F365919

General Info

Members Datasets Scaffolds Average Seq Length
255 166 219 521

Family's Representative Sequence

Representative Sequence 3300046453|Ga0495627_012978|Ga0495627_012978_871_2172
Length 433
Sequence LIYALLPIIRNTFTGITGVNPTVIEAAKAMGMNRKQLLFKVELPLAMPVIIAGIRTAAVINVGVATLASFVAAGGLGEFIFGGISLNNTNMILAGAIPAALLAILLDQMIAVLQKSGYRFLKKLKYIIPAVLVVFGIVYLMTSISDHNNKLKAGFTPEFMGRQDGDLGLRSVYGLNVNPKVVNDAVMYKAVFEGELDLISGYSTDGRIKAFDLYVLEDDKKIFPPYFAAPIIKTKTLEKFPELEETLNLLAGKFNDSIMTDLNYRSDYLNQTPEKIANDFLIKTKLYKVSRNGNSGTIRIGSKIFGEQYILTEIYKKLIEGYTDYKVETKTGLGGTKICFDALMNDAIDFYPEYTGTGLLVLLKPSEKTIKAVSQSPDKTYKFVDFEFRKKYGIQWLEPLGFNNSYALMMRKKQADELKIKSISDLKNYLDSK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
3 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
4 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
5 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
6 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
7 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
8 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
9 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
10 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
11 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
12 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
13 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
14 2738541283 Pedobacter sp. OK701 Isolate Unclassified
15 2738543023 Pedobacter sp. OK628 Isolate Unclassified
16 2739367656 Pedobacter sp. CF523 Isolate Unclassified
17 2739367663 Pedobacter sp. YR510 Isolate Unclassified
18 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
19 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
20 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
21 2818991444 Filimonas endophytica 3197 Isolate Unclassified
22 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
23 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
24 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
25 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
26 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
27 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
28 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
29 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
30 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
31 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
32 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
33 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
34 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
35 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
36 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
37 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
38 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
39 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
40 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
41 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
42 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
43 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
44 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
45 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
46 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
47 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
48 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
49 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
50 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
51 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
52 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
53 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
54 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
55 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
56 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
57 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
58 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
59 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
60 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
61 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
62 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
63 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
64 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
65 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
66 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
67 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
68 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
69 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
70 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
71 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
72 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
73 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
74 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
75 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
76 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
77 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
78 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
79 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
80 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
81 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
82 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
83 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
84 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
85 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
86 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
87 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
88 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
89 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
90 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
91 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
92 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
114 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
115 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
116 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
117 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
118 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
119 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
125 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
126 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
127 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
