F365284

General Info

Members Datasets Scaffolds Average Seq Length
254 184 506 405

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2515154155|2515851490
Length 448
Sequence SDVRTAVADAHRRGWALALAATARVARDLDLAEECVQEAYAAALVSWVRDGIPKTPVAWLTTIAKRRAMDAVRREQVFRSKLPLLVESEAMEPEEFAPEEFAANEMAGEPAPHQPAAGEPAAGEPALGEPGDDVVPDERLRLIFLCCHPALAQDAQMALTLRLVCGVSTRDIARTFLLSEPTMAARMTRAKKKITAARIPYRVPGAAELPDRLSAVLGVIHLLFTTGHTAPSGAALVRSDLVDQALHLARMLRELMPDEREVWGLLALLLVTDARRATRVDTQGRLLRLEEQDRSRWDRAAIAEAHDLIVDGLRGGRPGRYVLQAAIASLYAEAPAYEQTDWPQILTLYDELLRIWPSPVVALNRTVAMARVHGPMRALAEVEELERAGQLAGYHYLPAVKADLLRRLGRTNDAALAYRQALELAQNDAERDFLAARLAERLAGPDHP

Samples

Sample ID Description Type Environment
1 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
4 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
33 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
84 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
85 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
86 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
87 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
88 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
89 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
90 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
96 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
97 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
98 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
99 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
100 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
101 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
102 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
103 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
110 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
111 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
112 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
113 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
114 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
115 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
116 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
117 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
118 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
121 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
122 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
123 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
124 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
125 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
126 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
127 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
128 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
129 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
130 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
131 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
132 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
133 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
134 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
135 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
136 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
139 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
140 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
141 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
142 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
143 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
144 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
145 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
146 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
147 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
148 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
149 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
150 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
151 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
