F367992

General Info

Members Datasets Scaffolds Average Seq Length
258 165 252 390

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100018200|Ga0075428_1000182006
Length 368
Sequence MIQILLICFLICVVEFRSAQLPPVDVVVVERERVLTAAKKYLSEKPITITAATSSRSAGGPHDYFSEGDYWWPDPEKPDGPYIQRDGLSNPGNFNEHRRYLMRLSVQVPAMVAAWKLTQDLRYAKHAAEHLRAWFIDRRTKMNPHLRYAQAIHGRVTGRGVGIIDTLHLVEVLKAIKQWFSDYLLWITTDKYGVDEREAKNNHGTCWVLQVAAFARVTGDERLISYCRDRFKTVLVPNQIAVDGSFPQELRRTKPYGYSLFNLEAMAAICQLLSTPEDNLWTFETPDGRGMRKAMEFMTPYIRSKSGWSYPADVMYYQHWPMRQSSLLFAGIAFSRAEYIELWKKLPADSNVEEVVRNFFVRQPVLWW

Samples

Sample ID Description Type Environment
1 2738541297 Duganella sp. GV083 Isolate Unclassified
2 2738541357 Duganella sp. GV053 Isolate Unclassified
3 2738543003 Duganella sp. GV066 Isolate Unclassified
4 2738543026 Duganella sp. GV089 Isolate Unclassified
5 2738543029 Duganella sp. GV039 Isolate Unclassified
6 2821131069 Duganella sp. 1224 Isolate Unclassified
7 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
93 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
96 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
97 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
98 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
101 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
102 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
103 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
104 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
105 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
106 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
107 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
108 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
109 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
110 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
111 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
112 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
113 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
114 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
115 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
116 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
117 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
118 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
119 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
120 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
121 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
122 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
123 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
124 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
125 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
126 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
127 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
128 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
129 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
130 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
131 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
132 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
133 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
134 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
135 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
136 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
137 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
138 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
139 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
140 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
141 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
142 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
143 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
144 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
145 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
146 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
147 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
148 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
149 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
150 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
151 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
152 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
153 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
154 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
155 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