128 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
129 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
130 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
131 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
132 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
133 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
134 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
135 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
136 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
137 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
138 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
139 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
140 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
141 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
142 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
143 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
144 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
145 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
146 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
147 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
148 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
149 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
150 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
151 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
152 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
153 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
154 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
157 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
158 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
159 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
164 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
165 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
166 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.88
Metatranscriptomes 0
Isolates 14.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.71
Nodule 0
Rhizoplane 0.39
Rhizosphere 78.43
Stem 0
Stem Tuber 0
Unclassified 16.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3295531 2162886007 Bacteria 2169
2 JGI24737J22298_10000896 3300001990 Bacteria 10597
3 JGI24735J21928_10000020 3300002067 Bacteria 108706
4 JGI24744J21845_10002589 3300002077 Bacteria 3694
5 JGI25154J39366_1000042 3300002738 Bacteria 143170
6 JGI25165J46597_1004156 3300003214 Bacteria 3214
7 rootH1_10053482 3300003316 Bacteria 4026
8 rootH1_10089409 3300003316 Bacteria 6630
9 rootL2_10124802 3300003322 Bacteria 2795
10 rootH1_10006030 3300003323 Bacteria 45513
11 rootH1_10081784 3300003323 Bacteria 6224
12 rootH1_10160490 3300003323 Bacteria 2536
13 Ga0065714_10064764 3300005288 Bacteria 19607
14 Ga0070658_10000340 3300005327 Bacteria 40349
15 Ga0070676_10000474 3300005328 Bacteria 19238
16 Ga0070680_100004607 3300005336 Bacteria 10361
17 Ga0070682_100000130 3300005337 Bacteria 63249
18 Ga0068868_100022294 3300005338 Bacteria 4777
19 Ga0070660_100009269 3300005339 Bacteria 6918
20 Ga0070668_100101687 3300005347 Bacteria 2278
21 Ga0070671_100011572 3300005355 Bacteria 7097
22 Ga0070659_100004657 3300005366 Bacteria 9797
23 Ga0070659_100033212 3300005366 Bacteria 4006
24 Ga0070678_100003672 3300005456 Bacteria 8577
25 Ga0070662_100000046 3300005457 Bacteria 67592
26 Ga0070681_10008517 3300005458 Bacteria 10041
27 Ga0068867_100001280 3300005459 Bacteria 17355
28 Ga0070679_100008384 3300005530 Bacteria 9725
29 Ga0070679_100071681 3300005530 Bacteria 3456
30 Ga0070672_100200127 3300005543 Bacteria 1670
31 Ga0068855_100000121 3300005563 Bacteria 98009
32 Ga0068855_100000229 3300005563 Bacteria 71835
33 Ga0068855_100073759 3300005563 Bacteria 3964
34 Ga0068855_100096191 3300005563 Bacteria 3413
35 Ga0068854_100048519 3300005578 Bacteria 3030
36 Ga0068856_100000399 3300005614 Bacteria 47601
37 Ga0068852_100013027 3300005616 Bacteria 6347
38 Ga0075366_10000117 3300006195 Bacteria 32747
39 Ga0097621_100002108 3300006237 Bacteria 13634
40 Ga0068871_100002497 3300006358 Bacteria 12550
41 Ga0068865_100000025 3300006881 Bacteria 94590
42 Ga0105240_10035160 3300009093 Bacteria 6459
43 Ga0105240_10045817 3300009093 Bacteria 5546
44 Ga0105240_10116666 3300009093 Bacteria 3220
45 Ga0105240_10260110 3300009093 Bacteria 2002
46 Ga0105243_10000432 3300009148 Bacteria 43867
47 Ga0105241_10017654 3300009174 Bacteria 5247
48 Ga0105237_10000146 3300009545 Bacteria 99601
49 Ga0105237_10003965 3300009545 Bacteria 17322
50 Ga0105237_10008328 3300009545 Bacteria 11252
51 Ga0105237_10011333 3300009545 Bacteria 9432
52 Ga0105237_10033873 3300009545 Bacteria 5175
53 Ga0105238_10004370 3300009551 Bacteria 14022
54 Ga0105238_10036984 3300009551 Bacteria 4963
55 Ga0105239_10000053 3300010375 Bacteria 163705
56 Ga0105239_10000068 3300010375 Bacteria 144666
57 Ga0105239_10000712 3300010375 Bacteria 47187
58 Ga0105239_10001575 3300010375 Bacteria 30140
59 Ga0105239_10003355 3300010375 Bacteria 19676
60 Ga0105239_10004327 3300010375 Bacteria 17015
61 Ga0157373_10001175 3300013100 Bacteria 20027
62 Ga0157373_10038850 3300013100 Unclassified 3410
63 Ga0157371_10000476 3300013102 Bacteria 49123
64 Ga0157370_10000132 3300013104 Bacteria 89678
65 Ga0157370_10000195 3300013104 Bacteria 76072
66 Ga0157370_10003789 3300013104 Bacteria 17648
67 Ga0157370_10022266 3300013104 Bacteria 6306
68 Ga0157369_10000403 3300013105 Bacteria 57592
69 Ga0157369_10018740 3300013105 Bacteria 7759
70 Ga0157369_10081138 3300013105 Bacteria 3472
71 Ga0157369_10139572 3300013105 Bacteria 2565
72 Ga0157374_10000147 3300013296 Bacteria 63762
73 Ga0157374_10014713 3300013296 Bacteria 6851
74 Ga0157378_10075822 3300013297 Bacteria 3029
75 Ga0163162_10000044 3300013306 Bacteria 128200
76 Ga0157372_10000398 3300013307 Bacteria 47920
77 Ga0157372_10002608 3300013307 Bacteria 19498
78 Ga0157372_10006526 3300013307 Bacteria 12417
79 Ga0157372_10020419 3300013307 Bacteria 7146
80 Ga0157372_10024809 3300013307 Bacteria 6516
81 Ga0157375_10000204 3300013308 Bacteria 55063
82 Ga0157375_10003196 3300013308 Bacteria 14219
83 Ga0182008_10005667 3300014497 Bacteria 7073
84 Ga0182006_1000016 3300015261 Bacteria 303558
85 Ga0182006_1000521 3300015261 Bacteria 29292
86 Ga0163161_10000705 3300017792 Bacteria 26566
87 Ga0163161_10017510 3300017792 Bacteria 5014
