F366655

General Info

Members Datasets Scaffolds Average Seq Length
256 168 512 334

Family's Representative Sequence

Representative Sequence 3300036401|Ga0373937_0027361|Ga0373937_0027361_20_1204
Length 394
Sequence VRATACGHGGTGSPAGARDAAIGTNADSRISPHCTSVAGEPFGAPASPPSIFDATVLVPYAELHATMRDILVREGMEPARADHCAQLFADSSRDGVPSHGLNRFGRFVAMIRNGMVDVHARPVRVASHGALERWDGRRGPGNLNAHASMARAIELAREHGVGAVGLGNSNHWMRGGNYGWQAADAGVIGICWSNTLPNVPAWGTSVPLIGNNPLIIAVSRATGHVVLDIAMSQFSYGALAVHRMRGEELPVDGGYDEEGRLTRDPAAIERTQRLLPIGFWKGSGLAILLDVVGATLSGGKATHDFSTVPEEESGQSQAFIAIDVSTLGAAGESQAIVDGIVDALHAGAAAAGEEARYPGEHTLAVRRKNLADGVPVNDDVWREVRALLGSDSFS

Samples

Sample ID Description Type Environment
1 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
2 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
47 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
65 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
76 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
113 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
114 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
115 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
116 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
117 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
118 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
122 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
123 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
124 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
125 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
126 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
127 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
128 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
131 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
132 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
133 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
134 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
135 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
136 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
137 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
138 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
139 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
148 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
155 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
156 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
157 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
158 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
159 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
160 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
161 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
162 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
163 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
164 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
165 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
166 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
167 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
168 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.61
Metatranscriptomes 0
Isolates 0.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.39
Nodule 0
Rhizoplane 7.42
Rhizosphere 89.84
Stem 0
Stem Tuber 0
Unclassified 10.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373937_0027361 3300036401 Bacteria 5156
2 Ga0065165_1004828 3300005262 Bacteria 8021
3 Ga0070658_10044443 3300005327 Bacteria 3590
4 Ga0070658_10078945 3300005327 Bacteria 2702
5 Ga0070683_100023224 3300005329 Bacteria 5546
6 Ga0070683_100075137 3300005329 Unclassified 3157