152 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
153 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
154 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
155 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
156 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
157 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
158 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
159 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
160 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
161 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
164 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
165 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
168 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
169 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
170 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
174 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
175 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
176 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
177 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
178 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
179 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
180 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
181 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
182 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
183 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
184 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.64
Metatranscriptomes 0
Isolates 2.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.57
Nodule 0.39
Rhizoplane 1.97
Rhizosphere 90.94
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10000287 3300002459 Bacteria 19440
2 Ga0070683_100045343 3300005329 Bacteria 4057
3 Ga0070661_100023967 3300005344 Bacteria 4378
4 Ga0070692_10032257 3300005345 Bacteria 2633
5 Ga0070668_100000897 3300005347 Bacteria 20719
6 Ga0070668_100076738 3300005347 Bacteria 2611
7 Ga0070675_100156058 3300005354 Bacteria 1960
8 Ga0070659_100039116 3300005366 Bacteria 3701
9 Ga0070659_100225262 3300005366 Bacteria 1549
10 Ga0070705_100095686 3300005440 Bacteria 1863
11 Ga0070694_100009386 3300005444 Bacteria 6006
12 Ga0070708_100070800 3300005445 Bacteria 3138
13 Ga0070663_100048585 3300005455 Bacteria 3009
14 Ga0070706_100015397 3300005467 Bacteria 7063
15 Ga0070707_100080839 3300005468 Bacteria 3137
16 Ga0070698_100004529 3300005471 Bacteria 15269
17 Ga0070698_100051574 3300005471 Bacteria 4190
18 Ga0070699_100243984 3300005518 Bacteria 1604
19 Ga0070684_100002693 3300005535 Bacteria 13121
20 Ga0070684_100045513 3300005535 Bacteria 3800
21 Ga0070697_100165183 3300005536 Bacteria 1872
22 Ga0070695_100006604 3300005545 Bacteria 6855
23 Ga0070696_100008127 3300005546 Bacteria 7017
24 Ga0070696_100079558 3300005546 Bacteria 2319
25 Ga0070665_100277006 3300005548 Bacteria 1679
26 Ga0070704_100002590 3300005549 Bacteria 10197
27 Ga0068855_100076084 3300005563 Bacteria 3896
28 Ga0070664_100003752 3300005564 Bacteria 12255
29 Ga0068854_100001139 3300005578 Bacteria 15971
30 Ga0068856_100164011 3300005614 Bacteria 2233
31 Ga0068852_100008718 3300005616 Bacteria 7496
32 Ga0068852_100029384 3300005616 Bacteria 4516
33 Ga0068861_100013846 3300005719 Bacteria 5652
34 Ga0068870_10046893 3300005840 Bacteria 2268
35 Ga0068863_100010711 3300005841 Bacteria 8906
36 Ga0068862_100002978 3300005844 Bacteria 14793
37 Ga0081455_10000849 3300005937 Bacteria 39353
38 Ga0081455_10030042 3300005937 Bacteria 4945
39 Ga0081455_10059499 3300005937 Bacteria 3226
40 Ga0081455_10125470 3300005937 Bacteria 2015
41 Ga0081538_10011908 3300005981 Bacteria 7018
42 Ga0081538_10012104 3300005981 Bacteria 6938
43 Ga0081540_1002089 3300005983 Bacteria 16651
44 Ga0070717_10079021 3300006028 Bacteria 2758
45 Ga0075432_10003807 3300006058 Bacteria 5141
46 Ga0075428_100000658 3300006844 Bacteria 35511
