F367195

General Info

Members Datasets Scaffolds Average Seq Length
257 152 514 145

Family's Representative Sequence

Representative Sequence 3300006042|Ga0075368_10004027|Ga0075368_100040279
Length 162
Sequence MTRVDPAARHRAREAALQMLYQSEIGRAGAYETITTFWPANDPDGEIDEEQRGFANGLVRQTLERVQDLDRRLSEHAHNWRVERMAVIDRLVLRLAACELMTQTDTPPKVIINEALELARTFSSEESVPFVNGVLDALRKDVEQERAAAAPGPSDMARNESE

Samples

Sample ID Description Type Environment
1 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
80 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
88 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
89 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
90 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
91 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
94 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
95 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
96 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
97 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
98 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
99 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
102 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
103 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
104 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
105 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
106 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
111 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
112 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
113 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
117 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
131 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
132 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
138 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
139 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
140 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
143 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
144 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
148 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
149 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
150 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
151 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
152 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.06
Nodule 0
Rhizoplane 3.89
Rhizosphere 91.05
Stem 0
Stem Tuber 0
Unclassified 15.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075368_10004027 3300006042 Bacteria 4945
2 Ga0065715_10097086 3300005293 Bacteria 3766
3 Ga0070683_100003797 3300005329 Bacteria 12336
4 Ga0070690_100580891 3300005330 Bacteria 848
5 Ga0070670_100038632 3300005331 Bacteria 4105
6 Ga0070689_100057173 3300005340 Bacteria 3027
7 Ga0070689_100123156 3300005340 Bacteria 2073
8 Ga0070687_100453565 3300005343 Bacteria 853
9 Ga0070661_100008910 3300005344 Bacteria 6944
10 Ga0070669_100005436 3300005353 Bacteria 9191
11 Ga0070669_100254257 3300005353 Bacteria 1400
12 Ga0070688_100109929 3300005365 Bacteria 1832
13 Ga0070659_100133861 3300005366 Bacteria 2015
14 Ga0070701_10432196 3300005438 Bacteria 841
15 Ga0070701_10812800 3300005438 Unclassified 639
16 Ga0070694_101453866 3300005444 Bacteria 579
17 Ga0070708_100116880 3300005445 Bacteria 2456
18 Ga0070681_12017931 3300005458 Unclassified 505
19 Ga0070698_101563634 3300005471 Bacteria 611
20 Ga0070679_101681631 3300005530 Bacteria 582
21 Ga0070684_100000897 3300005535 Bacteria 21069
22 Ga0070697_101949441 3300005536 Unclassified 526
