F365524

General Info

Members Datasets Scaffolds Average Seq Length
255 158 510 327

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100000753|Ga0070698_10000075326
Length 357
Sequence MSHFWRIAALETRSRRERRYTPRVRSIWKRIRYRLEWAGLLIAAKLLPLLSRKGCYRFALALGTLMSILDRDGRKVALSNLEVAFGDRFSRLERERIARASFQHFARTMLDLLWSPRLTAENFSRYIELENIEETVRYGPERSIMIACYHYGNFEWLSLACGFLDLKGTIISQEFKNSLLDPIFKRLREQSGHELIPRQGGIVRLYKVLRRKGRTALLVDLTLHPKMPSVAIDCFGLKTSVTSAHAWLNEQTGAPIIPAHCEPLPNGRYRLVFHPKIETAGRSYQQIAQACWNSFEPYVRKNPAPWLWMYKHWRYKPAAADRPYPFYARPHPRFDKRIDAGIENKPTPAKMERLPNG

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
24 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
25 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
26 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
27 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
28 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
29 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
30 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
31 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
32 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
33 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
36 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
37 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
38 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
39 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
40 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
41 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
44 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
52 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
53 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
54 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
55 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
56 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
61 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
62 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
81 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
114 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
115 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
116 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
117 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
124 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
125 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
126 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
127 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
128 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
129 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
130 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
131 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
132 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
133 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
134 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
135 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
136 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
137 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
138 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
139 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
140 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
141 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
142 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
143 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
144 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
