F367360

General Info

Members Datasets Scaffolds Average Seq Length
257 173 514 250

Family's Representative Sequence

Representative Sequence 3300025932|Ga0207690_10074604|Ga0207690_100746043
Length 278
Sequence MRSPGSESGGPHGKSHSSKVIPKTLKLLTLARDLKRRKARERSGLFVAEGVRGVEELLRSSLAIRGVLTAPQLGDAPRGSLLLQSLASRPDVPAAELSERDFASAAETESPQGVLAIAEIPQRSLTDFISATPLTLLVLDAVQDPGNVGTIVRTAAALAATATVALPGTVDLWNAKVVRSGMGTHFFHPAFHATAEELEGFLAATGTPLWGADAKGDPIGSRRRPERLALAVGNEGSGLTVAIRDRADALVALPIASDVESLNVAVAAGILLHTLRFQ

Samples

Sample ID Description Type Environment
1 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
25 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
72 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
113 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
114 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
115 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
116 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
117 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
118 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
122 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
123 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
124 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
125 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
126 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
127 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
128 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
129 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
130 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
131 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
132 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
133 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
134 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
135 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
136 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
137 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
138 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
139 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
140 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
141 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
142 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
143 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
144 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
145 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
146 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
147 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
148 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
149 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
150 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
151 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
152 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
153 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
154 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
155 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
156 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
157 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
158 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
159 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
160 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
161 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
162 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
169 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
170 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
171 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
172 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
173 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.61