7 Ga0070682_100060138 3300005337 Unclassified 2402
8 Ga0068868_100040686 3300005338 Bacteria 3618
9 Ga0068868_100061579 3300005338 Bacteria 2973
10 Ga0070660_100024306 3300005339 Bacteria 4495
11 Ga0070661_100024692 3300005344 Bacteria 4312
12 Ga0070668_100003001 3300005347 Bacteria 12472
13 Ga0070668_100004937 3300005347 Bacteria 9876
14 Ga0070669_100053693 3300005353 Unclassified 2950
15 Ga0070674_100010435 3300005356 Bacteria 5617
16 Ga0070688_100033827 3300005365 Bacteria 3091
17 Ga0070659_100017890 3300005366 Bacteria 5340
18 Ga0070667_100100096 3300005367 Bacteria 2503
19 Ga0070703_10006999 3300005406 Bacteria 3161
20 Ga0070713_100077465 3300005436 Bacteria 2827
21 Ga0070701_10082307 3300005438 Unclassified 1745
22 Ga0070705_100003094 3300005440 Bacteria 8183
23 Ga0070694_100006137 3300005444 Bacteria 7291
24 Ga0070694_100047690 3300005444 Bacteria 2880
25 Ga0070708_100009444 3300005445 Bacteria 7863
26 Ga0070708_100349553 3300005445 Unclassified 1393
27 Ga0070662_100168575 3300005457 Unclassified 1718
28 Ga0068867_100112976 3300005459 Unclassified 2089
29 Ga0070706_100000451 3300005467 Bacteria 49196
30 Ga0070706_100013696 3300005467 Bacteria 7499
31 Ga0070706_100020471 3300005467 Bacteria 6097
32 Ga0070706_100189975 3300005467 Bacteria 1919
33 Ga0070707_100000593 3300005468 Bacteria 36467
34 Ga0070707_100037449 3300005468 Bacteria 4629
35 Ga0070698_100000458 3300005471 Bacteria 43247
36 Ga0070698_100002791 3300005471 Bacteria 19233
37 Ga0070699_100219558 3300005518 Bacteria 1694
38 Ga0070679_100015611 3300005530 Bacteria 7298
39 Ga0070679_100043406 3300005530 Bacteria 4479
40 Ga0070684_100150881 3300005535 Bacteria 2105
41 Ga0070697_100000112 3300005536 Bacteria 63499
42 Ga0070697_100000376 3300005536 Bacteria 34915
43 Ga0070697_100009654 3300005536 Bacteria 7538
44 Ga0070697_100179556 3300005536 Bacteria 1794
45 Ga0068853_100124699 3300005539 Unclassified 2300
46 Ga0070672_100218099 3300005543 Bacteria 1599
47 Ga0070686_100028868 3300005544 Bacteria 3368
48 Ga0070695_100003707 3300005545 Bacteria 8902
49 Ga0070695_100005406 3300005545 Bacteria 7517
50 Ga0070695_100171664 3300005545 Bacteria 1530
51 Ga0070696_100002419 3300005546 Bacteria 12367
52 Ga0070693_100000012 3300005547 Bacteria 71975
53 Ga0070693_100068719 3300005547 Bacteria 2080
54 Ga0070693_100155481 3300005547 Bacteria 1452
55 Ga0070704_100000650 3300005549 Bacteria 16774
56 Ga0070704_100204807 3300005549 Bacteria 1595
57 Ga0068855_100034938 3300005563 Bacteria 5990
58 Ga0070664_100017306 3300005564 Bacteria 5917
59 Ga0070664_100022399 3300005564 Bacteria 5208
60 Ga0070664_100056932 3300005564 Bacteria 3322
61 Ga0068857_100010069 3300005577 Bacteria 8214
62 Ga0068857_100037844 3300005577 Bacteria 4274
63 Ga0068854_100005857 3300005578 Bacteria 7784
64 Ga0068856_100011994 3300005614 Bacteria 8394
65 Ga0068864_100015461 3300005618 Bacteria 6346
66 Ga0068864_100147717 3300005618 Unclassified 2126
67 Ga0068861_100110873 3300005719 Unclassified 2198
68 Ga0068863_100076341 3300005841 Bacteria 3170
69 Ga0068862_100018086 3300005844 Bacteria 5870
70 Ga0070716_100058111 3300006173 Bacteria 2224
71 Ga0070712_100000458 3300006175 Bacteria 23388
72 Ga0097621_100208405 3300006237 Unclassified 1699
73 Ga0075430_100018477 3300006846 Bacteria 5932
74 Ga0075431_100097487 3300006847 Bacteria 3036
75 Ga0075431_100207225 3300006847 Bacteria 2004
76 Ga0075433_10031839 3300006852 Bacteria 4512
77 Ga0075433_10073765 3300006852 Bacteria 3002
78 Ga0075434_100111362 3300006871 Bacteria 2748
79 Ga0075429_100102155 3300006880 Bacteria 2503
80 Ga0075436_100068974 3300006914 Bacteria 2443
81 Ga0075436_100103857 3300006914 Bacteria 1980