145 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
146 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
147 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
152 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
156 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
157 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
158 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 5.49
Rhizosphere 94.51
Stem 0
Stem Tuber 0
Unclassified 28.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100000753 3300005471 Bacteria 34981
2 JGI25405J52794_10000363 3300003911 Bacteria 6383
3 JGI25405J52794_10001849 3300003911 Unclassified 3558
4 JGI25405J52794_10005803 3300003911 Unclassified 2239
5 Ga0065704_10009742 3300005289 Unclassified 2628
6 Ga0065704_10019400 3300005289 Bacteria 2089
7 Ga0065712_10003023 3300005290 Bacteria 6311
8 Ga0065712_10006535 3300005290 Bacteria 3350
9 Ga0065715_10001127 3300005293 Bacteria 7677
10 Ga0065715_10003113 3300005293 Bacteria 5101
11 Ga0065715_10090337 3300005293 Bacteria 7160
12 Ga0065715_10223957 3300005293 Bacteria 1260
13 Ga0065707_10007318 3300005295 Bacteria 2822
14 Ga0070676_10026978 3300005328 Unclassified 3254
15 Ga0070683_100028594 3300005329 Bacteria 5039
16 Ga0070683_100083477 3300005329 Archaea 2992
17 Ga0068869_100282256 3300005334 Bacteria 1336
18 Ga0068868_100030065 3300005338 Bacteria 4164
19 Ga0068868_100242781 3300005338 Unclassified 1514
20 Ga0070660_100113803 3300005339 Bacteria 2154
21 Ga0070689_100021564 3300005340 Unclassified 4799
22 Ga0070687_100010401 3300005343 Unclassified 4023
23 Ga0070687_100058156 3300005343 Unclassified 2030
24 Ga0070661_100019748 3300005344 Archaea 4802
25 Ga0070668_100026992 3300005347 Bacteria 4359
26 Ga0070669_100014710 3300005353 Bacteria 5571
27 Ga0070675_100008983 3300005354 Bacteria 7763
28 Ga0070671_100122724 3300005355 Bacteria 2186
29 Ga0070671_100130037 3300005355 Bacteria 2121
30 Ga0070673_100055343 3300005364 Bacteria 3125
31 Ga0070673_100271060 3300005364 Unclassified 1486
32 Ga0070688_100127997 3300005365 Bacteria 1709
33 Ga0070659_100001300 3300005366 Bacteria 18122
34 Ga0070667_100107495 3300005367 Unclassified 2416
35 Ga0070709_10028802 3300005434 Bacteria 3315
36 Ga0070709_10030809 3300005434 Unclassified 3222
37 Ga0070713_100089876 3300005436 Bacteria 2639
38 Ga0070710_10067783 3300005437 Bacteria 2048
39 Ga0070711_100154126 3300005439 Bacteria 1735
40 Ga0070711_100160282 3300005439 Bacteria 1705
41 Ga0070705_100020014 3300005440 Unclassified 3532
42 Ga0070705_100059410 3300005440 Bacteria 2264
43 Ga0070705_100062200 3300005440 Bacteria 2222
44 Ga0070700_100007132 3300005441 Bacteria 6016
45 Ga0070694_100060942 3300005444 Unclassified 2574
46 Ga0070708_100003441 3300005445 Bacteria 12391
47 Ga0070708_100072619 3300005445 Unclassified 3100
48 Ga0070708_100143441 3300005445 Bacteria 2216
49 Ga0070708_100208416 3300005445 Bacteria 1831
50 Ga0070663_100081655 3300005455 Unclassified 2377
51 Ga0070678_100216458 3300005456 Unclassified 1590
52 Ga0070662_100077644 3300005457 Bacteria 2464
53 Ga0070662_100433792 3300005457 Unclassified 1088
54 Ga0070681_10054680 3300005458 Bacteria 3978
55 Ga0070685_10050534 3300005466 Bacteria 2402
56 Ga0070706_100001880 3300005467 Bacteria 21703
57 Ga0070706_100012347 3300005467 Bacteria 7916
58 Ga0070706_100052300 3300005467 Bacteria 3770
59 Ga0070706_100062559 3300005467 Bacteria 3439
60 Ga0070706_100078242 3300005467 Unclassified 3062