88 Ga0163161_10054771 3300017792 Bacteria 2895
89 Ga0207427_100043 3300025231 Bacteria 249595
90 Ga0209437_100030 3300025233 Bacteria 532466
91 Ga0209437_100170 3300025233 Bacteria 142489
92 Ga0209026_1002480 3300025250 Bacteria 6867
93 Ga0209233_1000349 3300025261 Bacteria 43702
94 Ga0209233_1000511 3300025261 Bacteria 22998
95 Ga0209233_1003484 3300025261 Bacteria 5533
96 Ga0207655_1000013 3300025728 Bacteria 637510
97 Ga0207647_10000027 3300025904 Bacteria 109872
98 Ga0207647_10000289 3300025904 Bacteria 41295
99 Ga0207647_10053531 3300025904 Bacteria 2486
100 Ga0207645_10000300 3300025907 Bacteria 41495
101 Ga0207705_10000111 3300025909 Bacteria 92842
102 Ga0207707_10001685 3300025912 Bacteria 20338
103 Ga0207695_10000179 3300025913 Bacteria 185564
104 Ga0207695_10007613 3300025913 Bacteria 13724
105 Ga0207695_10013006 3300025913 Bacteria 9942
106 Ga0207695_10014091 3300025913 Bacteria 9494
107 Ga0207695_10025919 3300025913 Bacteria 6552
108 Ga0207671_10000025 3300025914 Bacteria 271617
109 Ga0207671_10000112 3300025914 Bacteria 125310
110 Ga0207671_10000478 3300025914 Bacteria 54326
111 Ga0207671_10000634 3300025914 Bacteria 46044
112 Ga0207671_10009305 3300025914 Bacteria 8225
113 Ga0207671_10033215 3300025914 Bacteria 3839
114 Ga0207660_10020554 3300025917 Bacteria 4432
115 Ga0207657_10012609 3300025919 Bacteria 8332
116 Ga0207652_10003689 3300025921 Bacteria 12586
117 Ga0207652_10053891 3300025921 Bacteria 3456
118 Ga0207694_10023256 3300025924 Bacteria 4706
119 Ga0207694_10028317 3300025924 Bacteria 4271
120 Ga0207690_10005729 3300025932 Bacteria 7339
121 Ga0207706_10000010 3300025933 Bacteria 200039
122 Ga0207686_10050001 3300025934 Bacteria 2598
123 Ga0207709_10000445 3300025935 Bacteria 38848
124 Ga0207704_10000016 3300025938 Bacteria 158362
125 Ga0207667_10000030 3300025949 Bacteria 327226
126 Ga0207667_10001876 3300025949 Bacteria 26429
127 Ga0207667_10053750 3300025949 Bacteria 4237
128 Ga0207667_10077172 3300025949 Bacteria 3456
129 Ga0207667_10114645 3300025949 Bacteria 2778
130 Ga0207640_10037348 3300025981 Bacteria 3055
131 Ga0207677_10065763 3300026023 Bacteria 2531
132 Ga0207702_10001826 3300026078 Bacteria 20957
133 Ga0207648_10003384 3300026089 Bacteria 16755
134 Ga0307515_10000299 3300028794 Bacteria 122087
135 Ga0307515_10000712 3300028794 Bacteria 76634
136 Ga0307412_10000022 3300031911 Bacteria 241533
137 Ga0307412_10001764 3300031911 Bacteria 11953
138 Ga0307416_100000092 3300032002 Bacteria 61018
139 Ga0307414_10098414 3300032004 Bacteria 2194
140 Ga0307507_10000078 3300033179 Bacteria 151026
141 Ga0307510_10003306 3300033180 Bacteria 18769
142 Ga0395899_0000011 3300037312 Bacteria 521331
143 Ga0395899_0000269 3300037312 Bacteria 68033
144 Ga0395900_0000251 3300037418 Bacteria 83846
145 Ga0395898_0029414 3300037466 Bacteria 5503
146 Ga0395905_0000495 3300037471 Bacteria 54122
147 Ga0395901_0000145 3300038443 Bacteria 91739
148 Ga0395901_0054025 3300038443 Bacteria 4175
149 Ga0439445_0000016 3300042004 Bacteria 22554
150 Ga0495627_000002 3300046453 Bacteria 903861
151 Ga0495627_012978 3300046453 Bacteria 2941
152 Ga0495627_019487 3300046453 Bacteria 2274
153 Ga0495590_0004042 3300046457 Bacteria 5953
154 Ga0495651_0126909 3300046462 Bacteria 1868
155 Ga0495650_0000808 3300046471 Bacteria 38180
156 Ga0495585_0000029 3300046492 Bacteria 145822
157 Ga0495585_0000092 3300046492 Bacteria 94819
158 Ga0495596_0000182 3300046500 Bacteria 43822
159 Ga0495606_0000021 3300046507 Bacteria 271238
160 Ga0495606_0004223 3300046507 Bacteria 14543
161 Ga0495606_0011052 3300046507 Bacteria 7408
162 Ga0495606_0045560 3300046507 Bacteria 2905
163 Ga0495610_0000347 3300046512 Bacteria 48803
164 Ga0495616_0001094 3300046513 Bacteria 19271
165 Ga0495616_0003779 3300046513 Bacteria 9656
166 Ga0495632_0001026 3300046519 Bacteria 24147
167 Ga0495632_0069341 3300046519 Bacteria 1698
168 Ga0495637_0039069 3300046520 Bacteria 2051
169 Ga0495648_0030770 3300046524 Bacteria 3544
170 Ga0495663_0003471 3300046525 Bacteria 4541
171 Ga0495652_0082551 3300046529 Bacteria 2648
172 Ga0495654_0000001 3300046530 Bacteria 1513197
173 Ga0495609_0000025 3300046538 Bacteria 256898
174 Ga0495609_0029360 3300046538 Bacteria 2504
175 Ga0495633_0000004 3300046558 Bacteria 370781
176 Ga0495633_0002349 3300046558 Bacteria 13408
177 Ga0495633_0019473 3300046558 Bacteria 3431
178 Ga0495668_0000058 3300046616 Bacteria 195501
179 Ga0495625_0000310 3300046660 Bacteria 74325
180 Ga0495625_0000314 3300046660 Bacteria 74102
181 Ga0495625_0000649 3300046660 Bacteria 49932
182 Ga0495625_0008165 3300046660 Bacteria 8968
183 Ga0495625_0024163 3300046660 Bacteria 4630
184 Ga0495661_0002548 3300046665 Bacteria 13977
185 Ga0495649_0000007 3300046694 Bacteria 518037
186 Ga0495687_000385 3300047443 Bacteria 54684
187 Ga0495687_009465 3300047443 Bacteria 5441
188 Ga0495686_0000965 3300047472 Bacteria 35434
189 Ga0495686_0003620 3300047472 Bacteria 13251
190 Ga0495686_0005141 3300047472 Bacteria 10441
191 Ga0495686_0009725 3300047472 Bacteria 6903
192 Ga0495686_0019593 3300047472 Bacteria 4521
193 Ga0495614_0009962 3300048089 Bacteria 4195
194 Ga0496116_0000006 3300048919 Bacteria 811937
195 Ga0496117_0000023 3300048920 Bacteria 438585
196 Ga0496118_0000660 3300048921 Bacteria 56444
197 Ga0496119_0000010 3300048922 Bacteria 438534
198 Ga0496122_0000066 3300048925 Bacteria 231473
199 Ga0496122_0000166 3300048925 Bacteria 157284
200 Ga0496122_0000798 3300048925 Bacteria 60429
201 Ga0496122_0004308 3300048925 Bacteria 17825
202 Ga0496122_0004861 3300048925 Bacteria 16344
203 Ga0496123_0000414 3300048926 Bacteria 77954
204 Ga0496123_0007085 3300048926 Bacteria 10657
205 Ga0496123_0010249 3300048926 Bacteria 8313
206 Ga0496123_0012993 3300048926 Bacteria 7033
207 Ga0496124_0002784 3300048927 Bacteria 22175
208 Ga0496125_0000736 3300048928 Bacteria 54151
209 Ga0496125_0010121 3300048928 Bacteria 9568
210 Ga0496126_0000638 3300048929 Bacteria 65227
211 Ga0495678_002804 3300049459 Bacteria 11326
212 Ga0501043_0111526 3300049579 Bacteria 2147
213 Ga0501047_0092724 3300049581 Bacteria 2899
214 Ga0501035_0025902 3300049822 Bacteria 5374
215 Ga0501044_0069483 3300049823 Bacteria 3585
216 nmdc:mga0k408_49_c2 3300050493 Bacteria 55012
217 Ga0500608_000607 3300053122 Bacteria 13192
218 Ga0500618_000006 3300053125 Bacteria 239188
219 Ga0500624_000262 3300053157 Bacteria 18417