82 Ga0075436_100211191 3300006914 Bacteria 1376
83 Ga0105245_10053722 3300009098 Bacteria 3616
84 Ga0105245_10214181 3300009098 Unclassified 1855
85 Ga0105247_10035259 3300009101 Unclassified 3049
86 Ga0114129_10000422 3300009147 Bacteria 50170
87 Ga0114129_10003105 3300009147 Bacteria 23290
88 Ga0114129_10005164 3300009147 Bacteria 18373
89 Ga0114129_10011051 3300009147 Bacteria 12860
90 Ga0105243_10021410 3300009148 Bacteria 4907
91 Ga0105241_10005329 3300009174 Bacteria 9503
92 Ga0105241_10022227 3300009174 Bacteria 4696
93 Ga0105241_10147904 3300009174 Bacteria 1919
94 Ga0105242_10416349 3300009176 Bacteria 1258
95 Ga0105248_10068251 3300009177 Bacteria 3992
96 Ga0105248_10133264 3300009177 Unclassified 2803
97 Ga0105249_10020065 3300009553 Bacteria 5970
98 Ga0105239_10103979 3300010375 Bacteria 3144
99 Ga0105246_10035595 3300011119 Bacteria 3329
100 Ga0157373_10043508 3300013100 Bacteria 3208
101 Ga0157369_10229991 3300013105 Bacteria 1939
102 Ga0157378_10061536 3300013297 Unclassified 3350
103 Ga0157378_10067876 3300013297 Bacteria 3197
104 Ga0157378_10142381 3300013297 Bacteria 2227
105 Ga0163162_10021390 3300013306 Bacteria 6370
106 Ga0163162_10044172 3300013306 Bacteria 4462
107 Ga0163162_10623816 3300013306 Bacteria 1203
108 Ga0157372_10012272 3300013307 Bacteria 9127
109 Ga0157372_10049911 3300013307 Bacteria 4655
110 Ga0157375_10043431 3300013308 Bacteria 4360
111 Ga0157375_10208093 3300013308 Unclassified 2113
112 Ga0163163_10235461 3300014325 Bacteria 1880
113 Ga0163163_10541372 3300014325 Bacteria 1226
114 Ga0157380_10434201 3300014326 Bacteria 1256
115 Ga0157379_10001094 3300014968 Bacteria 22129
116 Ga0163161_10113823 3300017792 Bacteria 2025
117 Ga0213876_10006682 3300021384 Bacteria 6296
118 Ga0207682_10024537 3300025893 Bacteria 2388
119 Ga0207699_10268511 3300025906 Bacteria 1181
120 Ga0207645_10029337 3300025907 Bacteria 3548
121 Ga0207705_10187497 3300025909 Bacteria 1563
122 Ga0207684_10003366 3300025910 Bacteria 15657
123 Ga0207684_10010839 3300025910 Bacteria 7997
124 Ga0207684_10175053 3300025910 Bacteria 1850
125 Ga0207654_10011070 3300025911 Bacteria 4591
126 Ga0207654_10024325 3300025911 Bacteria 3255
127 Ga0207707_10045192 3300025912 Bacteria 3838
128 Ga0207707_10150659 3300025912 Bacteria 2034
129 Ga0207707_10360406 3300025912 Unclassified 1252
130 Ga0207693_10000128 3300025915 Bacteria 68157
131 Ga0207663_10004880 3300025916 Bacteria 6716
132 Ga0207657_10001800 3300025919 Bacteria 23117
133 Ga0207657_10034358 3300025919 Bacteria 4560
134 Ga0207649_10019866 3300025920 Bacteria 3846
135 Ga0207652_10020922 3300025921 Bacteria 5394
136 Ga0207652_10118893 3300025921 Bacteria 2350
137 Ga0207646_10001087 3300025922 Bacteria 34575
138 Ga0207646_10041008 3300025922 Bacteria 4162
139 Ga0207687_10004333 3300025927 Bacteria 9473
140 Ga0207687_10268864 3300025927 Bacteria 1362
141 Ga0207690_10027901 3300025932 Bacteria 3572
142 Ga0207690_10067873 3300025932 Bacteria 2447
143 Ga0207690_10185676 3300025932 Bacteria 1569
144 Ga0207706_10000075 3300025933 Bacteria 102980
145 Ga0207706_10033462 3300025933 Bacteria 4575
146 Ga0207706_10147031 3300025933 Bacteria 2073
147 Ga0207669_10075881 3300025937 Bacteria 2132
148 Ga0207669_10343911 3300025937 Unclassified 1150
149 Ga0207691_10027368 3300025940 Bacteria 5345
150 Ga0207691_10100917 3300025940 Bacteria 2575
151 Ga0207711_10086121 3300025941 Unclassified 2754
152 Ga0207661_10029059 3300025944 Bacteria 4243
153 Ga0207661_10088413 3300025944 Bacteria 2575
154 Ga0207679_10042443 3300025945 Bacteria 3269
155 Ga0207679_10054331 3300025945 Bacteria 2948
