F368176

General Info

Members Datasets Scaffolds Average Seq Length
258 135 516 434

Family's Representative Sequence

Representative Sequence 3300031240|Ga0265320_10034412|Ga0265320_100344122
Length 484
Sequence MTKPSKERSAKKQKAPMALEPAAPSLSSGQRTAAPRHDGHGKSRAGRGPAGQEKQGRRRPAAGRNAPVTKSQEKARLTQPGARVNRRAADRLRGGHLWVYASDVEAIETGEGEAPALLPVADSRGLLLGTALYSPTSQIALRMVARELIDETQWLKLVEERLGAAIERRRPMLDDGTDAVRLCFSEADELPGLVADKYGEIVVLQRLARGLGTHAFSEACVRVLRERLKPASILERPDPRIRELEGLEAPAAAPLWAADKENPAIKTQFLLNGLRFQFDGNAGQKTGAFLDQRMNYAAAKDWAKRLGATGRALDVCTYQGGFALHLAQVCKSVTGIDASRSSLEVAEQNLQANKAQLRADVDWVEGDAFQILRDWSEAGEKFNTIVLDPPAFAKSKRAVEGALRGYKELNLRALKMLEPGGLLVTCSCSHHVSWVDLEGAVAAAAADAGRRVRLHERRGAAPDHPVVLNLPETEYLKCLVLEVE

