156 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
157 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
158 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
159 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
160 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
161 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
162 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
163 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
164 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
165 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
166 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
167 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
168 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
169 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
170 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
173 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
174 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
175 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
176 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
177 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
178 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
179 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
180 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
181 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
182 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
183 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
184 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
185 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
186 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
187 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
188 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere
189 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.76
Metatranscriptomes 0.78
Isolates 10.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.48
Nodule 1.55
Rhizoplane 2.33
Rhizosphere 63.95
Stem 0
Stem Tuber 0
Unclassified 9.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10003893 3300003215 Bacteria 8203
2 Ga0006562J51391_1077671 3300003578 Bacteria 10770
3 Ga0006562J51391_1077673 3300003578 Bacteria 6100
4 Ga0055530_10004592 3300003791 Bacteria 7042
5 Ga0055540_1001733 3300003792 Bacteria 12525
6 Ga0065714_10144353 3300005288 Bacteria 1149
7 Ga0070658_10152500 3300005327 Bacteria 1935
8 Ga0070676_10463317 3300005328 Bacteria 893
9 Ga0070683_100719953 3300005329 Bacteria 956
10 Ga0070680_100241178 3300005336 Bacteria 1528
11 Ga0070680_100372711 3300005336 Bacteria 1215
12 Ga0070674_100392360 3300005356 Bacteria 1132
13 Ga0070667_100153399 3300005367 Bacteria 2025
14 Ga0070663_100078436 3300005455 Bacteria 2421
15 Ga0070662_100205951 3300005457 Bacteria 1563
16 Ga0070681_10136871 3300005458 Bacteria 2380
17 Ga0070681_10182029 3300005458 Bacteria 2023
18 Ga0070681_10226521 3300005458 Bacteria 1784
19 Ga0068867_100034598 3300005459 Bacteria 3662
20 Ga0070706_100101732 3300005467 Bacteria 2670
21 Ga0070679_100028124 3300005530 Bacteria 5540
22 Ga0070679_100070713 3300005530 Bacteria 3481
23 Ga0068853_100220823 3300005539 Bacteria 1731
24 Ga0070665_100001203 3300005548 Bacteria 31567
25 Ga0070665_100049447 3300005548 Bacteria 4218
26 Ga0070665_100120572 3300005548 Bacteria 2624
27 Ga0068855_100036034 3300005563 Bacteria 5890
28 Ga0068855_100277038 3300005563 Bacteria 1864
29 Ga0068856_100188265 3300005614 Bacteria 2077
30 Ga0068852_100043566 3300005616 Bacteria 3807
31 Ga0075365_10101227 3300006038 Bacteria 1973
32 Ga0075368_10041340 3300006042 Bacteria 1811
33 Ga0075363_100022545 3300006048 Bacteria 3184
34 Ga0075364_10026160 3300006051 Bacteria 3721
35 Ga0075364_10034439 3300006051 Bacteria 3267
36 Ga0075362_10003000 3300006177 Bacteria 5806
