F365274

General Info

Members Datasets Scaffolds Average Seq Length
254 181 225 449

Family's Representative Sequence

Representative Sequence 3300059424|Ga0590075_002085|Ga0590075_002085_686_2233
Length 515
Sequence MRLRHYPGPAQEEHCNQKDSVRPTPPGRACGTKRRARAPLTPPPRGITLPRSAITVRISESSPAPRPALFGIAWPIFAEFLLGMTVGAVGLWLAARDSDTAAGAFSLANHLMAALFILFRVVGIGVSVVITQNLGAGRRDEADAVARAGLGASTWMGLGVALVTVVAAEPLLKLMSAPPEVLPLATPFLQVLAVALALDAYNASMASVMRAHLHGRDTLFVMVGMHAVHLLLAAPLMRGSGPLPALGLIGFAVALAASRAAGLAMHLWLWSLRLNLTPQRADWWRLPARQINAVLHIGLPGAAENIAYRVAFMVSVAVAARMGAGALATQSYALQVMYYVLLFGLATGFASEILVGHMIGAGRLHEAHRLVRRNLAWGLGVSTTMALLAALAAPWVLRLFTQDDAIIDAATTLLWITVLLEPGRTFNLVVINALRATGDARFPVAAGAVSMALVLAGGSWLLGATLGLGLVGVWIAYTADEWLRGLLMWWRWERHGWVRHARATHRKLRAARQGT