Metatranscriptomes 0.39
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.78
Rhizosphere 97.28
Stem 0
Stem Tuber 0
Unclassified 14.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207690_10074604 3300025932 Bacteria 2350
2 JGI25406J46586_10011844 3300003203 Bacteria 3808
3 rootL2_10304183 3300003322 Bacteria 1137
4 Ga0065715_10090194 3300005293 Bacteria 7475
5 Ga0070658_10011561 3300005327 Bacteria 7081
6 Ga0070658_10056936 3300005327 Bacteria 3179
7 Ga0070658_10072592 3300005327 Unclassified 2821
8 Ga0070658_10127075 3300005327 Bacteria 2122
9 Ga0070658_10146136 3300005327 Bacteria 1977
10 Ga0070676_10115401 3300005328 Bacteria 1678
11 Ga0070676_10266789 3300005328 Unclassified 1148
12 Ga0070683_100000801 3300005329 Bacteria 23280
13 Ga0070683_100059501 3300005329 Bacteria 3550
14 Ga0070683_100119101 3300005329 Bacteria 2493
15 Ga0070683_100145603 3300005329 Bacteria 2245
16 Ga0070670_100184289 3300005331 Bacteria 1812
17 Ga0070680_100006480 3300005336 Bacteria 8903
18 Ga0070680_100024305 3300005336 Bacteria 4838
19 Ga0070680_100076109 3300005336 Bacteria 2763
20 Ga0070680_100324202 3300005336 Unclassified 1308
21 Ga0070682_100002165 3300005337 Bacteria 10903
22 Ga0070682_100009201 3300005337 Bacteria 5585
23 Ga0068868_100082993 3300005338 Bacteria 2571
24 Ga0070660_100050957 3300005339 Bacteria 3186
25 Ga0070660_100115303 3300005339 Bacteria 2141
26 Ga0070660_100158354 3300005339 Unclassified 1824
27 Ga0070687_100261245 3300005343 Bacteria 1081
28 Ga0070661_100038922 3300005344 Bacteria 3463
29 Ga0070668_100093502 3300005347 Bacteria 2373
30 Ga0070668_100348555 3300005347 Unclassified 1253
31 Ga0070669_100130693 3300005353 Bacteria 1926
32 Ga0070675_100067099 3300005354 Bacteria 2968
33 Ga0070675_100308563 3300005354 Bacteria 1395
34 Ga0070674_100092053 3300005356 Unclassified 2191
35 Ga0070673_100037010 3300005364 Unclassified 3715
36 Ga0070688_100074709 3300005365 Archaea 2177
37 Ga0070659_100015626 3300005366 Bacteria 5685
38 Ga0070667_100163699 3300005367 Unclassified 1961
39 Ga0070714_100010840 3300005435 Bacteria 7220
40 Ga0070713_100501940 3300005436 Bacteria 1145
41 Ga0070710_10330207 3300005437 Bacteria 1004
42 Ga0070708_100018569 3300005445 Bacteria 5821
43 Ga0070708_100054312 3300005445 Bacteria 3557
44 Ga0070681_10002337 3300005458 Bacteria 17349
45 Ga0070681_10059888 3300005458 Bacteria 3787
46 Ga0070681_10107129 3300005458 Bacteria 2736
47 Ga0070707_100016543 3300005468 Bacteria 6923
48 Ga0070707_100281742 3300005468 Bacteria 1615
49 Ga0070698_100106939 3300005471 Bacteria 2766
50 Ga0070699_100081609 3300005518 Unclassified 2819
51 Ga0070699_100081741 3300005518 Bacteria 2816
52 Ga0070679_100000774 3300005530 Bacteria 27774
53 Ga0070679_100028092 3300005530 Bacteria 5544
54 Ga0070679_100094423 3300005530 Bacteria 2978
55 Ga0070679_100259507 3300005530 Unclassified 1693
56 Ga0070679_100364297 3300005530 Unclassified 1393
57 Ga0070684_100115002 3300005535 Bacteria 2415
58 Ga0070684_100124734 3300005535 Bacteria 2319
59 Ga0070697_100012013 3300005536 Bacteria 6778
60 Ga0068853_100102242 3300005539 Bacteria 2536
61 Ga0068853_100444297 3300005539 Unclassified 1219
62 Ga0070695_100020329 3300005545 Bacteria 4053
63 Ga0070696_100069244 3300005546 Bacteria 2479
64 Ga0070693_100007071 3300005547 Bacteria 5468
65 Ga0070704_100135542 3300005549 Bacteria 1915
66 Ga0068855_100118181 3300005563 Bacteria 3037
67 Ga0068855_100151129 3300005563 Bacteria 2640
68 Ga0070664_100078573 3300005564 Bacteria 2839
69 Ga0070664_100140661 3300005564 Bacteria 2125
70 Ga0068856_100011967 3300005614 Bacteria 8402
71 Ga0068856_100948074 3300005614 Bacteria 879
72 Ga0068852_100044473 3300005616 Bacteria 3771
73 Ga0068852_100077703 3300005616 Bacteria 2935
