F367241
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 257 | 176 | 514 | 313 |
Family's Representative Sequence
| Representative Sequence | 3300009036|Ga0105244_10036701|Ga0105244_100367012 |
| Length | 353 |
| Sequence | MERVNSAEPSQPRTVELLPVRVQGTGNEEEPIMAVQHTDKVQKIDLRGRDFIEFTDYTAEEIRYLLDLAIEIKGKQKSGVPFQPLKGKTIGLIFEKSSTRTRVSFEVGMFQLGGHALFLSKNDIQLGRGETTHDTAKVLSRYLDGIMIRTFGHHNVIELAEHADVPVINGLSDAAHPCQVLADFQTVLEHKGKLAGLKMAYVGDGNNMAHSLMLGAAKMGMHVAVATPEGYEPDSTVVEQARAIAQESGSEVVVTYSAQEAVKDADIVYTDVWASMGFEEEQKIREQAFAAYQVDEELMKGAKPDYMFLHCLPAHRGEEVSAGVIDGPNSLIFDQAENRLHAQKALMAALMSE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 2 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 3 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 4 | 3300003751 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 | Metagenome | Endosphere |
| 5 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 6 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 8 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 14 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 15 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 16 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 17 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 19 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 20 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 21 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 22 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 23 | 3300025224 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 24 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 25 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 26 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 27 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 28 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 31 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 32 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 33 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 34 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 35 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 36 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 37 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 38 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 39 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 40 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 41 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 42 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 43 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 44 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 45 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 46 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 47 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 48 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 49 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 50 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 51 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 52 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 53 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 54 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 55 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 56 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 57 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 58 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 59 | 3300038727 | Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 | Metagenome | Unclassified |
| 60 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 61 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 62 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 63 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 64 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 65 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 66 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 67 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 68 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 69 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 70 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 71 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 72 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 73 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 74 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 78 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 79 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 80 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 81 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 