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046453 Ga0495627_012978 Ga0495627_012978_871_2172 431
2 3300049459 Ga0495678_002804 Ga0495678_002804_31_1374 447
3 3300046520 Ga0495637_0039069 Ga0495637_0039069_13_1530 505
4 3300010375 Ga0105239_10004327 Ga0105239_100043278 507
5 3300005530 Ga0070679_100071681 Ga0070679_1000716813 510
6 3300025921 Ga0207652_10053891 Ga0207652_100538912 510
7 3300037312 Ga0395899_0000269 Ga0395899_0000269_22368_23942 511
8 3300037418 Ga0395900_0000251 Ga0395900_0000251_25170_26744 511
9 3300037466 Ga0395898_0029414 Ga0395898_0029414_3712_5286 511
10 3300037471 Ga0395905_0000495 Ga0395905_0000495_25957_27531 511
11 3300038443 Ga0395901_0000145 Ga0395901_0000145_12630_14204 511
12 3300053125 Ga0500618_000006 Ga0500618_000006_148426_149997 511
13 iso_pu_bacteria 2919177583 2919177789 512
14 3300053122 Ga0500608_000607 Ga0500608_000607_6470_8041 514
15 iso_pu_bacteria 2945924605 2945927312 515
16 iso_pu_bacteria 2582581278 2585145420 517
17 iso_pu_bacteria 2585428045 2587678007 517
18 iso_pu_bacteria 2585428060 2587748294 517
19 iso_pu_bacteria 2585428115 2587943536 517
20 iso_pu_bacteria 2585428183 2588215155 517
21 iso_pu_bacteria 2585428185 2588222357 517
22 iso_pu_bacteria 2585428187 2588234254 517
23 iso_pu_bacteria 2588253712 2588444680 517
24 iso_pu_bacteria 2588254255 2590600215 517
25 iso_pu_bacteria 2588254257 2590612945 517
26 iso_pu_bacteria 2739367874 2740057363 517
27 iso_pu_bacteria 2765235839 2765573645 517
28 iso_pu_bacteria 2842083920 2842084806 517
29 iso_pu_bacteria 2905999023 2906000282 517
30 iso_pu_bacteria 2946019816 2946022183 517
31 iso_pu_bacteria 2585428182 2588209873 518
32 iso_pu_bacteria 2599185184 2599481303 518
33 iso_pu_bacteria 2738541283 2738757723 518
34 iso_pu_bacteria 2738543023 2739304042 518
35 iso_pu_bacteria 2739367656 2739615678 518
36 iso_pu_bacteria 2739367663 2739647787 518
37 iso_pu_bacteria 2816332188 2816873991 518
38 iso_pu_bacteria 2818991444 2819588228 518
39 iso_pu_bacteria 2842903701 2842906684 518
40 iso_pu_bacteria 2852623160 2852626259 518
41 iso_pu_bacteria 2857627736 2857632225 518
42 iso_pu_bacteria 2884791551 2884792164 518
43 iso_pu_bacteria 2884933994 2884934710 518
44 iso_pu_bacteria 2889290771 2889295760 518
45 iso_pu_bacteria 2910245624 2910249484 518
46 iso_pu_bacteria 2919437846 2919439959 518
47 iso_pu_bacteria 2928078545 2928081903 518
48 iso_pu_bacteria 2928147474 2928151922 518
49 iso_pu_bacteria 2932082852 2932088113 518
50 3300013104 Ga0157370_10000195 Ga0157370_1000019539 519
51 3300046530 Ga0495654_0000001 Ga0495654_0000001_1212681_1214240 519
52 3300013307 Ga0157372_10020419 Ga0157372_100204197 520
53 3300025250 Ga0209026_1002480 Ga0209026_10024804 520
54 3300025914 Ga0207671_10000025 Ga0207671_10000025226 520
55 3300049579 Ga0501043_0111526 Ga0501043_0111526_138_1703 520
56 3300049581 Ga0501047_0092724 Ga0501047_0092724_137_1705 520
57 3300049822 Ga0501035_0025902 Ga0501035_0025902_636_2204 520
58 3300049823 Ga0501044_0069483 Ga0501044_0069483_689_2257 520
59 2162886007 SwRhRL2b_contig_3295531 SwRhRL2b_0319.00003990 521
60 3300001990 JGI24737J22298_10000896 JGI24737J22298_1000089611 521
61 3300002067 JGI24735J21928_10000020 JGI24735J21928_10000020112 521
62 3300002077 JGI24744J21845_10002589 JGI24744J21845_100025892 521
63 3300002738 JGI25154J39366_1000042 JGI25154J39366_100004226 521
64 3300003214 JGI25165J46597_1004156 JGI25165J46597_10041562 521
65 3300003316 rootH1_10053482 rootH1_100534822 521
66 3300003316 rootH1_10089409 rootH1_100894094 521
67 3300003322 rootL2_10124802 rootL2_101248022 521
68 3300003323 rootH1_10006030 rootH1_1000603028 521
69 3300003323 rootH1_10081784 rootH1_100817842 521
70 3300003323 rootH1_10160490 rootH1_101604902 521