156 Ga0207679_10090673 3300025945 Bacteria 2363
157 Ga0207667_10015261 3300025949 Bacteria 8735
158 Ga0207668_10036960 3300025972 Bacteria 3264
159 Ga0207668_10296701 3300025972 Bacteria 1332
160 Ga0207640_10011823 3300025981 Bacteria 4954
161 Ga0207640_10181689 3300025981 Bacteria 1578
162 Ga0207677_10002539 3300026023 Bacteria 9573
163 Ga0207677_10286890 3300026023 Unclassified 1354
164 Ga0207678_10004879 3300026067 Bacteria 12045
165 Ga0207678_10285286 3300026067 Bacteria 1418
166 Ga0207708_10087101 3300026075 Unclassified 2404
167 Ga0207702_10016556 3300026078 Bacteria 6101
168 Ga0207641_10011010 3300026088 Bacteria 7418
169 Ga0207648_10008337 3300026089 Bacteria 10054
170 Ga0207674_10008860 3300026116 Bacteria 11575
171 Ga0207674_10010091 3300026116 Bacteria 10739
172 Ga0207674_10010878 3300026116 Bacteria 10251
173 Ga0207675_100030609 3300026118 Bacteria 5014
174 Ga0207675_100154517 3300026118 Bacteria 2186
175 Ga0207683_10075480 3300026121 Bacteria 2984
176 Ga0207683_10217944 3300026121 Bacteria 1738
177 Ga0207698_10277630 3300026142 Bacteria 1548
178 Ga0268264_10023174 3300028381 Bacteria 5067
179 Ga0307416_100260446 3300032002 Bacteria 1695
180 Ga0307510_10154795 3300033180 Bacteria 1901
181 Ga0373949_0047055 3300035090 Bacteria 1077
182 Ga0373939_0031482 3300035114 Bacteria 1534
183 Ga0373931_0148298 3300035691 Bacteria 1365
184 Ga0373925_0003072 3300037068 Bacteria 13126
185 Ga0436365_0391692 3300039437 Bacteria 35650
186 Ga0436365_1527160 3300039437 Bacteria 1610
187 Ga0451577_0011706 3300042876 Bacteria 8282
188 Ga0453684_0015257 3300044712 Bacteria 12182
189 Ga0451576_0038757 3300045051 Bacteria 5044
190 Ga0451576_0113910 3300045051 Bacteria 2815
191 Ga0495651_0069260 3300046462 Bacteria 2688
192 Ga0495580_0094271 3300046472 Bacteria 2083
193 Ga0495664_0034375 3300046477 Bacteria 2982
194 Ga0495652_0180752 3300046529 Bacteria 1619
195 Ga0495587_0006141 3300046536 Bacteria 7839
196 Ga0495587_0149111 3300046536 Unclassified 1333
197 Ga0495621_0066797 3300046539 Bacteria 1316
198 Ga0495669_0086980 3300046684 Unclassified 1440
199 Ga0495604_0204607 3300047317 Unclassified 1367
200 Ga0495674_0002557 3300047319 Bacteria 17736
201 Ga0495615_0023928 3300048090 Bacteria 1404
202 Ga0496100_0152464 3300048903 Bacteria 1650
203 Ga0496101_0012422 3300048904 Bacteria 5684
204 Ga0496102_0001011 3300048905 Bacteria 26353
205 Ga0496102_0104221 3300048905 Bacteria 2638
206 Ga0496103_0037888 3300048906 Bacteria 2957
207 Ga0496104_0190201 3300048907 Bacteria 1964
208 Ga0496106_0001891 3300048909 Bacteria 15680
209 Ga0496106_0265433 3300048909 Bacteria 1374
210 Ga0496107_0018259 3300048910 Unclassified 4937
211 Ga0496108_0112266 3300048911 Bacteria 2332
212 Ga0496109_0225662 3300048912 Bacteria 1762
213 Ga0496109_0275401 3300048912 Bacteria 1586
214 Ga0496112_0099409 3300048915 Bacteria 2879
215 Ga0496112_0116045 3300048915 Bacteria 2648
216 Ga0496112_0150146 3300048915 Bacteria 2297
217 Ga0496113_0006523 3300048916 Bacteria 7405
218 Ga0496113_0118437 3300048916 Unclassified 2068
219 Ga0496114_0363640 3300048917 Bacteria 1280
220 Ga0496115_0226712 3300048918 Bacteria 1541
221 Ga0496121_0000026 3300048924 Bacteria 450157
222 Ga0501041_0071508 3300049577 Bacteria 2130
223 Ga0501041_0106582 3300049577 Bacteria 1737
224 Ga0501072_0060823 3300049588 Bacteria 2978
225 Ga0501074_0023726 3300049590 Bacteria 4459
226 Ga0501075_0068875 3300049591 Bacteria 2674
227 Ga0501079_0077542 3300049741 Bacteria 2570
228 Ga0501080_0224783 3300049742 Bacteria 1717
229 Ga0501080_0239342 3300049742 Bacteria 1657
230 Ga0501081_0014644 3300049743 Bacteria 5176
231 Ga0501044_0056180 3300049823 Bacteria 4041