Samples

Sample ID Description Type Environment
1 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
2 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
3 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
4 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
5 2643221585 Pelomonas sp. Root662 Isolate Unclassified
6 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
7 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
8 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
9 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
10 2643221645 Massilia sp. Root351 Isolate Unclassified
11 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
12 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
13 2643221656 Pelomonas sp. Root405 Isolate Unclassified
14 2643221664 Massilia sp. Root418 Isolate Unclassified
15 2738541280 Massilia sp. GV090 Isolate Unclassified
16 2738541297 Duganella sp. GV083 Isolate Unclassified
17 2738541300 Massilia sp. GV016 Isolate Unclassified
18 2738541337 Pelomonas sp. BT06 Isolate Unclassified
19 2738541357 Duganella sp. GV053 Isolate Unclassified
20 2738543003 Duganella sp. GV066 Isolate Unclassified
21 2738543018 Massilia sp. GV045 Isolate Unclassified
22 2738543026 Duganella sp. GV089 Isolate Unclassified
23 2738543029 Duganella sp. GV039 Isolate Unclassified
24 2738543030 Massilia sp. GV097 Isolate Unclassified
25 2857564685 Duganella sp. R-74599 Isolate Unclassified
26 2904424332 Duganella sp. 1411 Isolate Rhizosphere
27 2919493220 Aeromonas salmonicida salmonicida 3466 Isolate Unclassified
28 2919543075 Aeromonas salmonicida masoucida 4076 Isolate Unclassified
29 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
30 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
31 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
32 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
33 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
34 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
35 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
36 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
37 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
38 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
39 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
40 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
41 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
42 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
43 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
44 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
45 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
46 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
47 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
50 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
51 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
52 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
59 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
62 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
63 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
65 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
66 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
68 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
83 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
84 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
85 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
86 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
87 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
88 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
89 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
90 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
91 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
92 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
93 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
94 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
95 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
96 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
97 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
98 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
99 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
100 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
106 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
107 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
108 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
109 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
110 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
111 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
112 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
113 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
114 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
115 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
116 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
117 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
120 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
121 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
122 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
123 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
124 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
125 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
126 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
127 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
128 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
129 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
130 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
131 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
132 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
133 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
134 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
135 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
136 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
137 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
138 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
139 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
140 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
141 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
142 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
143 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
144 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
145 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