61 Ga0070706_100082988 3300005467 Bacteria 2969
62 Ga0070706_100132669 3300005467 Unclassified 2325
63 Ga0070706_100140124 3300005467 Bacteria 2258
64 Ga0070706_100165684 3300005467 Bacteria 2064
65 Ga0070706_100334390 3300005467 Unclassified 1412
66 Ga0070707_100054427 3300005468 Bacteria 3836
67 Ga0070707_100130316 3300005468 Bacteria 2446
68 Ga0070707_100145664 3300005468 Bacteria 2305
69 Ga0070707_100295566 3300005468 Unclassified 1574
70 Ga0070707_100500706 3300005468 Unclassified 1176
71 Ga0070698_100117488 3300005471 Bacteria 2622
72 Ga0070699_100054131 3300005518 Unclassified 3474
73 Ga0070699_100472159 3300005518 Unclassified 1138
74 Ga0070679_100274185 3300005530 Bacteria 1640
75 Ga0070684_100000230 3300005535 Bacteria 38807
76 Ga0070684_100007084 3300005535 Bacteria 8714
77 Ga0070684_100081922 3300005535 Bacteria 2856
78 Ga0070697_100002416 3300005536 Bacteria 14361
79 Ga0070697_100019669 3300005536 Bacteria 5334
80 Ga0070697_100040107 3300005536 Bacteria 3787
81 Ga0070697_100085802 3300005536 Bacteria 2597
82 Ga0070665_100139134 3300005548 Unclassified 2431
83 Ga0070665_100253521 3300005548 Bacteria 1760
84 Ga0070665_100416357 3300005548 Unclassified 1352
85 Ga0070665_100582426 3300005548 Unclassified 1132
86 Ga0070704_100070419 3300005549 Unclassified 2537
87 Ga0070664_100076652 3300005564 Bacteria 2874
88 Ga0070664_100151166 3300005564 Bacteria 2050
89 Ga0068856_100020292 3300005614 Bacteria 6454
90 Ga0070702_100117443 3300005615 Unclassified 1660
91 Ga0068859_100047205 3300005617 Bacteria 4327
92 Ga0068863_100443810 3300005841 Bacteria 1273
93 Ga0068860_100005295 3300005843 Bacteria 13095
94 Ga0068862_100054416 3300005844 Bacteria 3427
95 Ga0081455_10000902 3300005937 Bacteria 38291
96 Ga0081455_10001175 3300005937 Bacteria 32732
97 Ga0081455_10007744 3300005937 Bacteria 11265
98 Ga0081455_10008963 3300005937 Bacteria 10338
99 Ga0081455_10011019 3300005937 Bacteria 9106
100 Ga0081455_10056679 3300005937 Bacteria 3326
101 Ga0081455_10130234 3300005937 Bacteria 1968
102 Ga0081540_1000016 3300005983 Bacteria 165370
103 Ga0081540_1054550 3300005983 Bacteria 1952
104 Ga0081539_10006880 3300005985 Bacteria 10614
105 Ga0081539_10030219 3300005985 Bacteria 3368
106 Ga0070717_10008325 3300006028 Bacteria 7744
107 Ga0070717_10025294 3300006028 Bacteria 4719
108 Ga0070717_10030934 3300006028 Bacteria 4302
109 Ga0070717_10262282 3300006028 Unclassified 1529
110 Ga0070716_100014051 3300006173 Bacteria 4095
111 Ga0070712_100035973 3300006175 Bacteria 3365
112 Ga0075434_100201256 3300006871 Bacteria 2011
113 Ga0075434_100662282 3300006871 Unclassified 1062
114 Ga0075436_100077072 3300006914 Bacteria 2309
115 Ga0097620_100047205 3300006931 Bacteria 4327
116 Ga0099794_10102023 3300007265 Bacteria 1432
117 Ga0099795_10042419 3300007788 Unclassified 1624
118 Ga0105250_10024747 3300009092 Bacteria 2418
119 Ga0105245_10009380 3300009098 Bacteria 8536
120 Ga0105245_10119000 3300009098 Unclassified 2465
121 Ga0105245_10365816 3300009098 Unclassified 1432
122 Ga0105245_10475667 3300009098 Bacteria 1262
123 Ga0114129_10011678 3300009147 Bacteria 12500
124 Ga0114129_10298712 3300009147 Bacteria 2147
125 Ga0105243_10110358 3300009148 Bacteria 2300
126 Ga0105243_10303619 3300009148 Unclassified 1448
127 Ga0105248_10330390 3300009177 Bacteria 1717
128 Ga0105249_10036562 3300009553 Bacteria 4455
129 Ga0105239_10025384 3300010375 Bacteria 6524
130 Ga0105239_10068241 3300010375 Unclassified 3907
131 Ga0105239_10448756 3300010375 Unclassified 1463