Samples

Sample ID Description Type Environment
1 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
59 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
90 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
91 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
92 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
93 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
94 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
95 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
96 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
97 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
98 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
99 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
100 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
101 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
102 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
103 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
109 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
110 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
116 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
117 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
118 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
119 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
120 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
121 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
122 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
123 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
127 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
130 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
135 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 5.43
Rhizosphere 93.8
Stem 0
Stem Tuber 0
Unclassified 8.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265320_10034412 3300031240 Unclassified 2577
2 Ga0070683_100000105 3300005329 Bacteria 54897
3 Ga0070683_100012257 3300005329 Bacteria 7444
4 Ga0070683_100013865 3300005329 Bacteria 7039
5 Ga0070670_100003407 3300005331 Bacteria 13184
6 Ga0068869_100012472 3300005334 Bacteria 5618
7 Ga0070666_10050395 3300005335 Unclassified 2800
8 Ga0068868_100051989 3300005338 Bacteria 3225
9 Ga0070660_100006383 3300005339 Bacteria 8170
10 Ga0070661_100006679 3300005344 Bacteria 7957
11 Ga0070661_100049033 3300005344 Bacteria 3092
12 Ga0070671_100063292 3300005355 Bacteria 3080
13 Ga0070659_100138844 3300005366 Bacteria 1978
14 Ga0070667_100002865 3300005367 Bacteria 14881
15 Ga0070714_100012089 3300005435 Bacteria 6874
16 Ga0070713_100127166 3300005436 Bacteria 2243
17 Ga0070711_100050141 3300005439 Bacteria 2861
18 Ga0070708_100075691 3300005445 Unclassified 3039
19 Ga0070706_100048035 3300005467 Bacteria 3940
20 Ga0070707_100000061 3300005468 Bacteria 96966
21 Ga0070698_100012654 3300005471 Bacteria 8934
22 Ga0070679_100013125 3300005530 Bacteria 7933
23 Ga0070679_100164614 3300005530 Bacteria 2192
24 Ga0070684_100024698 3300005535 Bacteria 5043
25 Ga0070697_100014712 3300005536 Bacteria 6144
26 Ga0070697_100034226 3300005536 Unclassified 4096
27 Ga0068853_100000415 3300005539 Bacteria 29266
28 Ga0068853_100053597 3300005539 Bacteria 3473
29 Ga0070686_100074609 3300005544 Bacteria 2229
30 Ga0070665_100043613 3300005548 Bacteria 4507
31 Ga0068855_100000813 3300005563 Bacteria 38637
32 Ga0068855_100001805 3300005563 Bacteria 26734
33 Ga0068855_100041776 3300005563 Bacteria 5433
34 Ga0068855_100059797 3300005563 Bacteria 4458
35 Ga0068855_100188700 3300005563 Unclassified 2326
36 Ga0068857_100007964 3300005577 Bacteria 9148
37 Ga0068857_100008882 3300005577 Bacteria 8703
38 Ga0068854_100009913 3300005578 Bacteria 6163
39 Ga0068856_100001375 3300005614 Bacteria 25577
40 Ga0068856_100016534 3300005614 Bacteria 7141
41 Ga0068856_100023631 3300005614 Bacteria 5977
42 Ga0068856_100029768 3300005614 Bacteria 5335
43 Ga0068856_100038952 3300005614 Bacteria 4667
44 Ga0068856_100039713 3300005614 Bacteria 4620
45 Ga0068852_100000078 3300005616 Bacteria 68720
46 Ga0068852_100000115 3300005616 Bacteria 54428