156 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
157 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
158 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
159 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
162 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
163 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
164 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
165 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.67
Metatranscriptomes 0
Isolates 2.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.39
Nodule 0
Rhizoplane 1.16
Rhizosphere 94.96
Stem 0
Stem Tuber 0
Unclassified 3.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10018089 3300003203 Bacteria 2900
2 Ga0065704_10126670 3300005289 Unclassified 1686
3 Ga0065715_10027913 3300005293 Bacteria 2102
4 Ga0065707_10006226 3300005295 Bacteria 2861
5 Ga0070690_100052622 3300005330 Bacteria 2603
6 Ga0070670_100220986 3300005331 Unclassified 1648
7 Ga0068869_100047454 3300005334 Bacteria 3102
8 Ga0068869_100117842 3300005334 Bacteria 2027
9 Ga0070680_100000314 3300005336 Bacteria 32426
10 Ga0070660_100067231 3300005339 Bacteria 2792
11 Ga0070692_10037285 3300005345 Bacteria 2471
12 Ga0070668_100141822 3300005347 Bacteria 1937
13 Ga0070671_100012349 3300005355 Bacteria 6878
14 Ga0070673_100008509 3300005364 Bacteria 6825
15 Ga0070659_100017700 3300005366 Bacteria 5367
16 Ga0070709_10002594 3300005434 Bacteria 9760
17 Ga0070714_100045075 3300005435 Bacteria 3736
18 Ga0070705_100060602 3300005440 Bacteria 2245
19 Ga0070708_100002366 3300005445 Bacteria 14596
20 Ga0070681_10044244 3300005458 Bacteria 4456
21 Ga0070706_100000137 3300005467 Bacteria 91778
22 Ga0070706_100019425 3300005467 Bacteria 6267
23 Ga0070706_100023261 3300005467 Bacteria 5709
24 Ga0070706_100152847 3300005467 Bacteria 2155
25 Ga0070706_100182586 3300005467 Bacteria 1959
26 Ga0070706_100229713 3300005467 Bacteria 1732
27 Ga0070707_100128743 3300005468 Bacteria 2460
28 Ga0070707_100205237 3300005468 Bacteria 1921
29 Ga0070707_100206915 3300005468 Bacteria 1912
30 Ga0070698_100018182 3300005471 Bacteria 7401
31 Ga0070698_100068562 3300005471 Bacteria 3564
32 Ga0070698_100195245 3300005471 Bacteria 1961
33 Ga0070699_100003214 3300005518 Bacteria 14449
34 Ga0070679_100074188 3300005530 Bacteria 3393
35 Ga0070697_100000076 3300005536 Bacteria 79138
36 Ga0070697_100036809 3300005536 Bacteria 3953
37 Ga0070697_100037427 3300005536 Bacteria 3920
38 Ga0068853_100003200 3300005539 Bacteria 12510
39 Ga0068853_100007428 3300005539 Bacteria 8770
40 Ga0070693_100125555 3300005547 Unclassified 1597
41 Ga0070704_100055234 3300005549 Bacteria 2814
42 Ga0068855_100011438 3300005563 Bacteria 10722
43 Ga0068855_100042124 3300005563 Bacteria 5410
44 Ga0070664_100003180 3300005564 Bacteria 13270
45 Ga0070664_100003772 3300005564 Bacteria 12225
46 Ga0070664_100026504 3300005564 Bacteria 4808
47 Ga0068857_100131324 3300005577 Bacteria 2259
48 Ga0068854_100009757 3300005578 Bacteria 6207
49 Ga0068856_100093972 3300005614 Bacteria 2985
50 Ga0068852_100083129 3300005616 Bacteria 2847
51 Ga0068859_100463995 3300005617 Bacteria 1362
52 Ga0068864_100028893 3300005618 Bacteria 4692
53 Ga0068864_100210336 3300005618 Bacteria 1791
54 Ga0068861_100094208 3300005719 Bacteria 2369
55 Ga0068861_100106009 3300005719 Unclassified 2244
56 Ga0081455_10013994 3300005937 Bacteria 7886
57 Ga0081455_10068745 3300005937 Unclassified 2947
58 Ga0081539_10005797 3300005985 Bacteria 12291
59 Ga0075428_100018200 3300006844 Bacteria 7763
60 Ga0075428_100139272 3300006844 Bacteria 2638
61 Ga0075431_100035519 3300006847 Bacteria 5132
62 Ga0075431_100151862 3300006847 Unclassified 2384
63 Ga0075434_100272301 3300006871 Unclassified 1712
64 Ga0075436_100000008 3300006914 Bacteria 279288
65 Ga0097620_100464040 3300006931 Bacteria 1362
66 Ga0075435_100008036 3300007076 Bacteria 7551
67 Ga0075435_100016103 3300007076 Bacteria 5633
68 Ga0075435_100033168 3300007076 Unclassified 4081
69 Ga0105240_10053142 3300009093 Bacteria 5088
70 Ga0105245_10288992 3300009098 Bacteria 1605
71 Ga0114129_10012140 3300009147 Bacteria 12265
72 Ga0114129_10017141 3300009147 Bacteria 10314
73 Ga0114129_10030643 3300009147 Bacteria 7610
74 Ga0114129_10050833 3300009147 Bacteria 5820
75 Ga0114129_10067493 3300009147 Bacteria 4988
76 Ga0114129_10088975 3300009147 Bacteria 4280
77 Ga0114129_10149409 3300009147 Bacteria 3198