82 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 83 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 84 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 85 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 86 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 87 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 88 | 3300049129 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 89 | 3300049531 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 90 | 3300049532 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 91 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 92 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 93 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 94 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 95 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 96 | 3300049649 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought | Metagenome | Rhizosphere |
| 97 | 3300049661 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control | Metagenome | Rhizosphere |
| 98 | 3300049688 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought | Metagenome | Rhizosphere |
| 99 | 3300049690 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought | Metagenome | Rhizosphere |
| 100 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 101 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 102 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 103 | 3300059424 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 104 | 3300059426 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 105 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 106 | 2548877040 | Paenibacillus sonchi X19-5 | Isolate | Rhizosphere |
| 107 | 2571042143 | Paenibacillus graminis RSA19 | Isolate | Unclassified |
| 108 | 2571042588 | Paenibacillus zanthoxyli JH29 | Isolate | Unclassified |
| 109 | 2576861424 | Paenibacillus sabinae T27 | Isolate | Rhizosphere |
| 110 | 2579778775 | Paenibacillus durus P3L-5 | Isolate | Unclassified |
| 111 | 2600255286 | Paenibacillus sp. NFR01 | Isolate | Rhizoplane |
| 112 | 2619619294 | Paenibacillus durus ATCC 35681 | Isolate | Unclassified |
| 113 | 2630968484 | Bacillus methylotrophicus KACC 13105 | Isolate | Rhizosphere |
| 114 | 2643221543 | Paenibacillus sp. Root52 | Isolate | Unclassified |
| 115 | 2643221676 | Paenibacillus sp. Root444D2 | Isolate | Unclassified |
| 116 | 2643221735 | Bacillus sp. Root920 | Isolate | Unclassified |
| 117 | 2648501850 | Bacillus amyloliquefaciens RHNK22 | Isolate | Rhizosphere |
| 118 | 2695420354 | Bacillus sp. Co1-6 | Isolate | Unclassified |
| 119 | 2716884898 | Bacillus methylotrophicus FKM10 | Isolate | Rhizosphere |
| 120 | 2728368933 | Paenibacillus jilunlii DSM 23019 | Isolate | Rhizosphere |
| 121 | 2738541295 | Bacillus sp. OK085 | Isolate | Unclassified |
| 122 | 2738541299 | Paenisporosarcina sp. OV554 | Isolate | Unclassified |
| 123 | 2738543010 | Bacillus sp. YR335 | Isolate | Unclassified |
| 124 | 2816332186 | Peribacillus frigoritolerans 3612 | Isolate | Unclassified |
| 125 | 2821111986 | Paenibacillus illinoisensis 582 | Isolate | Unclassified |
| 126 | 2842682962 | Bacillus sp. R-72492 | Isolate | Unclassified |
| 127 | 2849139964 | Bacillus sp. R-71875 | Isolate | Unclassified |
| 128 | 2860837431 | Bacillus sp. WR11 | Isolate | Unclassified |
| 129 | 2864733723 | Paenibacillus sp. JGP012 | Isolate | Rhizosphere |
| 130 | 2877768649 | Bacillus amyloliquefaciens Y14 | Isolate | Rhizosphere |
| 131 | 2880169592 | Bacillus velezensis T20E-257 | Isolate | Unclassified |
| 132 | 2881636855 | Paenibacillus sp. 7197 | Isolate | Rhizosphere |
| 133 | 2885526491 | Paenibacillus sp. LK1 | Isolate | Rhizosphere |
| 134 | 2888578766 | Paenibacillus lycopersici 12200R-189 | Isolate | Rhizosphere |
| 135 | 2889042446 | Paenibacillus sp. 37 | Isolate | Rhizosphere |
| 136 | 2897109615 | Bacillus amyloliquefaciens YP6 | Isolate | Unclassified |
| 137 | 2904162308 | Paenibacillus sp. AD87 | Isolate | Unclassified |
| 138 | 2904490793 | Paenibacillus sp. 1295 | Isolate | Rhizosphere |
| 139 | 2907202186 | Paenibacillus sp. HJL G12 | Isolate | Unclassified |
| 140 | 2908665501 | Bacillus pumilus 1391 | Isolate | Rhizosphere |
| 141 | 2919093281 | Bacillus safensis 1383 | Isolate | Rhizosphere |
| 142 | 2919160200 | Paenibacillus sp. 2003 | Isolate | Unclassified |
| 143 | 2919414237 | Neobacillus niacini 3240 | Isolate | Rhizosphere |
| 144 | 2929206907 | Paenibacillus sp. R-74146 Hybrid assembly | Isolate | Unclassified |
| 145 | 2931384279 | Paenibacillus sp. DR312 | Isolate | Rhizosphere |
