F364238

General Info

Members Datasets Scaffolds Average Seq Length
253 175 506 368

Family's Representative Sequence

Representative Sequence 3300037466|Ga0395898_0121827|Ga0395898_0121827_623_1846
Length 407
Sequence MLEPTQRLDEGALRALVPGFLAALVRRGEDFAAAEDALQEALLEALRVWPKHPPRDPGAWLATVATRRLVDVRRSDAARRGREERLLERREPEPANTEPGDDTLFLLFCCCHPDLSPASQVALTLRAVVGLTTREIADAFYVPEATMAQRISRAKRALRGRRLNQPGDLAVVLRVLYLVYTAGHAGRVDLAAEAIRLARQLALATEEPEARGLLALMLLNHARLPARFDAEGRIVTLDRQDRSLWDNREIAEGVRVLQSALALKRRGRYQFEAAIAALHDDAVNYSETDWQQILAWYDDLVALSDDPVRQDPASVLGRAVAVGHVLGSAAGLRETDRLREVLGDRHRWHAVRGYLHELGGDLLAAGAAYAEAARRATNVAERDHLVRQAARARAAELRTVALPRSSG

Samples

Sample ID Description Type Environment
1 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
56 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
85 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
86 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
87 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
88 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
89 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
90 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
91 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
92 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
93 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
94 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
95 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
96 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
97 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
100 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
101 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
102 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
103 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
107 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
111 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
114 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
115 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
116 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
117 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
118 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
119 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
120 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
121 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
122 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
123 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
124 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
125 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
126 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
127 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
128 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
133 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
134 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
135 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
138 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
139 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
140 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
141 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
142 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
143 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
144 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
145 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
146 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
147 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
148 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
149 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
150 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
151 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