37 Ga0075362_10007235 3300006177 Bacteria 4189
38 Ga0075362_10008557 3300006177 Bacteria 3919
39 Ga0075362_10021011 3300006177 Bacteria 2734
40 Ga0075367_10005138 3300006178 Bacteria 6461
41 Ga0075367_10013647 3300006178 Bacteria 4375
42 Ga0075367_10100008 3300006178 Bacteria 1771
43 Ga0075367_10103156 3300006178 Bacteria 1745
44 Ga0075369_10001037 3300006186 Bacteria 9292
45 Ga0075369_10051546 3300006186 Bacteria 1782
46 Ga0075366_10022610 3300006195 Bacteria 3660
47 Ga0075366_10026247 3300006195 Bacteria 3410
48 Ga0075370_10009326 3300006353 Bacteria 5093
49 Ga0075370_10012187 3300006353 Bacteria 4537
50 Ga0075370_10028162 3300006353 Bacteria 3121
51 Ga0075370_10039452 3300006353 Bacteria 2660
52 Ga0068865_100099805 3300006881 Bacteria 2123
53 Ga0079104_1002816 3300006946 Bacteria 8752
54 Ga0099826_10175287 3300006948 Bacteria 1199
55 Ga0075435_100401810 3300007076 Bacteria 1178
56 Ga0105251_10001033 3300009011 Bacteria 24453
57 Ga0105250_10092378 3300009092 Bacteria 1232
58 Ga0105240_10056729 3300009093 Bacteria 4899
59 Ga0105240_10229184 3300009093 Bacteria 2160
60 Ga0105240_10332795 3300009093 Bacteria 1727
61 Ga0105245_10586357 3300009098 Bacteria 1140
62 Ga0105243_10095300 3300009148 Bacteria 2459
63 Ga0105241_10623929 3300009174 Bacteria 976
64 Ga0105237_10013848 3300009545 Bacteria 8441
65 Ga0105237_10378817 3300009545 Bacteria 1419
66 Ga0105237_10697001 3300009545 Bacteria 1022
67 Ga0105238_10036745 3300009551 Bacteria 4980
68 Ga0105238_10117379 3300009551 Bacteria 2641
69 Ga0157347_1010374 3300012502 Bacteria 977
70 Ga0157373_10001201 3300013100 Bacteria 19803
71 Ga0157371_10000277 3300013102 Bacteria 69357
72 Ga0157370_10077567 3300013104 Bacteria 3130
73 Ga0157370_10143383 3300013104 Bacteria 2225
74 Ga0157369_10023330 3300013105 Bacteria 6892
75 Ga0182006_1041577 3300015261 Bacteria 1804
76 Ga0209758_1033986 3300025297 Bacteria 2037
77 Ga0209050_1000402 3300025298 Bacteria 80873
78 Ga0209051_1000099 3300025303 Bacteria 165161
79 Ga0207645_10149532 3300025907 Bacteria 1524
80 Ga0207705_10007175 3300025909 Bacteria 8209
81 Ga0207684_10002166 3300025910 Bacteria 20113
82 Ga0207707_10079556 3300025912 Bacteria 2862
83 Ga0207707_10246904 3300025912 Bacteria 1551
84 Ga0207695_10044340 3300025913 Bacteria 4730
85 Ga0207671_10064098 3300025914 Bacteria 2732
86 Ga0207660_10318395 3300025917 Bacteria 1242
87 Ga0207660_10458740 3300025917 Bacteria 1031
88 Ga0207657_10030762 3300025919 Bacteria 4868
89 Ga0207652_10052271 3300025921 Bacteria 3506
90 Ga0207694_10040599 3300025924 Bacteria 3583
91 Ga0207694_10048827 3300025924 Bacteria 3275
92 Ga0207694_10566242 3300025924 Bacteria 954
93 Ga0207690_10858461 3300025932 Bacteria 752
94 Ga0207706_10044280 3300025933 Bacteria 3945
95 Ga0207669_10068722 3300025937 Bacteria 2214
96 Ga0207689_10442096 3300025942 Bacteria 1086
97 Ga0207661_10055260 3300025944 Bacteria 3184
98 Ga0207667_10108499 3300025949 Bacteria 2863
99 Ga0207667_10997965 3300025949 Bacteria 825
100 Ga0207639_10229312 3300026041 Bacteria 1609
101 Ga0207678_10089868 3300026067 Bacteria 2625
102 Ga0207702_10539469 3300026078 Bacteria 1140
103 Ga0207648_10098164 3300026089 Bacteria 2564
104 Ga0207674_10054138 3300026116 Bacteria 4087
105 Ga0207674_10327700 3300026116 Bacteria 1481
106 Ga0209281_1000202 3300027111 Bacteria 135240
107 Ga0209996_1003350 3300027395 Bacteria 2013
108 Ga0209995_1020438 3300027471 Bacteria 1095
109 Ga0209983_1001258 3300027665 Bacteria 5634
110 Ga0209282_1153935 3300027666 Bacteria 1107
111 Ga0209971_1001741 3300027682 Bacteria 5339
112 Ga0268266_10002387 3300028379 Bacteria 20279
113 Ga0268266_10031649 3300028379 Bacteria 4493
114 Ga0316177_1028638 3300030731 Bacteria 1957
115 Ga0316183_1044753 3300030742 Bacteria 1582
116 Ga0316181_1006671 3300030744 Bacteria 7693
117 Ga0316182_1006463 3300030745 Bacteria 1655
