F367783

General Info

Members Datasets Scaffolds Average Seq Length
258 223 516 269

Family's Representative Sequence

Representative Sequence 3300003578|Ga0006562J51391_1040152|Ga0006562J51391_10401523
Length 273
Sequence MTAHGASREAFAAARERLDALTDSTSVDAAQLADELAAVTALLDREVSLRRVLTDPAQAGEAKAELVQRLLGAQISGATADLVSGTVRSRWSQSRDLVDVLEELANIADLTAAQKAGRLDNVEDELFRFGRIVSSNTELRAALTNRKATASAKGELLRSLLGGRADAATERLVTRLVTAPRGRSLEAGLESLSRLAAERRDRMVAVVTSAVPLSDPQKQRLGAALAKLYGRPMHLNLDVDPAVLGGIRVQVGDEVINGSLADRIEDAARRMAN

Samples

Sample ID Description Type Environment
1 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
6 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
7 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
8 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
9 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
10 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
11 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
12 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
13 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
14 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
15 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
16 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
17 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
18 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
19 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
20 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
21 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
22 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
23 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
24 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
25 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
31 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
32 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
33 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
34 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
35 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
36 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
37 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
38 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
39 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
40 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
41 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
42 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
43 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
44 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
45 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
46 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
47 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
48 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
49 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
50 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
51 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
52 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
53 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
54 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
55 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
56 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
57 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
58 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
59 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
60 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
61 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
62 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
63 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
64 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
65 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
66 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
69 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
70 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
71 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
72 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
73 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
74 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
75 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
76 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
77 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
78 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
79 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
80 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
81 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
82 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
83 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
84 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
85 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
86 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
87 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
