F366534

General Info

Members Datasets Scaffolds Average Seq Length
256 203 169 363

Family's Representative Sequence

Representative Sequence 3300021388|Ga0213875_10017297|Ga0213875_100172973
Length 379
Sequence VNARRRGASLVKLVVFGLTISSSWGNGHATLWRGLQRALAERGWRVTFFERNTTFYAQNRDIDEIPCGELIFYESWPEIEARARREVAGADVAMVTSYCPDGIAATEIVLGAARALRVFYDLDTPVTLERLRRGEATTYIGPRGLDEYDLVLSFTGGVALDGLAELAGARHPVPFYGHVDPQVHRPAASAERYRADFSYIGTYAEDRQSALNRLFIAPASRRPDLRFVLAGAQYPPSFPWTPNIFFVRHLPPAQHASFYASSRLTLNVTRNDMAKAGWCPSGRLFEAAACGTPILSDSWEGLSSFFEPGREILVGEDCEDVIAALDLSNEELARVGASARERVLAEHTSAHRAAQFEEMVAKAASSRGELDMAVSEAEA

Samples

Sample ID Description Type Environment
1 2507262055 Bradyrhizobium sp. WSM1417 Isolate Nodule
2 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
3 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
4 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
5 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
6 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
7 2515154112 Bradyrhizobium sp. WSM4349 Isolate Nodule
8 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
9 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
10 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
11 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
12 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
13 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
14 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
15 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
16 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
17 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
18 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
19 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
20 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
21 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
22 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
23 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
24 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
25 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
26 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
27 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
28 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
29 2879127579 Bradyrhizobium canariense UBMA052 Isolate Nodule
30 2879142872 Bradyrhizobium canariense UBMA061 Isolate Nodule
31 2881364244 Bradyrhizobium sp. RP6 Isolate Unclassified
32 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
33 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
34 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
35 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
36 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
37 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
38 2932828146 Bradyrhizobium sp. S3.9.2 Isolate Nodule
39 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
40 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
41 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
42 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
43 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
44 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
45 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
46 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
47 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
48 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
49 2935908558 Bradyrhizobium sp. F1.1.1 Isolate Nodule
50 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
51 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
52 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
53 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
54 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
55 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
56 2935975950 Bradyrhizobium sp. GM2.2 Isolate Nodule
57 2935984226 Bradyrhizobium sp. i1.15.2 Isolate Nodule
58 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
59 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
60 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
61 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
62 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
63 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
64 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
65 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
66 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
67 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