47 Ga0068852_100017774 3300005616 Bacteria 5588
48 Ga0068852_100068918 3300005616 Bacteria 3098
49 Ga0068864_100006119 3300005618 Bacteria 9873
50 Ga0068851_10012290 3300005834 Bacteria 4032
51 Ga0068863_100028829 3300005841 Bacteria 5301
52 Ga0068858_100018159 3300005842 Bacteria 6589
53 Ga0068862_100080132 3300005844 Bacteria 2831
54 Ga0081540_1002179 3300005983 Bacteria 16208
55 Ga0097621_100000479 3300006237 Bacteria 28064
56 Ga0097621_100023937 3300006237 Bacteria 4760
57 Ga0068871_100000522 3300006358 Bacteria 26338
58 Ga0068871_100015890 3300006358 Bacteria 5652
59 Ga0105240_10000065 3300009093 Bacteria 213992
60 Ga0105240_10002805 3300009093 Bacteria 27528
61 Ga0105240_10004329 3300009093 Bacteria 21676
62 Ga0105240_10005360 3300009093 Bacteria 19136
63 Ga0105240_10020103 3300009093 Bacteria 8914
64 Ga0105240_10021458 3300009093 Bacteria 8588
65 Ga0105245_10001334 3300009098 Bacteria 22330
66 Ga0105245_10028053 3300009098 Bacteria 4962
67 Ga0105243_10096473 3300009148 Bacteria 2446
68 Ga0105241_10000043 3300009174 Bacteria 105124
69 Ga0105241_10000656 3300009174 Bacteria 25958
70 Ga0105241_10018553 3300009174 Bacteria 5118
71 Ga0105241_10030465 3300009174 Bacteria 4032
72 Ga0105248_10000049 3300009177 Bacteria 153741
73 Ga0105237_10001357 3300009545 Bacteria 32399
74 Ga0105237_10058679 3300009545 Bacteria 3851
75 Ga0105237_10061767 3300009545 Unclassified 3745
76 Ga0105238_10000383 3300009551 Bacteria 47415
77 Ga0105238_10002496 3300009551 Bacteria 18412
78 Ga0105238_10012433 3300009551 Bacteria 8585
79 Ga0105238_10035603 3300009551 Bacteria 5061
80 Ga0105238_10048023 3300009551 Bacteria 4302
81 Ga0105249_10195893 3300009553 Bacteria 1975
82 Ga0105239_10000737 3300010375 Bacteria 46497
83 Ga0105239_10042008 3300010375 Bacteria 5009
84 Ga0105239_10149622 3300010375 Bacteria 2605
85 Ga0105246_10000591 3300011119 Bacteria 20120
86 Ga0157370_10038288 3300013104 Bacteria 4639
87 Ga0157369_10000022 3300013105 Bacteria 233081
88 Ga0157369_10000182 3300013105 Bacteria 87266
89 Ga0157369_10001143 3300013105 Bacteria 33113
90 Ga0157369_10007234 3300013105 Bacteria 12786
91 Ga0157369_10021513 3300013105 Bacteria 7215
92 Ga0157369_10043356 3300013105 Bacteria 4904
93 Ga0157369_10209464 3300013105 Bacteria 2044
94 Ga0157374_10000840 3300013296 Bacteria 26836
95 Ga0157374_10003796 3300013296 Bacteria 12712
96 Ga0157374_10017278 3300013296 Bacteria 6349
97 Ga0157374_10081657 3300013296 Bacteria 3068
98 Ga0157374_10187796 3300013296 Bacteria 2021
99 Ga0157378_10080795 3300013297 Bacteria 2937
100 Ga0157372_10000192 3300013307 Bacteria 67358
101 Ga0157372_10010433 3300013307 Bacteria 9880
102 Ga0157372_10050442 3300013307 Bacteria 4629
103 Ga0157372_10107762 3300013307 Bacteria 3188
104 Ga0157372_10112931 3300013307 Bacteria 3113
105 Ga0157375_10001543 3300013308 Bacteria 19821
106 Ga0157375_10056832 3300013308 Unclassified 3866
107 Ga0163163_10002792 3300014325 Bacteria 14753
108 Ga0163163_10069871 3300014325 Bacteria 3497
109 Ga0157380_10010742 3300014326 Bacteria 6598
110 Ga0157379_10019096 3300014968 Bacteria 6052
111 Ga0157376_10005386 3300014969 Bacteria 8945
112 Ga0157376_10009855 3300014969 Bacteria 6964
113 Ga0157376_10020675 3300014969 Bacteria 5099
114 Ga0157376_10082525 3300014969 Bacteria 2762
115 Ga0213872_10005473 3300021361 Bacteria 6527
116 Ga0207656_10080155 3300025321 Bacteria 1466
117 Ga0207680_10045080 3300025903 Unclassified 2598
118 Ga0207647_10034297 3300025904 Bacteria 3241
119 Ga0207705_10069904 3300025909 Unclassified 2543
120 Ga0207654_10000019 3300025911 Bacteria 171031
121 Ga0207654_10000101 3300025911 Bacteria 56442
122 Ga0207654_10008563 3300025911 Bacteria 5180
123 Ga0207695_10000052 3300025913 Bacteria 398089
124 Ga0207695_10000188 3300025913 Bacteria 178721
125 Ga0207695_10000332 3300025913 Bacteria 112161
126 Ga0207695_10000989 3300025913 Bacteria 50393
127 Ga0207695_10055020 3300025913 Bacteria 4150
128 Ga0207695_10056387 3300025913 Bacteria 4088
129 Ga0207695_10069024 3300025913 Bacteria 3619
130 Ga0207695_10209940 3300025913 Bacteria 1858