88 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
89 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
90 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
91 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
92 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
93 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
94 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
95 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
96 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
97 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
98 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
99 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
100 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
101 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
102 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
103 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
104 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
105 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
106 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
107 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
108 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
109 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
112 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
113 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
114 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
115 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
116 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
117 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
118 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
121 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
122 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
123 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
124 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
125 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
126 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
130 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
131 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
132 3300049129 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
133 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
134 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
135 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
136 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
137 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
138 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
139 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
140 3300049529 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
142 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
143 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
144 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
145 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
146 3300049536 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
147 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
148 3300049540 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
149 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
153 3300059605 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 71R_SD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
154 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
155 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
156 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
157 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
158 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
159 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
160 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
161 2643221578 Streptomyces sp. Root63 Isolate Unclassified
162 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
163 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
164 2643221647 Streptomyces sp. Root369 Isolate Unclassified
165 2643221670 Streptomyces sp. Root431 Isolate Unclassified
166 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
167 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
168 2643221714 Streptomyces sp. Root264 Isolate Unclassified
169 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
170 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
171 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
172 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
173 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
174 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
175 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
176 2808606448 Streptomyces sp. 193411 Isolate Unclassified
177 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
178 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
179 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
180 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
181 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
182 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
183 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
184 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
185 2862574272 Streptomyces sp. AcE210 Isolate Nodule
186 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
187 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
188 2867428634 Streptomyces sp. RP5T Isolate Unclassified
189 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
190 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
191 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
192 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
193 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
194 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
195 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
196 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
197 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
198 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
199 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
200 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
201 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
202 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
203 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
204 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
205 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
206 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
207 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
208 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
209 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
210 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
211 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
212 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
213 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
214 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
215 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
216 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
217 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
218 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
219 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
220 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
221 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
222 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
223 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 64.34
Metatranscriptomes 8.91
Isolates 26.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.94
Nodule 1.16
Rhizoplane 2.71
Rhizosphere 77.91
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1040152 3300003578 Bacteria 2440
2 rootH1_10029280 3300003316 Bacteria 3503
3 rootL2_10072879 3300003322 Bacteria 5730
4 rootH1_10018600 3300003323 Bacteria 2188
5 Ga0006562J51391_1117373 3300003578 Bacteria 1140
6 Ga0075365_10040147 3300006038 Bacteria 3051
7 Ga0075363_100003775 3300006048 Bacteria 6526
8 Ga0075370_10255081 3300006353 Bacteria 1040
9 Ga0097620_100211045 3300006931 Bacteria 2028
10 Ga0105250_10062705 3300009092 Bacteria 1496
11 Ga0105245_10211126 3300009098 Bacteria 1868
12 Ga0114129_10253564 3300009147 Bacteria 2361
13 Ga0105243_10076971 3300009148 Bacteria 2712
14 Ga0105248_10312682 3300009177 Bacteria 1769
15 Ga0105238_10402013 3300009551 Bacteria 1363
16 Ga0105246_10379034 3300011119 Bacteria 1168
17 Ga0105246_10501813 3300011119 Bacteria 1031
18 Ga0157375_10718822 3300013308 Bacteria 1152
19 Ga0182008_10000936 3300014497 Bacteria 20326
20 Ga0182006_1010126 3300015261 Bacteria 4200
21 Ga0182007_10001027 3300015262 Bacteria 15273
22 Ga0182005_1003555 3300015265 Bacteria 5261
23 Ga0183367_1002 3300015688 Bacteria 1101531
24 Ga0213875_10004773 3300021388 Bacteria 7376
25 Ga0224712_10036439 3300022467 Bacteria 1823
26 Ga0209758_1001875 3300025297 Bacteria 23033
27 Ga0207647_10030956 3300025904 Bacteria 3448
28 Ga0207694_10327125 3300025924 Bacteria 1266
29 Ga0207687_10095789 3300025927 Bacteria 2174
30 Ga0207639_10723459 3300026041 Bacteria 924
31 Ga0207683_10435123 3300026121 Bacteria 1209
32 Ga0209371_1037056 3300027312 Bacteria 1015
33 Ga0307515_10004012 3300028794 Bacteria 30728
34 Ga0307515_10202724 3300028794 Bacteria 1854
35 Ga0268256_1037861 3300030500 Bacteria 1101
36 Ga0307512_10023471 3300030522 Bacteria 5510
37 Ga0307513_10103650 3300031456 Bacteria 2860
38 Ga0307513_10120964 3300031456 Bacteria 2586
39 Ga0307508_10003293 3300031616 Bacteria 16460
40 Ga0307508_10030839 3300031616 Bacteria 4845
41 Ga0307514_10057109 3300031649 Bacteria 2991
42 Ga0307410_10199925 3300031852 Bacteria 1525
43 Ga0395900_0373905 3300037418 Bacteria 1394
44 Ga0395898_0015217 3300037466 Bacteria 7898
45 Ga0436364_0473068 3300037853 Bacteria 15750
46 Ga0395901_0006885 3300038443 Bacteria 11482
47 Ga0439436_0001286 3300041404 Bacteria 7174
48 Ga0439439_0007270 3300041406 Bacteria 2586
49 Ga0451837_0563102 3300041494 Bacteria 3397