68 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
69 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
70 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
71 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
72 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
73 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
74 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
75 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
76 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
77 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
78 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
79 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
80 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
81 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
82 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
83 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
84 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
85 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
86 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
87 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
88 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
89 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
90 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
91 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
92 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
93 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
95 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
98 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
99 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
100 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
101 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
102 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
103 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
108 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
116 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
117 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
118 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
119 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
120 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
121 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
122 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
123 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
124 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
125 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
126 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
127 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
128 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
129 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
130 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
131 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
132 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
133 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
134 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
135 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
136 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
137 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
138 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
139 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
140 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
141 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
142 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
143 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
144 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
145 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
146 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
147 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
148 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
149 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
150 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
151 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
152 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
153 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
154 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
155 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
158 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
159 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
164 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
165 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
166 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
167 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
168 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
174 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
175 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
178 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
179 3300059652 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 72R_SD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
180 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
181 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
182 8016511872 Bradyrhizobium sp. S3.14.4 Isolate Nodule
183 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
184 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
185 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
186 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
187 8016575299 Bradyrhizobium sp. LM2.9 Isolate Nodule
188 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
189 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
190 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
191 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
192 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
193 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
194 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
195 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
196 8019619141 Bradyrhizobium sp. GM7.3 Isolate Nodule
197 8019629233 Bradyrhizobium sp. GM6.1 Isolate Nodule
198 8019638758 Bradyrhizobium sp. GM5.1 Isolate Nodule
199 8019659431 Bradyrhizobium sp. GM22.5 Isolate Nodule
200 8019668869 Bradyrhizobium sp. GM2.4 Isolate Nodule
201 8019687851 Bradyrhizobium sp. F1.13.4 Isolate Nodule
202 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule
203 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 64.84
Metatranscriptomes 1.17
Isolates 33.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.12
Nodule 33.98
Rhizoplane 5.08
Rhizosphere 45.7
Stem 0
Stem Tuber 0
Unclassified 12.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10023535 3300003322 Bacteria 1978
2 Ga0070680_100000072 3300005336 Bacteria 53846
3 Ga0070680_100014958 3300005336 Bacteria 6073
4 Ga0070660_100062091 3300005339 Bacteria 2902
5 Ga0070709_10212339 3300005434 Bacteria 1376
6 Ga0070714_100149695 3300005435 Bacteria 2102
7 Ga0070679_100068143 3300005530 Bacteria 3550
8 Ga0068855_100007273 3300005563 Bacteria 13418
9 Ga0068856_100187907 3300005614 Bacteria 2080
10 Ga0068852_100007038 3300005616 Bacteria 8192
11 Ga0068859_100095783 3300005617 Bacteria 3021
12 Ga0070717_10180664 3300006028 Unclassified 1839
13 Ga0075434_100000641 3300006871 Bacteria 27050
14 Ga0075434_100135098 3300006871 Bacteria 2486
15 Ga0097620_100095780 3300006931 Bacteria 3021
16 Ga0099824_1022134 3300006942 Bacteria 4259
17 Ga0099823_1028728 3300006944 Bacteria 4756
18 Ga0111539_10016657 3300009094 Bacteria 9110
19 Ga0157374_10276028 3300013296 Bacteria 1658
20 Ga0157372_10024259 3300013307 Bacteria 6585
21 Ga0157372_10335902 3300013307 Bacteria 1760
22 Ga0163163_10006147 3300014325 Bacteria 10463
23 Ga0182008_10019471 3300014497 Bacteria 3502
24 Ga0214544_1000004 3300021320 Bacteria 455869
25 Ga0214542_1000001 3300021321 Bacteria 1018696
26 Ga0214545_1000001 3300021324 Bacteria 1092817
27 Ga0214545_1019700 3300021324 Bacteria 5681
28 Ga0214543_1000006 3300021327 Bacteria 443395
29 Ga0214543_1025773 3300021327 Bacteria 3312
30 Ga0213874_10007475 3300021377 Bacteria 2625
31 Ga0213876_10000616 3300021384 Bacteria 26212
32 Ga0213876_10001363 3300021384 Bacteria 15279
33 Ga0213875_10017297 3300021388 Bacteria 3484
34 Ga0209233_1002385 3300025261 Bacteria 6949
35 Ga0209455_1007281 3300025272 Bacteria 3145
36 Ga0209455_1011219 3300025272 Bacteria 2222
37 Ga0209758_1005239 3300025297 Bacteria 10158
38 Ga0207660_10001424 3300025917 Bacteria 16048
39 Ga0207660_10029832 3300025917 Bacteria 3745
40 Ga0207678_10111389 3300026067 Bacteria 2335
41 Ga0209389_1000010 3300027296 Bacteria 223892
42 Ga0209389_1000216 3300027296 Bacteria 40414
43 Ga0209589_1000016 3300027357 Bacteria 223788
44 Ga0209489_100016 3300027361 Bacteria 223873
45 Ga0209489_102145 3300027361 Bacteria 40414
46 Ga0265339_10006604 3300031249 Bacteria 7591
47 Ga0307413_10042496 3300031824 Bacteria 2672
48 Ga0307406_10014801 3300031901 Bacteria 4496