131 Ga0207671_10000449 3300025914 Bacteria 56932
132 Ga0207671_10020352 3300025914 Bacteria 5053
133 Ga0207657_10006210 3300025919 Bacteria 12420
134 Ga0207649_10000971 3300025920 Bacteria 17772
135 Ga0207649_10035241 3300025920 Bacteria 3006
136 Ga0207652_10038380 3300025921 Bacteria 4060
137 Ga0207652_10132003 3300025921 Bacteria 2228
138 Ga0207646_10000102 3300025922 Bacteria 114751
139 Ga0207646_10022701 3300025922 Bacteria 5774
140 Ga0207694_10000102 3300025924 Bacteria 94003
141 Ga0207694_10000773 3300025924 Bacteria 28699
142 Ga0207694_10012434 3300025924 Bacteria 6416
143 Ga0207694_10013913 3300025924 Bacteria 6066
144 Ga0207694_10189721 3300025924 Bacteria 1669
145 Ga0207650_10001758 3300025925 Bacteria 15364
146 Ga0207687_10005512 3300025927 Bacteria 8374
147 Ga0207700_10002330 3300025928 Bacteria 10889
148 Ga0207644_10037733 3300025931 Bacteria 3401
149 Ga0207711_10000033 3300025941 Bacteria 193513
150 Ga0207689_10005257 3300025942 Bacteria 11606
151 Ga0207661_10009255 3300025944 Bacteria 7058
152 Ga0207661_10053516 3300025944 Bacteria 3230
153 Ga0207661_10089647 3300025944 Bacteria 2559
154 Ga0207667_10000442 3300025949 Bacteria 55598
155 Ga0207667_10002869 3300025949 Bacteria 21396
156 Ga0207667_10003424 3300025949 Bacteria 19584
157 Ga0207667_10007985 3300025949 Bacteria 12626
158 Ga0207667_10071095 3300025949 Unclassified 3619
159 Ga0207712_10017879 3300025961 Bacteria 4612
160 Ga0207640_10008158 3300025981 Bacteria 5800
161 Ga0207658_10013256 3300025986 Bacteria 5629
162 Ga0207677_10005245 3300026023 Bacteria 7017
163 Ga0207639_10000027 3300026041 Bacteria 197829
164 Ga0207702_10000307 3300026078 Bacteria 55978
165 Ga0207702_10017535 3300026078 Bacteria 5923
166 Ga0207702_10100846 3300026078 Unclassified 2548
167 Ga0207674_10001941 3300026116 Bacteria 26256
168 Ga0207674_10017722 3300026116 Bacteria 7761
169 Ga0207674_10040588 3300026116 Bacteria 4820
170 Ga0207698_10000007 3300026142 Bacteria 289457
171 Ga0207698_10000123 3300026142 Bacteria 48520
172 Ga0207698_10026347 3300026142 Bacteria 4112
173 Ga0207698_10062499 3300026142 Bacteria 2908
174 Ga0268266_10052333 3300028379 Bacteria 3506
175 Ga0268264_10000765 3300028381 Bacteria 35738
176 Ga0265318_10000914 3300028577 Bacteria 19254
177 Ga0265318_10005675 3300028577 Bacteria 5840
178 Ga0265336_10012471 3300028666 Bacteria 2861
179 Ga0265338_10004884 3300028800 Bacteria 17858
180 Ga0265338_10015558 3300028800 Bacteria 8340
181 Ga0265338_10035654 3300028800 Bacteria 4774
182 Ga0265338_10087671 3300028800 Unclassified 2585
183 Ga0265330_10000309 3300031235 Bacteria 35085
184 Ga0265332_10001665 3300031238 Bacteria 12144
185 Ga0265332_10049172 3300031238 Bacteria 1814
186 Ga0265328_10011160 3300031239 Bacteria 3597
187 Ga0265320_10007494 3300031240 Bacteria 6771
188 Ga0265320_10009269 3300031240 Bacteria 5950
189 Ga0265325_10000322 3300031241 Bacteria 33728
190 Ga0265325_10001965 3300031241 Bacteria 14163
191 Ga0265325_10005584 3300031241 Bacteria 7758
192 Ga0265325_10010449 3300031241 Bacteria 5375
193 Ga0265340_10000212 3300031247 Bacteria 29604
194 Ga0265340_10041502 3300031247 Unclassified 2261
195 Ga0265339_10000076 3300031249 Bacteria 85094
196 Ga0265339_10000361 3300031249 Bacteria 35945
197 Ga0265339_10000699 3300031249 Bacteria 26011
198 Ga0265339_10001440 3300031249 Bacteria 17656
199 Ga0265339_10001974 3300031249 Bacteria 15082
200 Ga0265331_10014518 3300031250 Bacteria 4192
201 Ga0265316_10001875 3300031344 Bacteria 22068
202 Ga0265316_10004467 3300031344 Bacteria 13918
203 Ga0265316_10004857 3300031344 Bacteria 13251
204 Ga0265316_10012462 3300031344 Bacteria 7623
205 Ga0265313_10001182 3300031595 Bacteria 24959
206 Ga0265313_10018878 3300031595 Bacteria 3858
207 Ga0265313_10032777 3300031595 Unclassified 2647
208 Ga0265314_10000131 3300031711 Bacteria 113375
209 Ga0265314_10011032 3300031711 Bacteria 7493
210 Ga0265342_10003338 3300031712 Bacteria 13252
211 Ga0265342_10006746 3300031712 Bacteria 8505
212 Ga0265342_10013933 3300031712 Bacteria 5362
213 Ga0265342_10022629 3300031712 Unclassified 3992
