F363391

General Info

Members Datasets Scaffolds Average Seq Length
252 183 504 361

Family's Representative Sequence

Representative Sequence 3300037466|Ga0395898_0027923|Ga0395898_0027923_4083_5411
Length 422
Sequence MGRAGKTSDRAAAWHDGADRAAAGPSASTAEIAGMRQALQLAARGLGTTSPNPVVGCVILDSAGEIVGEGFHEYRGGPHAEVRALADAGPRADGGTALVTLEPCAHTGLTGPCTEALIAAGVRRVVAAVSDPYHLASGGADILRRAGIDVEVGLLAAEAARLNEAWLTSVRLGRPHVTWKYAASLDGRLAAADGSSRWITGAAARADVHRLRAEADAVVVGSGTLIADDPHLAARNPFPHNGQPSAASHRATDVPDQRSWQVRQPLRVVVDTEARIRPEARVLDTSAPTLVAVAADADTAHLPPGADVARLPRSAGRGLDLHALLAELYRRDVIAVLLEGGPTLAGSFLAASLIDKVVGYLAPVVVGGDGLPMLAGPGAPTIADVLRLRIDEVIPIGPDIRITARLRNGEGLGMPGSGEREE

Samples

Sample ID Description Type Environment
1 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
86 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
87 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
88 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
89 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
90 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
93 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
96 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
97 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
98 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
99 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
100 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
101 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
104 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
105 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
106 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
107 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
108 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
109 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
110 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
111 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
112 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
113 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
114 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
115 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
116 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
117 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
118 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
119 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
120 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
121 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
122 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
123 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
124 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
125 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
129 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
144 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
145 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
153 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
154 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
155 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
156 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
157 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
158 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
159 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
160 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
161 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
162 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
163 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
164 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
165 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
166 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
167 2643221578 Streptomyces sp. Root63 Isolate Unclassified
168 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
169 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
170 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
171 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
172 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
173 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
174 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
175 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
176 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
177 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
178 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
179 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
180 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
181 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
182 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
183 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.06
Metatranscriptomes 0
Isolates 7.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.95
Nodule 0
Rhizoplane 1.98
Rhizosphere 87.7
Stem 0
Stem Tuber 0
Unclassified 0.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395898_0027923 3300037466 Bacteria 5660
2 Ga0065707_10082487 3300005295 Bacteria 14595
3 Ga0070658_10003299 3300005327 Bacteria 13312
4 Ga0070658_10047740 3300005327 Bacteria 3464
5 Ga0070676_10015551 3300005328 Bacteria 4199
6 Ga0068869_100016496 3300005334 Bacteria 4979
7 Ga0068869_100061334 3300005334 Bacteria 2758
8 Ga0070666_10027243 3300005335 Bacteria 3741
9 Ga0068868_100061254 3300005338 Bacteria 2981