232 nmdc:mga05p37_135071_c1 3300050507 Bacteria 3026
233 nmdc:mga05p37_21673_c1 3300050507 Bacteria 7784
234 nmdc:mga05p37_57481_c1 3300050507 Bacteria 4791
235 nmdc:mga05p37_76319_c1 3300050507 Bacteria 4126
236 nmdc:mga09592_31962_c1 3300050508 Bacteria 3939
237 nmdc:mga0qj67_72234_c1 3300050509 Bacteria 2755
238 nmdc:mga06r32_203577_c1 3300050510 Bacteria 1967
239 nmdc:mga06r32_53222_c1 3300050510 Bacteria 3878
240 nmdc:mga08y16_559689_c1 3300050511 Bacteria 1156
241 nmdc:mga0n895_51911_c1 3300050512 Bacteria 4024
242 nmdc:mga0n895_65467_c1 3300050512 Bacteria 3597
243 nmdc:mga08x19_10345_c1 3300050514 Bacteria 5600
244 nmdc:mga08x19_241675_c1 3300050514 Bacteria 1245
245 nmdc:mga08x19_30005_c2 3300050514 Bacteria 2467
246 nmdc:mga0a205_32999_c1 3300050515 Bacteria 4964
247 nmdc:mga0a205_61520_c1 3300050515 Unclassified 3626
248 Ga0501084_0075224 3300054114 Bacteria 2829
249 Ga0590071_000638 3300059421 Bacteria 9944
250 Ga0590074_004725 3300059423 Bacteria 2248
251 Ga0590075_000376 3300059424 Bacteria 12226
252 Ga0590077_000355 3300059426 Bacteria 12934
253 Ga0590077_001581 3300059426 Bacteria 5239
254 Ga0501082_0236926 3300060353 Bacteria 1588
255 Ga0530510_0089697 3300061734 Bacteria 2242
256 2925327201 2925326138 Bacteria 9652120
257 Ga0373937_0027361
258 Ga0065165_1004828
259 Ga0070658_10044443
260 Ga0070658_10078945
261 Ga0070683_100023224
262 Ga0070683_100075137
263 Ga0070682_100060138
264 Ga0068868_100040686
265 Ga0068868_100061579
266 Ga0070660_100024306
267 Ga0070661_100024692
268 Ga0070668_100003001
269 Ga0070668_100004937
270 Ga0070669_100053693
271 Ga0070674_100010435
272 Ga0070688_100033827
273 Ga0070659_100017890
274 Ga0070667_100100096
275 Ga0070703_10006999
276 Ga0070713_100077465
277 Ga0070701_10082307
278 Ga0070705_100003094
279 Ga0070694_100006137
280 Ga0070694_100047690
281 Ga0070708_100009444
282 Ga0070708_100349553
283 Ga0070662_100168575
284 Ga0068867_100112976
285 Ga0070706_100000451
286 Ga0070706_100013696
287 Ga0070706_100020471
288 Ga0070706_100189975
289 Ga0070707_100000593
290 Ga0070707_100037449
291 Ga0070698_100000458
292 Ga0070698_100002791
293 Ga0070699_100219558
294 Ga0070679_100015611
295 Ga0070679_100043406
296 Ga0070684_100150881
297 Ga0070697_100000112
298 Ga0070697_100000376
299 Ga0070697_100009654
300 Ga0070697_100179556
301 Ga0068853_100124699
302 Ga0070672_100218099
303 Ga0070686_100028868
304 Ga0070695_100003707
305 Ga0070695_100005406
306 Ga0070695_100171664
307 Ga0070696_100002419
308 Ga0070693_100000012
309 Ga0070693_100068719
310 Ga0070693_100155481
311 Ga0070704_100000650
312 Ga0070704_100204807
313 Ga0068855_100034938
314 Ga0070664_100017306
315 Ga0070664_100022399
316 Ga0070664_100056932
317 Ga0068857_100010069
318 Ga0068857_100037844
319 Ga0068854_100005857
320 Ga0068856_100011994
321 Ga0068864_100015461
322 Ga0068864_100147717
323 Ga0068861_100110873
324 Ga0068863_100076341
325 Ga0068862_100018086
326 Ga0070716_100058111
327 Ga0070712_100000458
328 Ga0097621_100208405
329 Ga0075430_100018477
330 Ga0075431_100097487
331 Ga0075431_100207225
332 Ga0075433_10031839
333 Ga0075433_10073765
334 Ga0075434_100111362
335 Ga0075429_100102155
336 Ga0075436_100068974
337 Ga0075436_100103857
338 Ga0075436_100211191
339 Ga0105245_10053722
340 Ga0105245_10214181
341 Ga0105247_10035259
342 Ga0114129_10000422
343 Ga0114129_10003105
344 Ga0114129_10005164
345 Ga0114129_10011051
346 Ga0105243_10021410
347 Ga0105241_10005329
348 Ga0105241_10022227
349 Ga0105241_10147904
350 Ga0105242_10416349
351 Ga0105248_10068251
352 Ga0105248_10133264
353 Ga0105249_10020065
354 Ga0105239_10103979
355 Ga0105246_10035595
