F364745

General Info

Members Datasets Scaffolds Average Seq Length
254 175 508 402

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100040159|Ga0068860_1000401592
Length 467
Sequence VRAAGRARSVRSALADFPLAPIMVLQDQCGPATRSAEVTIGPEAHRPDCLGGVIYDMSNSSAGKALAGLRVLDLSRVLAGPLGGQILGDLGASVVKVERRGSGDPSRTMGAIITRSAAGAPTQSTFHQACNRNKLSLTVDFASAKGQELIRKLAREADILIENYLPGTLKQYGLDYEALSAINPRLIYCSVTGYGQEGPRRSQPGFDPVFQAETGIMAVTGEADGRPLKTGIYAVDELGGYNAAIGILAAVVERERSGRGQQVDISLFDCGLAALTTVGQTYLHTGVEPARNGNAGVAGGPSDTFACQDGLILLMGGLGNQFTSICRILGIADVAEDPRFLTSGLRFTNRRELFDLLQAQIGKWKREDLLAELAKASVPSGLVNTVGQAFADKHSVARGLVVETEQAGIGTVRSIANPVRLSRTPITYDLAAPALGEGQEEVLQGWLGLGRDEIDALAAEGAIGREG

Samples

Sample ID Description Type Environment
1 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
64 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
65 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
102 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
103 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
104 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
109 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
110 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
111 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
112 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
113 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
116 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
117 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
118 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
119 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
120 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
121 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
122 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
123 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
124 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
125 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
126 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
127 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
128 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
129 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
130 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
131 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
132 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
133 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
134 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
135 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
136 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
137 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
138 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
139 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
140 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
141 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
142 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
143 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
144 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
145 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
146 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
147 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
148 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
149 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
150 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
151 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