| 146 | 2936361878 | Neobacillus endophyticus BRMEA1 | Isolate | Unclassified |
| 147 | 2938649242 | Paenibacillus helianthi P26E | Isolate | Rhizosphere |
| 148 | 2939679117 | Paenibacillus sp. 4624 | Isolate | Rhizosphere |
| 149 | 2939702853 | Paenibacillus sp. PvR008 | Isolate | Rhizosphere |
| 150 | 2945991243 | Paenibacillus sp. B21a W2I17 | Isolate | Rhizosphere |
| 151 | 2954773129 | Bacillus sp. TBS-096 | Isolate | Rhizosphere |
| 152 | 2962290636 | Bacillus subtilis TLO3 | Isolate | Rhizosphere |
| 153 | 2968558590 | Paenibacillus sp. P3E | Isolate | Rhizosphere |
| 154 | 2969136845 | Bacillus subtilis TLO3 | Isolate | Rhizosphere |
| 155 | 2969770375 | Bacillus subtilis GM5 | Isolate | Rhizosphere |
| 156 | 2971403814 | Paenibacillus tritici LMG 29502 | Isolate | Unclassified |
| 157 | 2971511577 | Paenibacillus apii 7124 | Isolate | Rhizosphere |
| 158 | 2971893375 | Bacillus sp. HNA3 | Isolate | Rhizosphere |
| 159 | 2980176882 | Paenibacillus apii 7028 | Isolate | Rhizosphere |
| 160 | 2980182181 | Paenibacillus cymbidii R196 | Isolate | Unclassified |
| 161 | 2980492589 | Bacillus subtilis GQJK2 | Isolate | Rhizosphere |
| 162 | 2984527788 | Paenibacillus sp. SORGH_AS306 | Isolate | Aerial Root |
| 163 | 2984532647 | Paenibacillus sp. SORGH_AS338 | Isolate | Aerial Root |
| 164 | 2988225383 | Paenibacillus sp. P46E | Isolate | Rhizosphere |
| 165 | 2996632988 | Paenibacillus sp. P32E | Isolate | Rhizosphere |
| 166 | 3001272096 | Lederbergia citrisecunda FJAT-49732 | Isolate | Rhizosphere |
| 167 | 3001892409 | Neobacillus rhizophilus FJAT-49825 | Isolate | Rhizosphere |
| 168 | 3006988479 | Bacillus sp. FJAT-49711 | Isolate | Rhizosphere |
| 169 | 8002317523 | Cohnella sp. GbtcB17 | Isolate | Unclassified |
| 170 | 8022630665 | Bacillus sp. PW192 | Isolate | Rhizosphere |
| 171 | 8022653035 | Bacillus sp. Rc4 | Isolate | Unclassified |
| 172 | 8046991243 | Cohnella rhizosphaerae DSM 28161 | Isolate | Rhizosphere |
| 173 | 8051952484 | Bacillus amyloliquefaciens K2 | Isolate | Rhizosphere |
| 174 | 8054465665 | Paenibacillus sonchi IIRRBNF1 | Isolate | Rhizosphere |
| 175 | 8055632911 | Paenibacillus radicibacter N1-5-1-14 | Isolate | Unclassified |
| 176 | 8057977335 | Paenibacillus oenotherae DT7-4 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 70.43 |
| Metatranscriptomes | 1.95 |
| Isolates | 27.63 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.78 |
| Bulb | 0 |
| Endosphere | 3.11 |
| Nodule | 0 |
| Rhizoplane | 1.56 |
| Rhizosphere | 66.93 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.56 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0105244_10036701 | 3300009036 | Bacteria | 2566 |
| 2 | JGI25162J39368_1005439 | 3300002737 | Bacteria | 2499 |
| 3 | Ga0006562J51391_1002675 | 3300003578 | Bacteria | 12360 |
| 4 | Ga0055538_1000384 | 3300003751 | Bacteria | 18126 |
| 5 | Ga0070694_100000026 | 3300005444 | Bacteria | 68351 |
| 6 | Ga0070708_100001346 | 3300005445 | Bacteria | 18798 |
| 7 | Ga0070708_100005485 | 3300005445 | Bacteria | 10057 |
| 8 | Ga0070708_100213125 | 3300005445 | Bacteria | 1810 |
| 9 | Ga0070706_100000104 | 3300005467 | Bacteria | 103774 |
| 10 | Ga0070707_100318783 | 3300005468 | Bacteria | 1511 |
| 11 | Ga0070698_100248327 | 3300005471 | Bacteria | 1712 |
| 12 | Ga0070699_100092823 | 3300005518 | Bacteria | 2641 |
| 13 | Ga0070699_100186618 | 3300005518 | Bacteria | 1841 |
| 14 | Ga0070697_100191283 | 3300005536 | Bacteria | 1737 |
| 15 | Ga0070664_100206345 | 3300005564 | Bacteria | 1755 |
| 16 | Ga0068858_100387696 | 3300005842 | Bacteria | 1341 |
| 17 | Ga0081538_10011776 | 3300005981 | Bacteria | 7058 |
| 18 | Ga0081538_10028380 | 3300005981 | Bacteria | 3850 |
| 19 | Ga0081538_10045622 | 3300005981 | Bacteria | 2714 |
| 20 | Ga0081539_10000707 | 3300005985 | Bacteria | 66881 |
| 21 | Ga0081539_10043944 | 3300005985 | Bacteria | 2584 |
| 22 | Ga0099794_10011872 | 3300007265 | Bacteria | 3744 |
| 23 | Ga0099794_10020512 | 3300007265 | Bacteria | 2992 |
| 24 | Ga0099794_10099553 | 3300007265 | Bacteria | 1450 |
| 25 | Ga0105251_10032449 | 3300009011 | Bacteria | 2602 |
| 26 | Ga0105244_10045700 | 3300009036 | Bacteria | 2252 |
| 27 | Ga0105244_10100187 | 3300009036 | Bacteria | 1418 |
| 28 | Ga0105244_10103083 | 3300009036 | Bacteria | 1394 |
| 29 | Ga0111539_10203032 | 3300009094 | Bacteria | 2311 |
| 30 | Ga0114129_10027702 | 3300009147 | Bacteria | 8022 |
| 31 | Ga0114129_10066480 | 3300009147 | Bacteria | 5030 |
| 32 | Ga0105246_10001176 | 3300011119 | Bacteria | 15193 |