71 3300005288 Ga0065714_10064764 Ga0065714_1006476413 521
72 3300005327 Ga0070658_10000340 Ga0070658_1000034033 521
73 3300005328 Ga0070676_10000474 Ga0070676_100004749 521
74 3300005336 Ga0070680_100004607 Ga0070680_1000046073 521
75 3300005337 Ga0070682_100000130 Ga0070682_10000013044 521
76 3300005338 Ga0068868_100022294 Ga0068868_1000222943 521
77 3300005339 Ga0070660_100009269 Ga0070660_1000092693 521
78 3300005347 Ga0070668_100101687 Ga0070668_1001016872 521
79 3300005355 Ga0070671_100011572 Ga0070671_1000115727 521
80 3300005366 Ga0070659_100004657 Ga0070659_1000046575 521
81 3300005366 Ga0070659_100033212 Ga0070659_1000332123 521
82 3300005456 Ga0070678_100003672 Ga0070678_1000036723 521
83 3300005457 Ga0070662_100000046 Ga0070662_10000004639 521
84 3300005458 Ga0070681_10008517 Ga0070681_100085178 521
85 3300005459 Ga0068867_100001280 Ga0068867_1000012803 521
86 3300005530 Ga0070679_100008384 Ga0070679_1000083843 521
87 3300005543 Ga0070672_100200127 Ga0070672_1002001272 521
88 3300005563 Ga0068855_100000121 Ga0068855_10000012162 521
89 3300005563 Ga0068855_100000229 Ga0068855_10000022945 521
90 3300005563 Ga0068855_100073759 Ga0068855_1000737593 521
91 3300005563 Ga0068855_100096191 Ga0068855_1000961913 521
92 3300005578 Ga0068854_100048519 Ga0068854_1000485191 521
93 3300005614 Ga0068856_100000399 Ga0068856_10000039931 521
94 3300005616 Ga0068852_100013027 Ga0068852_1000130275 521
95 3300006195 Ga0075366_10000117 Ga0075366_1000011722 521
96 3300006237 Ga0097621_100002108 Ga0097621_10000210812 521
97 3300006358 Ga0068871_100002497 Ga0068871_10000249712 521
98 3300006881 Ga0068865_100000025 Ga0068865_10000002516 521
99 3300009093 Ga0105240_10035160 Ga0105240_100351602 521
100 3300009093 Ga0105240_10045817 Ga0105240_100458172 521
101 3300009093 Ga0105240_10116666 Ga0105240_101166662 521
102 3300009093 Ga0105240_10260110 Ga0105240_102601102 521
103 3300009148 Ga0105243_10000432 Ga0105243_100004325 521
104 3300009174 Ga0105241_10017654 Ga0105241_100176542 521
105 3300009545 Ga0105237_10000146 Ga0105237_1000014697 521
106 3300009545 Ga0105237_10003965 Ga0105237_1000396513 521
107 3300009545 Ga0105237_10008328 Ga0105237_100083286 521
108 3300009545 Ga0105237_10011333 Ga0105237_100113337 521
109 3300009545 Ga0105237_10033873 Ga0105237_100338734 521
110 3300009551 Ga0105238_10004370 Ga0105238_100043706 521
111 3300009551 Ga0105238_10036984 Ga0105238_100369844 521
112 3300010375 Ga0105239_10000053 Ga0105239_1000005340 521
113 3300010375 Ga0105239_10000068 Ga0105239_1000006813 521
114 3300010375 Ga0105239_10000712 Ga0105239_1000071248 521
115 3300010375 Ga0105239_10001575 Ga0105239_1000157518 521
116 3300010375 Ga0105239_10003355 Ga0105239_100033555 521
117 3300013100 Ga0157373_10001175 Ga0157373_1000117510 521
118 3300013100 Ga0157373_10038850 Ga0157373_100388502 521
119 3300013102 Ga0157371_10000476 Ga0157371_1000047610 521
120 3300013104 Ga0157370_10000132 Ga0157370_1000013234 521
121 3300013104 Ga0157370_10003789 Ga0157370_100037893 521
122 3300013104 Ga0157370_10022266 Ga0157370_100222663 521
123 3300013105 Ga0157369_10000403 Ga0157369_1000040333 521
124 3300013105 Ga0157369_10018740 Ga0157369_100187406 521
125 3300013105 Ga0157369_10081138 Ga0157369_100811381 521
126 3300013105 Ga0157369_10139572 Ga0157369_101395722 521
127 3300013296 Ga0157374_10000147 Ga0157374_1000014754 521
128 3300013296 Ga0157374_10014713 Ga0157374_100147132 521
129 3300013297 Ga0157378_10075822 Ga0157378_100758223 521
130 3300013306 Ga0163162_10000044 Ga0163162_10000044119 521
131 3300013307 Ga0157372_10000398 Ga0157372_100003988 521
132 3300013307 Ga0157372_10002608 Ga0157372_1000260811 521
133 3300013307 Ga0157372_10006526 Ga0157372_100065267 521
134 3300013307 Ga0157372_10024809 Ga0157372_100248096 521