152 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
161 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
166 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
169 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
170 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
171 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
174 2517572101 Frankia sp. DC12 Isolate Nodule
175 8002784119 Frankia sp. AgB1.9 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 99.21
Metatranscriptomes 0
Isolates 0.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.79
Rhizoplane 13.83
Rhizosphere 76.28
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395898_0121827 3300037466 Bacteria 2499
2 Ga0070658_10130680 3300005327 Bacteria 2093
3 Ga0070683_100046974 3300005329 Bacteria 3989
4 Ga0070683_100188817 3300005329 Bacteria 1956
5 Ga0068869_100021670 3300005334 Bacteria 4422
6 Ga0070682_100034151 3300005337 Bacteria 3095
7 Ga0068868_100036360 3300005338 Bacteria 3811
8 Ga0070689_100170273 3300005340 Bacteria 1764
9 Ga0070668_100037323 3300005347 Bacteria 3710
10 Ga0070669_100001540 3300005353 Bacteria 16673
11 Ga0070675_100105816 3300005354 Bacteria 2374
12 Ga0070659_100047378 3300005366 Bacteria 3371
13 Ga0070667_100000142 3300005367 Bacteria 90696
14 Ga0070714_100011008 3300005435 Bacteria 7165
15 Ga0070713_100239934 3300005436 Bacteria 1650
16 Ga0070710_10044495 3300005437 Bacteria 2463
17 Ga0070681_10119171 3300005458 Bacteria 2575
18 Ga0070698_100007888 3300005471 Bacteria 11521
19 Ga0070679_100128238 3300005530 Bacteria 2518
20 Ga0070684_100137554 3300005535 Bacteria 2207
21 Ga0070684_100162375 3300005535 Bacteria 2027
22 Ga0070665_100023105 3300005548 Bacteria 6264
23 Ga0070665_100023563 3300005548 Bacteria 6198
24 Ga0070665_100089193 3300005548 Bacteria 3090
25 Ga0068857_100262441 3300005577 Bacteria 1585
26 Ga0068856_100257736 3300005614 Bacteria 1759
27 Ga0068859_100057900 3300005617 Bacteria 3903
28 Ga0068864_100113236 3300005618 Bacteria 2418
29 Ga0068864_100282303 3300005618 Bacteria 1550
30 Ga0068861_100022654 3300005719 Bacteria 4528
31 Ga0068863_100000105 3300005841 Bacteria 90388
32 Ga0068863_100027591 3300005841 Bacteria 5417
33 Ga0068858_100051938 3300005842 Bacteria 3793
34 Ga0068858_100143119 3300005842 Bacteria 2245
35 Ga0068860_100000209 3300005843 Bacteria 92811
36 Ga0068862_100000211 3300005844 Bacteria 65382
37 Ga0081539_10000489 3300005985 Bacteria 83671
38 Ga0081539_10009829 3300005985 Bacteria 7901
39 Ga0081539_10022848 3300005985 Bacteria 4120
40 Ga0070717_10074770 3300006028 Bacteria 2833
41 Ga0070715_10004767 3300006163 Bacteria 4485
42 Ga0070715_10009239 3300006163 Bacteria 3468
43 Ga0070712_100245928 3300006175 Bacteria 1427
44 Ga0075428_100034966 3300006844 Bacteria 5539
45 Ga0075428_100219480 3300006844 Bacteria 2053
46 Ga0075430_100091157 3300006846 Bacteria 2549
47 Ga0075431_100012449 3300006847 Bacteria 8586
48 Ga0075431_100315762 3300006847 Bacteria 1576
49 Ga0075433_10002538 3300006852 Bacteria 13904
50 Ga0075433_10031107 3300006852 Bacteria 4560
51 Ga0075433_10177137 3300006852 Bacteria 1897
52 Ga0075434_100001203 3300006871 Bacteria 21514
53 Ga0075434_100240760 3300006871 Bacteria 1829
54 Ga0075429_100114230 3300006880 Bacteria 2360
55 Ga0068865_100084633 3300006881 Bacteria 2286
56 Ga0097620_100057897 3300006931 Bacteria 3903
57 Ga0075435_100040016 3300007076 Bacteria 3743
58 Ga0075435_100068825 3300007076 Bacteria 2884
59 Ga0099794_10093930 3300007265 Bacteria 1491
60 Ga0111539_10008375 3300009094 Bacteria 13158
61 Ga0105245_10024016 3300009098 Bacteria 5351
62 Ga0105247_10000105 3300009101 Bacteria 87578
63 Ga0105247_10000277 3300009101 Bacteria 47313
64 Ga0105248_10000242 3300009177 Bacteria 63110