23 Ga0070672_100210781 3300005543 Bacteria 1627
24 Ga0070672_100329357 3300005543 Unclassified 1299
25 Ga0070686_100580735 3300005544 Bacteria 880
26 Ga0070696_100206991 3300005546 Bacteria 1467
27 Ga0070693_100033512 3300005547 Bacteria 2835
28 Ga0070704_100129076 3300005549 Bacteria 1956
29 Ga0070704_100388291 3300005549 Bacteria 1188
30 Ga0070704_100742377 3300005549 Bacteria 873
31 Ga0070664_100003663 3300005564 Bacteria 12374
32 Ga0070664_100090589 3300005564 Bacteria 2647
33 Ga0068857_100003893 3300005577 Bacteria 12567
34 Ga0068857_100205528 3300005577 Bacteria 1796
35 Ga0068857_101659938 3300005577 Unclassified 624
36 Ga0068854_101016890 3300005578 Unclassified 735
37 Ga0068859_100122901 3300005617 Bacteria 2663
38 Ga0068861_100219007 3300005719 Bacteria 1608
39 Ga0068861_100395911 3300005719 Bacteria 1224
40 Ga0068870_10055723 3300005840 Bacteria 2107
41 Ga0068863_100441475 3300005841 Bacteria 1276
42 Ga0068860_100179407 3300005843 Bacteria 2047
43 Ga0068862_100121497 3300005844 Bacteria 2303
44 Ga0075364_10454564 3300006051 Bacteria 875
45 Ga0075367_10004903 3300006178 Bacteria 6592
46 Ga0075367_10835214 3300006178 Bacteria 587
47 Ga0075366_10225380 3300006195 Bacteria 1142
48 Ga0097621_100755542 3300006237 Bacteria 898
49 Ga0097621_101886625 3300006237 Bacteria 570
50 Ga0075428_100185220 3300006844 Bacteria 2253
51 Ga0075430_100003998 3300006846 Bacteria 12434
52 Ga0075430_100444253 3300006846 Bacteria 1070
53 Ga0075431_100063581 3300006847 Bacteria 3808
54 Ga0075431_100064469 3300006847 Bacteria 3783
55 Ga0075431_100263045 3300006847 Bacteria 1750
56 Ga0075431_100875045 3300006847 Bacteria 869
57 Ga0075431_101395121 3300006847 Unclassified 660
58 Ga0075433_10211142 3300006852 Bacteria 1725
59 Ga0075433_10237197 3300006852 Bacteria 1619
60 Ga0075434_100924086 3300006871 Unclassified 887
61 Ga0075434_100929570 3300006871 Bacteria 884
62 Ga0075429_100412056 3300006880 Unclassified 1183
63 Ga0075429_100676135 3300006880 Bacteria 904
64 Ga0097620_100122901 3300006931 Bacteria 2663
65 Ga0075435_100649130 3300007076 Unclassified 916
66 Ga0111539_10007305 3300009094 Bacteria 14144
67 Ga0111539_10020237 3300009094 Bacteria 8200
68 Ga0111539_10054420 3300009094 Bacteria 4762
69 Ga0111539_10202257 3300009094 Bacteria 2316
70 Ga0111539_10287396 3300009094 Bacteria 1914
71 Ga0111539_10888509 3300009094 Unclassified 1036
72 Ga0105247_10101547 3300009101 Bacteria 1839
73 Ga0114129_10007438 3300009147 Bacteria 15600
74 Ga0114129_10013048 3300009147 Bacteria 11835
75 Ga0114129_10014353 3300009147 Bacteria 11291
76 Ga0105243_11086732 3300009148 Bacteria 807
77 Ga0105243_12147526 3300009148 Bacteria 595
78 Ga0105248_10019606 3300009177 Bacteria 7485
79 Ga0105237_10093585 3300009545 Bacteria 2994
80 Ga0105249_10007989 3300009553 Bacteria 9223
81 Ga0105249_10621259 3300009553 Unclassified 1136
82 Ga0105249_11261893 3300009553 Bacteria 810
83 Ga0105246_10327752 3300011119 Bacteria 1247
84 Ga0105246_11793860 3300011119 Bacteria 586
85 Ga0157374_10264155 3300013296 Bacteria 1696
86 Ga0163162_12673842 3300013306 Bacteria 574
87 Ga0163163_10079587 3300014325 Bacteria 3275
88 Ga0157380_10236852 3300014326 Bacteria 1643
89 Ga0157380_11395854 3300014326 Unclassified 751
90 Ga0157380_11754503 3300014326 Unclassified 679
91 Ga0157377_10034663 3300014745 Bacteria 2762
92 Ga0157379_10185742 3300014968 Bacteria 1879
93 Ga0207643_10102747 3300025908 Bacteria 1677
94 Ga0207707_11063923 3300025912 Unclassified 661