132 Ga0105246_10112203 3300011119 Bacteria 2005
133 Ga0157369_10039892 3300013105 Bacteria 5130
134 Ga0157374_10033539 3300013296 Archaea 4684
135 Ga0157374_10137817 3300013296 Bacteria 2367
136 Ga0157374_10189595 3300013296 Bacteria 2011
137 Ga0157378_10076519 3300013297 Bacteria 3015
138 Ga0157378_10390007 3300013297 Bacteria 1369
139 Ga0163162_10015322 3300013306 Bacteria 7490
140 Ga0163162_10170007 3300013306 Unclassified 2304
141 Ga0157372_10068302 3300013307 Bacteria 3996
142 Ga0157375_10080272 3300013308 Unclassified 3299
143 Ga0163163_10177568 3300014325 Bacteria 2176
144 Ga0157377_10025441 3300014745 Bacteria 3157
145 Ga0157379_10053736 3300014968 Unclassified 3599
146 Ga0157376_10025168 3300014969 Bacteria 4685
147 Ga0207673_1000713 3300025290 Bacteria 3558
148 Ga0207697_10001007 3300025315 Bacteria 15769
149 Ga0207697_10001031 3300025315 Bacteria 15540
150 Ga0207697_10001517 3300025315 Bacteria 12603
151 Ga0207697_10001601 3300025315 Bacteria 12225
152 Ga0207697_10005670 3300025315 Bacteria 5762
153 Ga0207710_10137687 3300025900 Unclassified 1177
154 Ga0207680_10099938 3300025903 Bacteria 1862
155 Ga0207699_10065880 3300025906 Bacteria 2197
156 Ga0207699_10134508 3300025906 Unclassified 1617
157 Ga0207645_10005389 3300025907 Bacteria 9283
158 Ga0207684_10000885 3300025910 Bacteria 34200
159 Ga0207684_10005595 3300025910 Bacteria 11565
160 Ga0207684_10051949 3300025910 Bacteria 3478
161 Ga0207684_10091504 3300025910 Bacteria 2592
162 Ga0207684_10166885 3300025910 Bacteria 1897
163 Ga0207684_10446921 3300025910 Unclassified 1110
164 Ga0207707_10093936 3300025912 Bacteria 2620
165 Ga0207693_10001628 3300025915 Bacteria 19824
166 Ga0207693_10013153 3300025915 Bacteria 6676
167 Ga0207693_10021558 3300025915 Bacteria 5119
168 Ga0207693_10159162 3300025915 Bacteria 1777
169 Ga0207663_10068545 3300025916 Bacteria 2279
170 Ga0207663_10109154 3300025916 Unclassified 1875
171 Ga0207662_10073881 3300025918 Unclassified 2069
172 Ga0207657_10096182 3300025919 Bacteria 2464
173 Ga0207646_10002096 3300025922 Bacteria 23909
174 Ga0207646_10031220 3300025922 Bacteria 4824
175 Ga0207646_10043530 3300025922 Unclassified 4032
176 Ga0207646_10102013 3300025922 Unclassified 2572
177 Ga0207646_10194184 3300025922 Bacteria 1833
178 Ga0207681_10261254 3300025923 Bacteria 1355
179 Ga0207659_10032030 3300025926 Unclassified 3604
180 Ga0207659_10181606 3300025926 Unclassified 1667
181 Ga0207664_10043474 3300025929 Bacteria 3514
182 Ga0207664_10124139 3300025929 Bacteria 2165
183 Ga0207644_10058979 3300025931 Bacteria 2775
184 Ga0207644_10317509 3300025931 Unclassified 1259
185 Ga0207690_10058936 3300025932 Unclassified 2599
186 Ga0207706_10003056 3300025933 Bacteria 16109
187 Ga0207706_10083084 3300025933 Unclassified 2815
188 Ga0207706_10098784 3300025933 Bacteria 2568
189 Ga0207670_10197470 3300025936 Unclassified 1526
190 Ga0207665_10262597 3300025939 Unclassified 1280
191 Ga0207661_10063231 3300025944 Unclassified 2997
192 Ga0207679_10110471 3300025945 Bacteria 2169
193 Ga0207679_10190048 3300025945 Unclassified 1706
194 Ga0207712_10025304 3300025961 Unclassified 3943
195 Ga0207668_10037090 3300025972 Unclassified 3259
196 Ga0207658_10031216 3300025986 Unclassified 3781
197 Ga0207678_10001436 3300026067 Bacteria 21863
198 Ga0207708_10026697 3300026075 Unclassified 4372
199 Ga0207676_10252183 3300026095 Unclassified 1589
200 Ga0207675_100037435 3300026118 Unclassified 4525