118 Ga0265332_10000015 3300031238 Bacteria 243944
119 Ga0307408_100029867 3300031548 Bacteria 3780
120 Ga0307508_10049849 3300031616 Bacteria 3729
121 Ga0316576_10177783 3300031727 Bacteria 1605
122 Ga0307516_10100638 3300031730 Bacteria 2706
123 Ga0307405_10071193 3300031731 Bacteria 2236
124 Ga0307413_10110056 3300031824 Bacteria 1842
125 Ga0307406_10011586 3300031901 Bacteria 5009
126 Ga0307414_10047249 3300032004 Bacteria 2961
127 Ga0307414_10057440 3300032004 Bacteria 2735
128 Ga0316584_0008920 3300036712 Bacteria 6937
129 Ga0395898_0100363 3300037466 Bacteria 2779
130 Ga0395898_0187190 3300037466 Bacteria 1978
131 Ga0395905_0721983 3300037471 Bacteria 899
132 Ga0400483_033934 3300039062 Bacteria 1402
133 Ga0400483_228208 3300039062 Bacteria 6677
134 Ga0436363_0601723 3300039450 Bacteria 1697
135 Ga0439438_003549 3300041405 Bacteria 6270
136 Ga0439438_004978 3300041405 Bacteria 4962
137 Ga0439438_036650 3300041405 Bacteria 1285
138 Ga0451793_1391072 3300041452 Bacteria 1757
139 Ga0439431_0108216 3300041997 Bacteria 768
140 Ga0439437_001970 3300042000 Bacteria 2180
141 Ga0439449_0000091 3300042007 Bacteria 29348
142 Ga0439456_004242 3300042013 Bacteria 2908
143 Ga0450911_000026 3300042115 Bacteria 82955
144 Ga0450903_023506 3300042138 Bacteria 948
145 Ga0450904_000063 3300042139 Bacteria 23972
146 Ga0439446_0016578 3300042156 Bacteria 2053
147 Ga0439435_0070023 3300042436 Bacteria 1037
148 Ga0439459_0005878 3300042438 Bacteria 2029
149 Ga0450916_000591 3300042530 Bacteria 3245
150 Ga0450893_0004351 3300042532 Bacteria 2256
151 Ga0451577_0176317 3300042876 Bacteria 1927
152 Ga0466972_0168250 3300044658 Bacteria 1029
153 Ga0453684_0041165 3300044712 Bacteria 6255
154 Ga0453684_0053698 3300044712 Bacteria 5257
155 Ga0453684_0258898 3300044712 Bacteria 1994
156 Ga0466959_0141115 3300045049 Bacteria 1703
157 Ga0466959_0189823 3300045049 Bacteria 1434
158 Ga0451576_0006875 3300045051 Bacteria 13778
159 Ga0451576_0105205 3300045051 Bacteria 2936
160 Ga0451576_0119909 3300045051 Bacteria 2739
161 Ga0451576_1357009 3300045051 Bacteria 740
162 Ga0466967_0617267 3300045976 Bacteria 1071
163 Ga0495590_0105782 3300046457 Bacteria 1002
164 Ga0495591_017522 3300046458 Bacteria 2457
165 Ga0495653_0043675 3300046463 Bacteria 3483
166 Ga0495596_0277088 3300046500 Bacteria 651
167 Ga0495607_0009993 3300046501 Bacteria 6392
168 Ga0495607_0085596 3300046501 Bacteria 1721
169 Ga0495610_0007812 3300046512 Bacteria 7044
170 Ga0495632_0006177 3300046519 Bacteria 7758
171 Ga0495643_0005575 3300046522 Bacteria 8471
172 Ga0495643_0078560 3300046522 Bacteria 1722
173 Ga0495597_0041243 3300046542 Bacteria 2063
174 Ga0495611_0107938 3300046648 Bacteria 1295
175 Ga0495625_0129371 3300046660 Bacteria 1711
176 Ga0495625_0384678 3300046660 Bacteria 880
177 Ga0495661_0054812 3300046665 Bacteria 2392
178 Ga0495671_0009679 3300046692 Bacteria 5375
179 Ga0495649_0026031 3300046694 Bacteria 3256
180 Ga0495660_0133051 3300046810 Bacteria 1245
181 Ga0495676_0016895 3300047321 Bacteria 6460
182 Ga0495683_0344851 3300047323 Bacteria 630
183 Ga0495687_002995 3300047443 Bacteria 12765
184 Ga0495687_007052 3300047443 Bacteria 6721
185 Ga0495679_017006 3300047446 Bacteria 2614
186 Ga0495686_0002628 3300047472 Bacteria 16632
187 Ga0495686_0004841 3300047472 Bacteria 10864
188 Ga0496110_0036988 3300048913 Bacteria 4241
189 Ga0496110_0112042 3300048913 Bacteria 2453
190 Ga0496111_0000441 3300048914 Bacteria 21050
191 Ga0496117_0106688 3300048920 Bacteria 1757
192 Ga0496121_0000380 3300048924 Bacteria 90959
193 Ga0496121_0004305 3300048924 Bacteria 19283
194 Ga0496121_0075177 3300048924 Bacteria 2700
195 Ga0496122_0015324 3300048925 Bacteria 7334
196 Ga0496125_0093253 3300048928 Bacteria 2248
197 Ga0501032_0015855 3300049569 Bacteria 5312