| 33 | Ga0157371_10080917 | 3300013102 | Bacteria | 2300 |
| 34 | Ga0163162_10275118 | 3300013306 | Bacteria | 1816 |
| 35 | Ga0209784_100075 | 3300025224 | Bacteria | 139902 |
| 36 | Ga0209566_100230 | 3300025225 | Bacteria | 54216 |
| 37 | Ga0209566_106565 | 3300025225 | Bacteria | 1367 |
| 38 | Ga0209437_100453 | 3300025233 | Bacteria | 33692 |
| 39 | Ga0209675_1015208 | 3300025291 | Bacteria | 2298 |
| 40 | Ga0209025_1000001 | 3300025294 | Bacteria | 1888151 |
| 41 | Ga0207684_10000044 | 3300025910 | Bacteria | 258218 |
| 42 | Ga0209588_1018481 | 3300027671 | Bacteria | 2171 |
| 43 | Ga0265326_10009247 | 3300028558 | Unclassified | 2945 |
| 44 | Ga0265318_10060980 | 3300028577 | Bacteria | 1405 |
| 45 | Ga0265332_10005895 | 3300031238 | Bacteria | 5605 |
| 46 | Ga0265316_10006463 | 3300031344 | Bacteria | 11188 |
| 47 | Ga0307408_100013757 | 3300031548 | Bacteria | 5372 |
| 48 | Ga0265313_10003982 | 3300031595 | Bacteria | 11601 |
| 49 | Ga0316575_10000346 | 3300031665 | Bacteria | 13099 |
| 50 | Ga0316575_10027585 | 3300031665 | Bacteria | 2209 |
| 51 | Ga0316579_10008099 | 3300031691 | Bacteria | 4368 |
| 52 | Ga0316579_10059360 | 3300031691 | Bacteria | 1798 |
| 53 | Ga0265342_10000009 | 3300031712 | Bacteria | 220210 |
| 54 | Ga0265342_10087414 | 3300031712 | Unclassified | 1791 |
| 55 | Ga0316576_10007548 | 3300031727 | Bacteria | 6860 |
| 56 | Ga0316576_10009415 | 3300031727 | Bacteria | 6301 |
| 57 | Ga0316576_10018173 | 3300031727 | Bacteria | 4793 |
| 58 | Ga0316576_10018593 | 3300031727 | Bacteria | 4747 |
| 59 | Ga0316576_10030809 | 3300031727 | Bacteria | 3801 |
| 60 | Ga0316576_10077968 | 3300031727 | Bacteria | 2454 |
| 61 | Ga0316576_10088381 | 3300031727 | Bacteria | 2307 |
| 62 | Ga0316576_10107699 | 3300031727 | Archaea | 2088 |
| 63 | Ga0316576_10225782 | 3300031727 | Bacteria | 1408 |
| 64 | Ga0316578_10017576 | 3300031728 | Bacteria | 3895 |
| 65 | Ga0316578_10072255 | 3300031728 | Bacteria | 2043 |
| 66 | Ga0316577_10017446 | 3300031733 | Bacteria | 3963 |
| 67 | Ga0316577_10023393 | 3300031733 | Bacteria | 3431 |
| 68 | Ga0316577_10052188 | 3300031733 | Bacteria | 2281 |
| 69 | Ga0316577_10128227 | 3300031733 | Bacteria | 1427 |
| 70 | Ga0307413_10075437 | 3300031824 | Bacteria | 2140 |
| 71 | Ga0307410_10020849 | 3300031852 | Bacteria | 4019 |
| 72 | Ga0307406_10051460 | 3300031901 | Bacteria | 2615 |
| 73 | Ga0307407_10042992 | 3300031903 | Bacteria | 2537 |
| 74 | Ga0307407_10103077 | 3300031903 | Bacteria | 1775 |
| 75 | Ga0307407_10138344 | 3300031903 | Bacteria | 1568 |
| 76 | Ga0307412_10034230 | 3300031911 | Bacteria | 3237 |
| 77 | Ga0307409_100126286 | 3300031995 | Bacteria | 2176 |
| 78 | Ga0307416_100054523 | 3300032002 | Bacteria | 3214 |
| 79 | Ga0307416_100080327 | 3300032002 | Bacteria | 2752 |
| 80 | Ga0307414_10160932 | 3300032004 | Bacteria | 1783 |
| 81 | Ga0307414_10477141 | 3300032004 | Bacteria | 1099 |
| 82 | Ga0307411_10008952 | 3300032005 | Bacteria | 5226 |
| 83 | Ga0307415_100033889 | 3300032126 | Bacteria | 3318 |
| 84 | Ga0307415_100291272 | 3300032126 | Bacteria | 1348 |
| 85 | Ga0316583_10003206 | 3300032133 | Bacteria | 5753 |
| 86 | Ga0316583_10022353 | 3300032133 | Bacteria | 2264 |
| 87 | Ga0316583_10023556 | 3300032133 | Bacteria | 2199 |
| 88 | Ga0316583_10047377 | 3300032133 | Bacteria | 1516 |
| 89 | Ga0316574_0001100 | 3300035398 | Bacteria | 12378 |
| 90 | Ga0316574_0025218 | 3300035398 | Bacteria | 3567 |
| 91 | Ga0316574_0036985 | 3300035398 | Bacteria | 2991 |
| 92 | Ga0316574_0085330 | 3300035398 | Bacteria | 2009 |
| 93 | Ga0316582_0010019 | 3300036647 | Bacteria | 5171 |
| 94 | Ga0316582_0019434 | 3300036647 | Bacteria | 3976 |
| 95 | Ga0316582_0060778 | 3300036647 | Bacteria | 2423 |
| 96 | Ga0316582_0104517 | 3300036647 | Bacteria | 1879 |
| 97 | Ga0316582_0236331 | 3300036647 | Bacteria | 1251 |
| 98 | Ga0316582_0373896 | 3300036647 | Bacteria | 981 |
| 99 | Ga0316582_0400021 | 3300036647 | Bacteria | 946 |
| 100 | Ga0316584_0018874 | 3300036712 | Bacteria | 4979 |
| 101 | Ga0316584_0075098 | 3300036712 | Bacteria | 2534 |
| 102 | Ga0316584_0088837 | 3300036712 | Bacteria | 2314 |
| 103 | Ga0316584_0180168 | 3300036712 | Bacteria | 1564 |
| 104 | Ga0316584_0266689 | 3300036712 | Bacteria | 1247 |
| 105 | Ga0316581_0005060 | 3300037588 | Bacteria | 3407 |
| 106 | Ga0400484_21093 | 3300038725 | Bacteria | 30201 |
| 107 | Ga0400490_30992 | 3300038726 | Bacteria | 11068 |
| 108 | Ga0400490_31716 | 3300038726 | Bacteria | 1608 |
| 109 | Ga0400490_60561 | 3300038726 | Bacteria | 10314 |
| 110 | Ga0400491_01477 | 3300038727 | Bacteria | 11544 |