49 Ga0307412_10051838 3300031911 Unclassified 2714
50 Ga0307409_100000247 3300031995 Bacteria 21734
51 Ga0307409_100044944 3300031995 Bacteria 3330
52 Ga0307416_100001545 3300032002 Bacteria 12583
53 Ga0307416_100159994 3300032002 Bacteria 2080
54 Ga0307414_10082702 3300032004 Bacteria 2355
55 Ga0307415_100000248 3300032126 Bacteria 23334
56 Ga0307415_100021208 3300032126 Bacteria 3988
57 Ga0307415_100070182 3300032126 Bacteria 2459
58 Ga0307415_100098145 3300032126 Bacteria 2140
59 Ga0373931_0056645 3300035691 Bacteria 2101
60 Ga0395900_0000394 3300037418 Bacteria 63170
61 Ga0395900_0008798 3300037418 Bacteria 10373
62 Ga0395898_0006497 3300037466 Bacteria 12489
63 Ga0395898_0011909 3300037466 Bacteria 9008
64 Ga0395898_0141039 3300037466 Bacteria 2307
65 Ga0395898_0343728 3300037466 Bacteria 1423
66 Ga0395905_0092141 3300037471 Bacteria 2842
67 Ga0436364_0279818 3300037853 Bacteria 5852
68 Ga0436364_0941071 3300037853 Bacteria 4320
69 Ga0395901_0025614 3300038443 Bacteria 6055
70 Ga0395901_0175344 3300038443 Bacteria 2249
71 Ga0395901_0195271 3300038443 Bacteria 2122
72 Ga0436365_0100037 3300039437 Bacteria 13585
73 Ga0436365_0346567 3300039437 Bacteria 2617
74 Ga0436365_0403425 3300039437 Bacteria 50449
75 Ga0436365_0641427 3300039437 Bacteria 1981
76 Ga0436365_1364825 3300039437 Bacteria 5237
77 Ga0436365_1793529 3300039437 Bacteria 27914
78 Ga0436360_0140650 3300039438 Bacteria 2130
79 Ga0436360_0619118 3300039438 Bacteria 1534
80 Ga0436363_1028783 3300039450 Bacteria 2645
81 Ga0436363_1530268 3300039450 Bacteria 33359
82 Ga0436362_0434815 3300039453 Bacteria 10837
83 Ga0436362_0566859 3300039453 Bacteria 6611
84 Ga0436362_0876437 3300039453 Bacteria 8549
85 Ga0451807_2188011 3300041486 Bacteria 1137
86 Ga0451833_0491047 3300041491 Bacteria 1393
87 Ga0466972_0000149 3300044658 Bacteria 56799
88 Ga0466972_0000964 3300044658 Bacteria 13830
89 Ga0466966_0001034 3300044684 Bacteria 17813
90 Ga0466961_0000009 3300044693 Bacteria 139001
91 Ga0466963_0096488 3300044694 Bacteria 2019
92 Ga0466963_0208569 3300044694 Bacteria 1367
93 Ga0466968_0001019 3300044735 Bacteria 9874
94 Ga0466968_0025060 3300044735 Bacteria 2441
95 Ga0466970_0041406 3300044765 Bacteria 2448
96 Ga0466960_0000702 3300044901 Bacteria 11669
97 Ga0466960_0055032 3300044901 Bacteria 1934
98 Ga0466959_0002728 3300045049 Bacteria 11359
99 Ga0466958_0145244 3300045836 Bacteria 1495
100 Ga0495590_0000721 3300046457 Bacteria 15128
101 Ga0495590_0005012 3300046457 Bacteria 5281
102 Ga0495638_0001239 3300046460 Bacteria 24050
103 Ga0495605_0022620 3300046474 Bacteria 3317
104 Ga0495584_0005454 3300046491 Bacteria 6740
105 Ga0495606_0001733 3300046507 Bacteria 28021
106 Ga0495606_0020074 3300046507 Bacteria 4941
107 Ga0495606_0045595 3300046507 Bacteria 2904
108 Ga0495606_0061844 3300046507 Bacteria 2393
109 Ga0495606_0081910 3300046507 Bacteria 2005
110 Ga0495606_0089172 3300046507 Bacteria 1900
111 Ga0495610_0024221 3300046512 Bacteria 3280
112 Ga0495631_0015734 3300046518 Bacteria 3617
113 Ga0495631_0104023 3300046518 Bacteria 1222
114 Ga0495632_0000379 3300046519 Bacteria 42470
115 Ga0495632_0006239 3300046519 Bacteria 7707
116 Ga0495643_0001666 3300046522 Bacteria 19506
117 Ga0495643_0068840 3300046522 Bacteria 1862
118 Ga0495648_0008558 3300046524 Bacteria 8036
119 Ga0495663_0045464 3300046525 Bacteria 1346
120 Ga0495597_0024857 3300046542 Bacteria 2762
121 Ga0495668_0001340 3300046616 Bacteria 24198
122 Ga0495668_0015598 3300046616 Bacteria 4432
123 Ga0495625_0000382 3300046660 Bacteria 67633
124 Ga0495625_0009876 3300046660 Bacteria 7938
125 Ga0495669_0027642 3300046684 Bacteria 2482
126 Ga0495649_0000693 3300046694 Bacteria 27497
127 Ga0495649_0004054 3300046694 Bacteria 9646
128 Ga0495589_0048388 3300046794 Bacteria 2105
129 Ga0495676_0139777 3300047321 Bacteria 1737
130 Ga0495673_0005011 3300047469 Bacteria 8130
131 Ga0495686_0030177 3300047472 Bacteria 3523
132 Ga0496102_0220139 3300048905 Bacteria 1789
133 Ga0496104_0329609 3300048907 Bacteria 1440
134 Ga0496104_0331137 3300048907 Bacteria 1436
135 Ga0496105_0001369 3300048908 Bacteria 17160
136 Ga0496106_0037715 3300048909 Bacteria 3616
137 Ga0496110_0252915 3300048913 Bacteria 1604
138 Ga0496111_0004447 3300048914 Bacteria 8862
139 Ga0496111_0181641 3300048914 Bacteria 1564
140 Ga0496112_0005910 3300048915 Bacteria 10672
141 Ga0496112_0112097 3300048915 Bacteria 2697
142 Ga0496112_0115143 3300048915 Bacteria 2659