201 Ga0207683_10145539 3300026121 Bacteria 2137
202 Ga0268266_10021135 3300028379 Bacteria 5545
203 Ga0268265_10025996 3300028380 Bacteria 4162
204 Ga0373956_0181400 3300035119 Bacteria 995
205 Ga0373943_0130884 3300035170 Bacteria 1343
206 Ga0373955_0050174 3300035172 Unclassified 2268
207 Ga0373935_0012595 3300035692 Bacteria 5088
208 Ga0373947_0007529 3300035725 Bacteria 6299
209 Ga0373937_0084557 3300036401 Bacteria 2935
210 Ga0395899_0087898 3300037312 Bacteria 2255
211 Ga0395900_0002775 3300037418 Bacteria 19144
212 Ga0395900_0312376 3300037418 Bacteria 1555
213 Ga0395898_0195632 3300037466 Unclassified 1932
214 Ga0395901_0000761 3300038443 Bacteria 36134
215 Ga0451576_0400465 3300045051 Bacteria 1439
216 Ga0495592_0005860 3300046454 Bacteria 9119
217 Ga0495629_0085626 3300046459 Unclassified 2199
218 Ga0495629_0115700 3300046459 Unclassified 1869
219 Ga0495582_0161932 3300046473 Bacteria 1273
220 Ga0495584_0163143 3300046491 Unclassified 1133
221 Ga0495608_0170042 3300046511 Bacteria 1383
222 Ga0495618_0081608 3300046514 Bacteria 2065
223 Ga0495628_0029460 3300046516 Bacteria 4450
224 Ga0495652_0056559 3300046529 Bacteria 3330
225 Ga0495587_0012445 3300046536 Bacteria 5354
226 Ga0495645_0023948 3300046543 Bacteria 4426
227 Ga0495623_0018437 3300046679 Bacteria 4508
228 Ga0495646_0005107 3300046680 Bacteria 8275
229 Ga0495604_0015893 3300047317 Bacteria 6009
230 Ga0495604_0162699 3300047317 Bacteria 1576
231 Ga0495674_0108325 3300047319 Bacteria 2357
232 Ga0495680_0221619 3300047322 Bacteria 1350
233 Ga0495675_0051853 3300047444 Bacteria 2605
234 Ga0495684_0210836 3300047471 Bacteria 1428
235 Ga0495602_0044869 3300048088 Bacteria 4005
236 Ga0496101_0185820 3300048904 Bacteria 1602
237 Ga0496101_0429138 3300048904 Unclassified 1042
238 Ga0496103_0193200 3300048906 Bacteria 1309
239 Ga0496105_0170916 3300048908 Unclassified 1782
240 Ga0496107_0160348 3300048910 Bacteria 1667
241 Ga0496107_0168687 3300048910 Bacteria 1624
242 Ga0496108_0023774 3300048911 Bacteria 5043
243 Ga0496109_0028913 3300048912 Bacteria 4962
244 Ga0496109_0528538 3300048912 Unclassified 1113
245 Ga0496111_0213670 3300048914 Bacteria 1433
246 Ga0496112_0060154 3300048915 Archaea 3743
247 Ga0496113_0091302 3300048916 Bacteria 2347
248 Ga0496114_0202134 3300048917 Bacteria 1740
249 Ga0496115_0086564 3300048918 Bacteria 2557
250 nmdc:mga05p37_19025_c1 3300050507 Bacteria 8305
251 nmdc:mga08y16_113971_c1 3300050511 Unclassified 2814
252 nmdc:mga0n895_378133_c1 3300050512 Unclassified 1433
253 Ga0495601_0027251 3300053077 Bacteria 3532
254 Ga0495612_0029703 3300053078 Bacteria 2202
255 Ga0495655_0030583 3300053083 Bacteria 1304
256 Ga0070698_100000753
257 JGI25405J52794_10000363
258 JGI25405J52794_10001849
259 JGI25405J52794_10005803
260 Ga0065704_10009742
261 Ga0065704_10019400
262 Ga0065712_10003023
263 Ga0065712_10006535
264 Ga0065715_10001127
265 Ga0065715_10003113
266 Ga0065715_10090337
267 Ga0065715_10223957
268 Ga0065707_10007318
269 Ga0070676_10026978
270 Ga0070683_100028594
271 Ga0070683_100083477
272 Ga0068869_100282256
273 Ga0068868_100030065
274 Ga0068868_100242781
275 Ga0070660_100113803
276 Ga0070689_100021564
277 Ga0070687_100010401
278 Ga0070687_100058156
279 Ga0070661_100019748
280 Ga0070668_100026992
281 Ga0070669_100014710
282 Ga0070675_100008983
283 Ga0070671_100122724
284 Ga0070671_100130037
285 Ga0070673_100055343
286 Ga0070673_100271060
287 Ga0070688_100127997
288 Ga0070659_100001300
289 Ga0070667_100107495
290 Ga0070709_10028802