| 111 | Ga0400485_05769 | 3300038735 | Bacteria | 13446 |
| 112 | Ga0400485_13295 | 3300038735 | Bacteria | 2343 |
| 113 | Ga0400485_21360 | 3300038735 | Bacteria | 2349 |
| 114 | Ga0400486_02353 | 3300038742 | Bacteria | 2835 |
| 115 | Ga0400486_02364 | 3300038742 | Bacteria | 5955 |
| 116 | Ga0400486_03860 | 3300038742 | Bacteria | 65081 |
| 117 | Ga0400486_10548 | 3300038742 | Bacteria | 2281 |
| 118 | Ga0400486_19528 | 3300038742 | Bacteria | 1218 |
| 119 | Ga0400483_083197 | 3300039062 | Bacteria | 151799 |
| 120 | Ga0400483_146965 | 3300039062 | Bacteria | 18835 |
| 121 | Ga0400483_169151 | 3300039062 | Bacteria | 15152 |
| 122 | Ga0400483_184129 | 3300039062 | Bacteria | 3981 |
| 123 | Ga0400483_278855 | 3300039062 | Bacteria | 1102 |
| 124 | Ga0400489_19285 | 3300039093 | Bacteria | 25488 |
| 125 | Ga0400489_35967 | 3300039093 | Bacteria | 4316 |
| 126 | Ga0400489_42824 | 3300039093 | Bacteria | 20644 |
| 127 | Ga0400489_62576 | 3300039093 | Bacteria | 4294 |
| 128 | Ga0400487_37382 | 3300039110 | Bacteria | 1644 |
| 129 | Ga0400487_50061 | 3300039110 | Unclassified | 4792 |
| 130 | Ga0400487_54206 | 3300039110 | Bacteria | 2355 |
| 131 | Ga0436365_0721206 | 3300039437 | Bacteria | 8915 |
| 132 | Ga0439439_0000238 | 3300041406 | Bacteria | 8611 |
| 133 | Ga0439433_0002441 | 3300041999 | Bacteria | 3942 |
| 134 | Ga0439449_0000214 | 3300042007 | Bacteria | 20492 |
| 135 | Ga0439457_024337 | 3300042014 | Bacteria | 1340 |
| 136 | Ga0439462_0000480 | 3300042015 | Bacteria | 7856 |
| 137 | Ga0451577_0027619 | 3300042876 | Bacteria | 5138 |
| 138 | Ga0451577_0077731 | 3300042876 | Bacteria | 2959 |
| 139 | Ga0451577_0101223 | 3300042876 | Bacteria | 2574 |
| 140 | Ga0453684_0072695 | 3300044712 | Bacteria | 4340 |
| 141 | Ga0453684_0119621 | 3300044712 | Bacteria | 3183 |
| 142 | Ga0451576_0120060 | 3300045051 | Bacteria | 2737 |
| 143 | Ga0495627_053838 | 3300046453 | Bacteria | 1204 |
| 144 | Ga0495588_0186126 | 3300046674 | Bacteria | 1097 |
| 145 | Ga0495660_0200474 | 3300046810 | Bacteria | 953 |
| 146 | Ga0496101_0060287 | 3300048904 | Bacteria | 2753 |
| 147 | Ga0496110_0177080 | 3300048913 | Bacteria | 1936 |
| 148 | Ga0496112_0209819 | 3300048915 | Bacteria | 1905 |
| 149 | Ga0496116_0005053 | 3300048919 | Bacteria | 12411 |
| 150 | Ga0496116_0007212 | 3300048919 | Bacteria | 9923 |
| 151 | Ga0496116_0037501 | 3300048919 | Bacteria | 3379 |
| 152 | Ga0496116_0042902 | 3300048919 | Bacteria | 3087 |
| 153 | Ga0496119_0000316 | 3300048922 | Bacteria | 67705 |
| 154 | Ga0496120_0002629 | 3300048923 | Bacteria | 17792 |
| 155 | Ga0496122_0005848 | 3300048925 | Bacteria | 14445 |
| 156 | Ga0496122_0013623 | 3300048925 | Bacteria | 7938 |
| 157 | Ga0496123_0036489 | 3300048926 | Unclassified | 3486 |
| 158 | Ga0496123_0055685 | 3300048926 | Bacteria | 2592 |
| 159 | Ga0496124_0000976 | 3300048927 | Bacteria | 45516 |
| 160 | Ga0496124_0052906 | 3300048927 | Bacteria | 3447 |
| 161 | Ga0496125_0008884 | 3300048928 | Bacteria | 10433 |
| 162 | Ga0496126_0002425 | 3300048929 | Bacteria | 25239 |
| 163 | Ga0496126_0003416 | 3300048929 | Bacteria | 20076 |
| 164 | Ga0501309_003696 | 3300049129 | Bacteria | 1746 |
| 165 | Ga0501315_000220 | 3300049531 | Bacteria | 3515 |
| 166 | Ga0501316_001090 | 3300049532 | Bacteria | 2196 |
| 167 | Ga0501316_001504 | 3300049532 | Bacteria | 1996 |
| 168 | Ga0501031_0089147 | 3300049568 | Bacteria | 2011 |
| 169 | Ga0501041_0195096 | 3300049577 | Bacteria | 1269 |
| 170 | Ga0501041_0228639 | 3300049577 | Bacteria | 1168 |
| 171 | Ga0501041_0256202 | 3300049577 | Bacteria | 1100 |
| 172 | Ga0501068_0158454 | 3300049584 | Bacteria | 1426 |
| 173 | Ga0501072_0079254 | 3300049588 | Bacteria | 2601 |
| 174 | Ga0501075_0244783 | 3300049591 | Bacteria | 1367 |
| 175 | Ga0501198_009562 | 3300049649 | Bacteria | 1425 |
| 176 | Ga0501217_009591 | 3300049661 | Bacteria | 2108 |
| 177 | Ga0501259_014650 | 3300049688 | Bacteria | 1332 |
| 178 | Ga0501261_008550 | 3300049690 | Bacteria | 1324 |
| 179 | Ga0501080_0219054 | 3300049742 | Bacteria | 1742 |
| 180 | nmdc:mga05p37_26578_c1 | 3300050507 | Bacteria | 7038 |
| 181 | nmdc:mga05p37_735917_c1 | 3300050507 | Bacteria | 1090 |
| 182 | Ga0501084_0208775 | 3300054114 | Bacteria | 1648 |
| 183 | Ga0590075_025284 | 3300059424 | Bacteria | 1492 |
| 184 | Ga0590077_006320 | 3300059426 | Bacteria | 2430 |
| 185 | Ga0530510_0065645 | 3300061734 | Bacteria | 2630 |
| 186 | Ga0530510_0206694 | 3300061734 | Bacteria | 1459 |
| 187 | 2550904444 | 2548877040 | Bacteria | 7507281 |
| 188 | 2571530745 | 2571042143 | Bacteria | 6986194 |