146 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
147 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
148 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
149 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
150 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
151 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
152 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
153 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
154 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
155 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
156 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
157 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
158 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
159 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
160 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
161 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
162 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
163 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
164 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
165 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
166 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
167 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
168 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
169 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
170 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
171 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
172 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
173 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
174 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
175 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
176 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
177 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
178 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
179 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
180 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
181 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.19
Metatranscriptomes 0
Isolates 11.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.69
Nodule 1.97
Rhizoplane 0.79
Rhizosphere 59.06
Stem 0
Stem Tuber 0
Unclassified 18.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1000042 3300002705 Bacteria 105742
2 JGI25154J39366_1000487 3300002738 Bacteria 20457
3 JGI25152J39213_1001024 3300002773 Bacteria 13383
4 JGI25153J46596_10000904 3300003215 Bacteria 18024
5 JGI25153J46596_10009817 3300003215 Bacteria 4397
6 rootH1_10013038 3300003316 Bacteria 2018
7 rootH1_10013039 3300003316 Bacteria 1982
8 rootH1_10013039 3300003323 Bacteria 3203
9 rootL2_10007932 3300003322 Bacteria 28859
10 rootL2_10095628 3300003322 Bacteria 2186
11 rootL2_10137647 3300003322 Bacteria 4403
12 rootH1_10079341 3300003323 Bacteria 1956
13 rootH1_10093337 3300003323 Bacteria 2097
14 rootH1_10114379 3300003323 Bacteria 4968
15 Ga0055525_1000038 3300003759 Bacteria 297540
16 Ga0055529_1000076 3300003763 Bacteria 156104
17 Ga0055526_1000001 3300003771 Bacteria 669703
18 Ga0055526_1001136 3300003771 Bacteria 19296
19 Ga0055524_1000003 3300003775 Bacteria 399748
20 Ga0055524_1000292 3300003775 Bacteria 48340
21 Ga0055530_10002278 3300003791 Bacteria 12606
22 Ga0055530_10007662 3300003791 Bacteria 4497
23 Ga0055540_1000004 3300003792 Bacteria 395545
24 Ga0065165_1001510 3300005262 Bacteria 24595
25 Ga0070690_100001021 3300005330 Bacteria 14305
26 Ga0070659_100043752 3300005366 Bacteria 3503
27 Ga0070662_100006212 3300005457 Bacteria 7694
28 Ga0068867_100000420 3300005459 Bacteria 28323
29 Ga0068861_100083725 3300005719 Bacteria 2503
30 Ga0075370_10013526 3300006353 Bacteria 4342
31 Ga0075370_10014969 3300006353 Bacteria 4145
32 Ga0079104_1000013 3300006946 Bacteria 349477
33 Ga0079104_1000056 3300006946 Bacteria 166276
34 Ga0099826_10000002 3300006948 Bacteria 1125830
35 Ga0105244_10011911 3300009036 Bacteria 5179
36 Ga0105243_10005037 3300009148 Bacteria 10367
37 Ga0105242_10034740 3300009176 Bacteria 4042
38 Ga0105237_10000441 3300009545 Bacteria 59156
39 Ga0105239_10000417 3300010375 Bacteria 62040
40 Ga0157377_10000152 3300014745 Bacteria 42924
41 Ga0213872_10000001 3300021361 Bacteria 662532
42 Ga0213872_10000018 3300021361 Bacteria 175951
43 Ga0213872_10000743 3300021361 Bacteria 24099
44 Ga0213872_10001547 3300021361 Bacteria 14745
45 Ga0213872_10057174 3300021361 Bacteria 1766
46 Ga0209563_100005 3300025230 Bacteria 1774893
47 Ga0209258_100171 3300025242 Bacteria 145035
48 Ga0207425_1000492 3300025245 Bacteria 24718
49 Ga0207425_1001976 3300025245 Bacteria 7675
50 Ga0209646_1000023 3300025246 Bacteria 441100
51 Ga0209148_1002666 3300025254 Bacteria 5741
52 Ga0209759_1000646 3300025256 Bacteria 32493
53 Ga0209129_1000035 3300025258 Bacteria 329303
54 Ga0209455_1000073 3300025272 Bacteria 291417
55 Ga0209455_1000148 3300025272 Bacteria 131958
56 Ga0209025_1013574 3300025294 Bacteria 5104
57 Ga0209564_1000002 3300025295 Bacteria 1636803
58 Ga0209564_1000024 3300025295 Bacteria 535041
59 Ga0209758_1000066 3300025297 Bacteria 298620
60 Ga0209758_1000248 3300025297 Bacteria 110671
61 Ga0209758_1006078 3300025297 Bacteria 8886
62 Ga0209050_1000614 3300025298 Bacteria 56080
63 Ga0209050_1001157 3300025298 Bacteria 31547
64 Ga0209050_1005089 3300025298 Bacteria 8476
65 Ga0209256_1000007 3300025299 Bacteria 1136599
66 Ga0209256_1000071 3300025299 Bacteria 242618
67 Ga0209256_1000072 3300025299 Bacteria 239812
68 Ga0209051_1000016 3300025303 Bacteria 541891
69 Ga0209257_1000115 3300025304 Bacteria 230858
70 Ga0207655_1031236 3300025728 Bacteria 2458
71 Ga0207706_10001057 3300025933 Bacteria 28001
72 Ga0207709_10002662 3300025935 Bacteria 11086
73 Ga0207651_10004808 3300025960 Bacteria 6873
74 Ga0207678_10033627 3300026067 Unclassified 4465
75 Ga0207648_10001146 3300026089 Bacteria 29713
76 Ga0207675_100073408 3300026118 Bacteria 3201
77 Ga0207698_10012292 3300026142 Bacteria 5595
78 Ga0209281_1000182 3300027111 Bacteria 145698
79 Ga0209282_1000001 3300027666 Bacteria 2450367
80 Ga0265318_10000047 3300028577 Bacteria 123944
81 Ga0307517_10088245 3300028786 Bacteria 2566
82 Ga0307515_10003449 3300028794 Bacteria 33283
83 Ga0265328_10004325 3300031239 Bacteria 6175
84 Ga0265320_10012201 3300031240 Bacteria 5015
85 Ga0265331_10027495 3300031250 Bacteria 2850
86 Ga0265327_10000083 3300031251 Bacteria 204923
87 Ga0307513_10090620 3300031456 Bacteria 3118
88 Ga0265313_10013999 3300031595 Bacteria 4775
89 Ga0307514_10000390 3300031649 Bacteria 99924