156 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
157 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
158 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
159 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
165 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
166 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
167 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
168 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
169 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
170 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
171 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
172 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
173 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
174 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
175 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.24
Metatranscriptomes 0
Isolates 2.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.33
Nodule 0.39
Rhizoplane 2.76
Rhizosphere 83.07
Stem 0
Stem Tuber 0
Unclassified 8.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068860_100040159 3300005843 Unclassified 4474
2 JGI24751J29686_10002790 3300002459 Bacteria 3514
3 JGI25153J46596_10000006 3300003215 Bacteria 447760
4 rootL2_10016486 3300003322 Bacteria 7668
5 rootH1_10001270 3300003323 Bacteria 4286
6 Ga0055525_1000123 3300003759 Bacteria 118289
7 Ga0070658_10027306 3300005327 Unclassified 4581
8 Ga0070676_10027449 3300005328 Unclassified 3229
9 Ga0070683_100005877 3300005329 Bacteria 10267
10 Ga0070670_100018000 3300005331 Bacteria 6063
11 Ga0070670_100034185 3300005331 Plasmid 4375
12 Ga0068868_100005230 3300005338 Bacteria 9107
13 Ga0070660_100069687 3300005339 Unclassified 2743
14 Ga0070661_100006762 3300005344 Bacteria 7902
15 Ga0070668_100000362 3300005347 Bacteria 30045
16 Ga0070668_100000378 3300005347 Bacteria 29470
17 Ga0070669_100006242 3300005353 Bacteria 8604
18 Ga0070669_100007016 3300005353 Bacteria 8098
19 Ga0070669_100008424 3300005353 Bacteria 7358
20 Ga0070675_100002947 3300005354 Bacteria 12842
21 Ga0070671_100000546 3300005355 Bacteria 26609
22 Ga0070671_100027726 3300005355 Bacteria 4664
23 Ga0070674_100024309 3300005356 Bacteria 3931
24 Ga0070673_100002729 3300005364 Bacteria 10835
25 Ga0070667_100000055 3300005367 Bacteria 151072
26 Ga0070667_100000145 3300005367 Bacteria 89528
27 Ga0070667_100031666 3300005367 Unclassified 4409
28 Ga0070667_100035723 3300005367 Bacteria 4164
29 Ga0070713_100008610 3300005436 Bacteria 7246
30 Ga0070708_100066871 3300005445 Unclassified 3226
31 Ga0070678_100003040 3300005456 Bacteria 9295
32 Ga0070678_100003635 3300005456 Bacteria 8603
33 Ga0070678_100017855 3300005456 Bacteria 4581
34 Ga0070678_100048514 3300005456 Bacteria 3058
35 Ga0070681_10022390 3300005458 Bacteria 6345
36 Ga0068867_100058866 3300005459 Bacteria 2847
37 Ga0070706_100069245 3300005467 Bacteria 3264
38 Ga0070679_100013798 3300005530 Bacteria 7741
39 Ga0070679_100234770 3300005530 Bacteria 1793
40 Ga0070684_100080188 3300005535 Unclassified 2887
41 Ga0070672_100073002 3300005543 Bacteria 2734
42 Ga0070672_100128348 3300005543 Unclassified 2082
43 Ga0070665_100000049 3300005548 Bacteria 261123
44 Ga0070665_100026630 3300005548 Bacteria 5822
45 Ga0070665_100027397 3300005548 Bacteria 5740
46 Ga0068855_100127651 3300005563 Bacteria 2907
47 Ga0068854_100001636 3300005578 Bacteria 13636
48 Ga0068856_100112867 3300005614 Bacteria 2716