| 189 | 2573040712 | 2571042588 | Bacteria | 5045676 |
| 190 | 2578339006 | 2576861424 | Bacteria | 5270569 |
| 191 | 2580934816 | 2579778775 | Bacteria | 5360914 |
| 192 | 2601640453 | 2600255286 | Bacteria | 5390125 |
| 193 | 2621277454 | 2619619294 | Bacteria | 5575484 |
| 194 | 2631984958 | 2630968484 | Bacteria | 3876276 |
| 195 | 2643736911 | 2643221543 | Bacteria | 6628015 |
| 196 | 2644423345 | 2643221676 | Bacteria | 8119172 |
| 197 | 2644739438 | 2643221735 | Bacteria | 3676263 |
| 198 | 2651530052 | 2648501850 | Bacteria | 3975476 |
| 199 | 2695626958 | 2695420354 | Bacteria | 3922431 |
| 200 | 2717917230 | 2716884898 | Bacteria | 3928789 |
| 201 | 2728531434 | 2728368933 | Bacteria | 7044283 |
| 202 | 2738817246 | 2738541295 | Bacteria | 5730091 |
| 203 | 2738838266 | 2738541299 | Bacteria | 4020721 |
| 204 | 2739232062 | 2738543010 | Bacteria | 5583595 |
| 205 | 2816863572 | 2816332186 | Bacteria | 5331395 |
| 206 | 2821118199 | 2821111986 | Bacteria | 6894338 |
| 207 | 2842685525 | 2842682962 | Bacteria | 5589973 |
| 208 | 2849140475 | 2849139964 | Bacteria | 5613304 |
| 209 | 2860838642 | 2860837431 | Bacteria | 4202080 |
| 210 | 2864736463 | 2864733723 | Bacteria | 6770668 |
| 211 | 2877769775 | 2877768649 | Bacteria | 3957164 |
| 212 | 2880170774 | 2880169592 | Bacteria | 3900066 |
| 213 | 2881638048 | 2881636855 | Bacteria | 5205297 |
| 214 | 2885529840 | 2885526491 | Bacteria | 7164189 |
| 215 | 2888584525 | 2888578766 | Bacteria | 6743310 |
| 216 | 2889048092 | 2889042446 | Bacteria | 7618936 |
| 217 | 2897110759 | 2897109615 | Bacteria | 4009619 |
| 218 | 2904168068 | 2904162308 | Bacteria | 7086713 |
| 219 | 2904494360 | 2904490793 | Bacteria | 7046938 |
| 220 | 2907207306 | 2907202186 | Bacteria | 6632024 |
| 221 | 2908666356 | 2908665501 | Bacteria | 3678115 |
| 222 | 2919093527 | 2919093281 | Bacteria | 3660974 |
| 223 | 2919165122 | 2919160200 | Bacteria | 6929020 |
| 224 | 2919415709 | 2919414237 | Bacteria | 5429133 |
| 225 | 2929207042 | 2929206907 | Bacteria | 5918291 |
| 226 | 2931385198 | 2931384279 | Bacteria | 7299545 |
| 227 | 2936364523 | 2936361878 | Bacteria | 5632809 |
| 228 | 2938652537 | 2938649242 | Bacteria | 7118381 |
| 229 | 2939680626 | 2939679117 | Bacteria | 6921672 |
| 230 | 2939706807 | 2939702853 | Bacteria | 5139229 |
| 231 | 2945996160 | 2945991243 | Bacteria | 7008369 |
| 232 | 2954775068 | 2954773129 | Bacteria | 3741715 |
| 233 | 2962292027 | 2962290636 | Bacteria | 4072939 |
| 234 | 2968559299 | 2968558590 | Bacteria | 6956864 |
| 235 | 2969138047 | 2969136845 | Bacteria | 3923176 |
| 236 | 2969771831 | 2969770375 | Bacteria | 4271280 |
| 237 | 2971410378 | 2971403814 | Bacteria | 7370929 |
| 238 | 2971514400 | 2971511577 | Bacteria | 5404012 |
| 239 | 2971894524 | 2971893375 | Bacteria | 3929648 |
| 240 | 2980180614 | 2980176882 | Bacteria | 5397533 |
| 241 | 2980190073 | 2980182181 | Bacteria | 9454109 |
| 242 | 2980493824 | 2980492589 | Bacteria | 4072961 |
| 243 | 2984531261 | 2984527788 | Bacteria | 5288478 |
| 244 | 2984537371 | 2984532647 | Bacteria | 5288506 |
| 245 | 2988227430 | 2988225383 | Bacteria | 7221625 |
| 246 | 2996637771 | 2996632988 | Bacteria | 6921523 |
| 247 | 3001273235 | 3001272096 | Bacteria | 4729684 |
| 248 | 3001895452 | 3001892409 | Bacteria | 6328293 |
| 249 | 3006989472 | 3006988479 | Bacteria | 4767936 |
| 250 | 8002324562 | 8002317523 | Bacteria | 8051857 |
| 251 | 8022633985 | 8022630665 | Bacteria | 3886130 |
| 252 | 8022655214 | 8022653035 | Bacteria | 4035078 |
| 253 | 8046997236 | 8046991243 | Bacteria | 8497463 |
| 254 | 8051953402 | 8051952484 | Bacteria | 3926774 |
| 255 | 8054471426 | 8054465665 | Bacteria | 7323556 |
| 256 | 8055633204 | 8055632911 | Bacteria | 5283357 |
| 257 | 8057981389 | 8057977335 | Bacteria | 5694872 |
| 258 | Ga0105244_10036701 | |||
| 259 | JGI25162J39368_1005439 | |||
| 260 | Ga0006562J51391_1002675 | |||
| 261 | Ga0055538_1000384 | |||
| 262 | Ga0070694_100000026 | |||
| 263 | Ga0070708_100001346 | |||
| 264 | Ga0070708_100005485 | |||
| 265 | Ga0070708_100213125 | |||
| 266 | Ga0070706_100000104 | |||
| 267 | Ga0070707_100318783 | |||
| 268 | Ga0070698_100248327 | |||
| 269 | Ga0070699_100092823 | |||
| 270 | Ga0070699_100186618 | |||
| 271 | Ga0070697_100191283 | |||
| 272 | Ga0070664_100206345 | |||
| 273 | Ga0068858_100387696 | |||
| 274 | Ga0081538_10011776 | |||
| 275 | Ga0081538_10028380 | |||
| 276 | Ga0081538_10045622 | |||
| 277 | Ga0081539_10000707 | |||
| 278 | Ga0081539_10043944 | |||
| 279 | Ga0099794_10011872 | |||
| 280 | Ga0099794_10020512 | |||
| 281 | Ga0099794_10099553 | |||