65 Ga0105249_10000031 3300009553 Bacteria 220006
66 Ga0105249_10125550 3300009553 Bacteria 2443
67 Ga0157370_10049751 3300013104 Bacteria 4010
68 Ga0157369_10094607 3300013105 Bacteria 3189
69 Ga0163162_10027312 3300013306 Bacteria 5643
70 Ga0157372_10144156 3300013307 Bacteria 2747
71 Ga0213874_10002742 3300021377 Bacteria 3829
72 Ga0213876_10001296 3300021384 Bacteria 15747
73 Ga0213876_10143551 3300021384 Bacteria 1270
74 Ga0213875_10021916 3300021388 Bacteria 3058
75 Ga0207710_10000022 3300025900 Bacteria 335632
76 Ga0207710_10000231 3300025900 Bacteria 48233
77 Ga0207688_10009649 3300025901 Bacteria 5255
78 Ga0207705_10108563 3300025909 Bacteria 2048
79 Ga0207684_10006448 3300025910 Bacteria 10693
80 Ga0207654_10126446 3300025911 Bacteria 1612
81 Ga0207707_10068937 3300025912 Bacteria 3082
82 Ga0207660_10204282 3300025917 Bacteria 1544
83 Ga0207652_10057738 3300025921 Bacteria 3343
84 Ga0207681_10001734 3300025923 Bacteria 14002
85 Ga0207700_10035720 3300025928 Bacteria 3582
86 Ga0207706_10028954 3300025933 Bacteria 4944
87 Ga0207669_10025062 3300025937 Bacteria 3216
88 Ga0207665_10003352 3300025939 Bacteria 10727
89 Ga0207711_10001070 3300025941 Bacteria 26160
90 Ga0207711_10152014 3300025941 Bacteria 2089
91 Ga0207661_10062602 3300025944 Bacteria 3010
92 Ga0207712_10000029 3300025961 Bacteria 220014
93 Ga0207658_10000113 3300025986 Bacteria 88960
94 Ga0207677_10122771 3300026023 Bacteria 1957
95 Ga0207678_10079192 3300026067 Bacteria 2814
96 Ga0207708_10138069 3300026075 Bacteria 1910
97 Ga0207702_10287626 3300026078 Bacteria 1556
98 Ga0207641_10001920 3300026088 Bacteria 19944
99 Ga0207641_10011835 3300026088 Bacteria 7159
100 Ga0207641_10085828 3300026088 Bacteria 2743
101 Ga0207676_10253890 3300026095 Bacteria 1584
102 Ga0207674_10058518 3300026116 Bacteria 3903
103 Ga0207428_10005832 3300027907 Bacteria 11423
104 Ga0207428_10046965 3300027907 Bacteria 3470
105 Ga0268266_10012705 3300028379 Bacteria 7277
106 Ga0268266_10015875 3300028379 Bacteria 6445
107 Ga0268266_10094550 3300028379 Bacteria 2623
108 Ga0268266_10142199 3300028379 Bacteria 2154
109 Ga0268265_10000040 3300028380 Bacteria 194156
110 Ga0268264_10000017 3300028381 Bacteria 498037
111 Ga0265337_1000088 3300028556 Bacteria 44754
112 Ga0265326_10012052 3300028558 Bacteria 2545
113 Ga0265319_1000910 3300028563 Bacteria 18599
114 Ga0265334_10000438 3300028573 Bacteria 21852
115 Ga0265318_10017126 3300028577 Bacteria 2980
116 Ga0265323_10002612 3300028653 Bacteria 8174
117 Ga0265336_10001283 3300028666 Bacteria 11836
118 Ga0265338_10001991 3300028800 Bacteria 31759
119 Ga0265338_10004720 3300028800 Bacteria 18245
120 Ga0265324_10000952 3300029957 Bacteria 18072
121 Ga0265332_10001359 3300031238 Bacteria 13874
122 Ga0265325_10003076 3300031241 Bacteria 11027
123 Ga0265329_10052403 3300031242 Bacteria 1298
124 Ga0265327_10000167 3300031251 Bacteria 141405
125 Ga0265316_10012983 3300031344 Bacteria 7431
126 Ga0265314_10006964 3300031711 Bacteria 9890
127 Ga0307405_10037577 3300031731 Bacteria 2911
128 Ga0307410_10002522 3300031852 Bacteria 8853
129 Ga0307406_10050767 3300031901 Bacteria 2631
130 Ga0307406_10176435 3300031901 Bacteria 1552
131 Ga0307407_10038338 3300031903 Bacteria 2655
132 Ga0307407_10058110 3300031903 Bacteria 2247
133 Ga0307412_10082847 3300031911 Bacteria 2222
134 Ga0307409_100028986 3300031995 Bacteria 3954
135 Ga0307409_100053815 3300031995 Bacteria 3095
136 Ga0307409_100113473 3300031995 Bacteria 2278
137 Ga0307409_100158596 3300031995 Bacteria 1975
138 Ga0307409_100203685 3300031995 Bacteria 1772
139 Ga0307416_100102645 3300032002 Bacteria 2494
140 Ga0307416_100166110 3300032002 Bacteria 2047
141 Ga0307415_100153642 3300032126 Bacteria 1774
142 Ga0316212_1006191 3300033547 Bacteria 1737