49 Ga0068852_100006747 3300005616 Bacteria 8327
50 Ga0068859_100019104 3300005617 Bacteria 6883
51 Ga0068859_100350119 3300005617 Bacteria 1572
52 Ga0068864_100005583 3300005618 Bacteria 10315
53 Ga0068861_100012813 3300005719 Bacteria 5855
54 Ga0068851_10012326 3300005834 Bacteria 4027
55 Ga0068863_100000723 3300005841 Bacteria 33109
56 Ga0068863_100000751 3300005841 Bacteria 32434
57 Ga0068863_100004261 3300005841 Bacteria 14110
58 Ga0068858_100000208 3300005842 Bacteria 63552
59 Ga0068860_100000090 3300005843 Bacteria 151520
60 Ga0068860_100000546 3300005843 Bacteria 45813
61 Ga0068860_100000942 3300005843 Bacteria 32259
62 Ga0068862_100019096 3300005844 Bacteria 5715
63 Ga0075365_10201295 3300006038 Bacteria 1395
64 Ga0075369_10025450 3300006186 Bacteria 2461
65 Ga0097621_100001383 3300006237 Bacteria 16687
66 Ga0068871_100001866 3300006358 Bacteria 14250
67 Ga0097620_100019102 3300006931 Bacteria 6883
68 Ga0097620_100350105 3300006931 Bacteria 1572
69 Ga0105240_10012959 3300009093 Bacteria 11486
70 Ga0105240_10121500 3300009093 Bacteria 3144
71 Ga0105240_10142324 3300009093 Bacteria 2866
72 Ga0105240_10247569 3300009093 Bacteria 2063
73 Ga0105247_10086987 3300009101 Unclassified 1978
74 Ga0105247_10174575 3300009101 Bacteria 1431
75 Ga0105243_10000356 3300009148 Bacteria 48896
76 Ga0105248_10152510 3300009177 Bacteria 2607
77 Ga0105237_10012727 3300009545 Bacteria 8851
78 Ga0105237_10077300 3300009545 Bacteria 3319
79 Ga0105249_10024860 3300009553 Bacteria 5387
80 Ga0105249_10123647 3300009553 Bacteria 2462
81 Ga0105148_100160 3300009978 Bacteria 9959
82 Ga0105239_10014556 3300010375 Bacteria 8728
83 Ga0105239_10323188 3300010375 Bacteria 1740
84 Ga0105246_10149700 3300011119 Bacteria 1765
85 Ga0157374_10022817 3300013296 Bacteria 5589
86 Ga0157374_10075998 3300013296 Bacteria 3175
87 Ga0157374_10291200 3300013296 Bacteria 1614
88 Ga0157378_10216082 3300013297 Bacteria 1820
89 Ga0163162_10010859 3300013306 Bacteria 8864
90 Ga0157375_10019435 3300013308 Bacteria 6178
91 Ga0157375_10455026 3300013308 Unclassified 1445
92 Ga0182008_10002931 3300014497 Bacteria 10524
93 Ga0157379_10000433 3300014968 Bacteria 33887
94 Ga0157379_10019330 3300014968 Bacteria 6017
95 Ga0157379_10024775 3300014968 Bacteria 5326
96 Ga0157376_10068932 3300014969 Unclassified 2997
97 Ga0157376_10081361 3300014969 Bacteria 2781
98 Ga0182005_1026200 3300015265 Bacteria 1591
99 Ga0213876_10010730 3300021384 Bacteria 4909
100 Ga0209563_100024 3300025230 Bacteria 601155
101 Ga0209677_103262 3300025253 Bacteria 5397
102 Ga0209758_1000001 3300025297 Bacteria 1981790
103 Ga0207682_10031771 3300025893 Bacteria 2120
104 Ga0207680_10056892 3300025903 Unclassified 2364
105 Ga0207647_10056379 3300025904 Bacteria 2411
106 Ga0207645_10039450 3300025907 Bacteria 3026
107 Ga0207707_10016969 3300025912 Bacteria 6343
108 Ga0207695_10095021 3300025913 Bacteria 2986
109 Ga0207695_10102574 3300025913 Bacteria 2853
110 Ga0207671_10004493 3300025914 Bacteria 13281
111 Ga0207671_10011368 3300025914 Bacteria 7251
112 Ga0207649_10047863 3300025920 Unclassified 2634
113 Ga0207681_10002357 3300025923 Bacteria 12008
114 Ga0207681_10007939 3300025923 Bacteria 6488
115 Ga0207681_10099718 3300025923 Bacteria 2092
116 Ga0207650_10002400 3300025925 Bacteria 13048
117 Ga0207650_10015623 3300025925 Bacteria 5292
118 Ga0207659_10029979 3300025926 Unclassified 3712
119 Ga0207664_10005557 3300025929 Bacteria 8631
120 Ga0207644_10000237 3300025931 Bacteria 37870