95 Ga0207707_11240465 3300025912 Bacteria 602
96 Ga0207649_10034366 3300025920 Bacteria 3037
97 Ga0207652_10707313 3300025921 Bacteria 899
98 Ga0207681_10012343 3300025923 Bacteria 5270
99 Ga0207681_10059677 3300025923 Bacteria 2616
100 Ga0207681_10542853 3300025923 Bacteria 956
101 Ga0207650_10016057 3300025925 Bacteria 5226
102 Ga0207706_10350569 3300025933 Bacteria 1284
103 Ga0207706_10668689 3300025933 Unclassified 889
104 Ga0207691_11194224 3300025940 Unclassified 631
105 Ga0207711_10028600 3300025941 Bacteria 4693
106 Ga0207711_11967719 3300025941 Bacteria 527
107 Ga0207661_10090911 3300025944 Bacteria 2542
108 Ga0207679_10006888 3300025945 Bacteria 7202
109 Ga0207679_10039489 3300025945 Bacteria 3371
110 Ga0207679_11009019 3300025945 Bacteria 763
111 Ga0207712_10004072 3300025961 Bacteria 9224
112 Ga0207640_10535060 3300025981 Bacteria 982
113 Ga0207639_10301026 3300026041 Bacteria 1418
114 Ga0207678_10007437 3300026067 Bacteria 9697
115 Ga0207641_10283262 3300026088 Bacteria 1560
116 Ga0207641_10423100 3300026088 Bacteria 1283
117 Ga0207648_10701441 3300026089 Bacteria 938
118 Ga0207674_10005749 3300026116 Bacteria 14716
119 Ga0207674_11565767 3300026116 Unclassified 628
120 Ga0207675_100012630 3300026118 Bacteria 7892
121 Ga0207675_100515924 3300026118 Bacteria 1191
122 Ga0209813_10092587 3300027866 Bacteria 1017
123 Ga0209813_10126880 3300027866 Bacteria 894
124 Ga0209974_10106162 3300027876 Unclassified 985
125 Ga0207428_10036781 3300027907 Bacteria 3989
126 Ga0207428_10037066 3300027907 Unclassified 3970
127 Ga0268266_10113022 3300028379 Bacteria 2408
128 Ga0268265_10028793 3300028380 Bacteria 3981
129 Ga0268265_10271949 3300028380 Bacteria 1512
130 Ga0268264_10362030 3300028381 Bacteria 1384
131 Ga0307408_100053152 3300031548 Bacteria 2924
132 Ga0307408_100484983 3300031548 Bacteria 1079
133 Ga0307410_10505647 3300031852 Unclassified 995
134 Ga0307407_10119731 3300031903 Bacteria 1667
135 Ga0307412_10203766 3300031911 Bacteria 1504
136 Ga0307409_101000116 3300031995 Bacteria 854
137 Ga0307409_101005634 3300031995 Bacteria 852
138 Ga0307409_102053038 3300031995 Bacteria 601
139 Ga0307416_100024918 3300032002 Bacteria 4376
140 Ga0307416_100346702 3300032002 Bacteria 1501
141 Ga0307416_100523912 3300032002 Bacteria 1254
142 Ga0307416_102160392 3300032002 Bacteria 658
143 Ga0307415_100888732 3300032126 Unclassified 820
144 Ga0395900_1706229 3300037418 Bacteria 541
145 Ga0439453_0056696 3300041408 Bacteria 803
146 Ga0451804_0456176 3300041463 Unclassified 680
147 Ga0450920_054816 3300042122 Bacteria 802
148 Ga0450923_135149 3300042125 Unclassified 589
149 Ga0439446_0199590 3300042156 Bacteria 675
150 Ga0439435_0021267 3300042436 Bacteria 1683
151 Ga0439444_0170584 3300042437 Unclassified 536
152 Ga0451577_0075153 3300042876 Bacteria 3013
153 Ga0451577_0078269 3300042876 Bacteria 2948
154 Ga0451577_0096378 3300042876 Bacteria 2641
155 Ga0453683_0560157 3300044673 Unclassified 744
156 Ga0453684_0046916 3300044712 Bacteria 5738
157 Ga0453684_0054062 3300044712 Bacteria 5234
158 Ga0453684_0229314 3300044712 Bacteria 2145
159 Ga0453684_1638976 3300044712 Bacteria 659
160 Ga0495638_0153051 3300046460 Bacteria 1336
161 Ga0495653_0062725 3300046463 Bacteria 2808
162 Ga0495628_0168764 3300046516 Bacteria 1660
163 Ga0495645_0577175 3300046543 Bacteria 694
164 Ga0495635_1072186 3300046663 Unclassified 511
165 Ga0495599_0199283 3300046678 Unclassified 1230
166 Ga0495600_0450224 3300046809 Unclassified 796