198 Ga0501034_0643665 3300049571 Bacteria 962
199 Ga0501073_0023047 3300049589 Bacteria 4476
200 Ga0501226_000005 3300049853 Bacteria 271019
201 nmdc:mga03683_18777_c1 3300050489 Bacteria 2633
202 nmdc:mga03683_52866_c1 3300050489 Bacteria 1699
203 nmdc:mga03683_5784_c1 3300050489 Bacteria 4198
204 nmdc:mga03n38_114731_c1 3300050490 Bacteria 1317
205 nmdc:mga03n38_63541_c1 3300050490 Bacteria 1687
206 nmdc:mga00v17_20359_c1 3300050491 Bacteria 3800
207 nmdc:mga00v17_452924_c1 3300050491 Bacteria 833
208 nmdc:mga0yw44_1911_c1 3300050492 Bacteria 8600
209 nmdc:mga0yw44_63227_c1 3300050492 Bacteria 2275
210 nmdc:mga0yw44_81097_c1 3300050492 Bacteria 2033
211 nmdc:mga0yw44_93362_c1 3300050492 Bacteria 1905
212 nmdc:mga0k408_26694_c1 3300050493 Bacteria 3276
213 nmdc:mga0k408_3111_c1 3300050493 Bacteria 8793
214 nmdc:mga0k408_57566_c1 3300050493 Bacteria 2257
215 nmdc:mga06z11_113243_c1 3300050494 Bacteria 1505
216 nmdc:mga06z11_164174_c1 3300050494 Bacteria 1271
217 nmdc:mga06z11_170890_c1 3300050494 Bacteria 1248
218 nmdc:mga04h51_47497_c1 3300050495 Bacteria 1427
219 nmdc:mga07m45_18434_c1 3300050496 Bacteria 3768
220 nmdc:mga07m45_215943_c1 3300050496 Bacteria 1116
221 nmdc:mga07m45_30377_c1 3300050496 Bacteria 2993
222 nmdc:mga07m45_338969_c1 3300050496 Bacteria 874
223 nmdc:mga07m45_396889_c1 3300050496 Bacteria 801
224 nmdc:mga0sz30_4577_c2 3300050516 Bacteria 3018
225 nmdc:mga0sz30_76250_c1 3300050516 Bacteria 1447
226 nmdc:mga0sz30_99233_c1 3300050516 Bacteria 1271
227 Ga0500643_000026 3300053087 Bacteria 259231
228 Ga0500651_0084856 3300053093 Bacteria 1958
229 Ga0500562_103197 3300053108 Bacteria 776
230 Ga0500568_0028992 3300053139 Bacteria 2302
231 Ga0500573_0014476 3300053140 Bacteria 4466

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300047323 Ga0495683_0344851 Ga0495683_0344851_29_517 161
2 3300046500 Ga0495596_0277088 Ga0495596_0277088_11_505 163
3 3300050490 nmdc:mga03n38_63541_c1 nmdc:mga03n38_63541_c1_19_609 173
4 3300003578 Ga0006562J51391_1077671 Ga0006562J51391_107767110 185
5 3300003578 Ga0006562J51391_1077673 Ga0006562J51391_10776732 185
6 3300003792 Ga0055540_1001733 Ga0055540_10017332 185
7 3300006177 Ga0075362_10008557 Ga0075362_100085572 185
8 3300006353 Ga0075370_10039452 Ga0075370_100394522 185
9 3300025303 Ga0209051_1000099 Ga0209051_1000099118 185
10 3300050489 nmdc:mga03683_18777_c1 nmdc:mga03683_18777_c1_1132_1767 185
11 3300050492 nmdc:mga0yw44_81097_c1 nmdc:mga0yw44_81097_c1_1092_1727 185
12 3300050516 nmdc:mga0sz30_99233_c1 nmdc:mga0sz30_99233_c1_340_975 185
13 3300031548 Ga0307408_100029867 Ga0307408_1000298675 188
14 3300031731 Ga0307405_10071193 Ga0307405_100711933 188
15 3300031901 Ga0307406_10011586 Ga0307406_100115863 188
16 3300006051 Ga0075364_10034439 Ga0075364_100344392 189
17 3300045051 Ga0451576_0119909 Ga0451576_0119909_327_950 189
18 3300050491 nmdc:mga00v17_452924_c1 nmdc:mga00v17_452924_c1_189_788 189
19 3300050492 nmdc:mga0yw44_63227_c1 nmdc:mga0yw44_63227_c1_1280_1879 189
20 iso_pu_bacteria 2818991462 2819690197 189
21 iso_pu_bacteria 2854916844 2854918245 190
22 3300006946 Ga0079104_1002816 Ga0079104_10028162 191
23 3300006948 Ga0099826_10175287 Ga0099826_101752872 191
24 3300015261 Ga0182006_1041577 Ga0182006_10415773 191
25 3300027111 Ga0209281_1000202 Ga0209281_100020223 191
26 3300027666 Ga0209282_1153935 Ga0209282_11539352 191
27 iso_pu_bacteria 2954767861 2954769002 191
28 3300050493 nmdc:mga0k408_26694_c1 nmdc:mga0k408_26694_c1_2642_3262 193
29 iso_pu_bacteria 2818991469 2819726258 193
30 3300026116 Ga0207674_10327700 Ga0207674_103277001 194
31 3300044712 Ga0453684_0041165 Ga0453684_0041165_1769_2359 194
32 iso_pu_bacteria 2687453129 2687578764 194
33 3300031238 Ga0265332_10000015 Ga0265332_10000015165 195
34 iso_pu_bacteria 2651869719 2652545532 195
35 3300013102 Ga0157371_10000277 Ga0157371_1000027716 196