143 Ga0395899_0173955 3300037312 Bacteria 1515
144 Ga0395900_0016125 3300037418 Bacteria 7611
145 Ga0395898_0007755 3300037466 Bacteria 11399
146 Ga0395898_0037886 3300037466 Bacteria 4780
147 Ga0395905_0016768 3300037471 Bacteria 6961
148 Ga0395905_0168129 3300037471 Bacteria 2060
149 Ga0436364_0037810 3300037853 Bacteria 9075
150 Ga0395901_0002526 3300038443 Bacteria 18540
151 Ga0395901_0003043 3300038443 Bacteria 16901
152 Ga0436365_0019265 3300039437 Bacteria 2645
153 Ga0436365_0459548 3300039437 Bacteria 4233
154 Ga0436365_0710249 3300039437 Bacteria 3761
155 Ga0436365_0971026 3300039437 Bacteria 7440
156 Ga0436365_1241061 3300039437 Bacteria 1991
157 Ga0436365_1359290 3300039437 Bacteria 16088
158 Ga0436365_1680610 3300039437 Bacteria 1918
159 Ga0436363_0425289 3300039450 Bacteria 27969
160 Ga0466963_0001790 3300044694 Bacteria 11690
161 Ga0466957_0021336 3300044842 Bacteria 3816
162 Ga0466960_0092678 3300044901 Bacteria 1543
163 Ga0466958_0102102 3300045836 Bacteria 1784
164 Ga0466967_0002257 3300045976 Bacteria 11876
165 Ga0466967_0055626 3300045976 Bacteria 3486
166 Ga0495653_0001833 3300046463 Bacteria 16750
167 Ga0495650_0000012 3300046471 Bacteria 613144
168 Ga0495608_0008447 3300046511 Bacteria 7213
169 Ga0495628_0014501 3300046516 Bacteria 6605
170 Ga0495667_0004242 3300046559 Bacteria 9655
171 Ga0495657_0004440 3300046675 Bacteria 11204
172 Ga0495669_0000030 3300046684 Bacteria 102988
173 Ga0495624_0000030 3300046690 Bacteria 91755
174 Ga0495600_0013633 3300046809 Bacteria 5113
175 Ga0495674_0007306 3300047319 Bacteria 10564
176 Ga0495680_0020449 3300047322 Bacteria 5569
177 Ga0495686_0000003 3300047472 Bacteria 899502
178 Ga0496100_0000010 3300048903 Bacteria 205204
179 Ga0496101_0000025 3300048904 Bacteria 205204
180 Ga0496101_0003047 3300048904 Bacteria 10341
181 Ga0496102_0000546 3300048905 Bacteria 40572
182 Ga0496102_0000941 3300048905 Bacteria 27484
183 Ga0496102_0143589 3300048905 Bacteria 2239
184 Ga0496103_0000368 3300048906 Bacteria 40572
185 Ga0496103_0000745 3300048906 Bacteria 24031
186 Ga0496104_0001422 3300048907 Bacteria 20726
187 Ga0496104_0316987 3300048907 Bacteria 1472
188 Ga0496104_0328503 3300048907 Bacteria 1442
189 Ga0496105_0028822 3300048908 Bacteria 4542
190 Ga0496105_0098127 3300048908 Bacteria 2420
191 Ga0496106_0000012 3300048909 Bacteria 205158
192 Ga0496106_0000049 3300048909 Bacteria 97550
193 Ga0496107_0000010 3300048910 Bacteria 205188
194 Ga0496108_0040896 3300048911 Bacteria 3867
195 Ga0496108_0059036 3300048911 Bacteria 3225
196 Ga0496108_0093459 3300048911 Bacteria 2558
197 Ga0496109_0000649 3300048912 Bacteria 28866
198 Ga0496109_0006167 3300048912 Bacteria 10076
199 Ga0496109_0182254 3300048912 Bacteria 1973
200 Ga0496109_0201203 3300048912 Bacteria 1872
201 Ga0496110_0074155 3300048913 Bacteria 3021
202 Ga0496110_0100933 3300048913 Bacteria 2587
203 Ga0496110_0130435 3300048913 Bacteria 2269
204 Ga0496111_0035246 3300048914 Bacteria 3575
205 Ga0496112_0007338 3300048915 Bacteria 9782
206 Ga0496112_0031268 3300048915 Bacteria 5162
207 Ga0496112_0043319 3300048915 Bacteria 4406
208 Ga0496112_0052170 3300048915 Bacteria 4013
209 Ga0496112_0123184 3300048915 Bacteria 2563
210 Ga0496113_0253770 3300048916 Bacteria 1404
211 Ga0496114_0183725 3300048917 Bacteria 1827
212 Ga0496114_0324408 3300048917 Bacteria 1361
213 Ga0496116_0000099 3300048919 Bacteria 195607
214 Ga0496116_0031693 3300048919 Bacteria 3779
215 Ga0496117_0000160 3300048920 Bacteria 141709
216 Ga0496118_0006369 3300048921 Bacteria 13008
217 Ga0496119_0005510 3300048922 Bacteria 12081
218 Ga0496120_0051160 3300048923 Bacteria 2361
219 Ga0496121_0012353 3300048924 Bacteria 9335
220 Ga0496125_0020181 3300048928 Bacteria 6262