135 3300013308 Ga0157375_10000204 Ga0157375_1000020420 521
136 3300013308 Ga0157375_10003196 Ga0157375_100031969 521
137 3300014497 Ga0182008_10005667 Ga0182008_100056675 521
138 3300015261 Ga0182006_1000016 Ga0182006_1000016155 521
139 3300015261 Ga0182006_1000521 Ga0182006_10005217 521
140 3300017792 Ga0163161_10000705 Ga0163161_100007053 521
141 3300017792 Ga0163161_10017510 Ga0163161_100175103 521
142 3300017792 Ga0163161_10054771 Ga0163161_100547712 521
143 3300025231 Ga0207427_100043 Ga0207427_10004376 521
144 3300025233 Ga0209437_100030 Ga0209437_100030117 521
145 3300025233 Ga0209437_100170 Ga0209437_10017043 521
146 3300025261 Ga0209233_1000349 Ga0209233_100034921 521
147 3300025261 Ga0209233_1000511 Ga0209233_100051113 521
148 3300025261 Ga0209233_1003484 Ga0209233_10034842 521
149 3300025728 Ga0207655_1000013 Ga0207655_100001348 521
150 3300025904 Ga0207647_10000027 Ga0207647_1000002747 521
151 3300025904 Ga0207647_10000289 Ga0207647_1000028925 521
152 3300025904 Ga0207647_10053531 Ga0207647_100535312 521
153 3300025907 Ga0207645_10000300 Ga0207645_1000030011 521
154 3300025909 Ga0207705_10000111 Ga0207705_1000011111 521
155 3300025912 Ga0207707_10001685 Ga0207707_1000168517 521
156 3300025913 Ga0207695_10000179 Ga0207695_10000179168 521
157 3300025913 Ga0207695_10007613 Ga0207695_100076136 521
158 3300025913 Ga0207695_10013006 Ga0207695_100130066 521
159 3300025913 Ga0207695_10014091 Ga0207695_100140918 521
160 3300025913 Ga0207695_10025919 Ga0207695_100259197 521
161 3300025914 Ga0207671_10000112 Ga0207671_1000011211 521
162 3300025914 Ga0207671_10000478 Ga0207671_100004788 521
163 3300025914 Ga0207671_10000634 Ga0207671_100006348 521
164 3300025914 Ga0207671_10009305 Ga0207671_100093053 521
165 3300025914 Ga0207671_10033215 Ga0207671_100332152 521
166 3300025917 Ga0207660_10020554 Ga0207660_100205542 521
167 3300025919 Ga0207657_10012609 Ga0207657_100126093 521
168 3300025921 Ga0207652_10003689 Ga0207652_1000368910 521
169 3300025924 Ga0207694_10023256 Ga0207694_100232564 521
170 3300025924 Ga0207694_10028317 Ga0207694_100283172 521
171 3300025932 Ga0207690_10005729 Ga0207690_100057295 521
172 3300025933 Ga0207706_10000010 Ga0207706_10000010121 521
173 3300025934 Ga0207686_10050001 Ga0207686_100500012 521
174 3300025935 Ga0207709_10000445 Ga0207709_100004455 521
175 3300025938 Ga0207704_10000016 Ga0207704_1000001645 521
176 3300025949 Ga0207667_10000030 Ga0207667_10000030175 521
177 3300025949 Ga0207667_10001876 Ga0207667_100018768 521
178 3300025949 Ga0207667_10053750 Ga0207667_100537503 521
179 3300025949 Ga0207667_10077172 Ga0207667_100771723 521
180 3300025949 Ga0207667_10114645 Ga0207667_101146452 521
181 3300025981 Ga0207640_10037348 Ga0207640_100373483 521
182 3300026023 Ga0207677_10065763 Ga0207677_100657632 521
183 3300026078 Ga0207702_10001826 Ga0207702_100018262 521
184 3300026089 Ga0207648_10003384 Ga0207648_100033846 521
185 3300028794 Ga0307515_10000299 Ga0307515_1000029934 521
186 3300028794 Ga0307515_10000712 Ga0307515_1000071270 521
187 3300031911 Ga0307412_10000022 Ga0307412_10000022193 521
188 3300031911 Ga0307412_10001764 Ga0307412_100017645 521
189 3300032002 Ga0307416_100000092 Ga0307416_10000009233 521
190 3300032004 Ga0307414_10098414 Ga0307414_100984142 521
191 3300033179 Ga0307507_10000078 Ga0307507_1000007820 521
192 3300033180 Ga0307510_10003306 Ga0307510_100033062 521
193 3300037312 Ga0395899_0000011 Ga0395899_0000011_275974_277542 521
194 3300038443 Ga0395901_0054025 Ga0395901_0054025_445_2016 521
195 3300042004 Ga0439445_0000016 Ga0439445_0000016_1799_3364 521
196 3300046453 Ga0495627_000002 Ga0495627_000002_176262_177827 521
197 3300046453 Ga0495627_019487 Ga0495627_019487_617_2182 521
198 3300046457 Ga0495590_0004042 Ga0495590_0004042_1257_2822 521