| 282 | Ga0105251_10032449 | |||
| 283 | Ga0105244_10045700 | |||
| 284 | Ga0105244_10100187 | |||
| 285 | Ga0105244_10103083 | |||
| 286 | Ga0111539_10203032 | |||
| 287 | Ga0114129_10027702 | |||
| 288 | Ga0114129_10066480 | |||
| 289 | Ga0105246_10001176 | |||
| 290 | Ga0157371_10080917 | |||
| 291 | Ga0163162_10275118 | |||
| 292 | Ga0209784_100075 | |||
| 293 | Ga0209566_100230 | |||
| 294 | Ga0209566_106565 | |||
| 295 | Ga0209437_100453 | |||
| 296 | Ga0209675_1015208 | |||
| 297 | Ga0209025_1000001 | |||
| 298 | Ga0207684_10000044 | |||
| 299 | Ga0209588_1018481 | |||
| 300 | Ga0265326_10009247 | |||
| 301 | Ga0265318_10060980 | |||
| 302 | Ga0265332_10005895 | |||
| 303 | Ga0265316_10006463 | |||
| 304 | Ga0307408_100013757 | |||
| 305 | Ga0265313_10003982 | |||
| 306 | Ga0316575_10000346 | |||
| 307 | Ga0316575_10027585 | |||
| 308 | Ga0316579_10008099 | |||
| 309 | Ga0316579_10059360 | |||
| 310 | Ga0265342_10000009 | |||
| 311 | Ga0265342_10087414 | |||
| 312 | Ga0316576_10007548 | |||
| 313 | Ga0316576_10009415 | |||
| 314 | Ga0316576_10018173 | |||
| 315 | Ga0316576_10018593 | |||
| 316 | Ga0316576_10030809 | |||
| 317 | Ga0316576_10077968 | |||
| 318 | Ga0316576_10088381 | |||
| 319 | Ga0316576_10107699 | |||
| 320 | Ga0316576_10225782 | |||
| 321 | Ga0316578_10017576 | |||
| 322 | Ga0316578_10072255 | |||
| 323 | Ga0316577_10017446 | |||
| 324 | Ga0316577_10023393 | |||
| 325 | Ga0316577_10052188 | |||
| 326 | Ga0316577_10128227 | |||
| 327 | Ga0307413_10075437 | |||
| 328 | Ga0307410_10020849 | |||
| 329 | Ga0307406_10051460 | |||
| 330 | Ga0307407_10042992 | |||
| 331 | Ga0307407_10103077 | |||
| 332 | Ga0307407_10138344 | |||
| 333 | Ga0307412_10034230 | |||
| 334 | Ga0307409_100126286 | |||
| 335 | Ga0307416_100054523 | |||
| 336 | Ga0307416_100080327 | |||
| 337 | Ga0307414_10160932 | |||
| 338 | Ga0307414_10477141 | |||
| 339 | Ga0307411_10008952 | |||
| 340 | Ga0307415_100033889 | |||
| 341 | Ga0307415_100291272 | |||
| 342 | Ga0316583_10003206 | |||
| 343 | Ga0316583_10022353 | |||
| 344 | Ga0316583_10023556 | |||
| 345 | Ga0316583_10047377 | |||
| 346 | Ga0316574_0001100 | |||
| 347 | Ga0316574_0025218 | |||
| 348 | Ga0316574_0036985 | |||
| 349 | Ga0316574_0085330 | |||
| 350 | Ga0316582_0010019 | |||
| 351 | Ga0316582_0019434 | |||
| 352 | Ga0316582_0060778 | |||
| 353 | Ga0316582_0104517 | |||
| 354 | Ga0316582_0236331 | |||
| 355 | Ga0316582_0373896 | |||
| 356 | Ga0316582_0400021 | |||
| 357 | Ga0316584_0018874 | |||
| 358 | Ga0316584_0075098 | |||
| 359 | Ga0316584_0088837 | |||
| 360 | Ga0316584_0180168 | |||
| 361 | Ga0316584_0266689 | |||
| 362 | Ga0316581_0005060 | |||
| 363 | Ga0400484_21093 | |||
| 364 | Ga0400490_30992 | |||
| 365 | Ga0400490_31716 | |||
| 366 | Ga0400490_60561 | |||
| 367 | Ga0400491_01477 | |||
| 368 | Ga0400485_05769 | |||
| 369 | Ga0400485_13295 | |||
| 370 | Ga0400485_21360 | |||
| 371 | Ga0400486_02353 | |||
| 372 | Ga0400486_02364 | |||
| 373 | Ga0400486_03860 | |||
| 374 | Ga0400486_10548 | |||
| 375 | Ga0400486_19528 | |||
| 376 | Ga0400483_083197 | |||
| 377 | Ga0400483_146965 | |||
| 378 | Ga0400483_169151 | |||
| 379 | Ga0400483_184129 | |||
| 380 | Ga0400483_278855 | |||
| 381 | Ga0400489_19285 | |||
| 382 | Ga0400489_35967 | |||
| 383 | Ga0400489_42824 | |||
| 384 | Ga0400489_62576 | |||
| 385 | Ga0400487_37382 | |||
| 386 | Ga0400487_50061 | |||
| 387 | Ga0400487_54206 | |||
| 388 | Ga0436365_0721206 | |||
| 389 | Ga0439439_0000238 | |||
| 390 | Ga0439433_0002441 | |||
| 391 | Ga0439449_0000214 | |||
| 392 | Ga0439457_024337 | |||
| 393 | Ga0439462_0000480 | |||
| 394 | Ga0451577_0027619 | |||
| 395 | Ga0451577_0077731 | |||
| 396 | Ga0451577_0101223 | |||
| 397 | Ga0453684_0072695 | |||
| 398 | Ga0453684_0119621 | |||
| 399 | Ga0451576_0120060 | |||
| 400 | Ga0495627_053838 | |||
| 401 | Ga0495588_0186126 | |||
| 402 | Ga0495660_0200474 | |||
| 403 | Ga0496101_0060287 | |||
| 404 | Ga0496110_0177080 | |||
| 405 | Ga0496112_0209819 | |||
| 406 | Ga0496116_0005053 | |||
| 407 | Ga0496116_0007212 | |||
| 408 | Ga0496116_0037501 | |||
| 409 | Ga0496116_0042902 | |||
| 410 | Ga0496119_0000316 | |||
| 411 | Ga0496120_0002629 | |||
| 412 | Ga0496122_0005848 | |||
| 413 | Ga0496122_0013623 | |||
| 414 | Ga0496123_0036489 | |||
| 415 | Ga0496123_0055685 | |||
| 416 | Ga0496124_0000976 | |||
| 417 | Ga0496124_0052906 | |||
| 418 | Ga0496125_0008884 | |||
| 419 | Ga0496126_0002425 | |||
| 420 | Ga0496126_0003416 | |||
| 421 | Ga0501309_003696 | |||
| 422 | Ga0501315_000220 | |||
| 423 | Ga0501316_001090 | |||
| 424 | Ga0501316_001504 | |||