78 Ga0105241_10042123 3300009174 Bacteria 3452
79 Ga0105237_10199169 3300009545 Unclassified 2002
80 Ga0105249_10000113 3300009553 Bacteria 108613
81 Ga0157373_10028153 3300013100 Unclassified 4054
82 Ga0157370_10005567 3300013104 Bacteria 14116
83 Ga0157369_10003478 3300013105 Bacteria 18686
84 Ga0157378_10042063 3300013297 Bacteria 4054
85 Ga0157378_10142268 3300013297 Bacteria 2228
86 Ga0163162_10000023 3300013306 Bacteria 193395
87 Ga0163162_10531774 3300013306 Bacteria 1305
88 Ga0157372_10007647 3300013307 Bacteria 11490
89 Ga0157375_10004349 3300013308 Bacteria 12300
90 Ga0157375_10350074 3300013308 Bacteria 1643
91 Ga0163163_10029643 3300014325 Bacteria 5266
92 Ga0163163_10032050 3300014325 Bacteria 5076
93 Ga0157380_10004615 3300014326 Bacteria 9568
94 Ga0213876_10000141 3300021384 Bacteria 78529
95 Ga0207688_10036263 3300025901 Bacteria 2734
96 Ga0207684_10015346 3300025910 Bacteria 6594
97 Ga0207684_10016349 3300025910 Bacteria 6372
98 Ga0207684_10139224 3300025910 Bacteria 2086
99 Ga0207707_10019038 3300025912 Bacteria 5990
100 Ga0207660_10005184 3300025917 Bacteria 8471
101 Ga0207660_10094946 3300025917 Bacteria 2217
102 Ga0207652_10037537 3300025921 Bacteria 4101
103 Ga0207652_10070018 3300025921 Bacteria 3046
104 Ga0207646_10005977 3300025922 Bacteria 12693
105 Ga0207646_10133263 3300025922 Bacteria 2237
106 Ga0207681_10029715 3300025923 Bacteria 3554
107 Ga0207650_10182465 3300025925 Unclassified 1673
108 Ga0207664_10036850 3300025929 Bacteria 3782
109 Ga0207706_10124798 3300025933 Bacteria 2265
110 Ga0207706_10155290 3300025933 Bacteria 2013
111 Ga0207689_10078835 3300025942 Bacteria 2707
112 Ga0207689_10165700 3300025942 Bacteria 1821
113 Ga0207679_10006310 3300025945 Bacteria 7487
114 Ga0207679_10047312 3300025945 Bacteria 3124
115 Ga0207667_10033572 3300025949 Bacteria 5516
116 Ga0207667_10047270 3300025949 Bacteria 4555
117 Ga0207651_10205240 3300025960 Bacteria 1582
118 Ga0207712_10000216 3300025961 Bacteria 57333
119 Ga0207668_10023370 3300025972 Bacteria 3972
120 Ga0207639_10006372 3300026041 Bacteria 8017
121 Ga0207708_10077418 3300026075 Bacteria 2552
122 Ga0207676_10203885 3300026095 Bacteria 1749
123 Ga0207674_10015491 3300026116 Bacteria 8374
124 Ga0207674_10039101 3300026116 Bacteria 4920
125 Ga0207674_10146762 3300026116 Bacteria 2317
126 Ga0207428_10017022 3300027907 Bacteria 6245
127 Ga0207428_10091383 3300027907 Bacteria 2363
128 Ga0395900_0017886 3300037418 Bacteria 7235
129 Ga0395898_0031905 3300037466 Bacteria 5260
130 Ga0395898_0104784 3300037466 Bacteria 2712
131 Ga0395901_0037498 3300038443 Bacteria 5013
132 Ga0436365_0289912 3300039437 Bacteria 336570
133 Ga0453683_0103402 3300044673 Unclassified 1789
134 Ga0451576_0076987 3300045051 Bacteria 3471
135 Ga0495627_004746 3300046453 Bacteria 5618
136 Ga0495590_0000013 3300046457 Bacteria 271977
137 Ga0495590_0000087 3300046457 Bacteria 60113
138 Ga0495590_0039426 3300046457 Bacteria 1648
139 Ga0495591_000109 3300046458 Bacteria 94877
140 Ga0495653_0000002 3300046463 Bacteria 507262
141 Ga0495653_0001899 3300046463 Bacteria 16472
142 Ga0495653_0031697 3300046463 Bacteria 4201
143 Ga0495580_0021841 3300046472 Bacteria 4720
144 Ga0495605_0009971 3300046474 Bacteria 5323
145 Ga0495584_0000052 3300046491 Bacteria 87015
146 Ga0495585_0021395 3300046492 Bacteria 3714
147 Ga0495594_0005391 3300046499 Bacteria 6574
148 Ga0495596_0000517 3300046500 Bacteria 24429
149 Ga0495596_0006484 3300046500 Bacteria 5373
150 Ga0495596_0018290 3300046500 Bacteria 2889
151 Ga0495596_0024510 3300046500 Bacteria 2441
152 Ga0495596_0034506 3300046500 Bacteria 2008
153 Ga0495607_0000479 3300046501 Bacteria 40004
154 Ga0495583_0000685 3300046506 Bacteria 43784
155 Ga0495583_0001888 3300046506 Bacteria 19427
156 Ga0495583_0050217 3300046506 Bacteria 1906
157 Ga0495606_0000030 3300046507 Bacteria 249484
158 Ga0495606_0003096 3300046507 Bacteria 18095
159 Ga0495606_0005109 3300046507 Bacteria 12755
160 Ga0495606_0012574 3300046507 Bacteria 6775
161 Ga0495606_0128843 3300046507 Bacteria 1506
162 Ga0495606_0143780 3300046507 Unclassified 1406
163 Ga0495610_0000313 3300046512 Bacteria 51404
164 Ga0495616_0002049 3300046513 Bacteria 13543
165 Ga0495616_0004800 3300046513 Bacteria 8466
166 Ga0495616_0013992 3300046513 Bacteria 4508
167 Ga0495630_0015766 3300046517 Bacteria 5522
168 Ga0495632_0000029 3300046519 Bacteria 171022
169 Ga0495632_0019202 3300046519 Bacteria 3730