90 Ga0265314_10000872 3300031711 Bacteria 35886
91 Ga0307516_10001043 3300031730 Bacteria 38525
92 Ga0307516_10002562 3300031730 Bacteria 24178
93 Ga0307405_10047237 3300031731 Bacteria 2650
94 Ga0307410_10040706 3300031852 Bacteria 3060
95 Ga0307409_100022485 3300031995 Bacteria 4349
96 Ga0373939_0000017 3300035114 Bacteria 61924
97 Ga0373960_0001199 3300035121 Bacteria 5664
98 Ga0373931_0000641 3300035691 Bacteria 14534
99 Ga0395898_0076697 3300037466 Bacteria 3227
100 Ga0395905_0000733 3300037471 Bacteria 43190
101 Ga0395905_0007042 3300037471 Bacteria 11241
102 Ga0395901_0003981 3300038443 Bacteria 14866
103 Ga0436361_0148264 3300039447 Bacteria 57652
104 Ga0436361_0316723 3300039447 Bacteria 34024
105 Ga0436361_0529332 3300039447 Bacteria 100222
106 Ga0436361_0568079 3300039447 Bacteria 13430
107 Ga0436361_0677882 3300039447 Bacteria 228834
108 Ga0436361_1161562 3300039447 Bacteria 16490
109 Ga0451793_0176012 3300041452 Bacteria 2466
110 Ga0450919_000344 3300042121 Bacteria 5591
111 Ga0450891_000395 3300042129 Bacteria 4552
112 Ga0450892_001909 3300042130 Bacteria 1861
113 Ga0450899_004330 3300042135 Bacteria 1522
114 Ga0439464_0016572 3300042439 Bacteria 1994
115 Ga0450918_000224 3300042531 Bacteria 13018
116 Ga0450918_006129 3300042531 Bacteria 2145
117 Ga0450893_0007664 3300042532 Bacteria 1754
118 Ga0451577_0001078 3300042876 Bacteria 39114
119 Ga0466969_0002772 3300044656 Bacteria 9368
120 Ga0466972_0002070 3300044658 Bacteria 9814
121 Ga0466970_0007085 3300044765 Bacteria 5609
122 Ga0451576_0000087 3300045051 Bacteria 234554
123 Ga0451576_0005339 3300045051 Bacteria 16151
124 Ga0451576_0007811 3300045051 Bacteria 12681
125 Ga0495617_000013 3300046452 Bacteria 290031
126 Ga0495590_0043444 3300046457 Bacteria 1567
127 Ga0495638_0006913 3300046460 Bacteria 8184
128 Ga0495653_0000005 3300046463 Bacteria 367438
129 Ga0495650_0000170 3300046471 Bacteria 143177
130 Ga0495650_0000698 3300046471 Bacteria 43146
131 Ga0495650_0002998 3300046471 Bacteria 12776
132 Ga0495650_0003590 3300046471 Bacteria 11196
133 Ga0495605_0000107 3300046474 Bacteria 105085
134 Ga0495605_0004192 3300046474 Bacteria 8498
135 Ga0495584_0002538 3300046491 Bacteria 10318
136 Ga0495585_0001032 3300046492 Bacteria 23174
137 Ga0495585_0065086 3300046492 Bacteria 1998
138 Ga0495607_0011133 3300046501 Bacteria 6005
139 Ga0495607_0032024 3300046501 Bacteria 3214
140 Ga0495607_0034966 3300046501 Bacteria 3044
141 Ga0495607_0116227 3300046501 Bacteria 1411
142 Ga0495583_0000067 3300046506 Bacteria 189381
143 Ga0495583_0000324 3300046506 Bacteria 75413
144 Ga0495606_0000380 3300046507 Bacteria 75389
145 Ga0495606_0002299 3300046507 Bacteria 22573
146 Ga0495606_0008507 3300046507 Bacteria 8900
147 Ga0495606_0031610 3300046507 Bacteria 3677
148 Ga0495610_0000012 3300046512 Bacteria 517442
149 Ga0495610_0015095 3300046512 Bacteria 4505
150 Ga0495610_0020497 3300046512 Bacteria 3669
151 Ga0495616_0002851 3300046513 Bacteria 11269
152 Ga0495616_0016684 3300046513 Bacteria 4059
153 Ga0495632_0004037 3300046519 Bacteria 10131
154 Ga0495637_0000342 3300046520 Bacteria 35805
155 Ga0495644_0001466 3300046523 Bacteria 9623
156 Ga0495644_0002807 3300046523 Bacteria 6903
157 Ga0495648_0000296 3300046524 Bacteria 55214
158 Ga0495648_0001993 3300046524 Bacteria 19363
159 Ga0495648_0106566 3300046524 Bacteria 1534
160 Ga0495654_0000011 3300046530 Bacteria 363172
161 Ga0495597_0009424 3300046542 Bacteria 4823
162 Ga0495633_0003669 3300046558 Bacteria 10142
163 Ga0495633_0003939 3300046558 Bacteria 9663
164 Ga0495633_0045015 3300046558 Bacteria 2090
165 Ga0495668_0000137 3300046616 Bacteria 111150
166 Ga0495668_0003956 3300046616 Bacteria 10806
167 Ga0495668_0005114 3300046616 Bacteria 9018
168 Ga0495668_0022807 3300046616 Bacteria 3576
169 Ga0495611_0004501 3300046648 Bacteria 6017
170 Ga0495611_0018929 3300046648 Bacteria 2955
171 Ga0495625_0002180 3300046660 Bacteria 21737
172 Ga0495625_0009161 3300046660 Bacteria 8321
173 Ga0495659_0000075 3300046664 Bacteria 42595
174 Ga0495659_0000136 3300046664 Bacteria 32380
175 Ga0495661_0030545 3300046665 Bacteria 3430
176 Ga0495661_0064107 3300046665 Bacteria 2170
177 Ga0495669_0062090 3300046684 Bacteria 1692
178 Ga0495670_0000433 3300046691 Bacteria 20075
179 Ga0495670_0005118 3300046691 Bacteria 6447
180 Ga0495671_0000006 3300046692 Bacteria 500471
181 Ga0495671_0000871 3300046692 Bacteria 21659
182 Ga0495671_0010053 3300046692 Bacteria 5262
183 Ga0495671_0014899 3300046692 Bacteria 4178
184 Ga0495649_0009166 3300046694 Bacteria 5902
185 Ga0495660_0000548 3300046810 Bacteria 30850
186 Ga0495660_0059828 3300046810 Bacteria 2048
187 Ga0495636_0003513 3300047318 Bacteria 6077
188 Ga0495672_0004626 3300047320 Bacteria 11170
189 Ga0495683_0003373 3300047323 Bacteria 9327
190 Ga0495683_0010748 3300047323 Bacteria 4828
191 Ga0495687_001185 3300047443 Bacteria 25043
192 Ga0495677_0002276 3300047445 Bacteria 7578
193 Ga0495679_037384 3300047446 Bacteria 1527
194 Ga0495685_000042 3300047447 Bacteria 51387
195 Ga0495673_0000003 3300047469 Bacteria 1491337
196 Ga0495673_0000044 3300047469 Bacteria 283033
197 Ga0495673_0018341 3300047469 Bacteria 3530
198 Ga0495686_0007946 3300047472 Bacteria 7871
199 Ga0495686_0038280 3300047472 Bacteria 3068
200 Ga0496114_0001006 3300048917 Bacteria 21131
201 Ga0496116_0042914 3300048919 Bacteria 3086
202 Ga0496124_0081650 3300048927 Bacteria 2656
203 Ga0496125_0113776 3300048928 Bacteria 1951
204 Ga0496126_0011175 3300048929 Bacteria 9318
205 Ga0495678_004601 3300049459 Bacteria 7924
206 Ga0495682_0003023 3300049460 Bacteria 7646
207 Ga0501235_002002 3300049669 Bacteria 4368
208 Ga0501225_0012904 3300049705 Bacteria 2342
209 Ga0501229_003576 3300049706 Bacteria 1867
210 Ga0501265_001609 3300049762 Bacteria 2542
211 Ga0501267_000218 3300049764 Bacteria 4049
212 nmdc:mga0k408_8681_c1 3300050493 Bacteria 5464
213 nmdc:mga07m45_13801_c1 3300050496 Bacteria 4292
214 nmdc:mga07m45_5630_c1 3300050496 Bacteria 6257
215 nmdc:mga07m45_62692_c1 3300050496 Bacteria 2107
216 Ga0500635_0000114 3300053080 Bacteria 48114
217 Ga0500578_0003965 3300053086 Bacteria 10723
218 Ga0500644_0014461 3300053088 Bacteria 2229
219 Ga0500646_0002700 3300053090 Bacteria 4582
220 Ga0500651_0043728 3300053093 Bacteria 2820
221 Ga0500569_008980 3300053109 Bacteria 2307
222 Ga0500618_000091 3300053125 Bacteria 73830
223 Ga0500652_001129 3300053131 Bacteria 8588
224 Ga0500622_0002587 3300053156 Bacteria 12906
225 Ga0590075_002085 3300059424 Bacteria 4820