50 Ga0439433_0008083 3300041999 Bacteria 2277
51 Ga0439442_011273 3300042002 Bacteria 1818
52 Ga0439432_022003 3300042006 Bacteria 2109
53 Ga0439449_0003166 3300042007 Bacteria 6409
54 Ga0439449_0010816 3300042007 Bacteria 3444
55 Ga0439449_0012094 3300042007 Bacteria 3244
56 Ga0439457_000419 3300042014 Bacteria 12192
57 Ga0450894_000170 3300042131 Bacteria 11533
58 Ga0450896_000059 3300042133 Bacteria 7027
59 Ga0450899_003474 3300042135 Bacteria 1693
60 Ga0450902_014428 3300042137 Bacteria 1278
61 Ga0450903_000144 3300042138 Bacteria 15642
62 Ga0450906_000444 3300042145 Bacteria 8627
63 Ga0439458_0002261 3300042157 Bacteria 4740
64 Ga0450908_002644 3300042184 Bacteria 3514
65 Ga0466969_0022071 3300044656 Bacteria 3290
66 Ga0466972_0004214 3300044658 Bacteria 7185
67 Ga0466972_0013364 3300044658 Bacteria 4122
68 Ga0466972_0115669 3300044658 Bacteria 1266
69 Ga0466965_0147249 3300044683 Bacteria 1229
70 Ga0466966_0005731 3300044684 Bacteria 8174
71 Ga0466961_0023473 3300044693 Bacteria 3968
72 Ga0466968_0013254 3300044735 Bacteria 3240
73 Ga0466970_0066487 3300044765 Bacteria 1935
74 Ga0466970_0081616 3300044765 Bacteria 1748
75 Ga0466960_0002784 3300044901 Bacteria 6626
76 Ga0466959_0118787 3300045049 Bacteria 1881
77 Ga0466967_0335181 3300045976 Bacteria 1461
78 Ga0495617_001480 3300046452 Bacteria 10272
79 Ga0495603_0002077 3300046455 Bacteria 11783
80 Ga0495603_0043500 3300046455 Bacteria 2681
81 Ga0495603_0133602 3300046455 Bacteria 1444
82 Ga0495629_0008726 3300046459 Bacteria 7454
83 Ga0495629_0104306 3300046459 Bacteria 1977
84 Ga0495638_0056073 3300046460 Bacteria 2445
85 Ga0495651_0081386 3300046462 Bacteria 2444
86 Ga0495605_0001651 3300046474 Bacteria 14340
87 Ga0495605_0186964 3300046474 Bacteria 908
88 Ga0495585_0034998 3300046492 Bacteria 2840
89 Ga0495585_0104602 3300046492 Bacteria 1510
90 Ga0495594_0038786 3300046499 Bacteria 2602
91 Ga0495596_0013823 3300046500 Bacteria 3412
92 Ga0495583_0053277 3300046506 Bacteria 1836
93 Ga0495583_0193925 3300046506 Bacteria 827
94 Ga0495606_0090085 3300046507 Bacteria 1888
95 Ga0495610_0063497 3300046512 Bacteria 1749
96 Ga0495616_0007544 3300046513 Bacteria 6510
97 Ga0495618_0120981 3300046514 Bacteria 1676
98 Ga0495620_0096242 3300046515 Bacteria 1183
99 Ga0495620_0099920 3300046515 Bacteria 1157
100 Ga0495628_0082340 3300046516 Bacteria 2499
101 Ga0495630_0422722 3300046517 Bacteria 1021
102 Ga0495631_0002525 3300046518 Bacteria 10281
103 Ga0495643_0010397 3300046522 Bacteria 5729
104 Ga0495666_0008308 3300046526 Bacteria 5202
105 Ga0495642_0138635 3300046528 Bacteria 1049
106 Ga0495652_0104590 3300046529 Bacteria 2289
107 Ga0495640_0211883 3300046533 Bacteria 1224
108 Ga0495609_0007313 3300046538 Bacteria 5526
109 Ga0495645_0254403 3300046543 Bacteria 1166
110 Ga0495622_0014735 3300046557 Bacteria 3631
111 Ga0495622_0087203 3300046557 Bacteria 1435
112 Ga0495656_0125216 3300046615 Bacteria 1217
113 Ga0495668_0072733 3300046616 Bacteria 1888
114 Ga0495634_0213788 3300046642 Bacteria 1192
115 Ga0495611_0012280 3300046648 Bacteria 3642
116 Ga0495611_0062156 3300046648 Bacteria 1698
117 Ga0495611_0246479 3300046648 Bacteria 828
118 Ga0495625_0085506 3300046660 Bacteria 2189
119 Ga0495661_0013277 3300046665 Bacteria 5537
120 Ga0495657_0069685 3300046675 Bacteria 2300
121 Ga0495657_0080666 3300046675 Bacteria 2105
122 Ga0495599_0058981 3300046678 Bacteria 2401
123 Ga0495623_0023543 3300046679 Bacteria 3975
124 Ga0495623_0026382 3300046679 Bacteria 3740
125 Ga0495613_0000571 3300046689 Bacteria 30034
126 Ga0495624_0159245 3300046690 Bacteria 1379
127 Ga0495649_0029823 3300046694 Bacteria 3014
128 Ga0495589_0087853 3300046794 Bacteria 1509
129 Ga0495589_0208861 3300046794 Bacteria 919
130 Ga0495600_0073598 3300046809 Bacteria 2231
131 Ga0495604_0023933 3300047317 Bacteria 4875
132 Ga0495604_0411904 3300047317 Bacteria 888
133 Ga0495636_0027273 3300047318 Bacteria 2327
134 Ga0495636_0027759 3300047318 Bacteria 2305
135 Ga0495636_0118914 3300047318 Bacteria 1167
136 Ga0495674_0495055 3300047319 Bacteria 978
137 Ga0495676_0035703 3300047321 Bacteria 4156
138 Ga0495676_0070262 3300047321 Bacteria 2697
139 Ga0495680_0011373 3300047322 Bacteria 7879
140 Ga0495683_0125786 3300047323 Bacteria 1213
141 Ga0495687_045368 3300047443 Bacteria 1903
142 Ga0495675_0003140 3300047444 Bacteria 9915
143 Ga0495675_0107998 3300047444 Bacteria 1738
144 Ga0495677_0029334 3300047445 Bacteria 2000
145 Ga0495685_003567 3300047447 Bacteria 4976
146 Ga0495685_017305 3300047447 Bacteria 2467
147 Ga0495685_033037 3300047447 Bacteria 1777
148 Ga0495685_034699 3300047447 Bacteria 1733
149 Ga0495685_086923 3300047447 Bacteria 1038
150 Ga0495684_0079089 3300047471 Bacteria 2496
151 Ga0495686_0050665 3300047472 Bacteria 2608
152 Ga0495602_0214226 3300048088 Bacteria 1459
153 Ga0495614_0000863 3300048089 Bacteria 12821
154 Ga0495615_0025721 3300048090 Bacteria 1369