143 Ga0496115_0009306 3300048918 Bacteria 7300
144 Ga0496124_0037211 3300048927 Bacteria 4235
145 Ga0496125_0072353 3300048928 Bacteria 2686
146 Ga0501037_0017668 3300049573 Bacteria 5250
147 Ga0501042_0189525 3300049578 Bacteria 1483
148 Ga0501046_0064629 3300049580 Bacteria 2856
149 Ga0501048_0076300 3300049582 Bacteria 2365
150 Ga0501067_0015415 3300049583 Bacteria 4231
151 Ga0501071_0038167 3300049587 Bacteria 3432
152 Ga0501076_0145188 3300049592 Bacteria 1929
153 Ga0501077_0127526 3300049593 Bacteria 1613
154 Ga0501079_0036857 3300049741 Bacteria 3767
155 Ga0501081_0131714 3300049743 Bacteria 1787
156 Ga0501044_0029735 3300049823 Bacteria 5760
157 Ga0501044_0160578 3300049823 Bacteria 2224
158 nmdc:mga07m45_36926_c1 3300050496 Bacteria 2723
159 nmdc:mga08y16_37710_c1 3300050511 Bacteria 5073
160 nmdc:mga0n895_2275_c1 3300050512 Bacteria 14895
161 nmdc:mga0n895_31584_c1 3300050512 Bacteria 5072
162 Ga0500562_003108 3300053108 Bacteria 4145
163 Ga0500658_0028577 3300053134 Bacteria 2165
164 Ga0500616_0000036 3300053153 Bacteria 390769
165 Ga0501084_0020175 3300054114 Bacteria 5556
166 Ga0587072_019561 3300059643 Bacteria 1186
167 Ga0587076_015330 3300059645 Bacteria 1193
168 Ga0587107_003715 3300059652 Bacteria 1501
169 Ga0501082_0120114 3300060353 Bacteria 2278

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300006028 Ga0070717_10180664 Ga0070717_101806642 305
2 3300041486 Ga0451807_2188011 Ga0451807_2188011_166_1107 313
3 iso_pu_bacteria 2857524615 2857529576 314
4 3300046518 Ga0495631_0104023 Ga0495631_0104023_206_1156 316
5 iso_pu_bacteria 2838122688 2838122751 321
6 iso_pu_bacteria 2841983080 2841988818 321
7 3300048915 Ga0496112_0115143 Ga0496112_0115143_13_1005 330
8 3300039438 Ga0436360_0619118 Ga0436360_0619118_337_1344 334
9 3300046507 Ga0495606_0081910 Ga0495606_0081910_691_1698 335
10 3300045836 Ga0466958_0145244 Ga0466958_0145244_450_1460 336
11 3300035691 Ga0373931_0056645 Ga0373931_0056645_1057_2091 338
12 3300049578 Ga0501042_0189525 Ga0501042_0189525_425_1456 342
13 3300049587 Ga0501071_0038167 Ga0501071_0038167_243_1274 342
14 3300037853 Ga0436364_0941071 Ga0436364_0941071_2739_3839 345
15 3300041491 Ga0451833_0491047 Ga0451833_0491047_326_1369 347
16 3300021377 Ga0213874_10007475 Ga0213874_100074752 353
17 3300039450 Ga0436363_1028783 Ga0436363_1028783_572_1633 353
18 3300014497 Ga0182008_10019471 Ga0182008_100194714 357
19 3300059643 Ga0587072_019561 Ga0587072_019561_47_1123 357
20 3300059645 Ga0587076_015330 Ga0587076_015330_48_1124 357
21 3300059652 Ga0587107_003715 Ga0587107_003715_313_1389 357
22 3300031901 Ga0307406_10014801 Ga0307406_100148013 358
23 3300031911 Ga0307412_10051838 Ga0307412_100518383 358
24 3300031995 Ga0307409_100000247 Ga0307409_10000024712 358
25 3300032002 Ga0307416_100001545 Ga0307416_1000015453 358
26 3300032004 Ga0307414_10082702 Ga0307414_100827023 358
27 3300032126 Ga0307415_100000248 Ga0307415_1000002487 358
28 3300032126 Ga0307415_100021208 Ga0307415_1000212084 358
29 3300046507 Ga0495606_0020074 Ga0495606_0020074_2996_4072 358
30 3300049583 Ga0501067_0015415 Ga0501067_0015415_2726_3802 358
31 iso_pu_bacteria 643348564 643598711 358
32 3300048913 Ga0496110_0252915 Ga0496110_0252915_70_1149 359
33 3300039437 Ga0436365_0346567 Ga0436365_0346567_279_1361 360
34 3300049580 Ga0501046_0064629 Ga0501046_0064629_1269_2372 361
35 3300049823 Ga0501044_0029735 Ga0501044_0029735_2607_3710 361
36 3300037418 Ga0395900_0008798 Ga0395900_0008798_7456_8544 362
37 3300038443 Ga0395901_0025614 Ga0395901_0025614_2220_3308 362
38 iso_pu_bacteria 2508501128 2509152026 362
39 iso_pu_bacteria 2824704595 2824706016 362
40 iso_pu_bacteria 2824753945 2824758876 362
41 iso_pu_bacteria 2824763712 2824769347 362
42 iso_pu_bacteria 2879099564 2879102423 362
43 iso_pu_bacteria 2904711408 2904720140 362
44 iso_pu_bacteria 2932784394 2932792257 362
45 iso_pu_bacteria 2932818245 2932826362 362
46 iso_pu_bacteria 2932828146 2932836408 362
47 iso_pu_bacteria 2935703347 2935711207 362
48 iso_pu_bacteria 8016511872 8016512602 362
49 iso_pu_bacteria 8017057580 8017067123 362
50 iso_pu_bacteria 8019576017 8019586078 362
51 iso_pu_bacteria 8019597564 8019607772 362
52 3300037466 Ga0395898_0343728 Ga0395898_0343728_156_1247 363
53 iso_pu_bacteria 2507262055 2507510791 363
54 iso_pu_bacteria 2508501009 2508544590 363
55 iso_pu_bacteria 2508501042 2508693959 363
56 iso_pu_bacteria 2513237092 2513622659 363
57 iso_pu_bacteria 2513237161 2514017328 363