167 Ga0495684_0765552 3300047471 Bacteria 634
168 Ga0496104_0019480 3300048907 Bacteria 6209
169 Ga0496104_0423185 3300048907 Bacteria 1244
170 Ga0496105_0067225 3300048908 Bacteria 2959
171 Ga0496106_0173716 3300048909 Bacteria 1709
172 Ga0496108_0021140 3300048911 Bacteria 5347
173 Ga0496109_0002186 3300048912 Bacteria 16231
174 Ga0496110_0003018 3300048913 Bacteria 12773
175 Ga0496111_0010914 3300048914 Bacteria 6111
176 Ga0496112_0006529 3300048915 Bacteria 10256
177 Ga0501039_0075236 3300049575 Bacteria 2625
178 Ga0501039_0761564 3300049575 Unclassified 756
179 Ga0501040_0151071 3300049576 Bacteria 1638
180 Ga0501040_0549565 3300049576 Bacteria 833
181 Ga0501041_0234440 3300049577 Bacteria 1153
182 Ga0501042_0091479 3300049578 Bacteria 2184
183 Ga0501042_0245413 3300049578 Bacteria 1292
184 Ga0501042_0659892 3300049578 Bacteria 760
185 Ga0501043_0811067 3300049579 Unclassified 676
186 Ga0501046_0123217 3300049580 Bacteria 1971
187 Ga0501046_0366663 3300049580 Bacteria 1044
188 Ga0501048_0558683 3300049582 Unclassified 821
189 Ga0501071_0004149 3300049587 Bacteria 9161
190 Ga0501071_0285808 3300049587 Bacteria 1248
191 Ga0501071_0668543 3300049587 Bacteria 799
192 Ga0501072_0137127 3300049588 Bacteria 1951
193 Ga0501072_0512926 3300049588 Bacteria 948
194 Ga0501072_0973007 3300049588 Unclassified 662
195 Ga0501073_0198928 3300049589 Bacteria 1386
196 Ga0501073_0494219 3300049589 Bacteria 846
197 Ga0501073_1101072 3300049589 Unclassified 546
198 Ga0501075_0040344 3300049591 Bacteria 3496
199 Ga0501075_0380379 3300049591 Bacteria 1076
200 Ga0501076_0007888 3300049592 Bacteria 7762
201 Ga0501076_0161949 3300049592 Bacteria 1823
202 Ga0501076_0253527 3300049592 Bacteria 1440
203 Ga0501076_1506241 3300049592 Bacteria 552
204 Ga0501077_0075724 3300049593 Bacteria 2131
205 Ga0501077_0114413 3300049593 Bacteria 1711
206 Ga0501077_0126644 3300049593 Bacteria 1619
207 Ga0501077_0231007 3300049593 Bacteria 1176
208 Ga0501079_0038184 3300049741 Bacteria 3704
209 Ga0501079_0155758 3300049741 Bacteria 1781
210 Ga0501079_0300899 3300049741 Bacteria 1255
211 Ga0501079_0566508 3300049741 Bacteria 893
212 Ga0501079_0648152 3300049741 Bacteria 831
213 Ga0501081_0050412 3300049743 Bacteria 2868
214 Ga0501081_0086656 3300049743 Bacteria 2199
215 Ga0501081_0430209 3300049743 Bacteria 979
216 Ga0501081_0544082 3300049743 Bacteria 867
217 Ga0501081_0802563 3300049743 Unclassified 708
218 Ga0501083_0332403 3300049744 Bacteria 988
219 Ga0501035_0502331 3300049822 Bacteria 998
220 Ga0501045_0147882 3300049824 Bacteria 1748
221 nmdc:mga00v17_108722_c1 3300050491 Bacteria 1757
222 nmdc:mga0k408_26219_c1 3300050493 Bacteria 3303
223 nmdc:mga06z11_215734_c1 3300050494 Bacteria 1120
224 nmdc:mga06z11_332272_c1 3300050494 Bacteria 908
225 nmdc:mga04h51_92184_c1 3300050495 Bacteria 1092
226 nmdc:mga05p37_31691_c1 3300050507 Bacteria 6460
227 nmdc:mga05p37_42205_c1 3300050507 Bacteria 5604
228 nmdc:mga05p37_42809_c1 3300050507 Bacteria 5566
229 nmdc:mga05p37_434072_c1 3300050507 Bacteria 1525
230 nmdc:mga09592_131806_c1 3300050508 Bacteria 2151
231 nmdc:mga09592_28351_c1 3300050508 Bacteria 4651
232 nmdc:mga0qj67_151394_c1 3300050509 Bacteria 1120
233 nmdc:mga0qj67_28825_c1 3300050509 Bacteria 4311
234 nmdc:mga06r32_1267636_c1 3300050510 Unclassified 682
235 nmdc:mga06r32_480951_c1 3300050510 Bacteria 1220
236 nmdc:mga06r32_68722_c1 3300050510 Bacteria 3423
237 nmdc:mga08y16_160546_c1 3300050511 Bacteria 2336
238 nmdc:mga08y16_253569_c1 3300050511 Bacteria 1818