155 Ga0495626_0062661 3300048091 Bacteria 1688
156 Ga0496105_0140026 3300048908 Bacteria 1992
157 Ga0496106_0094241 3300048909 Bacteria 2315
158 Ga0496108_0342795 3300048911 Bacteria 1304
159 Ga0496109_0047107 3300048912 Bacteria 3918
160 Ga0496112_0437077 3300048915 Bacteria 1247
161 Ga0496114_0257733 3300048917 Bacteria 1535
162 Ga0496126_0236025 3300048929 Bacteria 1530
163 Ga0501306_001732 3300049127 Bacteria 2120
164 Ga0501309_000391 3300049129 Bacteria 3410
165 Ga0501309_005073 3300049129 Bacteria 1555
166 Ga0501310_001701 3300049130 Bacteria 2024
167 Ga0501310_004511 3300049130 Bacteria 1401
168 Ga0501305_001073 3300049161 Bacteria 2554
169 Ga0501307_000376 3300049162 Bacteria 2908
170 Ga0495678_020553 3300049459 Bacteria 2919
171 Ga0495682_0070433 3300049460 Bacteria 1259
172 Ga0501311_002739 3300049527 Bacteria 1721
173 Ga0501312_001116 3300049528 Bacteria 2523
174 Ga0501313_000461 3300049529 Bacteria 2775
175 Ga0501314_000384 3300049530 Bacteria 2698
176 Ga0501315_000117 3300049531 Bacteria 4270
177 Ga0501316_000115 3300049532 Bacteria 4133
178 Ga0501317_000313 3300049533 Bacteria 3206
179 Ga0501318_000257 3300049534 Bacteria 3021
180 Ga0501320_000248 3300049536 Bacteria 2859
181 Ga0501323_000012 3300049539 Bacteria 9246
182 Ga0501323_004925 3300049539 Bacteria 1437
183 Ga0501324_004543 3300049540 Bacteria 1106
184 Ga0501036_0016950 3300049572 Bacteria 6086
185 Ga0501070_0319059 3300049586 Bacteria 1264
186 Ga0501035_0401033 3300049822 Bacteria 1141
187 nmdc:mga0yw44_100829_c1 3300050492 Bacteria 1839
188 Ga0587106_002239 3300059605 Bacteria 1868
189 Ga0466962_0075857 3300061719 Bacteria 1607
190 2547408408 2547132111 Bacteria 8013147
191 2554256239 2554235005 Bacteria 6457341
192 2585309040 2582581313 Bacteria 10042643
193 2585319230 2582581314 Bacteria 11452267
194 2616697284 2616644814 Bacteria 11555299
195 2616899925 2616644941 Bacteria 8510691
196 2643902275 2643221578 Bacteria 9213798
197 2644017678 2643221601 Bacteria 7493239
198 2644173362 2643221631 Bacteria 8168043
199 2644265821 2643221647 Bacteria 10741251
200 2644386882 2643221670 Bacteria 6497041
201 2644403845 2643221673 Bacteria 9196637
202 2644440039 2643221678 Bacteria 9540101
203 2644632636 2643221714 Bacteria 9015452
204 2768643035 2767802112 Bacteria 6465194
205 2784590397 2784132148 Bacteria 8627943
206 2785371486 2784746768 Bacteria 10036182
207 2786672645 2786546132 Bacteria 10419719
208 2793977053 2791355406 Bacteria 11364898
209 2808844017 2808606359 Bacteria 9866990
210 2808913608 2808606375 Bacteria 9466072
211 2809234071 2808606448 Bacteria 8656184
212 2812355959 2811994879 Bacteria 9313447
213 2812478768 2811994917 Bacteria 7761064
214 2819740643 2818991472 Bacteria 10089953
215 2852641008 2852635781 Bacteria 8251373
216 2862186397 2862178590 Bacteria 8583590
217 2862284763 2862281513 Bacteria 9621493
218 2862291073 2862290372 Bacteria 7471434
219 2862388099 2862382967 Bacteria 10317375
220 2862577523 2862574272 Bacteria 10567477
221 2862707151 2862705112 Bacteria 6563286
222 2863408596 2863404153 Bacteria 9672205
223 2867430555 2867428634 Bacteria 9590268
224 2875396681 2875391855 Bacteria 7600475
225 2877679117 2877676314 Bacteria 9512378
226 2912717629 2912715099 Bacteria 9460473
227 2912730182 2912723979 Bacteria 8557534
228 2918506491 2918501144 Bacteria 8668083
229 2919471722 2919468124 Bacteria 9133025
230 2946047874 2946045630 Bacteria 8527308
231 2946069828 2946064051 Bacteria 8957905
232 2946077749 2946072368 Bacteria 8999607
233 2947226972 2947224130 Bacteria 9938529
234 2954005457 2954002825 Bacteria 9173742
235 2954384021 2954380949 Bacteria 10050426
236 2954678937 2954673503 Bacteria 9685905
237 2954685214 2954682443 Bacteria 9862841
238 2954694820 2954691527 Bacteria 10720516
239 2954710022 2954701450 Bacteria 10834262
240 2954714332 2954711539 Bacteria 10867210
241 2954724281 2954721474 Bacteria 10456478
242 2954737558 2954731030 Bacteria 10243860
243 2954743178 2954740390 Bacteria 10229294
244 2954756392 2954749733 Bacteria 10366972
245 2954762136 2954759201 Bacteria 9358192
246 2990046195 2990044586 Bacteria 6603797
247 2997452850 2997451912 Bacteria 8492419
248 3006429907 3006425503 Bacteria 6491253
249 3006491304 3006486233 Bacteria 8157040
250 3006500106 3006493962 Bacteria 8825450
251 8008491515 8008485437 Bacteria 7198341
252 8008562771 8008558824 Bacteria 10610750
253 8023627176 8023623736 Bacteria 8593882
254 8025524571 8025524527 Bacteria 7197316
255 8047896118 8047893842 Bacteria 11723082
256 8048362816 8048356638 Bacteria 11044339
257 8048373144 8048369669 Bacteria 11666822
258 8048382077 8048379754 Bacteria 11877923
259 Ga0006562J51391_1040152
260 rootH1_10029280
261 rootL2_10072879
262 rootH1_10018600
263 Ga0006562J51391_1117373
264 Ga0075365_10040147
265 Ga0075363_100003775
266 Ga0075370_10255081
267 Ga0097620_100211045
268 Ga0105250_10062705
269 Ga0105245_10211126
270 Ga0114129_10253564
271 Ga0105243_10076971