58 iso_pu_bacteria 2515154112 2515628054 363
59 iso_pu_bacteria 2617270735 2617351222 363
60 iso_pu_bacteria 2617270741 2617378493 363
61 iso_pu_bacteria 2824679649 2824680371 363
62 iso_pu_bacteria 2824732956 2824737886 363
63 iso_pu_bacteria 2824746037 2824748447 363
64 iso_pu_bacteria 2841941048 2841946211 363
65 iso_pu_bacteria 2841949485 2841950993 363
66 iso_pu_bacteria 2841966195 2841973396 363
67 iso_pu_bacteria 2841974524 2841982516 363
68 iso_pu_bacteria 2874590934 2874592464 363
69 iso_pu_bacteria 2874645413 2874650147 363
70 iso_pu_bacteria 2876771140 2876775326 363
71 iso_pu_bacteria 2876818435 2876826321 363
72 iso_pu_bacteria 2879074833 2879079586 363
73 iso_pu_bacteria 2879127579 2879129275 363
74 iso_pu_bacteria 2879142872 2879144917 363
75 iso_pu_bacteria 2881364244 2881368213 363
76 iso_pu_bacteria 2881665667 2881667716 363
77 iso_pu_bacteria 2908775508 2908780736 363
78 iso_pu_bacteria 2922393267 2922397499 363
79 iso_pu_bacteria 2935608549 2935612427 363
80 iso_pu_bacteria 2935648319 2935650261 363
81 iso_pu_bacteria 2935656913 2935658408 363
82 iso_pu_bacteria 2935769743 2935775327 363
83 iso_pu_bacteria 2935777560 2935779471 363
84 iso_pu_bacteria 2935785616 2935791475 363
85 iso_pu_bacteria 2935793552 2935799787 363
86 iso_pu_bacteria 2935819856 2935823916 363
87 iso_pu_bacteria 2935847175 2935852937 363
88 iso_pu_bacteria 2935908558 2935913395 363
89 iso_pu_bacteria 2935916978 2935923292 363
90 iso_pu_bacteria 2935926038 2935931288 363
91 iso_pu_bacteria 2935934488 2935935570 363
92 iso_pu_bacteria 2935942939 2935947136 363
93 iso_pu_bacteria 2935951376 2935953769 363
94 iso_pu_bacteria 2935967501 2935968795 363
95 iso_pu_bacteria 2935975950 2935979459 363
96 iso_pu_bacteria 2935984226 2935985971 363
97 iso_pu_bacteria 2936011229 2936013180 363
98 iso_pu_bacteria 2936019824 2936021733 363
99 iso_pu_bacteria 2936028420 2936030473 363
100 iso_pu_bacteria 2936046547 2936047927 363
101 iso_pu_bacteria 2936055302 2936057928 363
102 iso_pu_bacteria 3005483717 3005485131 363
103 iso_pu_bacteria 3005587118 3005587457 363
104 iso_pu_bacteria 8016522445 8016530851 363
105 iso_pu_bacteria 8016530956 8016536143 363
106 iso_pu_bacteria 8016548790 8016552813 363
107 iso_pu_bacteria 8016557553 8016561192 363
108 iso_pu_bacteria 8016575299 8016578587 363
109 iso_pu_bacteria 8016595262 8016599050 363
110 iso_pu_bacteria 8016603502 8016612005 363
111 iso_pu_bacteria 8016613128 8016621799 363
112 iso_pu_bacteria 8016622563 8016628049 363
113 iso_pu_bacteria 8016630954 8016637727 363
114 iso_pu_bacteria 8019619141 8019625548 363
115 iso_pu_bacteria 8019629233 8019636737 363
116 iso_pu_bacteria 8019638758 8019642884 363
117 iso_pu_bacteria 8019659431 8019664543 363
118 iso_pu_bacteria 8019668869 8019674128 363
119 iso_pu_bacteria 8019687851 8019694474 363
120 iso_pu_bacteria 8056681323 8056682776 363
121 iso_pu_bacteria 8056689827 8056693249 363
122 3300005336 Ga0070680_100014958 Ga0070680_1000149585 364
123 3300005530 Ga0070679_100068143 Ga0070679_1000681434 364
124 3300006871 Ga0075434_100000641 Ga0075434_10000064125 364
125 3300009094 Ga0111539_10016657 Ga0111539_100166577 364
126 3300025917 Ga0207660_10029832 Ga0207660_100298324 364
127 3300044694 Ga0466963_0208569 Ga0466963_0208569_85_1179 364
128 3300050511 nmdc:mga08y16_37710_c1 nmdc:mga08y16_37710_c1_3807_4916 364
129 3300050512 nmdc:mga0n895_2275_c1 nmdc:mga0n895_2275_c1_3070_4179 364
130 3300005336 Ga0070680_100000072 Ga0070680_10000007230 365
131 3300005434 Ga0070709_10212339 Ga0070709_102123391 365
132 3300005435 Ga0070714_100149695 Ga0070714_1001496952 365
133 3300013307 Ga0157372_10024259 Ga0157372_100242594 365
134 3300014325 Ga0163163_10006147 Ga0163163_100061479 365
135 3300025917 Ga0207660_10001424 Ga0207660_100014248 365
136 3300047321 Ga0495676_0139777 Ga0495676_0139777_516_1616 365
137 3300048907 Ga0496104_0329609 Ga0496104_0329609_316_1413 365
138 3300048908 Ga0496105_0001369 Ga0496105_0001369_11310_12410 365
139 3300048914 Ga0496111_0004447 Ga0496111_0004447_3547_4647 365
140 3300048915 Ga0496112_0005910 Ga0496112_0005910_4957_6057 365
141 3300048918 Ga0496115_0009306 Ga0496115_0009306_4704_5804 365
142 3300005339 Ga0070660_100062091 Ga0070660_1000620912 366
143 3300005563 Ga0068855_100007273 Ga0068855_1000072738 366
144 3300005614 Ga0068856_100187907 Ga0068856_1001879072 366
145 3300005616 Ga0068852_100007038 Ga0068852_1000070383 366