356 Ga0157373_10043508
357 Ga0157369_10229991
358 Ga0157378_10061536
359 Ga0157378_10067876
360 Ga0157378_10142381
361 Ga0163162_10021390
362 Ga0163162_10044172
363 Ga0163162_10623816
364 Ga0157372_10012272
365 Ga0157372_10049911
366 Ga0157375_10043431
367 Ga0157375_10208093
368 Ga0163163_10235461
369 Ga0163163_10541372
370 Ga0157380_10434201
371 Ga0157379_10001094
372 Ga0163161_10113823
373 Ga0213876_10006682
374 Ga0207682_10024537
375 Ga0207699_10268511
376 Ga0207645_10029337
377 Ga0207705_10187497
378 Ga0207684_10003366
379 Ga0207684_10010839
380 Ga0207684_10175053
381 Ga0207654_10011070
382 Ga0207654_10024325
383 Ga0207707_10045192
384 Ga0207707_10150659
385 Ga0207707_10360406
386 Ga0207693_10000128
387 Ga0207663_10004880
388 Ga0207657_10001800
389 Ga0207657_10034358
390 Ga0207649_10019866
391 Ga0207652_10020922
392 Ga0207652_10118893
393 Ga0207646_10001087
394 Ga0207646_10041008
395 Ga0207687_10004333
396 Ga0207687_10268864
397 Ga0207690_10027901
398 Ga0207690_10067873
399 Ga0207690_10185676
400 Ga0207706_10000075
401 Ga0207706_10033462
402 Ga0207706_10147031
403 Ga0207669_10075881
404 Ga0207669_10343911
405 Ga0207691_10027368
406 Ga0207691_10100917
407 Ga0207711_10086121
408 Ga0207661_10029059
409 Ga0207661_10088413
410 Ga0207679_10042443
411 Ga0207679_10054331
412 Ga0207679_10090673
413 Ga0207667_10015261
414 Ga0207668_10036960
415 Ga0207668_10296701
416 Ga0207640_10011823
417 Ga0207640_10181689
418 Ga0207677_10002539
419 Ga0207677_10286890
420 Ga0207678_10004879
421 Ga0207678_10285286
422 Ga0207708_10087101
423 Ga0207702_10016556
424 Ga0207641_10011010
425 Ga0207648_10008337
426 Ga0207674_10008860
427 Ga0207674_10010091
428 Ga0207674_10010878
429 Ga0207675_100030609
430 Ga0207675_100154517
431 Ga0207683_10075480
432 Ga0207683_10217944
433 Ga0207698_10277630
434 Ga0268264_10023174
435 Ga0307416_100260446
436 Ga0307510_10154795
437 Ga0373949_0047055
438 Ga0373939_0031482
439 Ga0373931_0148298
440 Ga0373925_0003072
441 Ga0436365_0391692
442 Ga0436365_1527160
443 Ga0451577_0011706
444 Ga0453684_0015257
445 Ga0451576_0038757
446 Ga0451576_0113910
447 Ga0495651_0069260
448 Ga0495580_0094271
449 Ga0495664_0034375
450 Ga0495652_0180752
451 Ga0495587_0006141
452 Ga0495587_0149111
453 Ga0495621_0066797
454 Ga0495669_0086980
455 Ga0495604_0204607
456 Ga0495674_0002557
457 Ga0495615_0023928
458 Ga0496100_0152464
459 Ga0496101_0012422
460 Ga0496102_0001011
461 Ga0496102_0104221
462 Ga0496103_0037888
463 Ga0496104_0190201
464 Ga0496106_0001891
465 Ga0496106_0265433
466 Ga0496107_0018259
467 Ga0496108_0112266
468 Ga0496109_0225662
469 Ga0496109_0275401
470 Ga0496112_0099409
471 Ga0496112_0116045
472 Ga0496112_0150146
473 Ga0496113_0006523
474 Ga0496113_0118437
475 Ga0496114_0363640
476 Ga0496115_0226712
477 Ga0496121_0000026
478 Ga0501041_0071508
479 Ga0501041_0106582
480 Ga0501072_0060823
481 Ga0501074_0023726
482 Ga0501075_0068875
483 Ga0501079_0077542
484 Ga0501080_0224783
485 Ga0501080_0239342
486 Ga0501081_0014644
487 Ga0501044_0056180
488 nmdc:mga05p37_135071_c1
489 nmdc:mga05p37_21673_c1
490 nmdc:mga05p37_57481_c1
491 nmdc:mga05p37_76319_c1
492 nmdc:mga09592_31962_c1
493 nmdc:mga0qj67_72234_c1
494 nmdc:mga06r32_203577_c1
495 nmdc:mga06r32_53222_c1
496 nmdc:mga08y16_559689_c1
497 nmdc:mga0n895_51911_c1
498 nmdc:mga0n895_65467_c1
499 nmdc:mga08x19_10345_c1
500 nmdc:mga08x19_241675_c1
501 nmdc:mga08x19_30005_c2
502 nmdc:mga0a205_32999_c1
503 nmdc:mga0a205_61520_c1
504 Ga0501084_0075224
505 Ga0590071_000638
506 Ga0590074_004725
507 Ga0590075_000376
508 Ga0590077_000355
509 Ga0590077_001581
510 Ga0501082_0236926
511 Ga0530510_0089697
512 2925327201