74 Ga0068852_100316274 3300005616 Bacteria 1515
75 Ga0068859_100194699 3300005617 Unclassified 2111
76 Ga0068859_100296134 3300005617 Bacteria 1711
77 Ga0068864_100220665 3300005618 Unclassified 1749
78 Ga0068866_10110192 3300005718 Unclassified 1534
79 Ga0068866_10200931 3300005718 Bacteria 1191
80 Ga0068862_100114525 3300005844 Bacteria 2370
81 Ga0081539_10001894 3300005985 Bacteria 32437
82 Ga0075430_100025731 3300006846 Bacteria 5007
83 Ga0075431_100061938 3300006847 Bacteria 3861
84 Ga0075429_100164016 3300006880 Bacteria 1946
85 Ga0075436_100131400 3300006914 Bacteria 1756
86 Ga0097620_100194705 3300006931 Unclassified 2111
87 Ga0097620_100296127 3300006931 Bacteria 1711
88 Ga0099794_10290947 3300007265 Unclassified 845
89 Ga0105240_10039646 3300009093 Bacteria 6030
90 Ga0105245_10076614 3300009098 Bacteria 3047
91 Ga0105245_10095900 3300009098 Bacteria 2736
92 Ga0105245_10120437 3300009098 Bacteria 2451
93 Ga0105245_10145797 3300009098 Bacteria 2234
94 Ga0114129_10421987 3300009147 Bacteria 1754
95 Ga0105241_10000058 3300009174 Bacteria 83780
96 Ga0105248_10038310 3300009177 Bacteria 5365
97 Ga0105248_10354907 3300009177 Unclassified 1651
98 Ga0105237_10166197 3300009545 Bacteria 2205
99 Ga0105238_10201163 3300009551 Bacteria 1967
100 Ga0105239_10160315 3300010375 Bacteria 2513
101 Ga0157373_10312342 3300013100 Bacteria 1117
102 Ga0157370_10196553 3300013104 Unclassified 1872
103 Ga0157370_10469706 3300013104 Bacteria 1156
104 Ga0157369_10006479 3300013105 Bacteria 13565
105 Ga0157369_10036916 3300013105 Bacteria 5352
106 Ga0157369_10113484 3300013105 Bacteria 2879
107 Ga0157374_10016868 3300013296 Bacteria 6426
108 Ga0157374_10095568 3300013296 Bacteria 2841
109 Ga0157378_10110482 3300013297 Bacteria 2520
110 Ga0163162_10518249 3300013306 Bacteria 1322
111 Ga0157372_10003332 3300013307 Bacteria 17350
112 Ga0157372_10014075 3300013307 Bacteria 8544
113 Ga0157372_10017306 3300013307 Bacteria 7739
114 Ga0157372_10146400 3300013307 Bacteria 2724
115 Ga0157372_10233809 3300013307 Unclassified 2131
116 Ga0157375_10022983 3300013308 Bacteria 5747
117 Ga0157375_10073111 3300013308 Bacteria 3447
118 Ga0206353_11011011 3300020082 Bacteria 1209
119 Ga0213876_10007570 3300021384 Bacteria 5898
120 Ga0207692_10269219 3300025898 Bacteria 1027
121 Ga0207645_10052483 3300025907 Archaea 2605
122 Ga0207643_10057387 3300025908 Archaea 2216
123 Ga0207705_10011774 3300025909 Bacteria 6321
124 Ga0207705_10053608 3300025909 Bacteria 2906
125 Ga0207705_10083601 3300025909 Unclassified 2329
126 Ga0207684_10085852 3300025910 Unclassified 2680
127 Ga0207654_10000213 3300025911 Bacteria 35692
128 Ga0207707_10000887 3300025912 Bacteria 29242
129 Ga0207707_10083366 3300025912 Bacteria 2791
130 Ga0207707_10125599 3300025912 Bacteria 2243
131 Ga0207693_10619007 3300025915 Bacteria 842
132 Ga0207663_10360094 3300025916 Bacteria 1103
133 Ga0207660_10016882 3300025917 Bacteria 4842
134 Ga0207660_10053806 3300025917 Bacteria 2871
135 Ga0207660_10356719 3300025917 Bacteria 1172
136 Ga0207657_10000850 3300025919 Bacteria 32258
137 Ga0207657_10097579 3300025919 Unclassified 2443
138 Ga0207649_10069901 3300025920 Bacteria 2237
139 Ga0207652_10016447 3300025921 Bacteria 6041
140 Ga0207652_10063288 3300025921 Bacteria 3199
141 Ga0207652_10071957 3300025921 Bacteria 3005
142 Ga0207652_10115892 3300025921 Bacteria 2380
143 Ga0207652_10143726 3300025921 Bacteria 2134
144 Ga0207646_10001934 3300025922 Bacteria 24862
145 Ga0207646_10024282 3300025922 Bacteria 5555
146 Ga0207681_10044061 3300025923 Unclassified 2989
147 Ga0207681_10075241 3300025923 Unclassified 2368
148 Ga0207659_10061150 3300025926 Archaea 2714
149 Ga0207659_10448590 3300025926 Unclassified 1086