146 3300005617 Ga0068859_100095783 Ga0068859_1000957833 366
147 3300006871 Ga0075434_100135098 Ga0075434_1001350982 366
148 3300006931 Ga0097620_100095780 Ga0097620_1000957803 366
149 3300013307 Ga0157372_10335902 Ga0157372_103359022 366
150 3300021384 Ga0213876_10000616 Ga0213876_1000061621 366
151 3300021384 Ga0213876_10001363 Ga0213876_1000136314 366
152 3300021388 Ga0213875_10017297 Ga0213875_100172973 366
153 3300031249 Ga0265339_10006604 Ga0265339_100066044 366
154 3300031824 Ga0307413_10042496 Ga0307413_100424962 366
155 3300037853 Ga0436364_0279818 Ga0436364_0279818_541_1650 366
156 3300039437 Ga0436365_0100037 Ga0436365_0100037_2480_3580 366
157 3300039437 Ga0436365_0403425 Ga0436365_0403425_22640_23740 366
158 3300039437 Ga0436365_0641427 Ga0436365_0641427_839_1948 366
159 3300039437 Ga0436365_1793529 Ga0436365_1793529_10402_11511 366
160 3300039450 Ga0436363_1530268 Ga0436363_1530268_17058_18167 366
161 3300039453 Ga0436362_0434815 Ga0436362_0434815_8640_9749 366
162 3300039453 Ga0436362_0876437 Ga0436362_0876437_5440_6540 366
163 3300046507 Ga0495606_0061844 Ga0495606_0061844_68_1168 366
164 3300048905 Ga0496102_0220139 Ga0496102_0220139_561_1679 366
165 3300048907 Ga0496104_0331137 Ga0496104_0331137_75_1193 366
166 3300048909 Ga0496106_0037715 Ga0496106_0037715_1446_2564 366
167 3300048914 Ga0496111_0181641 Ga0496111_0181641_232_1350 366
168 3300048915 Ga0496112_0112097 Ga0496112_0112097_511_1629 366
169 3300048927 Ga0496124_0037211 Ga0496124_0037211_2543_3643 366
170 3300048928 Ga0496125_0072353 Ga0496125_0072353_84_1184 366
171 3300049573 Ga0501037_0017668 Ga0501037_0017668_3493_4593 366
172 3300049582 Ga0501048_0076300 Ga0501048_0076300_993_2096 366
173 3300049592 Ga0501076_0145188 Ga0501076_0145188_108_1211 366
174 3300049593 Ga0501077_0127526 Ga0501077_0127526_213_1316 366
175 3300049741 Ga0501079_0036857 Ga0501079_0036857_2207_3310 366
176 3300049743 Ga0501081_0131714 Ga0501081_0131714_640_1743 366
177 3300049823 Ga0501044_0160578 Ga0501044_0160578_385_1485 366
178 3300050512 nmdc:mga0n895_31584_c1 nmdc:mga0n895_31584_c1_2962_4080 366
179 3300053108 Ga0500562_003108 Ga0500562_003108_560_1660 366
180 3300053153 Ga0500616_0000036 Ga0500616_0000036_100782_101882 366
181 3300054114 Ga0501084_0020175 Ga0501084_0020175_3514_4617 366
182 3300060353 Ga0501082_0120114 Ga0501082_0120114_123_1226 366
183 3300003322 rootL2_10023535 rootL2_100235352 367
184 3300006942 Ga0099824_1022134 Ga0099824_10221345 367
185 3300006944 Ga0099823_1028728 Ga0099823_10287284 367
186 3300013296 Ga0157374_10276028 Ga0157374_102760282 367
187 3300021320 Ga0214544_1000004 Ga0214544_1000004121 367
188 3300021321 Ga0214542_1000001 Ga0214542_1000001232 367
189 3300021324 Ga0214545_1000001 Ga0214545_1000001299 367
190 3300021324 Ga0214545_1019700 Ga0214545_10197003 367
191 3300021327 Ga0214543_1000006 Ga0214543_1000006296 367
192 3300021327 Ga0214543_1025773 Ga0214543_10257733 367
193 3300025261 Ga0209233_1002385 Ga0209233_10023853 367
194 3300025272 Ga0209455_1007281 Ga0209455_10072813 367
195 3300025272 Ga0209455_1011219 Ga0209455_10112193 367
196 3300025297 Ga0209758_1005239 Ga0209758_10052395 367
197 3300026067 Ga0207678_10111389 Ga0207678_101113892 367
198 3300027296 Ga0209389_1000010 Ga0209389_100001031 367
199 3300027296 Ga0209389_1000216 Ga0209389_100021615 367
200 3300027357 Ga0209589_1000016 Ga0209589_1000016183 367
201 3300027361 Ga0209489_100016 Ga0209489_10001631 367
202 3300027361 Ga0209489_102145 Ga0209489_10214515 367
203 3300031995 Ga0307409_100044944 Ga0307409_1000449442 367
204 3300032002 Ga0307416_100159994 Ga0307416_1001599943 367
205 3300032126 Ga0307415_100070182 Ga0307415_1000701823 367
206 3300032126 Ga0307415_100098145 Ga0307415_1000981452 367
207 3300037418 Ga0395900_0000394 Ga0395900_0000394_31790_32893 367
208 3300037466 Ga0395898_0006497 Ga0395898_0006497_11169_12272 367
209 3300037466 Ga0395898_0011909 Ga0395898_0011909_4209_5315 367
210 3300037466 Ga0395898_0141039 Ga0395898_0141039_644_1747 367
211 3300037471 Ga0395905_0092141 Ga0395905_0092141_1490_2593 367
212 3300038443 Ga0395901_0175344 Ga0395901_0175344_785_1891 367
213 3300038443 Ga0395901_0195271 Ga0395901_0195271_723_1826 367
214 3300039437 Ga0436365_1364825 Ga0436365_1364825_3553_4656 367
215 3300039438 Ga0436360_0140650 Ga0436360_0140650_707_1834 367
216 3300039453 Ga0436362_0566859 Ga0436362_0566859_467_1594 367
217 3300044658 Ga0466972_0000149 Ga0466972_0000149_1587_2690 367