221 Ga0496126_0000530 3300048929 Bacteria 73716
222 Ga0501034_0100228 3300049571 Bacteria 2891
223 Ga0501036_0247387 3300049572 Bacteria 1494
224 Ga0501038_0006583 3300049574 Bacteria 10744
225 Ga0501041_0070324 3300049577 Bacteria 2148
226 Ga0501070_0031653 3300049586 Bacteria 4432
227 Ga0501072_0018573 3300049588 Bacteria 5359
228 Ga0501075_0057918 3300049591 Bacteria 2918
229 Ga0501080_0043817 3300049742 Bacteria 4167
230 Ga0501035_0116992 3300049822 Bacteria 2333
231 nmdc:mga05p37_12438_c1 3300050507 Bacteria 10165
232 nmdc:mga05p37_221235_c1 3300050507 Bacteria 2285
233 nmdc:mga0qj67_18999_c1 3300050509 Bacteria 5246
234 nmdc:mga06r32_34424_c1 3300050510 Bacteria 4776
235 nmdc:mga08y16_3013_c1 3300050511 Bacteria 17384
236 nmdc:mga08y16_31027_c1 3300050511 Bacteria 5621
237 nmdc:mga08y16_6819_c1 3300050511 Bacteria 11981
238 nmdc:mga0n895_237721_c1 3300050512 Bacteria 1849
239 nmdc:mga0n895_30763_c1 3300050512 Bacteria 5134
240 nmdc:mga0n895_79698_c1 3300050512 Bacteria 3262
241 nmdc:mga0rr50_42941_c1 3300050513 Bacteria 3305
242 nmdc:mga0rr50_57356_c1 3300050513 Bacteria 2913
243 nmdc:mga0rr50_60044_c1 3300050513 Bacteria 2859
244 nmdc:mga0a205_18145_c1 3300050515 Bacteria 6611
245 nmdc:mga0a205_23993_c1 3300050515 Bacteria 5791
246 nmdc:mga0a205_31125_c1 3300050515 Bacteria 5110
247 nmdc:mga0a205_387765_c1 3300050515 Bacteria 1262
248 nmdc:mga0a205_93877_c1 3300050515 Bacteria 2899
249 Ga0501084_0003216 3300054114 Bacteria 13224
250 Ga0501082_0047657 3300060353 Bacteria 3693
251 Ga0530510_0140268 3300061734 Bacteria 1781
252 2517763720 2517572101 Bacteria 6884336
253 8002787441 8002784119 Bacteria 9788632
254 Ga0395898_0121827
255 Ga0070658_10130680
256 Ga0070683_100046974
257 Ga0070683_100188817
258 Ga0068869_100021670
259 Ga0070682_100034151
260 Ga0068868_100036360
261 Ga0070689_100170273
262 Ga0070668_100037323
263 Ga0070669_100001540
264 Ga0070675_100105816
265 Ga0070659_100047378
266 Ga0070667_100000142
267 Ga0070714_100011008
268 Ga0070713_100239934
269 Ga0070710_10044495
270 Ga0070681_10119171
271 Ga0070698_100007888
272 Ga0070679_100128238
273 Ga0070684_100137554
274 Ga0070684_100162375
275 Ga0070665_100023105
276 Ga0070665_100023563
277 Ga0070665_100089193
278 Ga0068857_100262441
279 Ga0068856_100257736
280 Ga0068859_100057900
281 Ga0068864_100113236
282 Ga0068864_100282303
283 Ga0068861_100022654
284 Ga0068863_100000105
285 Ga0068863_100027591
286 Ga0068858_100051938
287 Ga0068858_100143119
288 Ga0068860_100000209
289 Ga0068862_100000211
290 Ga0081539_10000489
291 Ga0081539_10009829
292 Ga0081539_10022848
293 Ga0070717_10074770
294 Ga0070715_10004767
295 Ga0070715_10009239
296 Ga0070712_100245928
297 Ga0075428_100034966
298 Ga0075428_100219480
299 Ga0075430_100091157
300 Ga0075431_100012449
301 Ga0075431_100315762
302 Ga0075433_10002538
303 Ga0075433_10031107
304 Ga0075433_10177137
305 Ga0075434_100001203
306 Ga0075434_100240760
307 Ga0075429_100114230
308 Ga0068865_100084633
309 Ga0097620_100057897
310 Ga0075435_100040016
311 Ga0075435_100068825
312 Ga0099794_10093930
313 Ga0111539_10008375
314 Ga0105245_10024016
315 Ga0105247_10000105
316 Ga0105247_10000277
317 Ga0105248_10000242
318 Ga0105249_10000031
319 Ga0105249_10125550
320 Ga0157370_10049751
321 Ga0157369_10094607
322 Ga0163162_10027312
323 Ga0157372_10144156
324 Ga0213874_10002742
325 Ga0213876_10001296
326 Ga0213876_10143551
327 Ga0213875_10021916
328 Ga0207710_10000022
329 Ga0207710_10000231
330 Ga0207688_10009649
331 Ga0207705_10108563
332 Ga0207684_10006448
333 Ga0207654_10126446
334 Ga0207707_10068937
335 Ga0207660_10204282
336 Ga0207652_10057738
337 Ga0207681_10001734
338 Ga0207700_10035720
339 Ga0207706_10028954
340 Ga0207669_10025062
341 Ga0207665_10003352
342 Ga0207711_10001070
343 Ga0207711_10152014