170 Ga0495632_0032143 3300046519 Bacteria 2706
171 Ga0495637_0000008 3300046520 Bacteria 404658
172 Ga0495643_0031422 3300046522 Bacteria 2954
173 Ga0495643_0042076 3300046522 Bacteria 2489
174 Ga0495644_0006056 3300046523 Bacteria 4710
175 Ga0495648_0039189 3300046524 Bacteria 3018
176 Ga0495666_0036498 3300046526 Bacteria 2394
177 Ga0495642_0019481 3300046528 Unclassified 2660
178 Ga0495642_0034430 3300046528 Bacteria 2040
179 Ga0495654_0019081 3300046530 Bacteria 3587
180 Ga0495665_0007734 3300046531 Bacteria 5815
181 Ga0495587_0038279 3300046536 Bacteria 2876
182 Ga0495609_0043983 3300046538 Bacteria 2004
183 Ga0495597_0000777 3300046542 Bacteria 25271
184 Ga0495597_0066351 3300046542 Bacteria 1564
185 Ga0495645_0181319 3300046543 Bacteria 1443
186 Ga0495633_0002160 3300046558 Bacteria 14100
187 Ga0495633_0002754 3300046558 Bacteria 12159
188 Ga0495668_0016232 3300046616 Bacteria 4330
189 Ga0495668_0067304 3300046616 Bacteria 1970
190 Ga0495611_0000214 3300046648 Bacteria 40851
191 Ga0495611_0047080 3300046648 Bacteria 1934
192 Ga0495588_0012475 3300046674 Bacteria 4018
193 Ga0495588_0122173 3300046674 Unclassified 1373
194 Ga0495623_0009357 3300046679 Bacteria 6364
195 Ga0495623_0021542 3300046679 Bacteria 4162
196 Ga0495669_0021265 3300046684 Bacteria 2814
197 Ga0495670_0126287 3300046691 Bacteria 1331
198 Ga0495671_0000547 3300046692 Bacteria 28201
199 Ga0495671_0000779 3300046692 Bacteria 22900
200 Ga0495671_0040553 3300046692 Bacteria 2348
201 Ga0495649_0000205 3300046694 Bacteria 52102
202 Ga0495649_0005550 3300046694 Bacteria 7986
203 Ga0495649_0044007 3300046694 Bacteria 2437
204 Ga0495649_0087454 3300046694 Bacteria 1663
205 Ga0495589_0058094 3300046794 Unclassified 1902
206 Ga0495660_0038619 3300046810 Bacteria 2653
207 Ga0495581_0095849 3300047315 Bacteria 1723
208 Ga0495604_0009765 3300047317 Bacteria 7592
209 Ga0495636_0001596 3300047318 Bacteria 8615
210 Ga0495672_0000033 3300047320 Bacteria 291992
211 Ga0495672_0062150 3300047320 Bacteria 2149
212 Ga0495683_0000301 3300047323 Bacteria 41920
213 Ga0495687_000835 3300047443 Bacteria 32864
214 Ga0495675_0005893 3300047444 Bacteria 7487
215 Ga0495675_0040753 3300047444 Bacteria 2960
216 Ga0495677_0003467 3300047445 Bacteria 6120
217 Ga0495679_029756 3300047446 Bacteria 1779
218 Ga0495685_024000 3300047447 Bacteria 2099
219 Ga0495673_0000031 3300047469 Bacteria 447868
220 Ga0495681_0028405 3300047470 Bacteria 2878
221 Ga0495681_0032253 3300047470 Bacteria 2639
222 Ga0495681_0066071 3300047470 Bacteria 1651
223 Ga0495686_0031987 3300047472 Bacteria 3407
224 Ga0495602_0044460 3300048088 Bacteria 4028
225 Ga0495626_0016457 3300048091 Bacteria 3754
226 Ga0495626_0031131 3300048091 Bacteria 2569
227 Ga0496109_0000049 3300048912 Bacteria 127530
228 Ga0496112_0026499 3300048915 Bacteria 5578
229 Ga0496115_0004669 3300048918 Bacteria 9926
230 Ga0496126_0003146 3300048929 Bacteria 21272
231 Ga0495678_000024 3300049459 Bacteria 229034
232 Ga0495678_000641 3300049459 Bacteria 32197
233 Ga0495678_001131 3300049459 Bacteria 22164
234 Ga0495682_0000130 3300049460 Bacteria 65523
235 Ga0501076_0079159 3300049592 Bacteria 2638
236 nmdc:mga05p37_1061_c1 3300050507 Bacteria 31431
237 nmdc:mga05p37_22363_c1 3300050507 Bacteria 3695
238 nmdc:mga05p37_257293_c1 3300050507 Bacteria 2091
239 nmdc:mga05p37_35458_c1 3300050507 Bacteria 6116
240 nmdc:mga05p37_364062_c1 3300050507 Bacteria 1699
241 nmdc:mga09592_26806_c1 3300050508 Bacteria 4777
242 nmdc:mga06r32_252336_c1 3300050510 Bacteria 1752
243 nmdc:mga06r32_39271_c1 3300050510 Bacteria 4491
244 nmdc:mga08y16_7945_c1 3300050511 Bacteria 11102
245 nmdc:mga0rr50_1485_c1 3300050513 Bacteria 12870
246 nmdc:mga0rr50_162537_c1 3300050513 Bacteria 1813
247 nmdc:mga0rr50_50537_c1 3300050513 Unclassified 3081
248 nmdc:mga08x19_16_c1 3300050514 Bacteria 348119
249 nmdc:mga0a205_153372_c1 3300050515 Unclassified 2202
250 nmdc:mga0a205_29018_c1 3300050515 Bacteria 5293
251 Ga0500586_000401 3300053145 Bacteria 8667
252 Ga0501084_0312451 3300054114 Bacteria 1327

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047470 Ga0495681_0028405 Ga0495681_0028405_255_1478 348
2 3300046500 Ga0495596_0006484 Ga0495596_0006484_3159_4382 349
3 3300046692 Ga0495671_0000779 Ga0495671_0000779_8062_9285 351
4 3300046458 Ga0495591_000109 Ga0495591_000109_64051_65289 352
5 3300046501 Ga0495607_0000479 Ga0495607_0000479_8792_10030 352