47 Ga0075428_100021141 3300006844 Bacteria 7207
48 Ga0075428_100334277 3300006844 Bacteria 1627
49 Ga0075430_100000408 3300006846 Bacteria 31936
50 Ga0075430_100017421 3300006846 Bacteria 6118
51 Ga0075430_100048562 3300006846 Bacteria 3583
52 Ga0075430_100162600 3300006846 Bacteria 1858
53 Ga0075431_100000386 3300006847 Bacteria 35302
54 Ga0075431_100000530 3300006847 Bacteria 31979
55 Ga0075433_10156102 3300006852 Bacteria 2030
56 Ga0075434_100008370 3300006871 Bacteria 9613
57 Ga0075429_100000115 3300006880 Bacteria 46097
58 Ga0075429_100002723 3300006880 Bacteria 14917
59 Ga0105240_10138981 3300009093 Bacteria 2906
60 Ga0111539_10056264 3300009094 Bacteria 4675
61 Ga0105245_10097339 3300009098 Bacteria 2717
62 Ga0105245_10105617 3300009098 Bacteria 2612
63 Ga0114129_10000014 3300009147 Bacteria 130267
64 Ga0114129_10000963 3300009147 Bacteria 37593
65 Ga0114129_10038138 3300009147 Bacteria 6781
66 Ga0114129_10040227 3300009147 Bacteria 6590
67 Ga0105243_10005799 3300009148 Bacteria 9584
68 Ga0105243_10031442 3300009148 Bacteria 4093
69 Ga0105243_10393687 3300009148 Bacteria 1285
70 Ga0105241_10022865 3300009174 Bacteria 4634
71 Ga0105242_10066610 3300009176 Bacteria 2975
72 Ga0105237_10014834 3300009545 Bacteria 8132
73 Ga0105237_10124670 3300009545 Bacteria 2570
74 Ga0105238_10010265 3300009551 Bacteria 9393
75 Ga0105249_10068079 3300009553 Bacteria 3282
76 Ga0105249_10103174 3300009553 Bacteria 2685
77 Ga0105032_100332 3300009979 Bacteria 4842
78 Ga0105239_10073771 3300010375 Bacteria 3751
79 Ga0157378_10210704 3300013297 Bacteria 1842
80 Ga0157375_10104427 3300013308 Bacteria 2922
81 Ga0163163_10081725 3300014325 Bacteria 3233
82 Ga0207647_10004605 3300025904 Bacteria 10215
83 Ga0207643_10000076 3300025908 Bacteria 64527
84 Ga0207684_10035012 3300025910 Bacteria 4264
85 Ga0207684_10135753 3300025910 Bacteria 2113
86 Ga0207654_10033648 3300025911 Bacteria 2843
87 Ga0207695_10000062 3300025913 Bacteria 351979
88 Ga0207695_10065568 3300025913 Bacteria 3734
89 Ga0207671_10000269 3300025914 Bacteria 77455
90 Ga0207693_10100401 3300025915 Bacteria 2269
91 Ga0207649_10054473 3300025920 Bacteria 2489
92 Ga0207646_10066175 3300025922 Bacteria 3226
93 Ga0207646_10067713 3300025922 Bacteria 3188
94 Ga0207646_10126497 3300025922 Bacteria 2298
95 Ga0207694_10009230 3300025924 Bacteria 7442
96 Ga0207650_10020464 3300025925 Bacteria 4667
97 Ga0207659_10132345 3300025926 Bacteria 1927
98 Ga0207687_10013648 3300025927 Bacteria 5303
99 Ga0207709_10009516 3300025935 Bacteria 5347
100 Ga0207679_10153960 3300025945 Bacteria 1875
101 Ga0207712_10043439 3300025961 Bacteria 3101
102 Ga0207712_10056717 3300025961 Bacteria 2760
103 Ga0207712_10173434 3300025961 Bacteria 1688
104 Ga0207668_10000969 3300025972 Bacteria 17239
105 Ga0207678_10047691 3300026067 Bacteria 3704
106 Ga0207708_10003124 3300026075 Bacteria 12190
107 Ga0207702_10126165 3300026078 Bacteria 2298
108 Ga0207641_10046913 3300026088 Bacteria 3642
109 Ga0207676_10053154 3300026095 Bacteria 3170
110 Ga0207676_10380635 3300026095 Bacteria 1313
111 Ga0207674_10000959 3300026116 Bacteria 37695
112 Ga0207674_10147659 3300026116 Bacteria 2309
113 Ga0207675_100010810 3300026118 Bacteria 8553
114 Ga0207428_10028963 3300027907 Bacteria 4595
115 Ga0268265_10015907 3300028380 Bacteria 5160
116 Ga0307515_10192369 3300028794 Bacteria 1945
117 Ga0307512_10035401 3300030522 Bacteria 4255
118 Ga0307509_10212088 3300031507 Bacteria 1760
119 Ga0307508_10009893 3300031616 Bacteria 8741
120 Ga0307516_10002955 3300031730 Bacteria 22255
121 Ga0307516_10008463 3300031730 Bacteria 11640
122 Ga0307405_10022083 3300031731 Bacteria 3591
123 Ga0307406_10005876 3300031901 Bacteria 6732
124 Ga0307407_10046891 3300031903 Bacteria 2449
125 Ga0307407_10170360 3300031903 Bacteria 1433
126 Ga0307412_10075950 3300031911 Bacteria 2307
127 Ga0307409_100055333 3300031995 Bacteria 3062
128 Ga0307416_100222506 3300032002 Bacteria 1811