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300035114 Ga0373939_0000017 Ga0373939_0000017_6891_8240 390
2 3300035121 Ga0373960_0001199 Ga0373960_0001199_3433_4782 390
3 3300035691 Ga0373931_0000641 Ga0373931_0000641_1336_2685 390
4 3300042129 Ga0450891_000395 Ga0450891_000395_895_2244 393
5 3300042130 Ga0450892_001909 Ga0450892_001909_480_1829 393
6 3300042532 Ga0450893_0007664 Ga0450893_0007664_256_1605 393
7 3300006353 Ga0075370_10014969 Ga0075370_100149693 397
8 3300047472 Ga0495686_0038280 Ga0495686_0038280_65_1402 397
9 3300049669 Ga0501235_002002 Ga0501235_002002_1193_2494 397
10 3300049705 Ga0501225_0012904 Ga0501225_0012904_696_1997 397
11 3300049706 Ga0501229_003576 Ga0501229_003576_345_1646 397
12 3300049764 Ga0501267_000218 Ga0501267_000218_952_2253 397
13 3300050496 nmdc:mga07m45_13801_c1 nmdc:mga07m45_13801_c1_283_1632 397
14 3300003322 rootL2_10095628 rootL2_100956282 398
15 3300003775 Ga0055524_1000292 Ga0055524_100029212 400
16 3300025299 Ga0209256_1000072 Ga0209256_100007291 400
17 3300037471 Ga0395905_0007042 Ga0395905_0007042_7049_8437 400
18 3300003759 Ga0055525_1000038 Ga0055525_1000038196 403
19 3300025230 Ga0209563_100005 Ga0209563_1000051075 403
20 3300039447 Ga0436361_0316723 Ga0436361_0316723_21888_23234 403
21 3300039447 Ga0436361_1161562 Ga0436361_1161562_3286_4638 403
22 3300042135 Ga0450899_004330 Ga0450899_004330_12_1352 403
23 3300031995 Ga0307409_100022485 Ga0307409_1000224853 404
24 3300003323 rootH1_10079341 rootH1_100793412 405
25 3300021361 Ga0213872_10000743 Ga0213872_1000074310 406
26 3300039447 Ga0436361_0148264 Ga0436361_0148264_16962_18344 406
27 3300037471 Ga0395905_0000733 Ga0395905_0000733_523_1872 407
28 3300003323 rootH1_10093337 rootH1_100933372 409
29 3300042876 Ga0451577_0001078 Ga0451577_0001078_19425_20762 410
30 3300046501 Ga0495607_0034966 Ga0495607_0034966_154_1530 410
31 3300046457 Ga0495590_0043444 Ga0495590_0043444_114_1493 411
32 3300046460 Ga0495638_0006913 Ga0495638_0006913_756_2135 411
33 3300046474 Ga0495605_0004192 Ga0495605_0004192_3834_5213 411
34 3300046501 Ga0495607_0011133 Ga0495607_0011133_1060_2439 411
35 3300046506 Ga0495583_0000067 Ga0495583_0000067_101108_102487 411
36 3300046513 Ga0495616_0016684 Ga0495616_0016684_1365_2744 411
37 3300046523 Ga0495644_0001466 Ga0495644_0001466_4312_5691 411
38 3300046523 Ga0495644_0002807 Ga0495644_0002807_1869_3248 411
39 3300046524 Ga0495648_0000296 Ga0495648_0000296_19372_20751 411
40 3300046648 Ga0495611_0004501 Ga0495611_0004501_4525_5904 411
41 3300046648 Ga0495611_0018929 Ga0495611_0018929_1463_2842 411
42 3300046664 Ga0495659_0000075 Ga0495659_0000075_5999_7378 411
43 3300046691 Ga0495670_0005118 Ga0495670_0005118_4008_5387 411
44 3300046692 Ga0495671_0010053 Ga0495671_0010053_1465_2844 411
45 3300047318 Ga0495636_0003513 Ga0495636_0003513_380_1759 411
46 3300047323 Ga0495683_0003373 Ga0495683_0003373_3723_5102 411
47 3300047443 Ga0495687_001185 Ga0495687_001185_8340_9719 411
48 3300047445 Ga0495677_0002276 Ga0495677_0002276_5827_7206 411
49 3300047447 Ga0495685_000042 Ga0495685_000042_34506_35885 411
50 3300047469 Ga0495673_0018341 Ga0495673_0018341_1907_3286 411
51 3300049459 Ga0495678_004601 Ga0495678_004601_2250_3629 411
52 3300049460 Ga0495682_0003023 Ga0495682_0003023_1918_3297 411
53 3300046558 Ga0495633_0003669 Ga0495633_0003669_7370_8749 412
54 3300021361 Ga0213872_10001547 Ga0213872_100015474 413
55 3300021361 Ga0213872_10057174 Ga0213872_100571742 413
56 3300039447 Ga0436361_0568079 Ga0436361_0568079_5555_6931 413
57 3300039447 Ga0436361_0677882 Ga0436361_0677882_73743_75041 413
58 3300046491 Ga0495584_0002538 Ga0495584_0002538_8724_10103 414
59 3300046492 Ga0495585_0065086 Ga0495585_0065086_110_1489 414
60 3300046501 Ga0495607_0032024 Ga0495607_0032024_213_1592 414
61 3300046512 Ga0495610_0015095 Ga0495610_0015095_427_1806 414
62 3300046513 Ga0495616_0002851 Ga0495616_0002851_8469_9848 414
63 3300046665 Ga0495661_0064107 Ga0495661_0064107_541_1920 414
64 3300046691 Ga0495670_0000433 Ga0495670_0000433_7081_8460 414
65 3300003771 Ga0055526_1000001 Ga0055526_1000001348 416
66 3300025295 Ga0209564_1000002 Ga0209564_1000002219 416
67 3300031730 Ga0307516_10001043 Ga0307516_1000104318 416
68 3300031852 Ga0307410_10040706 Ga0307410_100407063 416
69 3300046524 Ga0495648_0106566 Ga0495648_0106566_105_1475 416
70 3300046558 Ga0495633_0003939 Ga0495633_0003939_4870_6246 416
71 3300044656 Ga0466969_0002772 Ga0466969_0002772_3422_4780 417
72 3300002738 JGI25154J39366_1000487 JGI25154J39366_100048713 418
73 3300025246 Ga0209646_1000023 Ga0209646_1000023273 418
74 3300031731 Ga0307405_10047237 Ga0307405_100472373 420
75 3300028794 Ga0307515_10003449 Ga0307515_1000344918 421
76 iso_pu_bacteria 2857564685 2857569920 421
77 iso_pu_bacteria 2919493220 2919495497 423
78 iso_pu_bacteria 2919543075 2919544485 423
79 iso_pu_bacteria 2923525760 2923527755 423
80 3300025960 Ga0207651_10004808 Ga0207651_100048083 425
81 3300046452 Ga0495617_000013 Ga0495617_000013_247959_249305 425
82 3300046463 Ga0495653_0000005 Ga0495653_0000005_86231_87577 425