218 3300044658 Ga0466972_0000964 Ga0466972_0000964_815_1918 367
219 3300044684 Ga0466966_0001034 Ga0466966_0001034_8545_9648 367
220 3300044693 Ga0466961_0000009 Ga0466961_0000009_82023_83126 367
221 3300044694 Ga0466963_0096488 Ga0466963_0096488_607_1710 367
222 3300044735 Ga0466968_0001019 Ga0466968_0001019_5626_6729 367
223 3300044735 Ga0466968_0025060 Ga0466968_0025060_257_1360 367
224 3300044765 Ga0466970_0041406 Ga0466970_0041406_1229_2332 367
225 3300044901 Ga0466960_0000702 Ga0466960_0000702_2254_3357 367
226 3300044901 Ga0466960_0055032 Ga0466960_0055032_57_1160 367
227 3300045049 Ga0466959_0002728 Ga0466959_0002728_4677_5780 367
228 3300046457 Ga0495590_0000721 Ga0495590_0000721_10408_11511 367
229 3300046457 Ga0495590_0005012 Ga0495590_0005012_1159_2262 367
230 3300046460 Ga0495638_0001239 Ga0495638_0001239_9998_11101 367
231 3300046474 Ga0495605_0022620 Ga0495605_0022620_533_1636 367
232 3300046491 Ga0495584_0005454 Ga0495584_0005454_3496_4599 367
233 3300046507 Ga0495606_0001733 Ga0495606_0001733_14618_15721 367
234 3300046507 Ga0495606_0045595 Ga0495606_0045595_136_1239 367
235 3300046507 Ga0495606_0089172 Ga0495606_0089172_187_1290 367
236 3300046512 Ga0495610_0024221 Ga0495610_0024221_24_1127 367
237 3300046518 Ga0495631_0015734 Ga0495631_0015734_557_1660 367
238 3300046519 Ga0495632_0000379 Ga0495632_0000379_18378_19481 367
239 3300046519 Ga0495632_0006239 Ga0495632_0006239_6116_7219 367
240 3300046522 Ga0495643_0001666 Ga0495643_0001666_10342_11445 367
241 3300046522 Ga0495643_0068840 Ga0495643_0068840_513_1616 367
242 3300046524 Ga0495648_0008558 Ga0495648_0008558_3241_4344 367
243 3300046525 Ga0495663_0045464 Ga0495663_0045464_220_1323 367
244 3300046542 Ga0495597_0024857 Ga0495597_0024857_620_1723 367
245 3300046616 Ga0495668_0001340 Ga0495668_0001340_5736_6839 367
246 3300046616 Ga0495668_0015598 Ga0495668_0015598_2589_3692 367
247 3300046660 Ga0495625_0000382 Ga0495625_0000382_48341_49444 367
248 3300046660 Ga0495625_0009876 Ga0495625_0009876_285_1388 367
249 3300046684 Ga0495669_0027642 Ga0495669_0027642_115_1218 367
250 3300046694 Ga0495649_0000693 Ga0495649_0000693_13445_14548 367
251 3300046694 Ga0495649_0004054 Ga0495649_0004054_5989_7092 367
252 3300046794 Ga0495589_0048388 Ga0495589_0048388_634_1737 367
253 3300047469 Ga0495673_0005011 Ga0495673_0005011_6711_7814 367
254 3300047472 Ga0495686_0030177 Ga0495686_0030177_1647_2750 367
255 3300050496 nmdc:mga07m45_36926_c1 nmdc:mga07m45_36926_c1_378_1481 367
256 3300053134 Ga0500658_0028577 Ga0500658_0028577_601_1704 367

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13524

Glyco_trans_1_2

Glycosyl transferases group 1

207

358

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3mbo-assembly3.cif.gz_E crystal structure of the glycosyltransferase babsha bound with udp and l-malate 0.7632 1 354
3mbo-assembly1.cif.gz_A crystal structure of the glycosyltransferase babsha bound with udp and l-malate 0.7591 1 356
2jjm-assembly1.cif.gz_B crystal structure of a family gt4 glycosyltransferase from bacillus anthracis orf ba1558. 0.7399 1 354
2f9f-assembly1.cif.gz_A crystal structure of the putative mannosyl transferase (wbaz-1)from archaeoglobus fulgidus, northeast structural genomics target gr29a. 0.7376 170 337
3mbo-assembly2.cif.gz_C crystal structure of the glycosyltransferase babsha bound with udp and l-malate 0.7367 1 354
ID Description Score Start End Superfamily
af_Q2G1K0_190_352_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8116 188 334 3.40.50.2000
af_K7M3G4_291_448_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.788 185 331 3.40.50.2000
af_A0A1D6NHE4_303_487_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7826 180 350 3.40.50.2000
af_A4FUP9_153_322_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7792 178 335 3.40.50.2000
af_P96407_190_356_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.762 178 334 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A1L6L1S8-F1-model_v4 deleted 0.9853 1 352
AF-Q2IPB8-F1-model_v4 Spore protein YkvP/CgeB glycosyl transferase-like domain-containing protein 0.9821 1 357
AF-A0A527GIT7-F1-model_v4 Glycosyltransferase 0.9816 197 290 GO:0016740
AF-A0A530QPJ7-F1-model_v4 Glycosyltransferase 0.9804 62 271 GO:0016740
AF-B4UF47-F1-model_v4 Spore protein YkvP/CgeB glycosyl transferase-like domain-containing protein 0.9784 1 357

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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