150 Ga0207687_10100906 3300025927 Bacteria 2124
151 Ga0207687_10107960 3300025927 Bacteria 2060
152 Ga0207664_10019882 3300025929 Bacteria 4970
153 Ga0207644_10350157 3300025931 Bacteria 1199
154 Ga0207690_10146386 3300025932 Bacteria 1747
155 Ga0207686_10087307 3300025934 Unclassified 2051
156 Ga0207711_10251278 3300025941 Unclassified 1624
157 Ga0207711_10350508 3300025941 Bacteria 1367
158 Ga0207689_10074696 3300025942 Unclassified 2785
159 Ga0207661_10001536 3300025944 Bacteria 15685
160 Ga0207661_10046212 3300025944 Unclassified 3452
161 Ga0207661_10106911 3300025944 Bacteria 2359
162 Ga0207661_10120254 3300025944 Bacteria 2235
163 Ga0207679_10139650 3300025945 Bacteria 1957
164 Ga0207679_10200836 3300025945 Bacteria 1665
165 Ga0207667_10006901 3300025949 Bacteria 13716
166 Ga0207667_10122489 3300025949 Bacteria 2679
167 Ga0207651_10263907 3300025960 Bacteria 1415
168 Ga0207668_10536717 3300025972 Bacteria 1011
169 Ga0207640_10144655 3300025981 Bacteria 1738
170 Ga0207677_10169369 3300026023 Bacteria 1706
171 Ga0207639_10126701 3300026041 Bacteria 2107
172 Ga0207639_10224475 3300026041 Bacteria 1624
173 Ga0207708_10021354 3300026075 Bacteria 4882
174 Ga0207702_10009064 3300026078 Bacteria 8375
175 Ga0207702_10480403 3300026078 Bacteria 1209
176 Ga0207648_10092649 3300026089 Bacteria 2642
177 Ga0207648_10141238 3300026089 Bacteria 2122
178 Ga0207675_100143885 3300026118 Archaea 2266
179 Ga0207683_10483022 3300026121 Unclassified 1143
180 Ga0207698_10050254 3300026142 Bacteria 3179
181 Ga0207698_10120958 3300026142 Bacteria 2216
182 Ga0207698_10306492 3300026142 Bacteria 1481
183 Ga0207698_10568997 3300026142 Bacteria 1113
184 Ga0209996_1002296 3300027395 Unclassified 2361
185 Ga0268265_10319541 3300028380 Unclassified 1405
186 Ga0268264_10244880 3300028381 Unclassified 1662
187 Ga0307408_100016300 3300031548 Bacteria 4958
188 Ga0307405_10003796 3300031731 Bacteria 7019
189 Ga0307413_10003106 3300031824 Bacteria 6915
190 Ga0307410_10013534 3300031852 Bacteria 4763
191 Ga0307406_10002708 3300031901 Bacteria 9656
192 Ga0307407_10024765 3300031903 Bacteria 3152
193 Ga0307412_10000852 3300031911 Bacteria 17537
194 Ga0307409_100016409 3300031995 Bacteria 4898
195 Ga0307416_100222885 3300032002 Bacteria 1810
196 Ga0307416_100269390 3300032002 Bacteria 1671
197 Ga0307416_100360521 3300032002 Bacteria 1476
198 Ga0307414_10079707 3300032004 Bacteria 2391
199 Ga0307411_10000278 3300032005 Bacteria 16996
200 Ga0307415_100000583 3300032126 Bacteria 15899
201 Ga0373934_0018732 3300035086 Bacteria 2651
202 Ga0373923_0026011 3300035111 Bacteria 2325
203 Ga0373957_0036415 3300035120 Unclassified 1833
204 Ga0373924_0171930 3300035410 Bacteria 952
205 Ga0373935_0010719 3300035692 Bacteria 5506
206 Ga0373935_0363767 3300035692 Bacteria 1033
207 Ga0373927_0306532 3300035695 Bacteria 1045
208 Ga0373933_0241621 3300035724 Bacteria 1161
209 Ga0373947_0082658 3300035725 Bacteria 1991
210 Ga0373925_0358310 3300037068 Bacteria 1185
211 Ga0395899_0035987 3300037312 Bacteria 3715
212 Ga0395900_0027687 3300037418 Bacteria 5806
213 Ga0395905_0028888 3300037471 Bacteria 5227
214 Ga0395901_0005561 3300038443 Bacteria 12752
215 Ga0436365_0448875 3300039437 Bacteria 6848
216 Ga0436365_0677394 3300039437 Bacteria 1580
217 Ga0436365_1559730 3300039437 Bacteria 17058
218 Ga0466967_0023405 3300045976 Bacteria 5061
219 Ga0495592_0066704 3300046454 Bacteria 2633
220 Ga0495629_0153140 3300046459 Bacteria 1602
221 Ga0495651_0047209 3300046462 Bacteria 3331
222 Ga0495653_0005618 3300046463 Bacteria 10234
223 Ga0495580_0080270 3300046472 Bacteria 2274
224 Ga0495580_0143993 3300046472 Bacteria 1652
225 Ga0495639_0086214 3300046475 Bacteria 1468
226 Ga0495594_0038283 3300046499 Bacteria 2618