239 nmdc:mga08y16_631861_c1 3300050511 Bacteria 1077
240 nmdc:mga08y16_70829_c1 3300050511 Bacteria 3634
241 nmdc:mga08y16_88700_c1 3300050511 Bacteria 3223
242 nmdc:mga08y16_953937_c1 3300050511 Unclassified 841
243 nmdc:mga0n895_1785_c1 3300050512 Bacteria 16332
244 nmdc:mga0n895_415375_c1 3300050512 Unclassified 1360
245 nmdc:mga0n895_878174_c1 3300050512 Bacteria 883
246 nmdc:mga0rr50_99912_c1 3300050513 Bacteria 2277
247 nmdc:mga0a205_162002_c1 3300050515 Bacteria 2133
248 nmdc:mga0a205_259901_c1 3300050515 Bacteria 1614
249 Ga0500592_034197 3300053116 Unclassified 820
250 Ga0501084_0154001 3300054114 Bacteria 1938
251 Ga0501084_0446829 3300054114 Bacteria 1093
252 Ga0501084_0590135 3300054114 Bacteria 939
253 Ga0501082_1685016 3300060353 Bacteria 553
254 Ga0501082_1742106 3300060353 Bacteria 543
255 Ga0530510_0026654 3300061734 Bacteria 4138
256 Ga0530510_0123582 3300061734 Bacteria 1901
257 Ga0530510_0260095 3300061734 Bacteria 1294
258 Ga0075368_10004027
259 Ga0065715_10097086
260 Ga0070683_100003797
261 Ga0070690_100580891
262 Ga0070670_100038632
263 Ga0070689_100057173
264 Ga0070689_100123156
265 Ga0070687_100453565
266 Ga0070661_100008910
267 Ga0070669_100005436
268 Ga0070669_100254257
269 Ga0070688_100109929
270 Ga0070659_100133861
271 Ga0070701_10432196
272 Ga0070701_10812800
273 Ga0070694_101453866
274 Ga0070708_100116880
275 Ga0070681_12017931
276 Ga0070698_101563634
277 Ga0070679_101681631
278 Ga0070684_100000897
279 Ga0070697_101949441
280 Ga0070672_100210781
281 Ga0070672_100329357
282 Ga0070686_100580735
283 Ga0070696_100206991
284 Ga0070693_100033512
285 Ga0070704_100129076
286 Ga0070704_100388291
287 Ga0070704_100742377
288 Ga0070664_100003663
289 Ga0070664_100090589
290 Ga0068857_100003893
291 Ga0068857_100205528
292 Ga0068857_101659938
293 Ga0068854_101016890
294 Ga0068859_100122901
295 Ga0068861_100219007
296 Ga0068861_100395911
297 Ga0068870_10055723
298 Ga0068863_100441475
299 Ga0068860_100179407
300 Ga0068862_100121497
301 Ga0075364_10454564
302 Ga0075367_10004903
303 Ga0075367_10835214
304 Ga0075366_10225380
305 Ga0097621_100755542
306 Ga0097621_101886625
307 Ga0075428_100185220
308 Ga0075430_100003998
309 Ga0075430_100444253
310 Ga0075431_100063581
311 Ga0075431_100064469
312 Ga0075431_100263045
313 Ga0075431_100875045
314 Ga0075431_101395121
315 Ga0075433_10211142
316 Ga0075433_10237197
317 Ga0075434_100924086
318 Ga0075434_100929570
319 Ga0075429_100412056
320 Ga0075429_100676135
321 Ga0097620_100122901
322 Ga0075435_100649130
323 Ga0111539_10007305
324 Ga0111539_10020237
325 Ga0111539_10054420
326 Ga0111539_10202257
327 Ga0111539_10287396
328 Ga0111539_10888509
329 Ga0105247_10101547
330 Ga0114129_10007438
331 Ga0114129_10013048
332 Ga0114129_10014353
333 Ga0105243_11086732
334 Ga0105243_12147526
335 Ga0105248_10019606
336 Ga0105237_10093585
337 Ga0105249_10007989
338 Ga0105249_10621259
339 Ga0105249_11261893
340 Ga0105246_10327752
341 Ga0105246_11793860
342 Ga0157374_10264155
343 Ga0163162_12673842
344 Ga0163163_10079587
345 Ga0157380_10236852
346 Ga0157380_11395854
347 Ga0157380_11754503
348 Ga0157377_10034663
349 Ga0157379_10185742
350 Ga0207643_10102747
351 Ga0207707_11063923
352 Ga0207707_11240465
353 Ga0207649_10034366
354 Ga0207652_10707313
355 Ga0207681_10012343
356 Ga0207681_10059677
357 Ga0207681_10542853
358 Ga0207650_10016057
359 Ga0207706_10350569
360 Ga0207706_10668689
361 Ga0207691_11194224
362 Ga0207711_10028600
363 Ga0207711_11967719
364 Ga0207661_10090911
365 Ga0207679_10006888