344 Ga0207661_10062602
345 Ga0207712_10000029
346 Ga0207658_10000113
347 Ga0207677_10122771
348 Ga0207678_10079192
349 Ga0207708_10138069
350 Ga0207702_10287626
351 Ga0207641_10001920
352 Ga0207641_10011835
353 Ga0207641_10085828
354 Ga0207676_10253890
355 Ga0207674_10058518
356 Ga0207428_10005832
357 Ga0207428_10046965
358 Ga0268266_10012705
359 Ga0268266_10015875
360 Ga0268266_10094550
361 Ga0268266_10142199
362 Ga0268265_10000040
363 Ga0268264_10000017
364 Ga0265337_1000088
365 Ga0265326_10012052
366 Ga0265319_1000910
367 Ga0265334_10000438
368 Ga0265318_10017126
369 Ga0265323_10002612
370 Ga0265336_10001283
371 Ga0265338_10001991
372 Ga0265338_10004720
373 Ga0265324_10000952
374 Ga0265332_10001359
375 Ga0265325_10003076
376 Ga0265329_10052403
377 Ga0265327_10000167
378 Ga0265316_10012983
379 Ga0265314_10006964
380 Ga0307405_10037577
381 Ga0307410_10002522
382 Ga0307406_10050767
383 Ga0307406_10176435
384 Ga0307407_10038338
385 Ga0307407_10058110
386 Ga0307412_10082847
387 Ga0307409_100028986
388 Ga0307409_100053815
389 Ga0307409_100113473
390 Ga0307409_100158596
391 Ga0307409_100203685
392 Ga0307416_100102645
393 Ga0307416_100166110
394 Ga0307415_100153642
395 Ga0316212_1006191
396 Ga0395899_0173955
397 Ga0395900_0016125
398 Ga0395898_0007755
399 Ga0395898_0037886
400 Ga0395905_0016768
401 Ga0395905_0168129
402 Ga0436364_0037810
403 Ga0395901_0002526
404 Ga0395901_0003043
405 Ga0436365_0019265
406 Ga0436365_0459548
407 Ga0436365_0710249
408 Ga0436365_0971026
409 Ga0436365_1241061
410 Ga0436365_1359290
411 Ga0436365_1680610
412 Ga0436363_0425289
413 Ga0466963_0001790
414 Ga0466957_0021336
415 Ga0466960_0092678
416 Ga0466958_0102102
417 Ga0466967_0002257
418 Ga0466967_0055626
419 Ga0495653_0001833
420 Ga0495650_0000012
421 Ga0495608_0008447
422 Ga0495628_0014501
423 Ga0495667_0004242
424 Ga0495657_0004440
425 Ga0495669_0000030
426 Ga0495624_0000030
427 Ga0495600_0013633
428 Ga0495674_0007306
429 Ga0495680_0020449
430 Ga0495686_0000003
431 Ga0496100_0000010
432 Ga0496101_0000025
433 Ga0496101_0003047
434 Ga0496102_0000546
435 Ga0496102_0000941
436 Ga0496102_0143589
437 Ga0496103_0000368
438 Ga0496103_0000745
439 Ga0496104_0001422
440 Ga0496104_0316987
441 Ga0496104_0328503
442 Ga0496105_0028822
443 Ga0496105_0098127
444 Ga0496106_0000012
445 Ga0496106_0000049
446 Ga0496107_0000010
447 Ga0496108_0040896
448 Ga0496108_0059036
449 Ga0496108_0093459
450 Ga0496109_0000649
451 Ga0496109_0006167
452 Ga0496109_0182254
453 Ga0496109_0201203
454 Ga0496110_0074155
455 Ga0496110_0100933
456 Ga0496110_0130435
457 Ga0496111_0035246
458 Ga0496112_0007338
459 Ga0496112_0031268
460 Ga0496112_0043319
461 Ga0496112_0052170
462 Ga0496112_0123184
463 Ga0496113_0253770
464 Ga0496114_0183725
465 Ga0496114_0324408
466 Ga0496116_0000099
467 Ga0496116_0031693
468 Ga0496117_0000160
469 Ga0496118_0006369
470 Ga0496119_0005510
471 Ga0496120_0051160
472 Ga0496121_0012353
473 Ga0496125_0020181
474 Ga0496126_0000530
475 Ga0501034_0100228
476 Ga0501036_0247387
477 Ga0501038_0006583
478 Ga0501041_0070324
479 Ga0501070_0031653
480 Ga0501072_0018573
481 Ga0501075_0057918
482 Ga0501080_0043817
483 Ga0501035_0116992
484 nmdc:mga05p37_12438_c1
485 nmdc:mga05p37_221235_c1
486 nmdc:mga0qj67_18999_c1
487 nmdc:mga06r32_34424_c1
488 nmdc:mga08y16_3013_c1
489 nmdc:mga08y16_31027_c1
490 nmdc:mga08y16_6819_c1
491 nmdc:mga0n895_237721_c1
492 nmdc:mga0n895_30763_c1
493 nmdc:mga0n895_79698_c1
494 nmdc:mga0rr50_42941_c1
495 nmdc:mga0rr50_57356_c1
496 nmdc:mga0rr50_60044_c1
497 nmdc:mga0a205_18145_c1
498 nmdc:mga0a205_23993_c1
499 nmdc:mga0a205_31125_c1
500 nmdc:mga0a205_387765_c1
501 nmdc:mga0a205_93877_c1
502 Ga0501084_0003216
503 Ga0501082_0047657
504 Ga0530510_0140268
505 2517763720
506 8002787441