121 Ga0207644_10003257 3300025931 Bacteria 10481
122 Ga0207709_10000139 3300025935 Bacteria 102200
123 Ga0207669_10000326 3300025937 Bacteria 21811
124 Ga0207669_10002220 3300025937 Bacteria 8253
125 Ga0207691_10003106 3300025940 Bacteria 16212
126 Ga0207661_10017292 3300025944 Bacteria 5332
127 Ga0207679_10008065 3300025945 Bacteria 6697
128 Ga0207651_10008721 3300025960 Bacteria 5497
129 Ga0207651_10025469 3300025960 Bacteria 3677
130 Ga0207712_10105880 3300025961 Unclassified 2100
131 Ga0207668_10000048 3300025972 Bacteria 100390
132 Ga0207668_10000115 3300025972 Bacteria 57015
133 Ga0207640_10009799 3300025981 Bacteria 5373
134 Ga0207658_10000021 3300025986 Bacteria 201456
135 Ga0207658_10000090 3300025986 Bacteria 100143
136 Ga0207658_10000240 3300025986 Bacteria 57551
137 Ga0207658_10035710 3300025986 Bacteria 3561
138 Ga0207677_10001607 3300026023 Bacteria 11991
139 Ga0207677_10252110 3300026023 Bacteria 1434
140 Ga0207703_10000765 3300026035 Bacteria 31688
141 Ga0207678_10114525 3300026067 Bacteria 2300
142 Ga0207641_10000040 3300026088 Bacteria 192446
143 Ga0207641_10000344 3300026088 Bacteria 55824
144 Ga0207641_10000565 3300026088 Bacteria 41360
145 Ga0207641_10020788 3300026088 Bacteria 5394
146 Ga0207641_10032350 3300026088 Bacteria 4342
147 Ga0207676_10017818 3300026095 Bacteria 5153
148 Ga0207675_100077741 3300026118 Unclassified 3109
149 Ga0207683_10001211 3300026121 Bacteria 23388
150 Ga0207683_10001648 3300026121 Bacteria 19996
151 Ga0207683_10003133 3300026121 Bacteria 14448
152 Ga0207683_10287419 3300026121 Bacteria 1503
153 Ga0207698_10002547 3300026142 Bacteria 10816
154 Ga0268266_10000036 3300028379 Bacteria 348910
155 Ga0268266_10037605 3300028379 Bacteria 4122
156 Ga0268266_10040420 3300028379 Bacteria 3975
157 Ga0268266_10079507 3300028379 Bacteria 2855
158 Ga0268264_10000075 3300028381 Bacteria 256011
159 Ga0268264_10000351 3300028381 Bacteria 69834
160 Ga0268264_10000592 3300028381 Bacteria 44004
161 Ga0268264_10003821 3300028381 Bacteria 12915
162 Ga0268264_10017842 3300028381 Bacteria 5810
163 Ga0307517_10010622 3300028786 Bacteria 12866
164 Ga0307515_10169991 3300028794 Bacteria 2178
165 Ga0265327_10000194 3300031251 Bacteria 129264
166 Ga0307513_10021538 3300031456 Bacteria 7607
167 Ga0307513_10240219 3300031456 Bacteria 1617
168 Ga0265314_10127735 3300031711 Bacteria 1590
169 Ga0307510_10041741 3300033180 Bacteria 5010
170 Ga0373925_0049256 3300037068 Unclassified 3140
171 Ga0395900_0552856 3300037418 Bacteria 1095
172 Ga0395898_0061670 3300037466 Bacteria 3643
173 Ga0395905_0087805 3300037471 Bacteria 2915
174 Ga0436364_0559939 3300037853 Bacteria 3310
175 Ga0400483_013583 3300039062 Bacteria 5732
176 Ga0400483_084164 3300039062 Bacteria 2028
177 Ga0400483_087768 3300039062 Bacteria 2621
178 Ga0400483_150155 3300039062 Bacteria 7824
179 Ga0400483_257781 3300039062 Bacteria 5521
180 Ga0400489_73338 3300039093 Unclassified 1632
181 Ga0436365_0431817 3300039437 Bacteria 13292
182 Ga0436365_1312663 3300039437 Bacteria 4543
183 Ga0436363_0370414 3300039450 Bacteria 11567
184 Ga0451577_0401092 3300042876 Bacteria 1245
185 Ga0453684_0009224 3300044712 Bacteria 17331
186 Ga0466957_0054546 3300044842 Bacteria 2440
187 Ga0466958_0017864 3300045836 Bacteria 4108
188 Ga0495617_013531 3300046452 Bacteria 2778
189 Ga0495627_037410 3300046453 Bacteria 1505
190 Ga0495629_0049598 3300046459 Bacteria 2942
191 Ga0495650_0000083 3300046471 Bacteria 237725