199 3300046462 Ga0495651_0126909 Ga0495651_0126909_120_1691 521
200 3300046471 Ga0495650_0000808 Ga0495650_0000808_34283_35854 521
201 3300046492 Ga0495585_0000029 Ga0495585_0000029_121774_123345 521
202 3300046492 Ga0495585_0000092 Ga0495585_0000092_30436_32007 521
203 3300046500 Ga0495596_0000182 Ga0495596_0000182_12931_14496 521
204 3300046507 Ga0495606_0000021 Ga0495606_0000021_41610_43181 521
205 3300046507 Ga0495606_0004223 Ga0495606_0004223_10423_11994 521
206 3300046507 Ga0495606_0011052 Ga0495606_0011052_2238_3803 521
207 3300046507 Ga0495606_0045560 Ga0495606_0045560_158_1723 521
208 3300046512 Ga0495610_0000347 Ga0495610_0000347_24484_26055 521
209 3300046513 Ga0495616_0001094 Ga0495616_0001094_13887_15458 521
210 3300046513 Ga0495616_0003779 Ga0495616_0003779_4344_5915 521
211 3300046519 Ga0495632_0001026 Ga0495632_0001026_4424_5989 521
212 3300046519 Ga0495632_0069341 Ga0495632_0069341_50_1615 521
213 3300046524 Ga0495648_0030770 Ga0495648_0030770_1643_3214 521
214 3300046525 Ga0495663_0003471 Ga0495663_0003471_1206_2771 521
215 3300046529 Ga0495652_0082551 Ga0495652_0082551_577_2148 521
216 3300046538 Ga0495609_0000025 Ga0495609_0000025_167586_169151 521
217 3300046538 Ga0495609_0029360 Ga0495609_0029360_290_1861 521
218 3300046558 Ga0495633_0000004 Ga0495633_0000004_120620_122191 521
219 3300046558 Ga0495633_0002349 Ga0495633_0002349_5553_7118 521
220 3300046558 Ga0495633_0019473 Ga0495633_0019473_442_2013 521
221 3300046616 Ga0495668_0000058 Ga0495668_0000058_190807_192378 521
222 3300046660 Ga0495625_0000310 Ga0495625_0000310_40406_41971 521
223 3300046660 Ga0495625_0000314 Ga0495625_0000314_29523_31094 521
224 3300046660 Ga0495625_0000649 Ga0495625_0000649_16353_17924 521
225 3300046660 Ga0495625_0008165 Ga0495625_0008165_4430_6001 521
226 3300046660 Ga0495625_0024163 Ga0495625_0024163_2523_4094 521
227 3300046665 Ga0495661_0002548 Ga0495661_0002548_2983_4554 521
228 3300046694 Ga0495649_0000007 Ga0495649_0000007_470707_472278 521
229 3300047443 Ga0495687_000385 Ga0495687_000385_7128_8699 521
230 3300047443 Ga0495687_009465 Ga0495687_009465_1638_3209 521
231 3300047472 Ga0495686_0000965 Ga0495686_0000965_30380_31954 521
232 3300047472 Ga0495686_0003620 Ga0495686_0003620_5159_6730 521
233 3300047472 Ga0495686_0005141 Ga0495686_0005141_4035_5600 521
234 3300047472 Ga0495686_0009725 Ga0495686_0009725_3312_4877 521
235 3300047472 Ga0495686_0019593 Ga0495686_0019593_702_2273 521
236 3300048089 Ga0495614_0009962 Ga0495614_0009962_197_1768 521
237 3300048919 Ga0496116_0000006 Ga0496116_0000006_747674_749239 521
238 3300048920 Ga0496117_0000023 Ga0496117_0000023_297751_299316 521
239 3300048921 Ga0496118_0000660 Ga0496118_0000660_15476_17041 521
240 3300048922 Ga0496119_0000010 Ga0496119_0000010_139276_140841 521
241 3300048925 Ga0496122_0000066 Ga0496122_0000066_214133_215698 521
242 3300048925 Ga0496122_0000166 Ga0496122_0000166_50111_51676 521
243 3300048925 Ga0496122_0000798 Ga0496122_0000798_38410_39978 521
244 3300048925 Ga0496122_0004308 Ga0496122_0004308_3614_5179 521
245 3300048925 Ga0496122_0004861 Ga0496122_0004861_6344_7912 521
246 3300048926 Ga0496123_0000414 Ga0496123_0000414_60909_62474 521
247 3300048926 Ga0496123_0007085 Ga0496123_0007085_5810_7378 521
248 3300048926 Ga0496123_0010249 Ga0496123_0010249_4994_6559 521
249 3300048926 Ga0496123_0012993 Ga0496123_0012993_5259_6827 521
250 3300048927 Ga0496124_0002784 Ga0496124_0002784_16654_18219 521
251 3300048928 Ga0496125_0000736 Ga0496125_0000736_20000_21568 521
252 3300048928 Ga0496125_0010121 Ga0496125_0010121_615_2180 521
253 3300048929 Ga0496126_0000638 Ga0496126_0000638_50181_51746 521
254 3300050493 nmdc:mga0k408_49_c2 nmdc:mga0k408_49_c2_15479_17050 521
255 3300053157 Ga0500624_000262 Ga0500624_000262_1598_3169 521