227 Ga0495594_0070628 3300046499 Bacteria 1941
228 Ga0495628_0009694 3300046516 Bacteria 8216
229 Ga0495630_0558828 3300046517 Bacteria 877
230 Ga0495666_0049902 3300046526 Bacteria 2012
231 Ga0495652_0015494 3300046529 Bacteria 6825
232 Ga0495665_0090110 3300046531 Bacteria 1611
233 Ga0495586_0114369 3300046535 Bacteria 1504
234 Ga0495587_0020119 3300046536 Bacteria 4123
235 Ga0495667_0164247 3300046559 Bacteria 1427
236 Ga0495635_0079777 3300046663 Bacteria 2240
237 Ga0495588_0139601 3300046674 Bacteria 1280
238 Ga0495599_0009776 3300046678 Bacteria 5870
239 Ga0495623_0249231 3300046679 Bacteria 999
240 Ga0495674_0037079 3300047319 Bacteria 4383
241 Ga0495672_0002563 3300047320 Bacteria 16551
242 Ga0495675_0009382 3300047444 Bacteria 6088
243 Ga0495684_0005406 3300047471 Bacteria 9943
244 Ga0495684_0349720 3300047471 Bacteria 1049
245 Ga0495602_0131675 3300048088 Bacteria 1993
246 Ga0496105_0070719 3300048908 Bacteria 2885
247 Ga0496112_0285530 3300048915 Unclassified 1597
248 Ga0501032_0058122 3300049569 Bacteria 2597
249 Ga0501070_0085825 3300049586 Bacteria 2606
250 Ga0501035_0131761 3300049822 Bacteria 2179
251 Ga0501044_0484310 3300049823 Unclassified 1140
252 nmdc:mga05p37_75622_c1 3300050507 Bacteria 4145
253 nmdc:mga09592_173498_c1 3300050508 Bacteria 1865
254 nmdc:mga0qj67_162685_c1 3300050509 Bacteria 1812
255 nmdc:mga0rr50_130831_c1 3300050513 Bacteria 2009
256 Ga0495612_0135702 3300053078 Bacteria 1065
257 Ga0495595_0091330 3300053084 Bacteria 1461
258 Ga0207690_10074604
259 JGI25406J46586_10011844
260 rootL2_10304183
261 Ga0065715_10090194
262 Ga0070658_10011561
263 Ga0070658_10056936
264 Ga0070658_10072592
265 Ga0070658_10127075
266 Ga0070658_10146136
267 Ga0070676_10115401
268 Ga0070676_10266789
269 Ga0070683_100000801
270 Ga0070683_100059501
271 Ga0070683_100119101
272 Ga0070683_100145603
273 Ga0070670_100184289
274 Ga0070680_100006480
275 Ga0070680_100024305
276 Ga0070680_100076109
277 Ga0070680_100324202
278 Ga0070682_100002165
279 Ga0070682_100009201
280 Ga0068868_100082993
281 Ga0070660_100050957
282 Ga0070660_100115303
283 Ga0070660_100158354
284 Ga0070687_100261245
285 Ga0070661_100038922
286 Ga0070668_100093502
287 Ga0070668_100348555
288 Ga0070669_100130693
289 Ga0070675_100067099
290 Ga0070675_100308563
291 Ga0070674_100092053
292 Ga0070673_100037010
293 Ga0070688_100074709
294 Ga0070659_100015626
295 Ga0070667_100163699
296 Ga0070714_100010840
297 Ga0070713_100501940
298 Ga0070710_10330207
299 Ga0070708_100018569
300 Ga0070708_100054312
301 Ga0070681_10002337
302 Ga0070681_10059888
303 Ga0070681_10107129
304 Ga0070707_100016543
305 Ga0070707_100281742
306 Ga0070698_100106939
307 Ga0070699_100081609
308 Ga0070699_100081741
309 Ga0070679_100000774
310 Ga0070679_100028092
311 Ga0070679_100094423
312 Ga0070679_100259507
313 Ga0070679_100364297
314 Ga0070684_100115002
315 Ga0070684_100124734
316 Ga0070697_100012013
317 Ga0068853_100102242
318 Ga0068853_100444297
319 Ga0070695_100020329
320 Ga0070696_100069244
321 Ga0070693_100007071
322 Ga0070704_100135542
323 Ga0068855_100118181
324 Ga0068855_100151129
325 Ga0070664_100078573
326 Ga0070664_100140661
327 Ga0068856_100011967
328 Ga0068856_100948074
329 Ga0068852_100044473
330 Ga0068852_100077703
331 Ga0068852_100316274
332 Ga0068859_100194699
333 Ga0068859_100296134
334 Ga0068864_100220665
335 Ga0068866_10110192
336 Ga0068866_10200931
337 Ga0068862_100114525
338 Ga0081539_10001894
339 Ga0075430_100025731
340 Ga0075431_100061938
341 Ga0075429_100164016
342 Ga0075436_100131400
343 Ga0097620_100194705
344 Ga0097620_100296127
345 Ga0099794_10290947
346 Ga0105240_10039646
347 Ga0105245_10076614
348 Ga0105245_10095900
349 Ga0105245_10120437
350 Ga0105245_10145797
351 Ga0114129_10421987