214 Ga0265342_10034171 3300031712 Bacteria 3121
215 Ga0265342_10068509 3300031712 Unclassified 2073
216 Ga0373956_0057000 3300035119 Bacteria 1765
217 Ga0373935_0012356 3300035692 Bacteria 5137
218 Ga0373927_0088546 3300035695 Bacteria 2010
219 Ga0373927_0095841 3300035695 Unclassified 1929
220 Ga0373937_0009907 3300036401 Bacteria 8308
221 Ga0373925_0032946 3300037068 Bacteria 3817
222 Ga0436361_0128003 3300039447 Bacteria 8766
223 Ga0453683_0010453 3300044673 Bacteria 6150
224 Ga0453683_0035257 3300044673 Bacteria 3153
225 Ga0466961_0030674 3300044693 Bacteria 3455
226 Ga0453684_0145721 3300044712 Bacteria 2821
227 Ga0453684_0301003 3300044712 Bacteria 1823
228 Ga0466959_0084707 3300045049 Bacteria 2282
229 Ga0451576_0109898 3300045051 Unclassified 2869
230 Ga0466967_0027315 3300045976 Bacteria 4746
231 Ga0466967_0122419 3300045976 Unclassified 2406
232 Ga0495629_0028001 3300046459 Bacteria 4002
233 Ga0495629_0066681 3300046459 Bacteria 2512
234 Ga0495580_0011437 3300046472 Bacteria 6866
235 Ga0495594_0005191 3300046499 Bacteria 6693
236 Ga0495594_0010078 3300046499 Bacteria 4894
237 Ga0495635_0038334 3300046663 Bacteria 3318
238 Ga0495657_0033358 3300046675 Bacteria 3585
239 Ga0495676_0071594 3300047321 Unclassified 2665
240 Ga0495602_0133468 3300048088 Unclassified 1976
241 Ga0496100_0026093 3300048903 Bacteria 3579
242 Ga0496101_0279581 3300048904 Bacteria 1304
243 Ga0496103_0093274 3300048906 Bacteria 1901
244 Ga0496104_0032995 3300048907 Bacteria 4820
245 Ga0496104_0219772 3300048907 Bacteria 1812
246 Ga0496105_0029252 3300048908 Bacteria 4509
247 Ga0496105_0089022 3300048908 Bacteria 2550
248 Ga0496106_0037318 3300048909 Bacteria 3635
249 Ga0496108_0126145 3300048911 Bacteria 2197
250 Ga0496111_0037761 3300048914 Bacteria 3458
251 Ga0496113_0143105 3300048916 Bacteria 1882
252 Ga0496114_0014975 3300048917 Bacteria 6234
253 Ga0496115_0017606 3300048918 Bacteria 5469
254 Ga0496115_0033009 3300048918 Bacteria 4085
255 Ga0496126_0006038 3300048929 Bacteria 13595
256 Ga0496126_0013928 3300048929 Bacteria 8159
257 Ga0495595_0072171 3300053084 Unclassified 1633
258 Ga0495619_0105292 3300053085 Bacteria 1923
259 Ga0265320_10034412
260 Ga0070683_100000105
261 Ga0070683_100012257
262 Ga0070683_100013865
263 Ga0070670_100003407
264 Ga0068869_100012472
265 Ga0070666_10050395
266 Ga0068868_100051989
267 Ga0070660_100006383
268 Ga0070661_100006679
269 Ga0070661_100049033
270 Ga0070671_100063292
271 Ga0070659_100138844
272 Ga0070667_100002865
273 Ga0070714_100012089
274 Ga0070713_100127166
275 Ga0070711_100050141
276 Ga0070708_100075691
277 Ga0070706_100048035
278 Ga0070707_100000061
279 Ga0070698_100012654
280 Ga0070679_100013125
281 Ga0070679_100164614
282 Ga0070684_100024698
283 Ga0070697_100014712
284 Ga0070697_100034226
285 Ga0068853_100000415
286 Ga0068853_100053597
287 Ga0070686_100074609
288 Ga0070665_100043613
289 Ga0068855_100000813
290 Ga0068855_100001805
291 Ga0068855_100041776
292 Ga0068855_100059797
293 Ga0068855_100188700
294 Ga0068857_100007964
295 Ga0068857_100008882
296 Ga0068854_100009913
297 Ga0068856_100001375
298 Ga0068856_100016534
299 Ga0068856_100023631
300 Ga0068856_100029768
301 Ga0068856_100038952
302 Ga0068856_100039713
303 Ga0068852_100000078
304 Ga0068852_100000115
305 Ga0068852_100017774
306 Ga0068852_100068918
307 Ga0068864_100006119
308 Ga0068851_10012290
309 Ga0068863_100028829
310 Ga0068858_100018159
311 Ga0068862_100080132
312 Ga0081540_1002179
313 Ga0097621_100000479
314 Ga0097621_100023937
315 Ga0068871_100000522
316 Ga0068871_100015890
317 Ga0105240_10000065
318 Ga0105240_10002805
319 Ga0105240_10004329
320 Ga0105240_10005360
321 Ga0105240_10020103
322 Ga0105240_10021458
323 Ga0105245_10001334
324 Ga0105245_10028053
325 Ga0105243_10096473
326 Ga0105241_10000043
327 Ga0105241_10000656
328 Ga0105241_10018553
329 Ga0105241_10030465
330 Ga0105248_10000049
331 Ga0105237_10001357
332 Ga0105237_10058679
333 Ga0105237_10061767
334 Ga0105238_10000383
335 Ga0105238_10002496
336 Ga0105238_10012433
337 Ga0105238_10035603
338 Ga0105238_10048023