6 3300046512 Ga0495610_0000313 Ga0495610_0000313_30176_31414 352
7 3300046519 Ga0495632_0032143 Ga0495632_0032143_856_2094 352
8 3300046520 Ga0495637_0000008 Ga0495637_0000008_35752_36990 352
9 3300046538 Ga0495609_0043983 Ga0495609_0043983_93_1331 352
10 3300046558 Ga0495633_0002160 Ga0495633_0002160_313_1551 352
11 3300047320 Ga0495672_0000033 Ga0495672_0000033_231094_232332 352
12 3300047323 Ga0495683_0000301 Ga0495683_0000301_25107_26345 352
13 3300047470 Ga0495681_0032253 Ga0495681_0032253_240_1478 352
14 3300047443 Ga0495687_000835 Ga0495687_000835_5334_6542 356
15 3300046524 Ga0495648_0039189 Ga0495648_0039189_310_1521 358
16 3300006844 Ga0075428_100018200 Ga0075428_1000182006 359
17 3300046513 Ga0495616_0002049 Ga0495616_0002049_11947_13170 360
18 3300046694 Ga0495649_0005550 Ga0495649_0005550_5609_6832 360
19 3300049459 Ga0495678_000641 Ga0495678_000641_3006_4229 360
20 3300049460 Ga0495682_0000130 Ga0495682_0000130_20809_22032 360
21 3300047472 Ga0495686_0031987 Ga0495686_0031987_940_2178 361
22 3300049459 Ga0495678_000024 Ga0495678_000024_173202_174440 361
23 3300046694 Ga0495649_0000205 Ga0495649_0000205_19255_20493 362
24 3300048091 Ga0495626_0031131 Ga0495626_0031131_835_2058 363
25 3300044673 Ga0453683_0103402 Ga0453683_0103402_66_1193 364
26 3300046500 Ga0495596_0034506 Ga0495596_0034506_359_1582 365
27 3300046506 Ga0495583_0000685 Ga0495583_0000685_39545_40654 366
28 3300046513 Ga0495616_0013992 Ga0495616_0013992_2926_4035 366
29 3300046506 Ga0495583_0050217 Ga0495583_0050217_258_1481 367
30 3300046507 Ga0495606_0128843 Ga0495606_0128843_82_1305 367
31 3300046519 Ga0495632_0000029 Ga0495632_0000029_852_2075 367
32 3300047445 Ga0495677_0003467 Ga0495677_0003467_3833_5071 367
33 3300049459 Ga0495678_001131 Ga0495678_001131_19942_21165 367
34 3300005937 Ga0081455_10068745 Ga0081455_100687452 368
35 3300046500 Ga0495596_0018290 Ga0495596_0018290_859_2097 369
36 3300046522 Ga0495643_0042076 Ga0495643_0042076_581_1819 369
37 3300047446 Ga0495679_029756 Ga0495679_029756_94_1332 369
38 3300047470 Ga0495681_0066071 Ga0495681_0066071_124_1362 369
39 3300046679 Ga0495623_0021542 Ga0495623_0021542_254_1462 370
40 3300050507 nmdc:mga05p37_22363_c1 nmdc:mga05p37_22363_c1_2557_3669 370
41 3300005471 Ga0070698_100068562 Ga0070698_1000685622 371
42 3300009147 Ga0114129_10030643 Ga0114129_100306432 371
43 3300025910 Ga0207684_10015346 Ga0207684_100153462 371
44 3300025922 Ga0207646_10005977 Ga0207646_1000597711 371
45 3300005330 Ga0070690_100052622 Ga0070690_1000526221 372
46 3300005347 Ga0070668_100141822 Ga0070668_1001418222 372
47 3300005539 Ga0068853_100003200 Ga0068853_1000032007 372
48 3300005564 Ga0070664_100003772 Ga0070664_1000037722 372
49 3300025921 Ga0207652_10037537 Ga0207652_100375372 372
50 3300025933 Ga0207706_10124798 Ga0207706_101247982 372
51 3300025945 Ga0207679_10006310 Ga0207679_100063106 372
52 3300025972 Ga0207668_10023370 Ga0207668_100233704 372
53 3300026041 Ga0207639_10006372 Ga0207639_100063722 372
54 3300046519 Ga0495632_0019202 Ga0495632_0019202_45_1214 372
55 3300046522 Ga0495643_0031422 Ga0495643_0031422_1687_2841 372
56 3300046674 Ga0495588_0122173 Ga0495588_0122173_131_1291 372
57 3300048091 Ga0495626_0016457 Ga0495626_0016457_2532_3701 372
58 3300048918 Ga0496115_0004669 Ga0496115_0004669_2504_3664 372
59 3300005331 Ga0070670_100220986 Ga0070670_1002209861 373
60 3300005334 Ga0068869_100047454 Ga0068869_1000474542 373
61 3300005467 Ga0070706_100000137 Ga0070706_10000013764 373
62 3300007076 Ga0075435_100033168 Ga0075435_1000331682 373
63 3300009093 Ga0105240_10053142 Ga0105240_100531425 373
64 3300009147 Ga0114129_10088975 Ga0114129_100889752 373
65 3300009174 Ga0105241_10042123 Ga0105241_100421232 373
66 3300025925 Ga0207650_10182465 Ga0207650_101824652 373
67 3300025942 Ga0207689_10078835 Ga0207689_100788352 373
68 3300037418 Ga0395900_0017886 Ga0395900_0017886_3750_4874 373
69 3300037466 Ga0395898_0104784 Ga0395898_0104784_610_1734 373
70 3300038443 Ga0395901_0037498 Ga0395901_0037498_3437_4561 373
71 3300045051 Ga0451576_0076987 Ga0451576_0076987_251_1420 373
72 3300046457 Ga0495590_0039426 Ga0495590_0039426_280_1437 373
73 3300046463 Ga0495653_0000002 Ga0495653_0000002_385715_386869 373
74 3300046491 Ga0495584_0000052 Ga0495584_0000052_35120_36277 373
75 3300046492 Ga0495585_0021395 Ga0495585_0021395_1502_2632 373
76 3300046500 Ga0495596_0024510 Ga0495596_0024510_712_1872 373
77 3300046507 Ga0495606_0000030 Ga0495606_0000030_117601_118755 373