366 Ga0207679_10039489
367 Ga0207679_11009019
368 Ga0207712_10004072
369 Ga0207640_10535060
370 Ga0207639_10301026
371 Ga0207678_10007437
372 Ga0207641_10283262
373 Ga0207641_10423100
374 Ga0207648_10701441
375 Ga0207674_10005749
376 Ga0207674_11565767
377 Ga0207675_100012630
378 Ga0207675_100515924
379 Ga0209813_10092587
380 Ga0209813_10126880
381 Ga0209974_10106162
382 Ga0207428_10036781
383 Ga0207428_10037066
384 Ga0268266_10113022
385 Ga0268265_10028793
386 Ga0268265_10271949
387 Ga0268264_10362030
388 Ga0307408_100053152
389 Ga0307408_100484983
390 Ga0307410_10505647
391 Ga0307407_10119731
392 Ga0307412_10203766
393 Ga0307409_101000116
394 Ga0307409_101005634
395 Ga0307409_102053038
396 Ga0307416_100024918
397 Ga0307416_100346702
398 Ga0307416_100523912
399 Ga0307416_102160392
400 Ga0307415_100888732
401 Ga0395900_1706229
402 Ga0439453_0056696
403 Ga0451804_0456176
404 Ga0450920_054816
405 Ga0450923_135149
406 Ga0439446_0199590
407 Ga0439435_0021267
408 Ga0439444_0170584
409 Ga0451577_0075153
410 Ga0451577_0078269
411 Ga0451577_0096378
412 Ga0453683_0560157
413 Ga0453684_0046916
414 Ga0453684_0054062
415 Ga0453684_0229314
416 Ga0453684_1638976
417 Ga0495638_0153051
418 Ga0495653_0062725
419 Ga0495628_0168764
420 Ga0495645_0577175
421 Ga0495635_1072186
422 Ga0495599_0199283
423 Ga0495600_0450224
424 Ga0495684_0765552
425 Ga0496104_0019480
426 Ga0496104_0423185
427 Ga0496105_0067225
428 Ga0496106_0173716
429 Ga0496108_0021140
430 Ga0496109_0002186
431 Ga0496110_0003018
432 Ga0496111_0010914
433 Ga0496112_0006529
434 Ga0501039_0075236
435 Ga0501039_0761564
436 Ga0501040_0151071
437 Ga0501040_0549565
438 Ga0501041_0234440
439 Ga0501042_0091479
440 Ga0501042_0245413
441 Ga0501042_0659892
442 Ga0501043_0811067
443 Ga0501046_0123217
444 Ga0501046_0366663
445 Ga0501048_0558683
446 Ga0501071_0004149
447 Ga0501071_0285808
448 Ga0501071_0668543
449 Ga0501072_0137127
450 Ga0501072_0512926
451 Ga0501072_0973007
452 Ga0501073_0198928
453 Ga0501073_0494219
454 Ga0501073_1101072
455 Ga0501075_0040344
456 Ga0501075_0380379
457 Ga0501076_0007888
458 Ga0501076_0161949
459 Ga0501076_0253527
460 Ga0501076_1506241
461 Ga0501077_0075724
462 Ga0501077_0114413
463 Ga0501077_0126644
464 Ga0501077_0231007
465 Ga0501079_0038184
466 Ga0501079_0155758
467 Ga0501079_0300899
468 Ga0501079_0566508
469 Ga0501079_0648152
470 Ga0501081_0050412
471 Ga0501081_0086656
472 Ga0501081_0430209
473 Ga0501081_0544082
474 Ga0501081_0802563
475 Ga0501083_0332403
476 Ga0501035_0502331
477 Ga0501045_0147882
478 nmdc:mga00v17_108722_c1
479 nmdc:mga0k408_26219_c1
480 nmdc:mga06z11_215734_c1
481 nmdc:mga06z11_332272_c1
482 nmdc:mga04h51_92184_c1
483 nmdc:mga05p37_31691_c1
484 nmdc:mga05p37_42205_c1
485 nmdc:mga05p37_42809_c1
486 nmdc:mga05p37_434072_c1
487 nmdc:mga09592_131806_c1
488 nmdc:mga09592_28351_c1
489 nmdc:mga0qj67_151394_c1
490 nmdc:mga0qj67_28825_c1
491 nmdc:mga06r32_1267636_c1
492 nmdc:mga06r32_480951_c1
493 nmdc:mga06r32_68722_c1
494 nmdc:mga08y16_160546_c1
495 nmdc:mga08y16_253569_c1
496 nmdc:mga08y16_631861_c1
497 nmdc:mga08y16_70829_c1
498 nmdc:mga08y16_88700_c1
499 nmdc:mga08y16_953937_c1
500 nmdc:mga0n895_1785_c1
501 nmdc:mga0n895_415375_c1
502 nmdc:mga0n895_878174_c1
503 nmdc:mga0rr50_99912_c1
504 nmdc:mga0a205_162002_c1
505 nmdc:mga0a205_259901_c1
506 Ga0500592_034197
507 Ga0501084_0154001
508 Ga0501084_0446829
509 Ga0501084_0590135
510 Ga0501082_1685016
511 Ga0501082_1742106
512 Ga0530510_0026654
513 Ga0530510_0123582
514 Ga0530510_0260095