83 3300046471 Ga0495650_0000698 Ga0495650_0000698_23923_25269 425
84 3300046471 Ga0495650_0002998 Ga0495650_0002998_11196_12542 425
85 3300046492 Ga0495585_0001032 Ga0495585_0001032_19824_21170 425
86 3300046507 Ga0495606_0000380 Ga0495606_0000380_19614_20960 425
87 3300046512 Ga0495610_0000012 Ga0495610_0000012_174469_175815 425
88 3300046512 Ga0495610_0020497 Ga0495610_0020497_597_1943 425
89 3300046524 Ga0495648_0001993 Ga0495648_0001993_9553_10899 425
90 3300046558 Ga0495633_0045015 Ga0495633_0045015_513_1859 425
91 3300046616 Ga0495668_0000137 Ga0495668_0000137_64845_66191 425
92 3300046616 Ga0495668_0003956 Ga0495668_0003956_1903_3249 425
93 3300046665 Ga0495661_0030545 Ga0495661_0030545_2038_3384 425
94 3300046692 Ga0495671_0000006 Ga0495671_0000006_73747_75093 425
95 3300046692 Ga0495671_0014899 Ga0495671_0014899_276_1622 425
96 3300047323 Ga0495683_0010748 Ga0495683_0010748_3129_4475 425
97 3300047446 Ga0495679_037384 Ga0495679_037384_93_1439 425
98 3300047469 Ga0495673_0000044 Ga0495673_0000044_40687_42033 425
99 3300053125 Ga0500618_000091 Ga0500618_000091_26444_27790 425
100 iso_pu_bacteria 2643221544 2643745770 425
101 iso_pu_bacteria 2643221585 2643936842 425
102 iso_pu_bacteria 2643221639 2644221673 425
103 iso_pu_bacteria 2643221646 2644257562 425
104 iso_pu_bacteria 2643221656 2644318743 425
105 iso_pu_bacteria 2738541337 2739058547 425
106 3300005366 Ga0070659_100043752 Ga0070659_1000437522 427
107 3300021361 Ga0213872_10000018 Ga0213872_10000018157 427
108 3300031250 Ga0265331_10027495 Ga0265331_100274953 427
109 3300031251 Ga0265327_10000083 Ga0265327_10000083147 427
110 3300005459 Ga0068867_100000420 Ga0068867_10000042017 428
111 3300009148 Ga0105243_10005037 Ga0105243_100050373 428
112 3300014745 Ga0157377_10000152 Ga0157377_1000015223 428
113 3300025935 Ga0207709_10002662 Ga0207709_100026623 428
114 3300026089 Ga0207648_10001146 Ga0207648_1000114622 428
115 3300042439 Ga0439464_0016572 Ga0439464_0016572_390_1766 428
116 3300046506 Ga0495583_0000324 Ga0495583_0000324_7851_9287 428
117 3300046507 Ga0495606_0002299 Ga0495606_0002299_16899_18335 428
118 3300046616 Ga0495668_0022807 Ga0495668_0022807_1178_2614 428
119 3300046660 Ga0495625_0009161 Ga0495625_0009161_2458_3894 428
120 3300046684 Ga0495669_0062090 Ga0495669_0062090_242_1678 428
121 3300046694 Ga0495649_0009166 Ga0495649_0009166_68_1504 428
122 3300026067 Ga0207678_10033627 Ga0207678_100336273 430
123 3300053080 Ga0500635_0000114 Ga0500635_0000114_36416_37855 430
124 3300046810 Ga0495660_0000548 Ga0495660_0000548_19250_20623 431
125 3300047472 Ga0495686_0007946 Ga0495686_0007946_305_1678 431
126 3300003775 Ga0055524_1000003 Ga0055524_1000003225 432
127 3300006948 Ga0099826_10000002 Ga0099826_10000002667 432
128 3300021361 Ga0213872_10000001 Ga0213872_1000000168 432
129 3300025299 Ga0209256_1000007 Ga0209256_1000007141 432
130 3300027666 Ga0209282_1000001 Ga0209282_1000001487 432
131 3300039447 Ga0436361_0529332 Ga0436361_0529332_80969_82477 432
132 iso_pu_bacteria 2643221645 2644251243 432
133 iso_pu_bacteria 2643221664 2644357547 432
134 iso_pu_bacteria 2738541280 2738740132 432
135 iso_pu_bacteria 2738541300 2738844103 432
136 iso_pu_bacteria 2738543018 2739274334 432
137 iso_pu_bacteria 2738543030 2739343378 432
138 3300049762 Ga0501265_001609 Ga0501265_001609_1063_2457 433
139 iso_pu_bacteria 2738541297 2738828317 433
140 iso_pu_bacteria 2738541357 2739152113 433
141 iso_pu_bacteria 2738543003 2739193866 433
142 iso_pu_bacteria 2738543026 2739320509 433
143 iso_pu_bacteria 2738543029 2739338583 433
144 iso_pu_bacteria 2904424332 2904424969 433
145 3300031649 Ga0307514_10000390 Ga0307514_1000039054 434
146 3300042121 Ga0450919_000344 Ga0450919_000344_1483_2856 434
147 3300042531 Ga0450918_006129 Ga0450918_006129_80_1453 434
148 iso_pu_bacteria 2643221644 2644247133 434
149 3300003322 rootL2_10007932 rootL2_1000793213 436
150 3300028577 Ga0265318_10000047 Ga0265318_1000004790 436
151 3300031240 Ga0265320_10012201 Ga0265320_100122014 436
152 3300031595 Ga0265313_10013999 Ga0265313_100139994 436
153 3300031711 Ga0265314_10000872 Ga0265314_100008728 436
154 3300045051 Ga0451576_0005339 Ga0451576_0005339_8859_10244 436
155 3300046507 Ga0495606_0008507 Ga0495606_0008507_5720_7093 436
156 3300046507 Ga0495606_0031610 Ga0495606_0031610_1786_3159 436
157 3300046542 Ga0495597_0009424 Ga0495597_0009424_389_1762 436
158 3300046664 Ga0495659_0000136 Ga0495659_0000136_14552_15925 436
159 3300046692 Ga0495671_0000871 Ga0495671_0000871_3618_4991 436
160 3300046810 Ga0495660_0059828 Ga0495660_0059828_553_1926 436
161 3300047320 Ga0495672_0004626 Ga0495672_0004626_3020_4393 436
162 3300050493 nmdc:mga0k408_8681_c1 nmdc:mga0k408_8681_c1_2360_3748 436
163 iso_pu_bacteria 2585428057 2587727308 436
164 iso_pu_bacteria 2585428058 2587735942 436
165 iso_pu_bacteria 2643221592 2643967243 436
166 iso_pu_bacteria 2643221625 2644140074 436
167 iso_pu_bacteria 2643221648 2644271314 436
168 3300003763 Ga0055529_1000076 Ga0055529_100007695 437
169 3300009036 Ga0105244_10011911 Ga0105244_100119112 437
170 3300025245 Ga0207425_1000492 Ga0207425_10004928 437