78 3300046507 Ga0495606_0005109 Ga0495606_0005109_8469_9626 373
79 3300046507 Ga0495606_0143780 Ga0495606_0143780_102_1232 373
80 3300046523 Ga0495644_0006056 Ga0495644_0006056_3096_4226 373
81 3300046528 Ga0495642_0019481 Ga0495642_0019481_345_1475 373
82 3300046616 Ga0495668_0067304 Ga0495668_0067304_267_1397 373
83 3300046692 Ga0495671_0040553 Ga0495671_0040553_275_1456 373
84 3300046794 Ga0495589_0058094 Ga0495589_0058094_600_1730 373
85 3300047447 Ga0495685_024000 Ga0495685_024000_459_1589 373
86 3300047469 Ga0495673_0000031 Ga0495673_0000031_326137_327285 373
87 3300048929 Ga0496126_0003146 Ga0496126_0003146_7300_8448 373
88 3300050507 nmdc:mga05p37_257293_c1 nmdc:mga05p37_257293_c1_840_1988 373
89 3300050513 nmdc:mga0rr50_50537_c1 nmdc:mga0rr50_50537_c1_1396_2571 373
90 iso_pu_bacteria 2738541297 2738829830 373
91 iso_pu_bacteria 2738541357 2739153626 373
92 iso_pu_bacteria 2738543003 2739195546 373
93 iso_pu_bacteria 2738543026 2739322022 373
94 iso_pu_bacteria 2738543029 2739340263 373
95 3300005434 Ga0070709_10002594 Ga0070709_100025944 374
96 3300005445 Ga0070708_100002366 Ga0070708_1000023665 374
97 3300005467 Ga0070706_100023261 Ga0070706_1000232611 374
98 3300005518 Ga0070699_100003214 Ga0070699_1000032145 374
99 3300005536 Ga0070697_100037427 Ga0070697_1000374272 374
100 3300046457 Ga0495590_0000087 Ga0495590_0000087_40726_41889 374
101 3300046474 Ga0495605_0009971 Ga0495605_0009971_2557_3690 374
102 3300046507 Ga0495606_0003096 Ga0495606_0003096_6525_7682 374
103 3300046528 Ga0495642_0034430 Ga0495642_0034430_877_2010 374
104 3300046530 Ga0495654_0019081 Ga0495654_0019081_1338_2471 374
105 3300046542 Ga0495597_0000777 Ga0495597_0000777_23729_24862 374
106 3300046558 Ga0495633_0002754 Ga0495633_0002754_4785_5942 374
107 3300049592 Ga0501076_0079159 Ga0501076_0079159_716_1870 374
108 3300050513 nmdc:mga0rr50_162537_c1 nmdc:mga0rr50_162537_c1_511_1650 374
109 3300053145 Ga0500586_000401 Ga0500586_000401_2747_3904 374
110 3300005467 Ga0070706_100019425 Ga0070706_1000194253 375
111 3300005468 Ga0070707_100205237 Ga0070707_1002052371 375
112 3300007076 Ga0075435_100016103 Ga0075435_1000161032 375
113 3300009147 Ga0114129_10017141 Ga0114129_100171418 375
114 3300046463 Ga0495653_0001899 Ga0495653_0001899_11453_12622 375
115 3300046463 Ga0495653_0031697 Ga0495653_0031697_1862_3031 375
116 3300046472 Ga0495580_0021841 Ga0495580_0021841_601_1770 375
117 3300046499 Ga0495594_0005391 Ga0495594_0005391_1293_2462 375
118 3300046507 Ga0495606_0012574 Ga0495606_0012574_2263_3519 375
119 3300046513 Ga0495616_0004800 Ga0495616_0004800_3577_4833 375
120 3300046517 Ga0495630_0015766 Ga0495630_0015766_3030_4241 375
121 3300046531 Ga0495665_0007734 Ga0495665_0007734_1082_2293 375
122 3300046536 Ga0495587_0038279 Ga0495587_0038279_383_1594 375
123 3300046616 Ga0495668_0016232 Ga0495668_0016232_744_2000 375
124 3300046648 Ga0495611_0047080 Ga0495611_0047080_181_1437 375
125 3300046674 Ga0495588_0012475 Ga0495588_0012475_1854_3023 375
126 3300046679 Ga0495623_0009357 Ga0495623_0009357_3175_4386 375
127 3300046684 Ga0495669_0021265 Ga0495669_0021265_398_1654 375
128 3300046694 Ga0495649_0087454 Ga0495649_0087454_67_1239 375
129 3300046810 Ga0495660_0038619 Ga0495660_0038619_1084_2340 375
130 3300047317 Ga0495604_0009765 Ga0495604_0009765_3211_4380 375
131 3300047318 Ga0495636_0001596 Ga0495636_0001596_2908_4047 375
132 3300047320 Ga0495672_0062150 Ga0495672_0062150_767_2023 375
133 3300047444 Ga0495675_0005893 Ga0495675_0005893_3212_4381 375
134 3300048088 Ga0495602_0044460 Ga0495602_0044460_1995_3164 375
135 3300050515 nmdc:mga0a205_153372_c1 nmdc:mga0a205_153372_c1_666_1817 375
136 iso_pu_bacteria 2821131069 2821131786 375
137 3300005355 Ga0070671_100012349 Ga0070671_1000123492 376
138 3300005364 Ga0070673_100008509 Ga0070673_1000085092 376
139 3300005617 Ga0068859_100463995 Ga0068859_1004639952 376
140 3300006931 Ga0097620_100464040 Ga0097620_1004640402 376
141 3300009147 Ga0114129_10067493 Ga0114129_100674932 376
142 3300009545 Ga0105237_10199169 Ga0105237_101991692 376
143 3300013306 Ga0163162_10531774 Ga0163162_105317741 376
144 3300025960 Ga0207651_10205240 Ga0207651_102052402 376
145 3300046526 Ga0495666_0036498 Ga0495666_0036498_29_1255 376
146 3300046694 Ga0495649_0044007 Ga0495649_0044007_914_2095 376
147 3300047315 Ga0495581_0095849 Ga0495581_0095849_77_1303 376