192 Ga0495580_0007615 3300046472 Bacteria 8689
193 Ga0495582_0001345 3300046473 Bacteria 13807
194 Ga0495584_0024985 3300046491 Bacteria 3029
195 Ga0495585_0009369 3300046492 Bacteria 5876
196 Ga0495596_0017204 3300046500 Bacteria 2997
197 Ga0495583_0000891 3300046506 Bacteria 35790
198 Ga0495583_0003977 3300046506 Bacteria 10911
199 Ga0495583_0014941 3300046506 Bacteria 4249
200 Ga0495606_0000215 3300046507 Bacteria 102974
201 Ga0495643_0000262 3300046522 Bacteria 76727
202 Ga0495643_0001897 3300046522 Bacteria 17658
203 Ga0495643_0033929 3300046522 Bacteria 2819
204 Ga0495648_0000167 3300046524 Bacteria 76325
205 Ga0495648_0030445 3300046524 Bacteria 3568
206 Ga0495648_0041299 3300046524 Bacteria 2915
207 Ga0495663_0004580 3300046525 Bacteria 3877
208 Ga0495663_0018983 3300046525 Bacteria 1962
209 Ga0495587_0019423 3300046536 Bacteria 4206
210 Ga0495597_0063963 3300046542 Bacteria 1598
211 Ga0495622_0007010 3300046557 Bacteria 5232
212 Ga0495633_0000185 3300046558 Bacteria 81373
213 Ga0495633_0009723 3300046558 Bacteria 5287
214 Ga0495668_0000033 3300046616 Bacteria 254277
215 Ga0495668_0015113 3300046616 Bacteria 4514
216 Ga0495625_0004906 3300046660 Bacteria 12458
217 Ga0495625_0007812 3300046660 Bacteria 9223
218 Ga0495661_0013290 3300046665 Bacteria 5536
219 Ga0495669_0000660 3300046684 Bacteria 14981
220 Ga0495649_0064586 3300046694 Bacteria 1965
221 Ga0495600_0001829 3300046809 Bacteria 11922
222 Ga0495674_0228535 3300047319 Bacteria 1536
223 Ga0495683_0008209 3300047323 Bacteria 5599
224 Ga0495687_000041 3300047443 Bacteria 229171
225 Ga0495677_0040005 3300047445 Bacteria 1714
226 Ga0495681_0015610 3300047470 Bacteria 4290
227 Ga0496101_0061272 3300048904 Unclassified 2732
228 Ga0496105_0211239 3300048908 Bacteria 1582
229 Ga0496107_0124178 3300048910 Bacteria 1903
230 Ga0496108_0018095 3300048911 Bacteria 5765
231 Ga0496109_0041223 3300048912 Bacteria 4183
232 Ga0496109_0088160 3300048912 Unclassified 2867
233 Ga0496110_0044179 3300048913 Unclassified 3891
234 Ga0496117_0010235 3300048920 Bacteria 8593
235 Ga0496118_0020704 3300048921 Bacteria 5824
236 Ga0496122_0003036 3300048925 Bacteria 22719
237 Ga0496123_0000026 3300048926 Bacteria 318040
238 Ga0496125_0005560 3300048928 Bacteria 13937
239 Ga0501034_0010921 3300049571 Bacteria 9435
240 Ga0501070_0164809 3300049586 Bacteria 1827
241 Ga0501044_0026440 3300049823 Bacteria 6141
242 nmdc:mga08y16_89969_c1 3300050511 Bacteria 3199
243 nmdc:mga0n895_139250_c1 3300050512 Bacteria 2454
244 Ga0500610_0000183 3300053079 Bacteria 18790
245 Ga0500643_001692 3300053087 Bacteria 12255
246 Ga0500595_000298 3300053119 Bacteria 32638
247 Ga0500636_0000795 3300053177 Bacteria 16998
248 2715500117 2713897090 Bacteria 3353799
249 2830079160 2830075706 Bacteria 3855215
250 2894657192 2894652903 Bacteria 4587256
251 2939633140 2939631187 Bacteria 6118131
252 2995396866 2995392953 Bacteria 4539380
253 3001897280 3001892409 Bacteria 6328293
254 8057105841 8057101203 Bacteria 5034064
255 Ga0068860_100040159
256 JGI24751J29686_10002790
257 JGI25153J46596_10000006
258 rootL2_10016486
259 rootH1_10001270
260 Ga0055525_1000123
261 Ga0070658_10027306
262 Ga0070676_10027449
263 Ga0070683_100005877
264 Ga0070670_100018000
265 Ga0070670_100034185
266 Ga0068868_100005230
267 Ga0070660_100069687
268 Ga0070661_100006762
269 Ga0070668_100000362
270 Ga0070668_100000378
271 Ga0070669_100006242
272 Ga0070669_100007016
273 Ga0070669_100008424