129 Ga0307415_100002300 3300032126 Bacteria 9476
130 Ga0307415_100271242 3300032126 Bacteria 1390
131 Ga0307507_10014746 3300033179 Bacteria 9282
132 Ga0373934_0014469 3300035086 Bacteria 2990
133 Ga0373949_0023874 3300035090 Bacteria 1419
134 Ga0373951_0000311 3300035091 Bacteria 15390
135 Ga0373932_0027230 3300035112 Bacteria 1562
136 Ga0373957_0058959 3300035120 Bacteria 1484
137 Ga0373962_0023098 3300035242 Bacteria 1654
138 Ga0373927_0034947 3300035695 Bacteria 3268
139 Ga0373933_0018517 3300035724 Bacteria 3917
140 Ga0395899_0035043 3300037312 Bacteria 3768
141 Ga0395900_0001569 3300037418 Bacteria 27058
142 Ga0395900_0117489 3300037418 Bacteria 2729
143 Ga0395898_0007400 3300037466 Bacteria 11652
144 Ga0395898_0013651 3300037466 Bacteria 8359
145 Ga0395898_0050513 3300037466 Bacteria 4069
146 Ga0395898_0219414 3300037466 Bacteria 1814
147 Ga0395905_0021894 3300037471 Bacteria 6045
148 Ga0395905_0078861 3300037471 Bacteria 3086
149 Ga0395905_0333972 3300037471 Bacteria 1406
150 Ga0395901_0002227 3300038443 Bacteria 19792
151 Ga0395901_0008707 3300038443 Bacteria 10256
152 Ga0395901_0015402 3300038443 Bacteria 7785
153 Ga0395901_0114595 3300038443 Bacteria 2831
154 Ga0466970_0064168 3300044765 Bacteria 1969
155 Ga0466958_0003981 3300045836 Bacteria 7742
156 Ga0495592_0006032 3300046454 Bacteria 9007
157 Ga0495592_0085011 3300046454 Bacteria 2281
158 Ga0495603_0009802 3300046455 Bacteria 5796
159 Ga0495629_0029942 3300046459 Bacteria 3859
160 Ga0495651_0013283 3300046462 Bacteria 6369
161 Ga0495651_0025064 3300046462 Bacteria 4640
162 Ga0495651_0035048 3300046462 Bacteria 3910
163 Ga0495639_0002936 3300046475 Bacteria 7420
164 Ga0495662_0002700 3300046476 Bacteria 8970
165 Ga0495662_0004074 3300046476 Bacteria 7357
166 Ga0495664_0011251 3300046477 Bacteria 5041
167 Ga0495584_0027109 3300046491 Bacteria 2904
168 Ga0495606_0001366 3300046507 Bacteria 33028
169 Ga0495618_0046926 3300046514 Bacteria 2726
170 Ga0495620_0017465 3300046515 Bacteria 3576
171 Ga0495628_0152698 3300046516 Bacteria 1758
172 Ga0495630_0012805 3300046517 Bacteria 6095
173 Ga0495631_0025693 3300046518 Bacteria 2709
174 Ga0495652_0001926 3300046529 Bacteria 22065
175 Ga0495665_0072118 3300046531 Bacteria 1819
176 Ga0495640_0018429 3300046533 Bacteria 5175
177 Ga0495587_0010149 3300046536 Bacteria 6007
178 Ga0495598_0036266 3300046537 Bacteria 1416
179 Ga0495645_0012335 3300046543 Bacteria 6020
180 Ga0495622_0023087 3300046557 Bacteria 2900
181 Ga0495667_0011203 3300046559 Bacteria 6071
182 Ga0495668_0000924 3300046616 Bacteria 32766
183 Ga0495634_0033298 3300046642 Bacteria 3541
184 Ga0495611_0096982 3300046648 Bacteria 1366
185 Ga0495625_0002156 3300046660 Bacteria 21891
186 Ga0495635_0016033 3300046663 Bacteria 5233
187 Ga0495657_0004361 3300046675 Bacteria 11293
188 Ga0495657_0015574 3300046675 Bacteria 5558
189 Ga0495599_0065223 3300046678 Bacteria 2275
190 Ga0495646_0032884 3300046680 Bacteria 3225
191 Ga0495646_0033812 3300046680 Bacteria 3178
192 Ga0495613_0017688 3300046689 Bacteria 5311
193 Ga0495613_0100667 3300046689 Bacteria 2087
194 Ga0495649_0015734 3300046694 Bacteria 4301
195 Ga0495589_0014387 3300046794 Bacteria 4076
196 Ga0495600_0034940 3300046809 Bacteria 3263
197 Ga0495600_0099307 3300046809 Bacteria 1897
198 Ga0495600_0117753 3300046809 Bacteria 1728
199 Ga0495581_0063195 3300047315 Bacteria 2139
200 Ga0495604_0020366 3300047317 Bacteria 5298
201 Ga0495604_0031120 3300047317 Bacteria 4235
202 Ga0495636_0009929 3300047318 Bacteria 3749
203 Ga0495674_0032218 3300047319 Bacteria 4756
204 Ga0495680_0021364 3300047322 Bacteria 5420
205 Ga0495683_0027449 3300047323 Bacteria 2911
206 Ga0495687_021092 3300047443 Bacteria 3162
207 Ga0495687_024995 3300047443 Bacteria 2830
208 Ga0495675_0010158 3300047444 Bacteria 5870
209 Ga0495675_0025130 3300047444 Bacteria 3799
210 Ga0495684_0001689 3300047471 Bacteria 17742
211 Ga0495602_0011198 3300048088 Bacteria 9273