352 Ga0105241_10000058
353 Ga0105248_10038310
354 Ga0105248_10354907
355 Ga0105237_10166197
356 Ga0105238_10201163
357 Ga0105239_10160315
358 Ga0157373_10312342
359 Ga0157370_10196553
360 Ga0157370_10469706
361 Ga0157369_10006479
362 Ga0157369_10036916
363 Ga0157369_10113484
364 Ga0157374_10016868
365 Ga0157374_10095568
366 Ga0157378_10110482
367 Ga0163162_10518249
368 Ga0157372_10003332
369 Ga0157372_10014075
370 Ga0157372_10017306
371 Ga0157372_10146400
372 Ga0157372_10233809
373 Ga0157375_10022983
374 Ga0157375_10073111
375 Ga0206353_11011011
376 Ga0213876_10007570
377 Ga0207692_10269219
378 Ga0207645_10052483
379 Ga0207643_10057387
380 Ga0207705_10011774
381 Ga0207705_10053608
382 Ga0207705_10083601
383 Ga0207684_10085852
384 Ga0207654_10000213
385 Ga0207707_10000887
386 Ga0207707_10083366
387 Ga0207707_10125599
388 Ga0207693_10619007
389 Ga0207663_10360094
390 Ga0207660_10016882
391 Ga0207660_10053806
392 Ga0207660_10356719
393 Ga0207657_10000850
394 Ga0207657_10097579
395 Ga0207649_10069901
396 Ga0207652_10016447
397 Ga0207652_10063288
398 Ga0207652_10071957
399 Ga0207652_10115892
400 Ga0207652_10143726
401 Ga0207646_10001934
402 Ga0207646_10024282
403 Ga0207681_10044061
404 Ga0207681_10075241
405 Ga0207659_10061150
406 Ga0207659_10448590
407 Ga0207687_10100906
408 Ga0207687_10107960
409 Ga0207664_10019882
410 Ga0207644_10350157
411 Ga0207690_10146386
412 Ga0207686_10087307
413 Ga0207711_10251278
414 Ga0207711_10350508
415 Ga0207689_10074696
416 Ga0207661_10001536
417 Ga0207661_10046212
418 Ga0207661_10106911
419 Ga0207661_10120254
420 Ga0207679_10139650
421 Ga0207679_10200836
422 Ga0207667_10006901
423 Ga0207667_10122489
424 Ga0207651_10263907
425 Ga0207668_10536717
426 Ga0207640_10144655
427 Ga0207677_10169369
428 Ga0207639_10126701
429 Ga0207639_10224475
430 Ga0207708_10021354
431 Ga0207702_10009064
432 Ga0207702_10480403
433 Ga0207648_10092649
434 Ga0207648_10141238
435 Ga0207675_100143885
436 Ga0207683_10483022
437 Ga0207698_10050254
438 Ga0207698_10120958
439 Ga0207698_10306492
440 Ga0207698_10568997
441 Ga0209996_1002296
442 Ga0268265_10319541
443 Ga0268264_10244880
444 Ga0307408_100016300
445 Ga0307405_10003796
446 Ga0307413_10003106
447 Ga0307410_10013534
448 Ga0307406_10002708
449 Ga0307407_10024765
450 Ga0307412_10000852
451 Ga0307409_100016409
452 Ga0307416_100222885
453 Ga0307416_100269390
454 Ga0307416_100360521
455 Ga0307414_10079707
456 Ga0307411_10000278
457 Ga0307415_100000583
458 Ga0373934_0018732
459 Ga0373923_0026011
460 Ga0373957_0036415
461 Ga0373924_0171930
462 Ga0373935_0010719
463 Ga0373935_0363767
464 Ga0373927_0306532
465 Ga0373933_0241621
466 Ga0373947_0082658
467 Ga0373925_0358310
468 Ga0395899_0035987
469 Ga0395900_0027687
470 Ga0395905_0028888
471 Ga0395901_0005561
472 Ga0436365_0448875
473 Ga0436365_0677394
474 Ga0436365_1559730
475 Ga0466967_0023405
476 Ga0495592_0066704
477 Ga0495629_0153140
478 Ga0495651_0047209
479 Ga0495653_0005618
480 Ga0495580_0080270
481 Ga0495580_0143993
482 Ga0495639_0086214
483 Ga0495594_0038283
484 Ga0495594_0070628
485 Ga0495628_0009694
486 Ga0495630_0558828
487 Ga0495666_0049902
488 Ga0495652_0015494
489 Ga0495665_0090110
490 Ga0495586_0114369
491 Ga0495587_0020119
492 Ga0495667_0164247
493 Ga0495635_0079777
494 Ga0495588_0139601
495 Ga0495599_0009776
496 Ga0495623_0249231
497 Ga0495674_0037079
498 Ga0495672_0002563
499 Ga0495675_0009382
500 Ga0495684_0005406
501 Ga0495684_0349720
502 Ga0495602_0131675
503 Ga0496105_0070719
504 Ga0496112_0285530
505 Ga0501032_0058122
506 Ga0501070_0085825
507 Ga0501035_0131761
508 Ga0501044_0484310
509 nmdc:mga05p37_75622_c1
510 nmdc:mga09592_173498_c1
511 nmdc:mga0qj67_162685_c1
512 nmdc:mga0rr50_130831_c1
513 Ga0495612_0135702
514 Ga0495595_0091330