274 Ga0070675_100002947
275 Ga0070671_100000546
276 Ga0070671_100027726
277 Ga0070674_100024309
278 Ga0070673_100002729
279 Ga0070667_100000055
280 Ga0070667_100000145
281 Ga0070667_100031666
282 Ga0070667_100035723
283 Ga0070713_100008610
284 Ga0070708_100066871
285 Ga0070678_100003040
286 Ga0070678_100003635
287 Ga0070678_100017855
288 Ga0070678_100048514
289 Ga0070681_10022390
290 Ga0068867_100058866
291 Ga0070706_100069245
292 Ga0070679_100013798
293 Ga0070679_100234770
294 Ga0070684_100080188
295 Ga0070672_100073002
296 Ga0070672_100128348
297 Ga0070665_100000049
298 Ga0070665_100026630
299 Ga0070665_100027397
300 Ga0068855_100127651
301 Ga0068854_100001636
302 Ga0068856_100112867
303 Ga0068852_100006747
304 Ga0068859_100019104
305 Ga0068859_100350119
306 Ga0068864_100005583
307 Ga0068861_100012813
308 Ga0068851_10012326
309 Ga0068863_100000723
310 Ga0068863_100000751
311 Ga0068863_100004261
312 Ga0068858_100000208
313 Ga0068860_100000090
314 Ga0068860_100000546
315 Ga0068860_100000942
316 Ga0068862_100019096
317 Ga0075365_10201295
318 Ga0075369_10025450
319 Ga0097621_100001383
320 Ga0068871_100001866
321 Ga0097620_100019102
322 Ga0097620_100350105
323 Ga0105240_10012959
324 Ga0105240_10121500
325 Ga0105240_10142324
326 Ga0105240_10247569
327 Ga0105247_10086987
328 Ga0105247_10174575
329 Ga0105243_10000356
330 Ga0105248_10152510
331 Ga0105237_10012727
332 Ga0105237_10077300
333 Ga0105249_10024860
334 Ga0105249_10123647
335 Ga0105148_100160
336 Ga0105239_10014556
337 Ga0105239_10323188
338 Ga0105246_10149700
339 Ga0157374_10022817
340 Ga0157374_10075998
341 Ga0157374_10291200
342 Ga0157378_10216082
343 Ga0163162_10010859
344 Ga0157375_10019435
345 Ga0157375_10455026
346 Ga0182008_10002931
347 Ga0157379_10000433
348 Ga0157379_10019330
349 Ga0157379_10024775
350 Ga0157376_10068932
351 Ga0157376_10081361
352 Ga0182005_1026200
353 Ga0213876_10010730
354 Ga0209563_100024
355 Ga0209677_103262
356 Ga0209758_1000001
357 Ga0207682_10031771
358 Ga0207680_10056892
359 Ga0207647_10056379
360 Ga0207645_10039450
361 Ga0207707_10016969
362 Ga0207695_10095021
363 Ga0207695_10102574
364 Ga0207671_10004493
365 Ga0207671_10011368
366 Ga0207649_10047863
367 Ga0207681_10002357
368 Ga0207681_10007939
369 Ga0207681_10099718
370 Ga0207650_10002400
371 Ga0207650_10015623
372 Ga0207659_10029979
373 Ga0207664_10005557
374 Ga0207644_10000237
375 Ga0207644_10003257
376 Ga0207709_10000139
377 Ga0207669_10000326
378 Ga0207669_10002220
379 Ga0207691_10003106
380 Ga0207661_10017292
381 Ga0207679_10008065
382 Ga0207651_10008721
383 Ga0207651_10025469
384 Ga0207712_10105880
385 Ga0207668_10000048
386 Ga0207668_10000115
387 Ga0207640_10009799
388 Ga0207658_10000021
389 Ga0207658_10000090
390 Ga0207658_10000240
391 Ga0207658_10035710
392 Ga0207677_10001607
393 Ga0207677_10252110
394 Ga0207703_10000765
395 Ga0207678_10114525
396 Ga0207641_10000040
397 Ga0207641_10000344
398 Ga0207641_10000565
399 Ga0207641_10020788
400 Ga0207641_10032350
401 Ga0207676_10017818
402 Ga0207675_100077741
403 Ga0207683_10001211
404 Ga0207683_10001648
405 Ga0207683_10003133
406 Ga0207683_10287419
407 Ga0207698_10002547
408 Ga0268266_10000036
409 Ga0268266_10037605
410 Ga0268266_10040420
411 Ga0268266_10079507
412 Ga0268264_10000075
413 Ga0268264_10000351
414 Ga0268264_10000592
415 Ga0268264_10003821
416 Ga0268264_10017842
417 Ga0307517_10010622
418 Ga0307515_10169991
419 Ga0265327_10000194
420 Ga0307513_10021538
421 Ga0307513_10240219