148 3300047444 Ga0495675_0040753 Ga0495675_0040753_598_1824 376
149 3300050507 nmdc:mga05p37_364062_c1 nmdc:mga05p37_364062_c1_234_1370 376
150 3300050510 nmdc:mga06r32_39271_c1 nmdc:mga06r32_39271_c1_2716_3852 376
151 3300050515 nmdc:mga0a205_29018_c1 nmdc:mga0a205_29018_c1_12_1148 376
152 3300005336 Ga0070680_100000314 Ga0070680_10000031421 377
153 3300005339 Ga0070660_100067231 Ga0070660_1000672312 377
154 3300005366 Ga0070659_100017700 Ga0070659_1000177003 377
155 3300005435 Ga0070714_100045075 Ga0070714_1000450752 377
156 3300005458 Ga0070681_10044244 Ga0070681_100442443 377
157 3300005530 Ga0070679_100074188 Ga0070679_1000741882 377
158 3300005539 Ga0068853_100007428 Ga0068853_1000074285 377
159 3300005547 Ga0070693_100125555 Ga0070693_1001255551 377
160 3300005563 Ga0068855_100011438 Ga0068855_1000114386 377
161 3300005563 Ga0068855_100042124 Ga0068855_1000421243 377
162 3300005564 Ga0070664_100003180 Ga0070664_1000031806 377
163 3300005577 Ga0068857_100131324 Ga0068857_1001313242 377
164 3300005578 Ga0068854_100009757 Ga0068854_1000097575 377
165 3300005614 Ga0068856_100093972 Ga0068856_1000939723 377
166 3300005618 Ga0068864_100210336 Ga0068864_1002103362 377
167 3300005937 Ga0081455_10013994 Ga0081455_100139942 377
168 3300006871 Ga0075434_100272301 Ga0075434_1002723012 377
169 3300013100 Ga0157373_10028153 Ga0157373_100281533 377
170 3300013104 Ga0157370_10005567 Ga0157370_100055676 377
171 3300013105 Ga0157369_10003478 Ga0157369_100034785 377
172 3300013297 Ga0157378_10042063 Ga0157378_100420632 377
173 3300013307 Ga0157372_10007647 Ga0157372_100076477 377
174 3300013308 Ga0157375_10350074 Ga0157375_103500742 377
175 3300025912 Ga0207707_10019038 Ga0207707_100190382 377
176 3300025917 Ga0207660_10005184 Ga0207660_100051842 377
177 3300025917 Ga0207660_10094946 Ga0207660_100949462 377
178 3300025921 Ga0207652_10070018 Ga0207652_100700182 377
179 3300025929 Ga0207664_10036850 Ga0207664_100368502 377
180 3300025933 Ga0207706_10155290 Ga0207706_101552902 377
181 3300025949 Ga0207667_10033572 Ga0207667_100335723 377
182 3300025949 Ga0207667_10047270 Ga0207667_100472703 377
183 3300026116 Ga0207674_10015491 Ga0207674_100154917 377
184 3300026116 Ga0207674_10146762 Ga0207674_101467622 377
185 3300005468 Ga0070707_100128743 Ga0070707_1001287432 378
186 3300021384 Ga0213876_10000141 Ga0213876_100001418 378
187 3300025922 Ga0207646_10133263 Ga0207646_101332632 378
188 3300039437 Ga0436365_0289912 Ga0436365_0289912_60527_61723 378
189 3300046500 Ga0495596_0000517 Ga0495596_0000517_13430_14638 378
190 3300046542 Ga0495597_0066351 Ga0495597_0066351_330_1538 378
191 3300046692 Ga0495671_0000547 Ga0495671_0000547_9750_10958 378
192 3300048912 Ga0496109_0000049 Ga0496109_0000049_11307_12461 378
193 3300050507 nmdc:mga05p37_35458_c1 nmdc:mga05p37_35458_c1_909_2063 378
194 3300054114 Ga0501084_0312451 Ga0501084_0312451_16_1191 378
195 3300009147 Ga0114129_10149409 Ga0114129_101494092 379
196 3300046543 Ga0495645_0181319 Ga0495645_0181319_141_1349 379
197 3300005289 Ga0065704_10126670 Ga0065704_101266702 380
198 3300005536 Ga0070697_100000076 Ga0070697_10000007639 380
199 3300006847 Ga0075431_100151862 Ga0075431_1001518622 380
200 3300046453 Ga0495627_004746 Ga0495627_004746_4381_5604 380
201 3300046457 Ga0495590_0000013 Ga0495590_0000013_234728_235966 380
202 3300046506 Ga0495583_0001888 Ga0495583_0001888_15083_16321 380
203 3300046648 Ga0495611_0000214 Ga0495611_0000214_14727_15965 380
204 3300046691 Ga0495670_0126287 Ga0495670_0126287_18_1241 380
205 3300048915 Ga0496112_0026499 Ga0496112_0026499_3884_5044 380
206 3300005293 Ga0065715_10027913 Ga0065715_100279132 381
207 3300005295 Ga0065707_10006226 Ga0065707_100062261 381
208 3300005334 Ga0068869_100117842 Ga0068869_1001178422 381
209 3300005345 Ga0070692_10037285 Ga0070692_100372852 381
210 3300005467 Ga0070706_100152847 Ga0070706_1001528471 381
211 3300005549 Ga0070704_100055234 Ga0070704_1000552342 381
212 3300005564 Ga0070664_100026504 Ga0070664_1000265042 381
213 3300005616 Ga0068852_100083129 Ga0068852_1000831292 381
214 3300005618 Ga0068864_100028893 Ga0068864_1000288932 381
215 3300005719 Ga0068861_100106009 Ga0068861_1001060092 381
216 3300006844 Ga0075428_100139272 Ga0075428_1001392722 381
217 3300006847 Ga0075431_100035519 Ga0075431_1000355194 381
218 3300009098 Ga0105245_10288992 Ga0105245_102889921 381
219 3300014325 Ga0163163_10029643 Ga0163163_100296432 381