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02615

Ldh_2

Malate/L-lactate dehydrogenase

58

385

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1s20-assembly3.cif.gz_E a novel nad binding protein revealed by the crystal structure of e. coli 2,3-diketogulonate reductase (yiak) northeast structural genomics consortium target er82 0.9344 1 322
1s20-assembly3.cif.gz_E a novel nad binding protein revealed by the crystal structure of e. coli 2,3-diketogulonate reductase (yiak) northeast structural genomics consortium target er82 0.9289 1 322
3i0p-assembly1.cif.gz_A-2 crystal structure of malate dehydrogenase from entamoeba histolytica 0.9114 1 322
3i0p-assembly1.cif.gz_A-2 crystal structure of malate dehydrogenase from entamoeba histolytica 0.9061 1 322
2g8y-assembly1.cif.gz_B the structure of a putative malate/lactate dehydrogenase from e. coli. 0.9058 1 320
ID Description Score Start End Superfamily
1s20A03 Alpha Beta;2-Layer Sandwich;Wheat Germ Agglutinin (Isolectin 2); domain 1;Hypothetical oxidoreductase yiak; domain 3 1.002 184 221 3.30.60.50
1s20C01 Mainly Alpha;Orthogonal Bundle;Hypothetical Oxidoreductase Yiak; Chain: A, domain 1;Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.9781 2 64 1.10.1530.10
1nxuB03 Alpha Beta;2-Layer Sandwich;Wheat Germ Agglutinin (Isolectin 2); domain 1;Hypothetical oxidoreductase yiak; domain 3 0.9617 179 221 3.30.60.50
af_Q9VP68_93_150_1.10.1530.10 Mainly Alpha;Orthogonal Bundle;Hypothetical Oxidoreductase Yiak; Chain: A, domain 1;Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.9549 3 56 1.10.1530.10
1s20A03 Alpha Beta;2-Layer Sandwich;Wheat Germ Agglutinin (Isolectin 2); domain 1;Hypothetical oxidoreductase yiak; domain 3 0.9525 184 221 3.30.60.50
ID Description Score Start End GO Terms
AF-A0A382UR83-F1-model_v4 3-dehydro-L-gulonate 2-dehydrogenase 0.9738 1 180 GO:0016491
AF-A0A848ZSE4-F1-model_v4 2,3-diketo-L-gulonate reductase (EC 1.1.1.130) 0.9724 1 107 GO:0016491
AF-A0A7X9PKM0-F1-model_v4 Ldh family oxidoreductase 0.971 1 117 GO:0016491
AF-A0A662CVL8-F1-model_v4 2,3-diketo-L-gulonate reductase (EC 1.1.1.130) 0.97 1 175 GO:0047559
AF-X1UEY0-F1-model_v4 Malate dehydrogenase 0.9688 1 122 GO:0016491

Map