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01029

NusB

NusB family

10

140

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d3c-assembly3.cif.gz_C structural and functional analysis of the e. coli nusb-s10 transcription antitermination complex. 0.9299 10 144
3imq-assembly1.cif.gz_A crystal structure of the nusb101-s10(delta loop) complex 0.9296 7 144
1tzx-assembly2.cif.gz_B t. maritima nusb, p3221 0.9143 10 144
3r2d-assembly1.cif.gz_A crystal structure of antitermination factors nusb and nuse in complex with dsrna 0.9115 7 141
5lm7-assembly2.cif.gz_D crystal structure of the lambda n-nus factor complex 0.9071 9 144
ID Description Score Start End Superfamily
af_P0A780_1_139_1.10.940.10 Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like 0.9366 10 144 1.10.940.10
af_P9WGX3_13_148_1.10.940.10 Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like 0.9312 12 138 1.10.940.10
3r2cB00 Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like 0.914 8 145 1.10.940.10
af_Q2FZ67_2_133_1.10.940.10 Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like 0.9124 12 140 1.10.940.10
1tztA00 Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like 0.9115 9 141 1.10.940.10
ID Description Score Start End GO Terms
AF-A0A7Y4U958-F1-model_v4 Transcription antitermination protein NusB (Antitermination factor NusB) 0.9793 8 142 GO:0003723
GO:0005829
GO:0006353
GO:0031564
AF-A0A6N9CEF2-F1-model_v4 Transcription antitermination protein NusB (Antitermination factor NusB) 0.9769 8 142 GO:0003723
GO:0005829
GO:0006353
GO:0031564
AF-A0A3D2P5X5-F1-model_v4 Transcription antitermination protein NusB (Antitermination factor NusB) 0.9768 8 145 GO:0003723
GO:0005829
GO:0006353
GO:0031564
AF-A0A2H0LBD6-F1-model_v4 Transcription antitermination factor NusB 0.9731 6 140 GO:0003723
GO:0005829
GO:0006353
GO:0031564
AF-A0A7C6EPR4-F1-model_v4 Transcription antitermination protein NusB (Antitermination factor NusB) 0.9717 8 141 GO:0003723
GO:0005829
GO:0006353
GO:0031564

Map