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00588

SpoU_methylase

SpoU rRNA Methylase family

134

273

0.96

PF08032

SpoU_sub_bind

RNA 2'-O ribose methyltransferase substrate binding

47

124

0.93

PF22435

MRM3-like_sub_bind

MRM3-like substrate binding domain

28

116

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gz0-assembly4.cif.gz_E 23s ribosomal rna g2251 2'o-methyltransferase rlmb 0.9152 108 250
2ha8-assembly1.cif.gz_B methyltransferase domain of human tar (hiv-1) rna binding protein 1 0.8832 110 251
1x7p-assembly1.cif.gz_A crystal structure of the spou methyltransferase avirb from streptomyces viridochromogenes in complex with the cofactor adomet 0.8748 4 251
7qiu-assembly1.cif.gz_B ysga 23s rna methyltransferase from bacillus subtilis 0.874 1 252
5l0z-assembly1.cif.gz_B crystal structure of adomet bound rrna methyltransferase from sinorhizobium meliloti 0.8726 3 250
ID Description Score Start End Superfamily
af_Q9VW14_228_404_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9325 110 250 3.40.1280.10
af_P94978_97_258_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9309 98 251 3.40.1280.10
af_C6T8X9_163_323_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9308 108 251 3.40.1280.10
af_Q566V3_221_422_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9301 107 249 3.40.1280.10
af_A0A1D6F0W4_35_149_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9232 171 250 3.40.1280.10
ID Description Score Start End GO Terms
AF-A0A838T507-F1-model_v4 RNA methyltransferase 0.9742 1 151 GO:0003723
GO:0005737
GO:0006396
GO:0008173
GO:0032259
AF-A0A838T507-F1-model_v4 RNA methyltransferase 0.9617 1 151 GO:0003723
GO:0005737
GO:0006396
GO:0008173
GO:0032259
AF-A0A841H202-F1-model_v4 TrmH family RNA methyltransferase 0.96 4 252 GO:0003723
GO:0005737
GO:0006396
GO:0008173
GO:0032259
AF-A0A841H202-F1-model_v4 TrmH family RNA methyltransferase 0.9452 4 252 GO:0003723
GO:0005737
GO:0006396
GO:0008173
GO:0032259
AF-A0A1F9D5I0-F1-model_v4 23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB 0.9391 111 251 GO:0003723
GO:0005829
GO:0006396
GO:0008173
GO:0032259

Map