171 3300025272 Ga0209455_1000073 Ga0209455_100007396 437
172 3300025294 Ga0209025_1013574 Ga0209025_10135742 437
173 3300025297 Ga0209758_1006078 Ga0209758_10060782 437
174 3300025728 Ga0207655_1031236 Ga0207655_10312362 437
175 3300031239 Ga0265328_10004325 Ga0265328_100043253 437
176 3300046471 Ga0495650_0000170 Ga0495650_0000170_100559_101941 437
177 3300046471 Ga0495650_0003590 Ga0495650_0003590_8489_9871 437
178 3300046501 Ga0495607_0116227 Ga0495607_0116227_10_1392 437
179 3300046520 Ga0495637_0000342 Ga0495637_0000342_1635_3017 437
180 3300046530 Ga0495654_0000011 Ga0495654_0000011_213171_214553 437
181 3300046616 Ga0495668_0005114 Ga0495668_0005114_7002_8384 437
182 3300046660 Ga0495625_0002180 Ga0495625_0002180_1916_3298 437
183 3300047469 Ga0495673_0000003 Ga0495673_0000003_260843_262225 437
184 3300048919 Ga0496116_0042914 Ga0496116_0042914_477_1859 437
185 3300048927 Ga0496124_0081650 Ga0496124_0081650_798_2180 437
186 3300048928 Ga0496125_0113776 Ga0496125_0113776_456_1838 437
187 3300048929 Ga0496126_0011175 Ga0496126_0011175_4868_6250 437
188 iso_pu_bacteria 2643221644 2644245375 437
189 3300009545 Ga0105237_10000441 Ga0105237_1000044133 438
190 3300010375 Ga0105239_10000417 Ga0105239_1000041726 438
191 3300031456 Ga0307513_10090620 Ga0307513_100906203 438
192 3300044765 Ga0466970_0007085 Ga0466970_0007085_648_2051 438
193 3300045051 Ga0451576_0000087 Ga0451576_0000087_25089_26486 438
194 3300045051 Ga0451576_0007811 Ga0451576_0007811_1262_2659 438
195 3300046474 Ga0495605_0000107 Ga0495605_0000107_53181_54566 438
196 3300005457 Ga0070662_100006212 Ga0070662_1000062124 439
197 3300025933 Ga0207706_10001057 Ga0207706_100010575 439
198 3300003215 JGI25153J46596_10000904 JGI25153J46596_100009045 440
199 3300003323 rootH1_10114379 rootH1_101143795 440
200 3300005262 Ga0065165_1001510 Ga0065165_100151015 440
201 3300006353 Ga0075370_10013526 Ga0075370_100135262 440
202 3300025297 Ga0209758_1000248 Ga0209758_100024862 440
203 3300026142 Ga0207698_10012292 Ga0207698_100122924 440
204 3300041452 Ga0451793_0176012 Ga0451793_0176012_791_2185 440
205 3300046519 Ga0495632_0004037 Ga0495632_0004037_2729_4123 440
206 3300050496 nmdc:mga07m45_5630_c1 nmdc:mga07m45_5630_c1_4163_5557 440
207 3300050496 nmdc:mga07m45_62692_c1 nmdc:mga07m45_62692_c1_388_1788 440
208 3300053088 Ga0500644_0014461 Ga0500644_0014461_397_1791 440
209 3300053090 Ga0500646_0002700 Ga0500646_0002700_2021_3415 440
210 3300053093 Ga0500651_0043728 Ga0500651_0043728_747_2141 440
211 3300053109 Ga0500569_008980 Ga0500569_008980_829_2223 440
212 3300053131 Ga0500652_001129 Ga0500652_001129_3007_4401 440
213 3300053156 Ga0500622_0002587 Ga0500622_0002587_10522_11916 440
214 iso_pu_bacteria 2588253510 2588292662 440
215 3300002773 JGI25152J39213_1001024 JGI25152J39213_10010244 441
216 3300003215 JGI25153J46596_10009817 JGI25153J46596_100098173 441
217 3300003771 Ga0055526_1001136 Ga0055526_10011365 441
218 3300003791 Ga0055530_10002278 Ga0055530_100022787 441
219 3300003791 Ga0055530_10007662 Ga0055530_100076623 441
220 3300003792 Ga0055540_1000004 Ga0055540_1000004227 441
221 3300006946 Ga0079104_1000013 Ga0079104_1000013247 441
222 3300025245 Ga0207425_1001976 Ga0207425_10019764 441
223 3300025258 Ga0209129_1000035 Ga0209129_1000035213 441
224 3300025295 Ga0209564_1000024 Ga0209564_1000024407 441
225 3300025297 Ga0209758_1000066 Ga0209758_1000066105 441
226 3300025298 Ga0209050_1000614 Ga0209050_100061436 441
227 3300025298 Ga0209050_1001157 Ga0209050_100115721 441
228 3300025298 Ga0209050_1005089 Ga0209050_10050897 441
229 3300025299 Ga0209256_1000071 Ga0209256_100007155 441
230 3300025303 Ga0209051_1000016 Ga0209051_1000016320 441
231 3300025304 Ga0209257_1000115 Ga0209257_100011529 441
232 3300027111 Ga0209281_1000182 Ga0209281_1000182113 441
233 3300042531 Ga0450918_000224 Ga0450918_000224_3450_4841 441
234 3300048917 Ga0496114_0001006 Ga0496114_0001006_1887_3275 441
235 3300005330 Ga0070690_100001021 Ga0070690_10000102110 442
236 3300005719 Ga0068861_100083725 Ga0068861_1000837251 442
237 3300026118 Ga0207675_100073408 Ga0207675_1000734082 442
238 3300003322 rootL2_10137647 rootL2_101376476 443
239 3300009176 Ga0105242_10034740 Ga0105242_100347403 443
240 3300028786 Ga0307517_10088245 Ga0307517_100882452 444
241 3300031730 Ga0307516_10002562 Ga0307516_100025624 444
242 3300053086 Ga0500578_0003965 Ga0500578_0003965_4105_5610 444
243 3300059424 Ga0590075_002085 Ga0590075_002085_686_2233 444
244 3300006946 Ga0079104_1000056 Ga0079104_1000056104 445
245 3300044658 Ga0466972_0002070 Ga0466972_0002070_5753_7168 445
246 3300003316 rootH1_10013038 rootH1_100130382 450
247 3300003316 rootH1_10013039 rootH1_100130391 451
248 3300037466 Ga0395898_0076697 Ga0395898_0076697_303_1715 451
249 3300038443 Ga0395901_0003981 Ga0395901_0003981_3995_5407 451
250 3300025242 Ga0209258_100171 Ga0209258_10017134 452
251 3300025254 Ga0209148_1002666 Ga0209148_10026665 452
252 3300025256 Ga0209759_1000646 Ga0209759_100064626 452
253 3300025272 Ga0209455_1000148 Ga0209455_100014820 452
254 3300002705 JGI25156J39149_1000042 JGI25156J39149_100004270 453