422 Ga0265314_10127735
423 Ga0307510_10041741
424 Ga0373925_0049256
425 Ga0395900_0552856
426 Ga0395898_0061670
427 Ga0395905_0087805
428 Ga0436364_0559939
429 Ga0400483_013583
430 Ga0400483_084164
431 Ga0400483_087768
432 Ga0400483_150155
433 Ga0400483_257781
434 Ga0400489_73338
435 Ga0436365_0431817
436 Ga0436365_1312663
437 Ga0436363_0370414
438 Ga0451577_0401092
439 Ga0453684_0009224
440 Ga0466957_0054546
441 Ga0466958_0017864
442 Ga0495617_013531
443 Ga0495627_037410
444 Ga0495629_0049598
445 Ga0495650_0000083
446 Ga0495580_0007615
447 Ga0495582_0001345
448 Ga0495584_0024985
449 Ga0495585_0009369
450 Ga0495596_0017204
451 Ga0495583_0000891
452 Ga0495583_0003977
453 Ga0495583_0014941
454 Ga0495606_0000215
455 Ga0495643_0000262
456 Ga0495643_0001897
457 Ga0495643_0033929
458 Ga0495648_0000167
459 Ga0495648_0030445
460 Ga0495648_0041299
461 Ga0495663_0004580
462 Ga0495663_0018983
463 Ga0495587_0019423
464 Ga0495597_0063963
465 Ga0495622_0007010
466 Ga0495633_0000185
467 Ga0495633_0009723
468 Ga0495668_0000033
469 Ga0495668_0015113
470 Ga0495625_0004906
471 Ga0495625_0007812
472 Ga0495661_0013290
473 Ga0495669_0000660
474 Ga0495649_0064586
475 Ga0495600_0001829
476 Ga0495674_0228535
477 Ga0495683_0008209
478 Ga0495687_000041
479 Ga0495677_0040005
480 Ga0495681_0015610
481 Ga0496101_0061272
482 Ga0496105_0211239
483 Ga0496107_0124178
484 Ga0496108_0018095
485 Ga0496109_0041223
486 Ga0496109_0088160
487 Ga0496110_0044179
488 Ga0496117_0010235
489 Ga0496118_0020704
490 Ga0496122_0003036
491 Ga0496123_0000026
492 Ga0496125_0005560
493 Ga0501034_0010921
494 Ga0501070_0164809
495 Ga0501044_0026440
496 nmdc:mga08y16_89969_c1
497 nmdc:mga0n895_139250_c1
498 Ga0500610_0000183
499 Ga0500643_001692
500 Ga0500595_000298
501 Ga0500636_0000795
502 2715500117
503 2830079160
504 2894657192
505 2939633140
506 2995396866
507 3001897280
508 8057105841

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02515

CoA_transf_3

CoA-transferase family III

66

439

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
4hl6-assembly2.cif.gz_C yfde from escherichia coli 0.9501 8 390
5yx6-assembly2.cif.gz_D crystal structure of rv3272 from m. tuberculosis orthorhombic form 0.9469 7 384
5yit-assembly2.cif.gz_D crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9451 7 385
4hl6-assembly2.cif.gz_C yfde from escherichia coli 0.9403 8 390
5yit-assembly3.cif.gz_E-2 crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9378 7 381
ID Description Score Start End Superfamily
4ed9A02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9828 237 328 3.30.1540.10
af_Q4V9F2_1_227_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9771 30 247 3.40.50.10540
af_Q9VDL4_46_327_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.976 8 294 3.40.50.10540
4ed9A02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9724 237 328 3.30.1540.10
af_Q9VDL4_46_327_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9692 8 294 3.40.50.10540
ID Description Score Start End GO Terms
AF-A0A4Y7RW99-F1-model_v4 Acetyl-CoA:oxalate CoA-transferase (EC 2.8.3.19) 0.9853 7 407 GO:0008410
AF-A0A1F9DFM9-F1-model_v4 Formyl-CoA transferase 0.9851 8 407 GO:0008410
AF-A0A7W7Q1P1-F1-model_v4 Formyl-CoA transferase (EC 2.8.3.16) 0.9839 8 407 GO:0033608
AF-A0A2U3LNA8-F1-model_v4 L-carnitine dehydratase/bile acid-inducible protein F 0.9828 8 407 GO:0008410
AF-A0A2J8UND6-F1-model_v4 SUGCT isoform 1 0.9828 6 245 GO:0005739
GO:0047369

Map