339 Ga0105249_10195893
340 Ga0105239_10000737
341 Ga0105239_10042008
342 Ga0105239_10149622
343 Ga0105246_10000591
344 Ga0157370_10038288
345 Ga0157369_10000022
346 Ga0157369_10000182
347 Ga0157369_10001143
348 Ga0157369_10007234
349 Ga0157369_10021513
350 Ga0157369_10043356
351 Ga0157369_10209464
352 Ga0157374_10000840
353 Ga0157374_10003796
354 Ga0157374_10017278
355 Ga0157374_10081657
356 Ga0157374_10187796
357 Ga0157378_10080795
358 Ga0157372_10000192
359 Ga0157372_10010433
360 Ga0157372_10050442
361 Ga0157372_10107762
362 Ga0157372_10112931
363 Ga0157375_10001543
364 Ga0157375_10056832
365 Ga0163163_10002792
366 Ga0163163_10069871
367 Ga0157380_10010742
368 Ga0157379_10019096
369 Ga0157376_10005386
370 Ga0157376_10009855
371 Ga0157376_10020675
372 Ga0157376_10082525
373 Ga0213872_10005473
374 Ga0207656_10080155
375 Ga0207680_10045080
376 Ga0207647_10034297
377 Ga0207705_10069904
378 Ga0207654_10000019
379 Ga0207654_10000101
380 Ga0207654_10008563
381 Ga0207695_10000052
382 Ga0207695_10000188
383 Ga0207695_10000332
384 Ga0207695_10000989
385 Ga0207695_10055020
386 Ga0207695_10056387
387 Ga0207695_10069024
388 Ga0207695_10209940
389 Ga0207671_10000449
390 Ga0207671_10020352
391 Ga0207657_10006210
392 Ga0207649_10000971
393 Ga0207649_10035241
394 Ga0207652_10038380
395 Ga0207652_10132003
396 Ga0207646_10000102
397 Ga0207646_10022701
398 Ga0207694_10000102
399 Ga0207694_10000773
400 Ga0207694_10012434
401 Ga0207694_10013913
402 Ga0207694_10189721
403 Ga0207650_10001758
404 Ga0207687_10005512
405 Ga0207700_10002330
406 Ga0207644_10037733
407 Ga0207711_10000033
408 Ga0207689_10005257
409 Ga0207661_10009255
410 Ga0207661_10053516
411 Ga0207661_10089647
412 Ga0207667_10000442
413 Ga0207667_10002869
414 Ga0207667_10003424
415 Ga0207667_10007985
416 Ga0207667_10071095
417 Ga0207712_10017879
418 Ga0207640_10008158
419 Ga0207658_10013256
420 Ga0207677_10005245
421 Ga0207639_10000027
422 Ga0207702_10000307
423 Ga0207702_10017535
424 Ga0207702_10100846
425 Ga0207674_10001941
426 Ga0207674_10017722
427 Ga0207674_10040588
428 Ga0207698_10000007
429 Ga0207698_10000123
430 Ga0207698_10026347
431 Ga0207698_10062499
432 Ga0268266_10052333
433 Ga0268264_10000765
434 Ga0265318_10000914
435 Ga0265318_10005675
436 Ga0265336_10012471
437 Ga0265338_10004884
438 Ga0265338_10015558
439 Ga0265338_10035654
440 Ga0265338_10087671
441 Ga0265330_10000309
442 Ga0265332_10001665
443 Ga0265332_10049172
444 Ga0265328_10011160
445 Ga0265320_10007494
446 Ga0265320_10009269
447 Ga0265325_10000322
448 Ga0265325_10001965
449 Ga0265325_10005584
450 Ga0265325_10010449
451 Ga0265340_10000212
452 Ga0265340_10041502
453 Ga0265339_10000076
454 Ga0265339_10000361
455 Ga0265339_10000699
456 Ga0265339_10001440
457 Ga0265339_10001974
458 Ga0265331_10014518
459 Ga0265316_10001875
460 Ga0265316_10004467
461 Ga0265316_10004857
462 Ga0265316_10012462
463 Ga0265313_10001182
464 Ga0265313_10018878
465 Ga0265313_10032777
466 Ga0265314_10000131
467 Ga0265314_10011032
468 Ga0265342_10003338
469 Ga0265342_10006746
470 Ga0265342_10013933
471 Ga0265342_10022629
472 Ga0265342_10034171
473 Ga0265342_10068509
474 Ga0373956_0057000
475 Ga0373935_0012356
476 Ga0373927_0088546
477 Ga0373927_0095841
478 Ga0373937_0009907
479 Ga0373925_0032946
480 Ga0436361_0128003
481 Ga0453683_0010453
482 Ga0453683_0035257
483 Ga0466961_0030674
484 Ga0453684_0145721
485 Ga0453684_0301003
486 Ga0466959_0084707
487 Ga0451576_0109898
488 Ga0466967_0027315
489 Ga0466967_0122419
490 Ga0495629_0028001
491 Ga0495629_0066681
492 Ga0495580_0011437
493 Ga0495594_0005191
494 Ga0495594_0010078
495 Ga0495635_0038334
496 Ga0495657_0033358
497 Ga0495676_0071594
498 Ga0495602_0133468
499 Ga0496100_0026093
500 Ga0496101_0279581
501 Ga0496103_0093274
502 Ga0496104_0032995
503 Ga0496104_0219772
504 Ga0496105_0029252
505 Ga0496105_0089022
506 Ga0496106_0037318
507 Ga0496108_0126145
508 Ga0496111_0037761
509 Ga0496113_0143105
510 Ga0496114_0014975
511 Ga0496115_0017606
512 Ga0496115_0033009
513 Ga0496126_0006038
514 Ga0496126_0013928
515 Ga0495595_0072171
516 Ga0495619_0105292