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04069

OpuAC

Substrate binding domain of ABC-type glycine betaine transport system

296

433

0.97

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

1

116

0.92

PF04069

OpuAC

Substrate binding domain of ABC-type glycine betaine transport system

138

283

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ppr-assembly2.cif.gz_B structures of the substrate-binding protein provide insights into the multiple compatible solutes binding specificities of bacillus subtilis abc transporter opuc 0.8909 237 373
6efr-assembly1.cif.gz_A crystal structure of inicsnfr 1.0 0.8805 238 373
7txk-assembly2.cif.gz_B crystal structure of egtu solute binding domain from streptococcus pneumoniae d39 in complex with l-ergothioneine 0.8745 238 371
6per-assembly1.cif.gz_A crystal structure of ligand-free iserosnfr 0.8741 237 373
7s7y-assembly1.cif.gz_A crystal structure of icytsnfr cytisine sensor precursor binding protein 0.8725 231 373
ID Description Score Start End Superfamily
af_Q2FVG9_10_202_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8669 17 205 1.10.3720.10
af_P14176_140_330_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8528 19 203 1.10.3720.10
af_Q2FVH1_15_213_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8516 13 205 1.10.3720.10
af_Q2FVG9_10_202_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8473 17 205 1.10.3720.10
af_P33361_169_379_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8301 14 203 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A377NCQ8-F1-model_v4 Glycine betaine/L-proline transport system permease protein proW 0.9263 23 153 GO:0005886
GO:0031460
GO:0055085
AF-A0A3N5TV83-F1-model_v4 ABC transporter permease subunit 0.9073 23 155 GO:0005886
GO:0055085
AF-A0A659YJD3-F1-model_v4 deleted 0.9065 6 155
AF-A0A1E3GZC9-F1-model_v4 Putative aliphatic sulfonates transport permease protein SsuC 0.9023 10 147 GO:0005886
GO:0055085
AF-A0A3N5G209-F1-model_v4 ABC transporter permease 0.9016 10 151 GO:0005886
GO:0055085

Feature Viewer

pLDDT pTM Quality
75.67 0.6 Medium
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Predicted Structure (AlphaFold2)

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