272 Ga0105248_10312682
273 Ga0105238_10402013
274 Ga0105246_10379034
275 Ga0105246_10501813
276 Ga0157375_10718822
277 Ga0182008_10000936
278 Ga0182006_1010126
279 Ga0182007_10001027
280 Ga0182005_1003555
281 Ga0183367_1002
282 Ga0213875_10004773
283 Ga0224712_10036439
284 Ga0209758_1001875
285 Ga0207647_10030956
286 Ga0207694_10327125
287 Ga0207687_10095789
288 Ga0207639_10723459
289 Ga0207683_10435123
290 Ga0209371_1037056
291 Ga0307515_10004012
292 Ga0307515_10202724
293 Ga0268256_1037861
294 Ga0307512_10023471
295 Ga0307513_10103650
296 Ga0307513_10120964
297 Ga0307508_10003293
298 Ga0307508_10030839
299 Ga0307514_10057109
300 Ga0307410_10199925
301 Ga0395900_0373905
302 Ga0395898_0015217
303 Ga0436364_0473068
304 Ga0395901_0006885
305 Ga0439436_0001286
306 Ga0439439_0007270
307 Ga0451837_0563102
308 Ga0439433_0008083
309 Ga0439442_011273
310 Ga0439432_022003
311 Ga0439449_0003166
312 Ga0439449_0010816
313 Ga0439449_0012094
314 Ga0439457_000419
315 Ga0450894_000170
316 Ga0450896_000059
317 Ga0450899_003474
318 Ga0450902_014428
319 Ga0450903_000144
320 Ga0450906_000444
321 Ga0439458_0002261
322 Ga0450908_002644
323 Ga0466969_0022071
324 Ga0466972_0004214
325 Ga0466972_0013364
326 Ga0466972_0115669
327 Ga0466965_0147249
328 Ga0466966_0005731
329 Ga0466961_0023473
330 Ga0466968_0013254
331 Ga0466970_0066487
332 Ga0466970_0081616
333 Ga0466960_0002784
334 Ga0466959_0118787
335 Ga0466967_0335181
336 Ga0495617_001480
337 Ga0495603_0002077
338 Ga0495603_0043500
339 Ga0495603_0133602
340 Ga0495629_0008726
341 Ga0495629_0104306
342 Ga0495638_0056073
343 Ga0495651_0081386
344 Ga0495605_0001651
345 Ga0495605_0186964
346 Ga0495585_0034998
347 Ga0495585_0104602
348 Ga0495594_0038786
349 Ga0495596_0013823
350 Ga0495583_0053277
351 Ga0495583_0193925
352 Ga0495606_0090085
353 Ga0495610_0063497
354 Ga0495616_0007544
355 Ga0495618_0120981
356 Ga0495620_0096242
357 Ga0495620_0099920
358 Ga0495628_0082340
359 Ga0495630_0422722
360 Ga0495631_0002525
361 Ga0495643_0010397
362 Ga0495666_0008308
363 Ga0495642_0138635
364 Ga0495652_0104590
365 Ga0495640_0211883
366 Ga0495609_0007313
367 Ga0495645_0254403
368 Ga0495622_0014735
369 Ga0495622_0087203
370 Ga0495656_0125216
371 Ga0495668_0072733
372 Ga0495634_0213788
373 Ga0495611_0012280
374 Ga0495611_0062156
375 Ga0495611_0246479
376 Ga0495625_0085506
377 Ga0495661_0013277
378 Ga0495657_0069685
379 Ga0495657_0080666
380 Ga0495599_0058981
381 Ga0495623_0023543
382 Ga0495623_0026382
383 Ga0495613_0000571
384 Ga0495624_0159245
385 Ga0495649_0029823
386 Ga0495589_0087853
387 Ga0495589_0208861
388 Ga0495600_0073598
389 Ga0495604_0023933
390 Ga0495604_0411904
391 Ga0495636_0027273
392 Ga0495636_0027759
393 Ga0495636_0118914
394 Ga0495674_0495055
395 Ga0495676_0035703
396 Ga0495676_0070262
397 Ga0495680_0011373
398 Ga0495683_0125786
399 Ga0495687_045368
400 Ga0495675_0003140
401 Ga0495675_0107998
402 Ga0495677_0029334
403 Ga0495685_003567
404 Ga0495685_017305
405 Ga0495685_033037
406 Ga0495685_034699
407 Ga0495685_086923
408 Ga0495684_0079089
409 Ga0495686_0050665
410 Ga0495602_0214226
411 Ga0495614_0000863
412 Ga0495615_0025721
413 Ga0495626_0062661
414 Ga0496105_0140026
415 Ga0496106_0094241
416 Ga0496108_0342795
417 Ga0496109_0047107
418 Ga0496112_0437077
419 Ga0496114_0257733
420 Ga0496126_0236025
421 Ga0501306_001732
422 Ga0501309_000391
423 Ga0501309_005073
424 Ga0501310_001701
425 Ga0501310_004511
426 Ga0501305_001073
427 Ga0501307_000376
428 Ga0495678_020553
429 Ga0495682_0070433
430 Ga0501311_002739
431 Ga0501312_001116
432 Ga0501313_000461
433 Ga0501314_000384
434 Ga0501315_000117
435 Ga0501316_000115
436 Ga0501317_000313
437 Ga0501318_000257
438 Ga0501320_000248
439 Ga0501323_000012
440 Ga0501323_004925
441 Ga0501324_004543
442 Ga0501036_0016950
443 Ga0501070_0319059
444 Ga0501035_0401033
445 nmdc:mga0yw44_100829_c1
446 Ga0587106_002239
447 Ga0466962_0075857
448 2547408408
449 2554256239
450 2585309040
451 2585319230
452 2616697284
453 2616899925
454 2643902275
455 2644017678
456 2644173362
457 2644265821
458 2644386882
459 2644403845
460 2644440039
461 2644632636
462 2768643035
463 2784590397
464 2785371486
465 2786672645
466 2793977053
467 2808844017
468 2808913608
469 2809234071
470 2812355959
471 2812478768
472 2819740643
473 2852641008
474 2862186397
475 2862284763
476 2862291073
477 2862388099
478 2862577523
479 2862707151
480 2863408596
481 2867430555
482 2875396681
483 2877679117
484 2912717629
485 2912730182
486 2918506491
487 2919471722
488 2946047874
489 2946069828
490 2946077749
491 2947226972
492 2954005457
493 2954384021
494 2954678937
495 2954685214
496 2954694820
497 2954710022
498 2954714332
499 2954724281
500 2954737558
501 2954743178
502 2954756392
503 2954762136
504 2990046195
505 2997452850
506 3006429907
507 3006491304
508 3006500106
509 8008491515
510 8008562771
511 8023627176
512 8025524571
513 8047896118
514 8048362816
515 8048373144
516 8048382077