220 3300014325 Ga0163163_10032050 Ga0163163_100320502 381
221 3300025901 Ga0207688_10036263 Ga0207688_100362632 381
222 3300025923 Ga0207681_10029715 Ga0207681_100297152 381
223 3300025942 Ga0207689_10165700 Ga0207689_101657002 381
224 3300025945 Ga0207679_10047312 Ga0207679_100473122 381
225 3300026075 Ga0207708_10077418 Ga0207708_100774182 381
226 3300026095 Ga0207676_10203885 Ga0207676_102038852 381
227 3300026116 Ga0207674_10039101 Ga0207674_100391012 381
228 3300027907 Ga0207428_10017022 Ga0207428_100170223 381
229 3300027907 Ga0207428_10091383 Ga0207428_100913832 381
230 3300037466 Ga0395898_0031905 Ga0395898_0031905_1990_3189 381
231 3300050508 nmdc:mga09592_26806_c1 nmdc:mga09592_26806_c1_3111_4310 381
232 3300050511 nmdc:mga08y16_7945_c1 nmdc:mga08y16_7945_c1_2129_3295 381
233 3300005468 Ga0070707_100206915 Ga0070707_1002069152 382
234 3300013297 Ga0157378_10142268 Ga0157378_101422681 382
235 3300025910 Ga0207684_10016349 Ga0207684_100163492 382
236 3300050510 nmdc:mga06r32_252336_c1 nmdc:mga06r32_252336_c1_200_1369 382
237 3300006914 Ga0075436_100000008 Ga0075436_100000008239 383
238 3300007076 Ga0075435_100008036 Ga0075435_1000080364 383
239 3300009147 Ga0114129_10012140 Ga0114129_100121406 383
240 3300050513 nmdc:mga0rr50_1485_c1 nmdc:mga0rr50_1485_c1_2612_3775 383
241 3300050514 nmdc:mga08x19_16_c1 nmdc:mga08x19_16_c1_263684_264847 383
242 3300005440 Ga0070705_100060602 Ga0070705_1000606022 385
243 3300005467 Ga0070706_100229713 Ga0070706_1002297131 385
244 3300005471 Ga0070698_100018182 Ga0070698_1000181824 385
245 3300005471 Ga0070698_100195245 Ga0070698_1001952452 385
246 3300005536 Ga0070697_100036809 Ga0070697_1000368093 385
247 3300005719 Ga0068861_100094208 Ga0068861_1000942082 385
248 3300009147 Ga0114129_10050833 Ga0114129_100508332 385
249 3300009553 Ga0105249_10000113 Ga0105249_1000011370 385
250 3300013306 Ga0163162_10000023 Ga0163162_1000002362 385
251 3300013308 Ga0157375_10004349 Ga0157375_100043494 385
252 3300014326 Ga0157380_10004615 Ga0157380_100046153 385
253 3300025961 Ga0207712_10000216 Ga0207712_1000021613 385
254 3300050507 nmdc:mga05p37_1061_c1 nmdc:mga05p37_1061_c1_18261_19523 385
255 3300005467 Ga0070706_100182586 Ga0070706_1001825863 386
256 3300025910 Ga0207684_10139224 Ga0207684_101392242 386
257 3300003203 JGI25406J46586_10018089 JGI25406J46586_100180892 387
258 3300005985 Ga0081539_10005797 Ga0081539_100057973 387

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05426

Alginate_lyase

Alginate lyase

48

308

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nnb-assembly1.cif.gz_A crystal structure of an alginate lyase (bacova_01668) from bacteroides ovatus at 1.60 a resolution 0.8667 29 379
8bdq-assembly1.cif.gz_A crystal structure of bacteroides ovatus cp926 pl38 alginate lyase 0.8379 19 386
3nnb-assembly1.cif.gz_A crystal structure of an alginate lyase (bacova_01668) from bacteroides ovatus at 1.60 a resolution 0.8019 29 379
8bdq-assembly1.cif.gz_A crystal structure of bacteroides ovatus cp926 pl38 alginate lyase 0.7985 19 386
7fi2-assembly1.cif.gz_A crystal structure of multi-functional polysaccharide lyase smlt1473-h168a from stenotrophomonas maltophilia (strain k279a) at ph-5.0 0.7533 45 384
ID Description Score Start End Superfamily
3nnbA01 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase;Chondroitin AC/alginate lyase 0.8463 29 379 1.50.10.100
3nnbA01 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase;Chondroitin AC/alginate lyase 0.7851 29 379 1.50.10.100
4ok4B01 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase;Chondroitin AC/alginate lyase 0.6693 84 384 1.50.10.100
4f13B00 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase;Chondroitin AC/alginate lyase 0.5963 28 387 1.50.10.100
af_Q9UL01_40_379_1.50.10.100 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase;Chondroitin AC/alginate lyase 0.5732 29 387 1.50.10.100
ID Description Score Start End GO Terms
AF-A0A1G0UUP1-F1-model_v4 Alginate lyase 0.987 103 387 GO:0016829
GO:0042597
AF-A0A2V7VJH4-F1-model_v4 Alginate lyase 0.9842 26 385 GO:0016829
GO:0042597
AF-A0A2V9YMS1-F1-model_v4 Alginate lyase 0.9829 35 386 GO:0016829
GO:0042597
AF-Q01XX4-F1-model_v4 Alginate lyase domain-containing protein 0.982 23 386 GO:0016829
GO:0042597
AF-A0A522ANZ4-F1-model_v4 Alginate lyase 0.9808 191 387 GO:0016829
GO:0042597

Feature Viewer

pLDDT pTM Quality
87.37 0.88 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map