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17785

PUA_3

PUA-like domain

82

146

0.96

PF09445

Methyltransf_15

RNA cap guanine-N2 methyltransferase

309

395

0.93

PF08241

Methyltransf_11

Methyltransferase domain

313

378

0.91

PF13649

Methyltransf_25

Methyltransferase domain

312

421

0.87

PF10672

Methyltrans_SAM

S-adenosylmethionine-dependent methyltransferase

236

473

0.82

PF13847

Methyltransf_31

Methyltransferase domain

307

451

0.8

PF05175

MTS

Methyltransferase small domain

287

444

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
2cww-assembly1.cif.gz_A-2 crystal structure of thermus thermophilus ttha1280, a putative sam-dependent rna methyltransferase, in complex with s-adenosyl-l-homocysteine 0.9397 42 453
2cww-assembly1.cif.gz_A-2 crystal structure of thermus thermophilus ttha1280, a putative sam-dependent rna methyltransferase, in complex with s-adenosyl-l-homocysteine 0.9325 42 453
1wxw-assembly1.cif.gz_A crystal structure of tt1595, a putative sam-dependent methyltransferase from thermus thermophillus hb8 0.9295 40 453
1wxw-assembly1.cif.gz_A crystal structure of tt1595, a putative sam-dependent methyltransferase from thermus thermophillus hb8 0.9272 40 453
2cww-assembly2.cif.gz_B crystal structure of thermus thermophilus ttha1280, a putative sam-dependent rna methyltransferase, in complex with s-adenosyl-l-homocysteine 0.927 42 453
ID Description Score Start End Superfamily
1wxwA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9556 234 453 3.40.50.150
1wxwA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9464 234 453 3.40.50.150
af_A0A1D6H1M4_236_424_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9361 275 451 3.40.50.150
af_I1KW47_231_444_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.935 234 453 3.40.50.150
2as0B03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9312 234 453 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A7V3SZE1-F1-model_v4 rRNA large subunit methyltransferase I 0.9943 361 453 GO:0005737
GO:0008168
GO:0032259
AF-A0A2W0B3Q9-F1-model_v4 SAM-dependent methyltransferase 0.9924 278 453 GO:0005737
GO:0008168
GO:0032259
AF-A0A2V6XEU4-F1-model_v4 Uncharacterized protein 0.9921 335 453 GO:0005737
GO:0016740
AF-A0A644YVQ5-F1-model_v4 Ribosomal RNA large subunit methyltransferase I (EC 2.1.1.191) 0.9919 387 453 GO:0005737
GO:0008168
GO:0032259
AF-A0A352CIM3-F1-model_v4 rRNA large subunit methyltransferase I 0.9912 334 453 GO:0005737
GO:0008168
GO:0032259

Map