| 425 | Ga0501031_0089147 | |||
| 426 | Ga0501041_0195096 | |||
| 427 | Ga0501041_0228639 | |||
| 428 | Ga0501041_0256202 | |||
| 429 | Ga0501068_0158454 | |||
| 430 | Ga0501072_0079254 | |||
| 431 | Ga0501075_0244783 | |||
| 432 | Ga0501198_009562 | |||
| 433 | Ga0501217_009591 | |||
| 434 | Ga0501259_014650 | |||
| 435 | Ga0501261_008550 | |||
| 436 | Ga0501080_0219054 | |||
| 437 | nmdc:mga05p37_26578_c1 | |||
| 438 | nmdc:mga05p37_735917_c1 | |||
| 439 | Ga0501084_0208775 | |||
| 440 | Ga0590075_025284 | |||
| 441 | Ga0590077_006320 | |||
| 442 | Ga0530510_0065645 | |||
| 443 | Ga0530510_0206694 | |||
| 444 | 2550904444 | |||
| 445 | 2571530745 | |||
| 446 | 2573040712 | |||
| 447 | 2578339006 | |||
| 448 | 2580934816 | |||
| 449 | 2601640453 | |||
| 450 | 2621277454 | |||
| 451 | 2631984958 | |||
| 452 | 2643736911 | |||
| 453 | 2644423345 | |||
| 454 | 2644739438 | |||
| 455 | 2651530052 | |||
| 456 | 2695626958 | |||
| 457 | 2717917230 | |||
| 458 | 2728531434 | |||
| 459 | 2738817246 | |||
| 460 | 2738838266 | |||
| 461 | 2739232062 | |||
| 462 | 2816863572 | |||
| 463 | 2821118199 | |||
| 464 | 2842685525 | |||
| 465 | 2849140475 | |||
| 466 | 2860838642 | |||
| 467 | 2864736463 | |||
| 468 | 2877769775 | |||
| 469 | 2880170774 | |||
| 470 | 2881638048 | |||
| 471 | 2885529840 | |||
| 472 | 2888584525 | |||
| 473 | 2889048092 | |||
| 474 | 2897110759 | |||
| 475 | 2904168068 | |||
| 476 | 2904494360 | |||
| 477 | 2907207306 | |||
| 478 | 2908666356 | |||
| 479 | 2919093527 | |||
| 480 | 2919165122 | |||
| 481 | 2919415709 | |||
| 482 | 2929207042 | |||
| 483 | 2931385198 | |||
| 484 | 2936364523 | |||
| 485 | 2938652537 | |||
| 486 | 2939680626 | |||
| 487 | 2939706807 | |||
| 488 | 2945996160 | |||
| 489 | 2954775068 | |||
| 490 | 2962292027 | |||
| 491 | 2968559299 | |||
| 492 | 2969138047 | |||
| 493 | 2969771831 | |||
| 494 | 2971410378 | |||
| 495 | 2971514400 | |||
| 496 | 2971894524 | |||
| 497 | 2980180614 | |||
| 498 | 2980190073 | |||
| 499 | 2980493824 | |||
| 500 | 2984531261 | |||
| 501 | 2984537371 | |||
| 502 | 2988227430 | |||
| 503 | 2996637771 | |||
| 504 | 3001273235 | |||
| 505 | 3001895452 | |||
| 506 | 3006989472 | |||
| 507 | 8002324562 | |||
| 508 | 8022633985 | |||
| 509 | 8022655214 | |||
| 510 | 8046997236 | |||
| 511 | 8051953402 | |||
| 512 | 8054471426 | |||
| 513 | 8055633204 | |||
| 514 | 8057981389 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1a1s-assembly1.cif.gz_A | ornithine carbamoyltransferase from pyrococcus furiosus | 0.9818 | 11 | 319 |
| 1dxh-assembly1.cif.gz_A | catabolic ornithine carbamoyltransferase from pseudomonas aeruginosa | 0.9736 | 11 | 321 |
| 1vlv-assembly1.cif.gz_A | crystal structure of ornithine carbamoyltransferase (tm1097) from thermotoga maritima at 2.25 a resolution | 0.9705 | 11 | 319 |
| 3upd-assembly1.cif.gz_A | 2.9 angstrom crystal structure of ornithine carbamoyltransferase (argf) from vibrio vulnificus | 0.9701 | 14 | 321 |
| 4f2g-assembly1.cif.gz_A | the crystal structure of ornithine carbamoyltransferase from burkholderia thailandensis e264 | 0.97 | 17 | 319 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_E9QHD9_33_172_3.40.50.1370 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Aspartate/ornithine carbamoyltransferase | 0.9821 | 12 | 149 | 3.40.50.1370 |
| 4a8pF01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Aspartate/ornithine carbamoyltransferase | 0.9809 | 16 | 159 | 3.40.50.1370 |
| af_O50039_80_205_3.40.50.1370 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Aspartate/ornithine carbamoyltransferase | 0.9786 | 24 | 147 | 3.40.50.1370 |
| af_Q2FUX8_12_142_3.40.50.1370 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Aspartate/ornithine carbamoyltransferase | 0.9762 | 16 | 145 | 3.40.50.1370 |
| af_P05150_153_315_3.40.50.1370 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Aspartate/ornithine carbamoyltransferase | 0.9731 | 164 | 305 | 3.40.50.1370 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7V4Q8K6-F1-model_v4 | Ornithine carbamoyltransferase | 0.9965 | 17 | 134 |
GO:0004585
GO:0016597 GO:0019240 GO:0042450 |
| AF-A0A7W0ZA55-F1-model_v4 | Ornithine carbamoyltransferase (EC 2.1.3.3) | 0.9942 | 29 | 155 |
GO:0004585
GO:0016597 GO:0019240 GO:0042450 |
| AF-A0A316RJP8-F1-model_v4 | deleted | 0.9917 | 17 | 212 |
|
| AF-A0A3D1HBA6-F1-model_v4 | Ornithine carbamoyltransferase (EC 2.1.3.3) | 0.9908 | 59 | 180 |
GO:0004585
GO:0016597 GO:0019240 GO:0042450 |
| AF-A0A5C0NTW3-F1-model_v4 | ornithine carbamoyltransferase (EC 2.1.3.3) | 0.9904 | 102 | 191 |
GO:0006526
GO:0016597 GO:0016743 |