36 3300049589 Ga0501073_0023047 Ga0501073_0023047_2222_2854 196
37 iso_pu_bacteria 2740891818 2740990446 196
38 3300039062 Ga0400483_033934 Ga0400483_033934_334_933 197
39 3300039062 Ga0400483_228208 Ga0400483_228208_4673_5281 197
40 3300044712 Ga0453684_0053698 Ga0453684_0053698_1342_1971 197
41 iso_pu_bacteria 2643221603 2644029934 197
42 iso_pu_bacteria 2791355253 2793281262 197
43 iso_pu_bacteria 2808606373 2808904951 197
44 iso_pu_bacteria 640427133 640489073 197
45 iso_pu_bacteria 651053060 651177167 197
46 3300003791 Ga0055530_10004592 Ga0055530_100045926 198
47 3300005288 Ga0065714_10144353 Ga0065714_101443532 198
48 3300009011 Ga0105251_10001033 Ga0105251_100010333 198
49 3300012502 Ga0157347_1010374 Ga0157347_10103742 198
50 3300013100 Ga0157373_10001201 Ga0157373_1000120120 198
51 3300013105 Ga0157369_10023330 Ga0157369_100233307 198
52 3300027395 Ga0209996_1003350 Ga0209996_10033503 198
53 3300027471 Ga0209995_1020438 Ga0209995_10204381 198
54 3300027665 Ga0209983_1001258 Ga0209983_10012586 198
55 3300027682 Ga0209971_1001741 Ga0209971_10017413 198
56 3300030744 Ga0316181_1006671 Ga0316181_10066711 198
57 3300031824 Ga0307413_10110056 Ga0307413_101100562 198
58 3300037471 Ga0395905_0721983 Ga0395905_0721983_292_888 198
59 3300041405 Ga0439438_036650 Ga0439438_036650_528_1130 198
60 3300044658 Ga0466972_0168250 Ga0466972_0168250_84_683 198
61 3300045049 Ga0466959_0141115 Ga0466959_0141115_30_629 198
62 3300046457 Ga0495590_0105782 Ga0495590_0105782_80_682 198
63 3300046458 Ga0495591_017522 Ga0495591_017522_64_666 198
64 3300046463 Ga0495653_0043675 Ga0495653_0043675_2742_3344 198
65 3300046501 Ga0495607_0009993 Ga0495607_0009993_5657_6259 198
66 3300046512 Ga0495610_0007812 Ga0495610_0007812_6323_6925 198
67 3300046665 Ga0495661_0054812 Ga0495661_0054812_103_705 198
68 3300046810 Ga0495660_0133051 Ga0495660_0133051_109_711 198
69 3300047321 Ga0495676_0016895 Ga0495676_0016895_5721_6323 198
70 3300047446 Ga0495679_017006 Ga0495679_017006_1900_2502 198
71 3300049569 Ga0501032_0015855 Ga0501032_0015855_1889_2500 198
72 iso_pu_bacteria 2728369097 2729146218 198
73 3300005327 Ga0070658_10152500 Ga0070658_101525003 199
74 3300005329 Ga0070683_100719953 Ga0070683_1007199531 199
75 3300005336 Ga0070680_100372711 Ga0070680_1003727112 199
76 3300005458 Ga0070681_10182029 Ga0070681_101820292 199
77 3300005458 Ga0070681_10226521 Ga0070681_102265212 199
78 3300005530 Ga0070679_100028124 Ga0070679_1000281245 199
79 3300005539 Ga0068853_100220823 Ga0068853_1002208232 199
80 3300005548 Ga0070665_100001203 Ga0070665_10000120316 199
81 3300005614 Ga0068856_100188265 Ga0068856_1001882652 199
82 3300009093 Ga0105240_10056729 Ga0105240_100567295 199
83 3300009093 Ga0105240_10229184 Ga0105240_102291842 199
84 3300009093 Ga0105240_10332795 Ga0105240_103327953 199
85 3300009174 Ga0105241_10623929 Ga0105241_106239291 199
86 3300009545 Ga0105237_10378817 Ga0105237_103788172 199
87 3300009551 Ga0105238_10036745 Ga0105238_100367452 199
88 3300009551 Ga0105238_10117379 Ga0105238_101173794 199
89 3300013104 Ga0157370_10077567 Ga0157370_100775673 199
90 3300013104 Ga0157370_10143383 Ga0157370_101433832 199
91 3300025909 Ga0207705_10007175 Ga0207705_100071754 199
92 3300025912 Ga0207707_10246904 Ga0207707_102469043 199
93 3300025913 Ga0207695_10044340 Ga0207695_100443406 199
94 3300025917 Ga0207660_10458740 Ga0207660_104587401 199
95 3300025919 Ga0207657_10030762 Ga0207657_100307622 199
96 3300025921 Ga0207652_10052271 Ga0207652_100522715 199
97 3300025924 Ga0207694_10040599 Ga0207694_100405994 199
98 3300025924 Ga0207694_10048827 Ga0207694_100488273 199
99 3300025924 Ga0207694_10566242 Ga0207694_105662421 199
100 3300025932 Ga0207690_10858461 Ga0207690_108584611 199
101 3300025944 Ga0207661_10055260 Ga0207661_100552603 199