291 Ga0070709_10030809
292 Ga0070713_100089876
293 Ga0070710_10067783
294 Ga0070711_100154126
295 Ga0070711_100160282
296 Ga0070705_100020014
297 Ga0070705_100059410
298 Ga0070705_100062200
299 Ga0070700_100007132
300 Ga0070694_100060942
301 Ga0070708_100003441
302 Ga0070708_100072619
303 Ga0070708_100143441
304 Ga0070708_100208416
305 Ga0070663_100081655
306 Ga0070678_100216458
307 Ga0070662_100077644
308 Ga0070662_100433792
309 Ga0070681_10054680
310 Ga0070685_10050534
311 Ga0070706_100001880
312 Ga0070706_100012347
313 Ga0070706_100052300
314 Ga0070706_100062559
315 Ga0070706_100078242
316 Ga0070706_100082988
317 Ga0070706_100132669
318 Ga0070706_100140124
319 Ga0070706_100165684
320 Ga0070706_100334390
321 Ga0070707_100054427
322 Ga0070707_100130316
323 Ga0070707_100145664
324 Ga0070707_100295566
325 Ga0070707_100500706
326 Ga0070698_100117488
327 Ga0070699_100054131
328 Ga0070699_100472159
329 Ga0070679_100274185
330 Ga0070684_100000230
331 Ga0070684_100007084
332 Ga0070684_100081922
333 Ga0070697_100002416
334 Ga0070697_100019669
335 Ga0070697_100040107
336 Ga0070697_100085802
337 Ga0070665_100139134
338 Ga0070665_100253521
339 Ga0070665_100416357
340 Ga0070665_100582426
341 Ga0070704_100070419
342 Ga0070664_100076652
343 Ga0070664_100151166
344 Ga0068856_100020292
345 Ga0070702_100117443
346 Ga0068859_100047205
347 Ga0068863_100443810
348 Ga0068860_100005295
349 Ga0068862_100054416
350 Ga0081455_10000902
351 Ga0081455_10001175
352 Ga0081455_10007744
353 Ga0081455_10008963
354 Ga0081455_10011019
355 Ga0081455_10056679
356 Ga0081455_10130234
357 Ga0081540_1000016
358 Ga0081540_1054550
359 Ga0081539_10006880
360 Ga0081539_10030219
361 Ga0070717_10008325
362 Ga0070717_10025294
363 Ga0070717_10030934
364 Ga0070717_10262282
365 Ga0070716_100014051
366 Ga0070712_100035973
367 Ga0075434_100201256
368 Ga0075434_100662282
369 Ga0075436_100077072
370 Ga0097620_100047205
371 Ga0099794_10102023
372 Ga0099795_10042419
373 Ga0105250_10024747
374 Ga0105245_10009380
375 Ga0105245_10119000
376 Ga0105245_10365816
377 Ga0105245_10475667
378 Ga0114129_10011678
379 Ga0114129_10298712
380 Ga0105243_10110358
381 Ga0105243_10303619
382 Ga0105248_10330390
383 Ga0105249_10036562
384 Ga0105239_10025384
385 Ga0105239_10068241
386 Ga0105239_10448756
387 Ga0105246_10112203
388 Ga0157369_10039892
389 Ga0157374_10033539
390 Ga0157374_10137817
391 Ga0157374_10189595
392 Ga0157378_10076519
393 Ga0157378_10390007
394 Ga0163162_10015322
395 Ga0163162_10170007
396 Ga0157372_10068302
397 Ga0157375_10080272
398 Ga0163163_10177568
399 Ga0157377_10025441
400 Ga0157379_10053736
401 Ga0157376_10025168
402 Ga0207673_1000713
403 Ga0207697_10001007
404 Ga0207697_10001031
405 Ga0207697_10001517
406 Ga0207697_10001601
407 Ga0207697_10005670
408 Ga0207710_10137687
409 Ga0207680_10099938
410 Ga0207699_10065880
411 Ga0207699_10134508
412 Ga0207645_10005389
413 Ga0207684_10000885
414 Ga0207684_10005595
415 Ga0207684_10051949
416 Ga0207684_10091504
417 Ga0207684_10166885
418 Ga0207684_10446921
419 Ga0207707_10093936
420 Ga0207693_10001628
421 Ga0207693_10013153
422 Ga0207693_10021558
423 Ga0207693_10159162
424 Ga0207663_10068545
425 Ga0207663_10109154
426 Ga0207662_10073881
427 Ga0207657_10096182
428 Ga0207646_10002096
429 Ga0207646_10031220
430 Ga0207646_10043530
431 Ga0207646_10102013
432 Ga0207646_10194184
433 Ga0207681_10261254
434 Ga0207659_10032030
435 Ga0207659_10181606
436 Ga0207664_10043474
437 Ga0207664_10124139
438 Ga0207644_10058979