212 Ga0495602_0029221 3300048088 Bacteria 5256
213 Ga0495602_0100856 3300048088 Bacteria 2369
214 Ga0495626_0000130 3300048091 Bacteria 95069
215 Ga0496106_0009733 3300048909 Bacteria 7098
216 Ga0496108_0062569 3300048911 Bacteria 3134
217 Ga0496109_0018646 3300048912 Bacteria 6098
218 Ga0496109_0020689 3300048912 Bacteria 5812
219 Ga0496111_0219906 3300048914 Bacteria 1411
220 Ga0496117_0006544 3300048920 Bacteria 11729
221 Ga0496118_0003970 3300048921 Bacteria 18053
222 Ga0496121_0000476 3300048924 Bacteria 78015
223 Ga0496124_0001128 3300048927 Bacteria 42017
224 Ga0496126_0008777 3300048929 Bacteria 10850
225 Ga0496126_0139274 3300048929 Bacteria 2090
226 Ga0501042_0004137 3300049578 Bacteria 9224
227 Ga0501080_0021174 3300049742 Bacteria 6018
228 nmdc:mga05p37_171137_c1 3300050507 Bacteria 2649
229 nmdc:mga05p37_44194_c1 3300050507 Bacteria 5481
230 nmdc:mga05p37_554_c1 3300050507 Bacteria 41106
231 nmdc:mga05p37_8206_c1 3300050507 Bacteria 12349
232 nmdc:mga09592_38076_c1 3300050508 Bacteria 4036
233 nmdc:mga09592_5400_c1 3300050508 Bacteria 10392
234 nmdc:mga0qj67_3013_c1 3300050509 Bacteria 12105
235 nmdc:mga0qj67_34949_c1 3300050509 Bacteria 3928
236 nmdc:mga06r32_1339_c1 3300050510 Bacteria 22226
237 nmdc:mga06r32_15029_c1 3300050510 Bacteria 7028
238 nmdc:mga06r32_152403_c1 3300050510 Bacteria 2291
239 nmdc:mga08y16_197193_c1 3300050511 Bacteria 2087
240 nmdc:mga08y16_40204_c1 3300050511 Bacteria 4903
241 nmdc:mga0n895_313861_c1 3300050512 Bacteria 1589
242 nmdc:mga0a205_15243_c1 3300050515 Bacteria 7182
243 Ga0500573_0002307 3300053140 Bacteria 9486
244 Ga0500636_0020748 3300053177 Bacteria 3888
245 Ga0500552_001946 3300053733 Bacteria 1987
246 Ga0500596_002790 3300053735 Bacteria 3415
247 Ga0466962_0009374 3300061719 Bacteria 4692
248 2515851490 2515154155 Bacteria 7985436
249 2616700918 2616644814 Bacteria 11555299
250 2676478824 2675903058 Bacteria 6822861
251 2827634266 2827628540 Bacteria 6858585
252 2879101338 2879099564 Bacteria 10442239
253 8001782733 8001781756 Bacteria 9586736
254 JGI24751J29686_10000287
255 Ga0070683_100045343
256 Ga0070661_100023967
257 Ga0070692_10032257
258 Ga0070668_100000897
259 Ga0070668_100076738
260 Ga0070675_100156058
261 Ga0070659_100039116
262 Ga0070659_100225262
263 Ga0070705_100095686
264 Ga0070694_100009386
265 Ga0070708_100070800
266 Ga0070663_100048585
267 Ga0070706_100015397
268 Ga0070707_100080839
269 Ga0070698_100004529
270 Ga0070698_100051574
271 Ga0070699_100243984
272 Ga0070684_100002693
273 Ga0070684_100045513
274 Ga0070697_100165183
275 Ga0070695_100006604
276 Ga0070696_100008127
277 Ga0070696_100079558
278 Ga0070665_100277006
279 Ga0070704_100002590
280 Ga0068855_100076084
281 Ga0070664_100003752
282 Ga0068854_100001139
283 Ga0068856_100164011
284 Ga0068852_100008718
285 Ga0068852_100029384
286 Ga0068861_100013846
287 Ga0068870_10046893
288 Ga0068863_100010711
289 Ga0068862_100002978
290 Ga0081455_10000849
291 Ga0081455_10030042
292 Ga0081455_10059499
293 Ga0081455_10125470
294 Ga0081538_10011908
295 Ga0081538_10012104
296 Ga0081540_1002089
297 Ga0070717_10079021
298 Ga0075432_10003807
299 Ga0075428_100000658
300 Ga0075428_100021141
301 Ga0075428_100334277
302 Ga0075430_100000408
303 Ga0075430_100017421
304 Ga0075430_100048562
305 Ga0075430_100162600
306 Ga0075431_100000386
307 Ga0075431_100000530
308 Ga0075433_10156102
309 Ga0075434_100008370
310 Ga0075429_100000115
311 Ga0075429_100002723
312 Ga0105240_10138981
313 Ga0111539_10056264
314 Ga0105245_10097339
315 Ga0105245_10105617
316 Ga0114129_10000014
317 Ga0114129_10000963
318 Ga0114129_10038138
319 Ga0114129_10040227
320 Ga0105243_10005799
321 Ga0105243_10031442
322 Ga0105243_10393687
323 Ga0105241_10022865
324 Ga0105242_10066610
325 Ga0105237_10014834
326 Ga0105237_10124670
327 Ga0105238_10010265
328 Ga0105249_10068079
329 Ga0105249_10103174
330 Ga0105032_100332
331 Ga0105239_10073771
332 Ga0157378_10210704