102 3300025949 Ga0207667_10108499 Ga0207667_101084993 199
103 3300026041 Ga0207639_10229312 Ga0207639_102293122 199
104 3300026078 Ga0207702_10539469 Ga0207702_105394692 199
105 3300028379 Ga0268266_10002387 Ga0268266_100023875 199
106 3300045051 Ga0451576_0006875 Ga0451576_0006875_6467_7069 199
107 3300045976 Ga0466967_0617267 Ga0466967_0617267_244_846 199
108 3300009092 Ga0105250_10092378 Ga0105250_100923781 200
109 3300041997 Ga0439431_0108216 Ga0439431_0108216_53_661 200
110 3300042000 Ga0439437_001970 Ga0439437_001970_188_796 200
111 3300042013 Ga0439456_004242 Ga0439456_004242_515_1123 200
112 3300042115 Ga0450911_000026 Ga0450911_000026_21284_21892 200
113 3300042138 Ga0450903_023506 Ga0450903_023506_112_720 200
114 3300042139 Ga0450904_000063 Ga0450904_000063_2767_3375 200
115 3300042156 Ga0439446_0016578 Ga0439446_0016578_1189_1797 200
116 3300042438 Ga0439459_0005878 Ga0439459_0005878_838_1446 200
117 3300042530 Ga0450916_000591 Ga0450916_000591_1079_1687 200
118 3300042532 Ga0450893_0004351 Ga0450893_0004351_580_1188 200
119 3300047472 Ga0495686_0004841 Ga0495686_0004841_903_1532 200
120 3300048913 Ga0496110_0036988 Ga0496110_0036988_2921_3613 200
121 3300049571 Ga0501034_0643665 Ga0501034_0643665_59_667 200
122 3300049853 Ga0501226_000005 Ga0501226_000005_56876_57484 200
123 3300053087 Ga0500643_000026 Ga0500643_000026_225503_226108 200
124 3300025297 Ga0209758_1033986 Ga0209758_10339862 201
125 3300032004 Ga0307414_10047249 Ga0307414_100472492 201
126 3300041405 Ga0439438_003549 Ga0439438_003549_128_817 201
127 3300041405 Ga0439438_004978 Ga0439438_004978_114_803 201
128 3300046522 Ga0495643_0005575 Ga0495643_0005575_178_864 201
129 3300048924 Ga0496121_0000380 Ga0496121_0000380_51141_51767 201
130 3300050492 nmdc:mga0yw44_1911_c1 nmdc:mga0yw44_1911_c1_333_941 201
131 iso_pu_bacteria 2523533628 2524000907 201
132 iso_pu_bacteria 2643221622 2644127171 201
133 iso_pu_bacteria 2904765812 2904768516 201
134 iso_pu_bacteria 2904770941 2904772212 201
135 iso_pu_bacteria 2908811453 2908815871 201
136 iso_pu_bacteria 2919420072 2919421891 201
137 iso_pu_bacteria 2919432681 2919434551 201
138 3300005563 Ga0068855_100036034 Ga0068855_1000360345 202
139 3300009545 Ga0105237_10697001 Ga0105237_106970012 202
140 3300025298 Ga0209050_1000402 Ga0209050_100040270 202
141 3300031727 Ga0316576_10177783 Ga0316576_101777831 202
142 3300036712 Ga0316584_0008920 Ga0316584_0008920_2685_3311 202
143 3300045049 Ga0466959_0189823 Ga0466959_0189823_96_710 202
144 3300048924 Ga0496121_0075177 Ga0496121_0075177_1161_1781 202
145 3300053108 Ga0500562_103197 Ga0500562_103197_50_667 202
146 iso_pu_bacteria 2599185236 2599723103 203
147 iso_pu_bacteria 2600254933 2600375236 203
148 iso_pu_bacteria 2818991461 2819684170 203
149 iso_pu_bacteria 2854896431 2854897136 203
150 3300005328 Ga0070676_10463317 Ga0070676_104633171 204
151 3300005457 Ga0070662_100205951 Ga0070662_1002059512 204
152 3300005459 Ga0068867_100034598 Ga0068867_1000345982 204
153 3300006177 Ga0075362_10007235 Ga0075362_100072351 204
154 3300006178 Ga0075367_10103156 Ga0075367_101031562 204
155 3300006195 Ga0075366_10022610 Ga0075366_100226104 204
156 3300006881 Ga0068865_100099805 Ga0068865_1000998053 204
157 3300009148 Ga0105243_10095300 Ga0105243_100953003 204
158 3300025907 Ga0207645_10149532 Ga0207645_101495322 204
159 3300031616 Ga0307508_10049849 Ga0307508_100498492 204
160 3300031730 Ga0307516_10100638 Ga0307516_101006383 204
161 3300039450 Ga0436363_0601723 Ga0436363_0601723_429_1064 204
162 3300042007 Ga0439449_0000091 Ga0439449_0000091_20222_20851 204
163 3300042436 Ga0439435_0070023 Ga0439435_0070023_346_975 204
164 3300046660 Ga0495625_0384678 Ga0495625_0384678_150_788 204
165 3300046692 Ga0495671_0009679 Ga0495671_0009679_4461_5099 204