439 Ga0207644_10317509
440 Ga0207690_10058936
441 Ga0207706_10003056
442 Ga0207706_10083084
443 Ga0207706_10098784
444 Ga0207670_10197470
445 Ga0207665_10262597
446 Ga0207661_10063231
447 Ga0207679_10110471
448 Ga0207679_10190048
449 Ga0207712_10025304
450 Ga0207668_10037090
451 Ga0207658_10031216
452 Ga0207678_10001436
453 Ga0207708_10026697
454 Ga0207676_10252183
455 Ga0207675_100037435
456 Ga0207683_10145539
457 Ga0268266_10021135
458 Ga0268265_10025996
459 Ga0373956_0181400
460 Ga0373943_0130884
461 Ga0373955_0050174
462 Ga0373935_0012595
463 Ga0373947_0007529
464 Ga0373937_0084557
465 Ga0395899_0087898
466 Ga0395900_0002775
467 Ga0395900_0312376
468 Ga0395898_0195632
469 Ga0395901_0000761
470 Ga0451576_0400465
471 Ga0495592_0005860
472 Ga0495629_0085626
473 Ga0495629_0115700
474 Ga0495582_0161932
475 Ga0495584_0163143
476 Ga0495608_0170042
477 Ga0495618_0081608
478 Ga0495628_0029460
479 Ga0495652_0056559
480 Ga0495587_0012445
481 Ga0495645_0023948
482 Ga0495623_0018437
483 Ga0495646_0005107
484 Ga0495604_0015893
485 Ga0495604_0162699
486 Ga0495674_0108325
487 Ga0495680_0221619
488 Ga0495675_0051853
489 Ga0495684_0210836
490 Ga0495602_0044869
491 Ga0496101_0185820
492 Ga0496101_0429138
493 Ga0496103_0193200
494 Ga0496105_0170916
495 Ga0496107_0160348
496 Ga0496107_0168687
497 Ga0496108_0023774
498 Ga0496109_0028913
499 Ga0496109_0528538
500 Ga0496111_0213670
501 Ga0496112_0060154
502 Ga0496113_0091302
503 Ga0496114_0202134
504 Ga0496115_0086564
505 nmdc:mga05p37_19025_c1
506 nmdc:mga08y16_113971_c1
507 nmdc:mga0n895_378133_c1
508 Ga0495601_0027251
509 Ga0495612_0029703
510 Ga0495655_0030583

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03279

Lip_A_acyltrans

Bacterial lipid A biosynthesis acyltransferase

25

315

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5f34-assembly1.cif.gz_A crystal structure of membrane associated pata from mycobacterium smegmatis in complex with s-hexadecyl coenzyme a - p21 space group 0.8473 53 285
5kn7-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii 0.8179 35 287
5knk-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii with catalytic residue substitution (e127a) 0.803 35 297
5f34-assembly1.cif.gz_A crystal structure of membrane associated pata from mycobacterium smegmatis in complex with s-hexadecyl coenzyme a - p21 space group 0.7798 53 285
5knk-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii with catalytic residue substitution (e127a) 0.6795 35 297
ID Description Score Start End Superfamily
5l3rC02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6015 121 196 3.40.50.300
2l82A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.5925 121 236 3.40.50.11230
4airB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.5494 118 196 3.40.50.1100
4qysA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.5488 121 201 3.40.50.1100
4jbnB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.5325 97 196 3.40.50.1100
ID Description Score Start End GO Terms
AF-A0A177Q8G9-F1-model_v4 deleted 0.94 1 287
AF-A0A2V5JNX6-F1-model_v4 Lipid A biosynthesis acyltransferase 0.9357 1 223 GO:0005886
GO:0009247
GO:0016746
AF-A0A534SRS8-F1-model_v4 Lipid A biosynthesis acyltransferase 0.9315 9 156 GO:0005886
GO:0009247
GO:0016746
AF-A0A7V9ETD7-F1-model_v4 Lipid A biosynthesis acyltransferase 0.9297 1 197 GO:0005886
GO:0009247
GO:0016746
AF-A0A7C5QHL3-F1-model_v4 Lysophospholipid acyltransferase family protein 0.9296 3 287 GO:0005886
GO:0009247
GO:0016746

Map