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00213

OSCP

ATP synthase delta (OSCP) subunit

107

271

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6m6v-assembly1.cif.gz_A crystal structure the toxin-antitoxin mnta-hept 0.8449 174 210
6m6u-assembly1.cif.gz_A crystal structure the toxin-antitoxin mnta-hpet mutant-d39ed41e 0.8294 175 210
6m6u-assembly1.cif.gz_F crystal structure the toxin-antitoxin mnta-hpet mutant-d39ed41e 0.8289 175 210
6m6w-assembly1.cif.gz_A crystal structure the toxin-antitoxin mnta-hpet mutant-y104a 0.8154 172 210
7aer-assembly1.cif.gz_A rebuilt and re-refined pdb entry 5yep: tri-ampylated shewanella oneidensis hepn toxin in complex with mnt antitoxin 0.808 174 210
ID Description Score Start End Superfamily
af_Q2FWE7_104_179_3.30.2320.30 Alpha Beta;2-Layer Sandwich;hypothetical protein PF0899 fold;ATP synthase, E subunit, C-terminal 0.9385 175 221 3.30.2320.30
af_P0ABA4_107_177_3.30.2320.30 Alpha Beta;2-Layer Sandwich;hypothetical protein PF0899 fold;ATP synthase, E subunit, C-terminal 0.9009 177 222 3.30.2320.30
af_Q84R40_123_196_3.30.2320.30 Alpha Beta;2-Layer Sandwich;hypothetical protein PF0899 fold;ATP synthase, E subunit, C-terminal 0.8801 175 220 3.30.2320.30
af_I1MUQ0_165_253_3.30.2320.30 Alpha Beta;2-Layer Sandwich;hypothetical protein PF0899 fold;ATP synthase, E subunit, C-terminal 0.8739 168 220 3.30.2320.30
af_Q0IZQ8_101_346_3.40.50.1440 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Tubulin/FtsZ, GTPase domain 0.8319 174 220 3.40.50.1440
ID Description Score Start End GO Terms
AF-A0A6B3CGE0-F1-model_v4 F0F1 ATP synthase subunit delta 0.9925 12 95
AF-A0A6B3HKP0-F1-model_v4 F0F1 ATP synthase subunit delta 0.9836 1 108 GO:0016020
GO:0046933
AF-A0A6B3HKP0-F1-model_v4 F0F1 ATP synthase subunit delta 0.9658 1 108 GO:0016020
GO:0046933
AF-A0A6B3CGE0-F1-model_v4 F0F1 ATP synthase subunit delta 0.9477 12 95
AF-A0A6G3XFV7-F1-model_v4 F0F1 ATP synthase subunit delta 0.9363 18 128 GO:0016020
GO:0046933

Map