333 Ga0157375_10104427
334 Ga0163163_10081725
335 Ga0207647_10004605
336 Ga0207643_10000076
337 Ga0207684_10035012
338 Ga0207684_10135753
339 Ga0207654_10033648
340 Ga0207695_10000062
341 Ga0207695_10065568
342 Ga0207671_10000269
343 Ga0207693_10100401
344 Ga0207649_10054473
345 Ga0207646_10066175
346 Ga0207646_10067713
347 Ga0207646_10126497
348 Ga0207694_10009230
349 Ga0207650_10020464
350 Ga0207659_10132345
351 Ga0207687_10013648
352 Ga0207709_10009516
353 Ga0207679_10153960
354 Ga0207712_10043439
355 Ga0207712_10056717
356 Ga0207712_10173434
357 Ga0207668_10000969
358 Ga0207678_10047691
359 Ga0207708_10003124
360 Ga0207702_10126165
361 Ga0207641_10046913
362 Ga0207676_10053154
363 Ga0207676_10380635
364 Ga0207674_10000959
365 Ga0207674_10147659
366 Ga0207675_100010810
367 Ga0207428_10028963
368 Ga0268265_10015907
369 Ga0307515_10192369
370 Ga0307512_10035401
371 Ga0307509_10212088
372 Ga0307508_10009893
373 Ga0307516_10002955
374 Ga0307516_10008463
375 Ga0307405_10022083
376 Ga0307406_10005876
377 Ga0307407_10046891
378 Ga0307407_10170360
379 Ga0307412_10075950
380 Ga0307409_100055333
381 Ga0307416_100222506
382 Ga0307415_100002300
383 Ga0307415_100271242
384 Ga0307507_10014746
385 Ga0373934_0014469
386 Ga0373949_0023874
387 Ga0373951_0000311
388 Ga0373932_0027230
389 Ga0373957_0058959
390 Ga0373962_0023098
391 Ga0373927_0034947
392 Ga0373933_0018517
393 Ga0395899_0035043
394 Ga0395900_0001569
395 Ga0395900_0117489
396 Ga0395898_0007400
397 Ga0395898_0013651
398 Ga0395898_0050513
399 Ga0395898_0219414
400 Ga0395905_0021894
401 Ga0395905_0078861
402 Ga0395905_0333972
403 Ga0395901_0002227
404 Ga0395901_0008707
405 Ga0395901_0015402
406 Ga0395901_0114595
407 Ga0466970_0064168
408 Ga0466958_0003981
409 Ga0495592_0006032
410 Ga0495592_0085011
411 Ga0495603_0009802
412 Ga0495629_0029942
413 Ga0495651_0013283
414 Ga0495651_0025064
415 Ga0495651_0035048
416 Ga0495639_0002936
417 Ga0495662_0002700
418 Ga0495662_0004074
419 Ga0495664_0011251
420 Ga0495584_0027109
421 Ga0495606_0001366
422 Ga0495618_0046926
423 Ga0495620_0017465
424 Ga0495628_0152698
425 Ga0495630_0012805
426 Ga0495631_0025693
427 Ga0495652_0001926
428 Ga0495665_0072118
429 Ga0495640_0018429
430 Ga0495587_0010149
431 Ga0495598_0036266
432 Ga0495645_0012335
433 Ga0495622_0023087
434 Ga0495667_0011203
435 Ga0495668_0000924
436 Ga0495634_0033298
437 Ga0495611_0096982
438 Ga0495625_0002156
439 Ga0495635_0016033
440 Ga0495657_0004361
441 Ga0495657_0015574
442 Ga0495599_0065223
443 Ga0495646_0032884
444 Ga0495646_0033812
445 Ga0495613_0017688
446 Ga0495613_0100667
447 Ga0495649_0015734
448 Ga0495589_0014387
449 Ga0495600_0034940
450 Ga0495600_0099307
451 Ga0495600_0117753
452 Ga0495581_0063195
453 Ga0495604_0020366
454 Ga0495604_0031120
455 Ga0495636_0009929
456 Ga0495674_0032218
457 Ga0495680_0021364
458 Ga0495683_0027449
459 Ga0495687_021092
460 Ga0495687_024995
461 Ga0495675_0010158
462 Ga0495675_0025130
463 Ga0495684_0001689
464 Ga0495602_0011198
465 Ga0495602_0029221
466 Ga0495602_0100856
467 Ga0495626_0000130
468 Ga0496106_0009733
469 Ga0496108_0062569
470 Ga0496109_0018646
471 Ga0496109_0020689
472 Ga0496111_0219906
473 Ga0496117_0006544
474 Ga0496118_0003970
475 Ga0496121_0000476
476 Ga0496124_0001128
477 Ga0496126_0008777
478 Ga0496126_0139274
479 Ga0501042_0004137
480 Ga0501080_0021174
481 nmdc:mga05p37_171137_c1
482 nmdc:mga05p37_44194_c1
483 nmdc:mga05p37_554_c1
484 nmdc:mga05p37_8206_c1
485 nmdc:mga09592_38076_c1
486 nmdc:mga09592_5400_c1
487 nmdc:mga0qj67_3013_c1
488 nmdc:mga0qj67_34949_c1
489 nmdc:mga06r32_1339_c1
490 nmdc:mga06r32_15029_c1
491 nmdc:mga06r32_152403_c1
492 nmdc:mga08y16_197193_c1
493 nmdc:mga08y16_40204_c1
494 nmdc:mga0n895_313861_c1
495 nmdc:mga0a205_15243_c1
496 Ga0500573_0002307
497 Ga0500636_0020748
498 Ga0500552_001946
499 Ga0500596_002790
500 Ga0466962_0009374
501 2515851490
502 2616700918
503 2676478824
504 2827634266
505 2879101338
506 8001782733