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01554

MatE

MatE

300

461

0.97

PF01554

MatE

MatE

75

234

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fv6-assembly1.cif.gz_A monomer structure of the mate family multidrug resistance transporter aq_128 from aquifex aeolicus in the outward-facing state 0.9028 20 403
6fv7-assembly1.cif.gz_B dimer structure of the mate family multidrug resistance transporter aq_128 from aquifex aeolicus in the outward-facing state 0.8814 20 439
6hfb-assembly3.cif.gz_C outward-facing conformation of a multidrug resistance mate family transporter of the mop superfamily. 0.8542 20 438
6ids-assembly1.cif.gz_A crystal structure of vibrio cholerae mate transporter vcmn d35n mutant 0.8513 20 440
6z70-assembly1.cif.gz_A structure of the mate family multidrug resistance transporter aq_128 from aquifex aeolicus in the outward-facing state 0.8466 20 440
ID Description Score Start End Superfamily
af_P76352_330_491_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9514 252 409 1.20.1250.20
af_U3Q0C3_281_442_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9499 254 405 1.20.1250.20
af_Q2G140_24_185_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.946 30 183 1.20.1250.20
af_P71616_19_179_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9447 29 183 1.20.1250.20
af_Q9UT92_325_480_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9423 255 403 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A366XTW8-F1-model_v4 MATE family efflux transporter 0.9484 19 359 GO:0015297
GO:0016020
GO:0042910
AF-A0A3D4FGP5-F1-model_v4 Probable multidrug resistance protein NorM 0.9463 20 370 GO:0005886
GO:0015297
GO:0042910
AF-A0A3B9G067-F1-model_v4 Multidrug export protein MepA 0.9449 20 398 GO:0005886
GO:0015297
GO:0042910
GO:0046677
AF-A0A7J3SKR0-F1-model_v4 Multidrug-efflux transporter 0.942 20 391 GO:0005886
GO:0006811
GO:0015297
GO:0042910
AF-A0A316DCI4-F1-model_v4 Probable multidrug resistance protein NorM 0.9417 20 317 GO:0005886
GO:0015297
GO:0042910

Feature Viewer

pLDDT pTM Quality
81.92 0.83 High
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Predicted Structure (AlphaFold2)

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