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08281

Sigma70_r4_2

Sigma-70, region 4

108

158

0.95

PF20239

DUF6596

Family of unknown function (DUF6596)

168

261

0.93

PF04542

Sigma70_r2

Sigma-70 region 2

12

80

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
2avp-assembly1.cif.gz_A crystal structure of an 8 repeat consensus tpr superhelix 0.854 293 353
4gco-assembly1.cif.gz_A central domain of stress-induced protein-1 (sti-1) from c.elegans 0.8011 268 368
4j8e-assembly1.cif.gz_A middle domain of hsc70-interacting protein, crystal form i 0.791 268 353
2kcl-assembly1.cif.gz_A solution nmr structure of tetratricopeptide repeat domain protein sru_0103 from salinibacter ruber, northeast structural genomics consortium (nesg) target srr115c 0.7908 285 371
8arb-assembly1.cif.gz_A heterologous complex of shortened aeromonas hydrophila type iii secretion substrate ascx with yersinia enterocolitica chaperone yscy 0.7893 269 351
ID Description Score Start End Superfamily
af_Q8IUR5_683_793_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8499 269 364 1.25.40.10
af_A0A2R8PY91_1295_1431_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8409 269 379 1.25.40.10
af_Q17RB8_210_325_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8361 269 368 1.25.40.10
af_Q9CB03_549_635_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8324 293 368 1.25.40.10
af_D3YY23_198_314_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8301 269 368 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A6V8KWF5-F1-model_v4 DUF6596 domain-containing protein 0.9177 151 371
AF-W7V968-F1-model_v4 deleted 0.9161 197 374
AF-W7V968-F1-model_v4 deleted 0.9014 197 374
AF-A0A2P8DM05-F1-model_v4 RNA polymerase sigma-70 factor (ECF subfamily) 0.8945 171 372
AF-A0A6V8KWF5-F1-model_v4 DUF6596 domain-containing protein 0.8869 151 371

Map