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20239

DUF6596

Family of unknown function (DUF6596)

212

312

0.98

PF08281

Sigma70_r4_2

Sigma-70, region 4

141

194

0.96

PF04542

Sigma70_r2

Sigma-70 region 2

11

77

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o8x-assembly1.cif.gz_B "crystal structure of the ""-35 element"" promoter recognition domain of mycobacterium tuberculosis sigc" 0.8493 105 159
3vfz-assembly3.cif.gz_A crystal structure of -35 promoter binding domain of sigd of mycobacterium tuberculosis 0.837 102 162
3hug-assembly2.cif.gz_E crystal structure of mycobacterium tuberculosis anti-sigma factor rsla in complex with -35 promoter binding domain of sigl 0.8355 105 161
3hug-assembly6.cif.gz_M crystal structure of mycobacterium tuberculosis anti-sigma factor rsla in complex with -35 promoter binding domain of sigl 0.8336 105 161
3hug-assembly1.cif.gz_C crystal structure of mycobacterium tuberculosis anti-sigma factor rsla in complex with -35 promoter binding domain of sigl 0.8324 105 161
ID Description Score Start End Superfamily
af_A0A1D6KFP0_116_204_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8705 324 406 1.25.40.10
af_Q4DF91_471_692_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8669 307 406 1.25.40.10
af_A0A1D6HKP2_180_283_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8498 324 406 1.25.40.10
af_Q2QMH0_13_127_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8484 306 406 1.25.40.10
af_Q23544_129_233_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8477 324 406 1.25.40.10
ID Description Score Start End GO Terms
AF-W7V968-F1-model_v4 deleted 0.9928 235 406
AF-A0A4V2Y1D2-F1-model_v4 DUF6596 domain-containing protein 0.988 212 407
AF-A0A7Y5JWR8-F1-model_v4 RNA polymerase sigma factor 0.9827 105 405 GO:0003677
GO:0006352
GO:0016987
AF-A0A5B0B122-F1-model_v4 RNA polymerase sigma factor 0.9794 116 407 GO:0003677
GO:0006352
GO:0016987
AF-A0A0K8PHD4-F1-model_v4 RNA polymerase ECF-subfamily sigma factor 0.9793 235 406

Map