166 3300047472 Ga0495686_0002628 Ga0495686_0002628_7030_7659 204
167 3300050493 nmdc:mga0k408_3111_c1 nmdc:mga0k408_3111_c1_4484_5113 204
168 3300050494 nmdc:mga06z11_170890_c1 nmdc:mga06z11_170890_c1_524_1183 204
169 3300050496 nmdc:mga07m45_215943_c1 nmdc:mga07m45_215943_c1_410_1036 204
170 iso_pu_bacteria 2904449895 2904452559 204
171 iso_pu_bacteria 2904456579 2904460842 204
172 iso_pu_bacteria 2929520902 2929522808 204
173 3300005336 Ga0070680_100241178 Ga0070680_1002411782 205
174 3300005458 Ga0070681_10136871 Ga0070681_101368712 205
175 3300005467 Ga0070706_100101732 Ga0070706_1001017324 205
176 3300005530 Ga0070679_100070713 Ga0070679_1000707133 205
177 3300005563 Ga0068855_100277038 Ga0068855_1002770382 205
178 3300006178 Ga0075367_10005138 Ga0075367_100051383 205
179 3300006195 Ga0075366_10026247 Ga0075366_100262473 205
180 3300006353 Ga0075370_10012187 Ga0075370_100121873 205
181 3300007076 Ga0075435_100401810 Ga0075435_1004018102 205
182 3300025910 Ga0207684_10002166 Ga0207684_1000216615 205
183 3300025912 Ga0207707_10079556 Ga0207707_100795562 205
184 3300025917 Ga0207660_10318395 Ga0207660_103183952 205
185 3300037466 Ga0395898_0100363 Ga0395898_0100363_740_1369 205
186 3300037466 Ga0395898_0187190 Ga0395898_0187190_1008_1637 205
187 3300045051 Ga0451576_1357009 Ga0451576_1357009_41_658 205
188 3300048928 Ga0496125_0093253 Ga0496125_0093253_276_902 205
189 3300050493 nmdc:mga0k408_57566_c1 nmdc:mga0k408_57566_c1_1119_1754 205
190 3300050516 nmdc:mga0sz30_76250_c1 nmdc:mga0sz30_76250_c1_240_875 205
191 3300005356 Ga0070674_100392360 Ga0070674_1003923602 206
192 3300006042 Ga0075368_10041340 Ga0075368_100413403 206
193 3300006048 Ga0075363_100022545 Ga0075363_1000225453 206
194 3300006177 Ga0075362_10021011 Ga0075362_100210113 206
195 3300006178 Ga0075367_10100008 Ga0075367_101000082 206
196 3300006186 Ga0075369_10001037 Ga0075369_100010372 206
197 3300006353 Ga0075370_10028162 Ga0075370_100281623 206
198 3300025937 Ga0207669_10068722 Ga0207669_100687222 206
199 3300042876 Ga0451577_0176317 Ga0451577_0176317_281_949 206
200 3300044712 Ga0453684_0258898 Ga0453684_0258898_976_1620 206
201 3300045051 Ga0451576_0105205 Ga0451576_0105205_871_1521 206
202 3300046519 Ga0495632_0006177 Ga0495632_0006177_2118_2759 206
203 3300046542 Ga0495597_0041243 Ga0495597_0041243_38_679 206
204 3300046648 Ga0495611_0107938 Ga0495611_0107938_123_764 206
205 3300046660 Ga0495625_0129371 Ga0495625_0129371_279_920 206
206 3300046694 Ga0495649_0026031 Ga0495649_0026031_585_1226 206
207 3300047443 Ga0495687_002995 Ga0495687_002995_4942_5655 206
208 3300047443 Ga0495687_007052 Ga0495687_007052_5308_5949 206
209 3300048920 Ga0496117_0106688 Ga0496117_0106688_530_1162 206
210 3300050489 nmdc:mga03683_52866_c1 nmdc:mga03683_52866_c1_273_914 206
211 3300050490 nmdc:mga03n38_114731_c1 nmdc:mga03n38_114731_c1_345_986 206
212 3300050492 nmdc:mga0yw44_93362_c1 nmdc:mga0yw44_93362_c1_1000_1641 206
213 3300050494 nmdc:mga06z11_113243_c1 nmdc:mga06z11_113243_c1_249_890 206
214 3300050495 nmdc:mga04h51_47497_c1 nmdc:mga04h51_47497_c1_75_716 206
215 3300050496 nmdc:mga07m45_18434_c1 nmdc:mga07m45_18434_c1_3093_3749 206
216 3300050496 nmdc:mga07m45_396889_c1 nmdc:mga07m45_396889_c1_34_675 206
217 3300050516 nmdc:mga0sz30_4577_c2 nmdc:mga0sz30_4577_c2_653_1294 206
218 3300053093 Ga0500651_0084856 Ga0500651_0084856_331_972 206
219 3300003215 JGI25153J46596_10003893 JGI25153J46596_100038932 207
220 3300005367 Ga0070667_100153399 Ga0070667_1001533992 207
221 3300005455 Ga0070663_100078436 Ga0070663_1000784363 207
222 3300005548 Ga0070665_100049447 Ga0070665_1000494477 207
223 3300005548 Ga0070665_100120572 Ga0070665_1001205722 207
224 3300005616 Ga0068852_100043566 Ga0068852_1000435663 207
225 3300006038 Ga0075365_10101227 Ga0075365_101012272 207
226 3300006051 Ga0075364_10026160 Ga0075364_100261606 207
227 3300006177 Ga0075362_10003000 Ga0075362_100030002 207
228 3300006178 Ga0075367_10013647 Ga0075367_100136472 207
229 3300006186 Ga0075369_10051546 Ga0075369_100515462 207
230 3300006353 Ga0075370_10009326 Ga0075370_100093265 207
231 3300009098 Ga0105245_10586357 Ga0105245_105863572 207
232 3300009545 Ga0105237_10013848 Ga0105237_100138486 207
233 3300025914 Ga0207671_10064098 Ga0207671_100640983 207
234 3300025933 Ga0207706_10044280 Ga0207706_100442802 207
235 3300025942 Ga0207689_10442096 Ga0207689_104420962 207
236 3300025949 Ga0207667_10997965 Ga0207667_109979651 207
237 3300026067 Ga0207678_10089868 Ga0207678_100898683 207
238 3300026089 Ga0207648_10098164 Ga0207648_100981643 207
239 3300026116 Ga0207674_10054138 Ga0207674_100541385 207
240 3300028379 Ga0268266_10031649 Ga0268266_100316493 207
241 3300030731 Ga0316177_1028638 Ga0316177_10286382 207
242 3300030742 Ga0316183_1044753 Ga0316183_10447532 207
243 3300030745 Ga0316182_1006463 Ga0316182_10064632 207
244 3300032004 Ga0307414_10057440 Ga0307414_100574403 207
245 3300041452 Ga0451793_1391072 Ga0451793_1391072_142_810 207
246 3300046501 Ga0495607_0085596 Ga0495607_0085596_684_1307 207
247 3300046522 Ga0495643_0078560 Ga0495643_0078560_195_845 207
248 3300048913 Ga0496110_0112042 Ga0496110_0112042_179_802 207
249 3300048914 Ga0496111_0000441 Ga0496111_0000441_2715_3338 207
250 3300048924 Ga0496121_0004305 Ga0496121_0004305_7830_8453 207
251 3300048925 Ga0496122_0015324 Ga0496122_0015324_2438_3061 207
252 3300050489 nmdc:mga03683_5784_c1 nmdc:mga03683_5784_c1_2068_2727 207
253 3300050491 nmdc:mga00v17_20359_c1 nmdc:mga00v17_20359_c1_3102_3725 207
254 3300050494 nmdc:mga06z11_164174_c1 nmdc:mga06z11_164174_c1_97_756 207
255 3300050496 nmdc:mga07m45_30377_c1 nmdc:mga07m45_30377_c1_1626_2285 207
256 3300050496 nmdc:mga07m45_338969_c1 nmdc:mga07m45_338969_c1_122_781 207
257 3300053139 Ga0500568_0028992 Ga0500568_0028992_720_1364 207
258 3300053140 Ga0500573_0014476 Ga0500573_0014476_1889_2515 207

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01810

LysE

LysE type translocator

42

230

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vcf-assembly1.cif.gz_A cryo-em structure of chlamydomonas toc-tic supercomplex 0.5313 6 198
7vcf-assembly1.cif.gz_A cryo-em structure of chlamydomonas toc-tic supercomplex 0.5019 6 198
6kkl-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward conformation (h115n mutant) 0.4371 6 200
8jt9-assembly1.cif.gz_A human vmat2 complex with ketanserin 0.4283 15 201
8jta-assembly1.cif.gz_A human vmat2 complex with tetrabenazine 0.4245 19 201
ID Description Score Start End Superfamily
af_P67127_16_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.638 12 199 1.20.1250.20
af_P67127_16_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.6214 12 199 1.20.1250.20
af_P76264_30_182_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5497 25 199 1.20.1250.20
af_Q2R4J1_1_279_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.546 3 201 1.20.1250.20
af_P76264_30_182_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5368 25 199 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A3B9IMC7-F1-model_v4 Amino acid transporter 0.9697 1 205 GO:0005886
GO:0015171
AF-A0A4P8GNQ9-F1-model_v4 Amino acid transporter 0.9678 3 200 GO:0005886
GO:0015171
AF-A0A7W9ZHF8-F1-model_v4 L-lysine exporter family protein LysE/ArgO 0.9668 5 204 GO:0005886
GO:0015171
AF-A0A1H7K9V9-F1-model_v4 L-lysine exporter family protein LysE/ArgO 0.9666 3 200 GO:0005886
GO:0015171
AF-A0A255HHC8-F1-model_v4 Amino acid transporter 0.9657 2 200 GO:0005886
GO:0015171

Feature Viewer

pLDDT pTM Quality
83.48 0.75 High
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Predicted Structure (AlphaFold2)

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