10 Ga0070689_100160121 3300005340 Bacteria 1819
11 Ga0070668_100032062 3300005347 Bacteria 3998
12 Ga0070675_100010877 3300005354 Bacteria 7117
13 Ga0070671_100010017 3300005355 Bacteria 7612
14 Ga0070674_100003804 3300005356 Bacteria 8530
15 Ga0070673_100008348 3300005364 Bacteria 6880
16 Ga0070667_100062848 3300005367 Bacteria 3145
17 Ga0070705_100025033 3300005440 Bacteria 3230
18 Ga0070694_100017296 3300005444 Bacteria 4554
19 Ga0070708_100184393 3300005445 Bacteria 1951
20 Ga0070678_100004518 3300005456 Bacteria 7900
21 Ga0068867_100015840 3300005459 Bacteria 5351
22 Ga0068867_100098591 3300005459 Bacteria 2229
23 Ga0070685_10032863 3300005466 Bacteria 2909
24 Ga0070699_100000127 3300005518 Bacteria 70260
25 Ga0068853_100000010 3300005539 Bacteria 249824
26 Ga0068853_100006768 3300005539 Bacteria 9133
27 Ga0070672_100055067 3300005543 Bacteria 3115
28 Ga0070672_100065683 3300005543 Bacteria 2871
29 Ga0070704_100034096 3300005549 Bacteria 3449
30 Ga0068855_100053142 3300005563 Bacteria 4767
31 Ga0068852_100187315 3300005616 Bacteria 1950
32 Ga0068859_100041982 3300005617 Bacteria 4594
33 Ga0068859_100138920 3300005617 Bacteria 2503
34 Ga0068861_100019315 3300005719 Bacteria 4869
35 Ga0068861_100228354 3300005719 Bacteria 1577
36 Ga0068851_10000889 3300005834 Bacteria 12901
37 Ga0068863_100044313 3300005841 Bacteria 4223
38 Ga0068860_100062049 3300005843 Bacteria 3552
39 Ga0068860_100476934 3300005843 Bacteria 1243
40 Ga0068862_100031274 3300005844 Bacteria 4492
41 Ga0075365_10003161 3300006038 Bacteria 8405
42 Ga0075363_100095888 3300006048 Bacteria 1637
43 Ga0075364_10000982 3300006051 Bacteria 15077
44 Ga0075369_10040318 3300006186 Bacteria 1995
45 Ga0097621_100004319 3300006237 Bacteria 9875
46 Ga0075428_100019141 3300006844 Bacteria 7573
47 Ga0075428_100546835 3300006844 Unclassified 1238
48 Ga0075430_100000959 3300006846 Bacteria 22736
49 Ga0075430_100053003 3300006846 Bacteria 3416
50 Ga0075430_100083908 3300006846 Bacteria 2669
51 Ga0075431_100108237 3300006847 Bacteria 2868
52 Ga0075433_10006226 3300006852 Bacteria 9413
53 Ga0075433_10013438 3300006852 Bacteria 6657
54 Ga0075433_10045294 3300006852 Bacteria 3824
55 Ga0075434_100028331 3300006871 Bacteria 5502
56 Ga0075434_100047745 3300006871 Bacteria 4248
57 Ga0075434_100093332 3300006871 Bacteria 3013
58 Ga0075434_100117946 3300006871 Bacteria 2667
59 Ga0075434_100136263 3300006871 Bacteria 2474
60 Ga0075434_100341597 3300006871 Bacteria 1518
61 Ga0075429_100001427 3300006880 Bacteria 19614
62 Ga0075429_100033406 3300006880 Bacteria 4470
63 Ga0068865_100050028 3300006881 Bacteria 2885
64 Ga0068865_100052220 3300006881 Bacteria 2832
65 Ga0075436_100054284 3300006914 Bacteria 2766
66 Ga0097620_100041983 3300006931 Bacteria 4594
67 Ga0097620_100138914 3300006931 Bacteria 2503
68 Ga0075435_100007050 3300007076 Bacteria 7981
69 Ga0075435_100048205 3300007076 Bacteria 3422
70 Ga0099794_10088085 3300007265 Bacteria 1538
71 Ga0111539_10006480 3300009094 Bacteria 15078
72 Ga0111539_10011259 3300009094 Bacteria 11239
73 Ga0105245_10081885 3300009098 Bacteria 2951
74 Ga0105247_10074998 3300009101 Bacteria 2122
75 Ga0114129_10003203 3300009147 Bacteria 22958
76 Ga0114129_10003713 3300009147 Bacteria 21513
77 Ga0114129_10012341 3300009147 Bacteria 12162
78 Ga0114129_10037989 3300009147 Bacteria 6792
79 Ga0114129_10069887 3300009147 Bacteria 4896
80 Ga0114129_10180661 3300009147 Bacteria 2871
81 Ga0114129_10336171 3300009147 Bacteria 2004
82 Ga0157378_10304764 3300013297 Bacteria 1543
83 Ga0163162_10284592 3300013306 Bacteria 1785
84 Ga0163163_10057692 3300014325 Bacteria 3839
85 Ga0157380_10001723 3300014326 Bacteria 14417
86 Ga0207656_10015959 3300025321 Bacteria 2915
87 Ga0207680_10032925 3300025903 Bacteria 2951
88 Ga0207645_10000849 3300025907 Bacteria 25491
89 Ga0207645_10019066 3300025907 Bacteria 4504
90 Ga0207643_10008882 3300025908 Bacteria 5395
91 Ga0207705_10004990 3300025909 Bacteria 9954
92 Ga0207684_10002677 3300025910 Bacteria 17814
93 Ga0207646_10251047 3300025922 Bacteria 1598
94 Ga0207659_10016680 3300025926 Bacteria 4785
95 Ga0207687_10001065 3300025927 Bacteria 18613
96 Ga0207644_10049279 3300025931 Bacteria 3014
97 Ga0207704_10029828 3300025938 Bacteria 3049
98 Ga0207704_10032374 3300025938 Bacteria 2958
99 Ga0207691_10000006 3300025940 Bacteria 161922
100 Ga0207691_10084726 3300025940 Bacteria 2845
101 Ga0207689_10025697 3300025942 Bacteria 4933
102 Ga0207689_10072509 3300025942 Bacteria 2829
103 Ga0207667_10042233 3300025949 Bacteria 4848
104 Ga0207651_10060618 3300025960 Bacteria 2627
105 Ga0207658_10043804 3300025986 Bacteria 3255
106 Ga0207677_10037629 3300026023 Bacteria 3164
107 Ga0207639_10000018 3300026041 Bacteria 250081
108 Ga0207639_10208074 3300026041 Bacteria 1682
109 Ga0207678_10013437 3300026067 Bacteria 7187
110 Ga0207641_10190775 3300026088 Bacteria 1883
111 Ga0207648_10042743 3300026089 Bacteria 3979
112 Ga0207648_10048523 3300026089 Bacteria 3716
113 Ga0207675_100058045 3300026118 Bacteria 3612
114 Ga0207683_10000056 3300026121 Bacteria 84718
115 Ga0207683_10002355 3300026121 Bacteria 16533
116 Ga0207698_10111106 3300026142 Bacteria 2297
117 Ga0207428_10000191 3300027907 Bacteria 85144
118 Ga0268266_10038751 3300028379 Bacteria 4057
119 Ga0268265_10022131 3300028380 Bacteria 4462
120 Ga0268264_10005314 3300028381 Bacteria 10906
121 Ga0307517_10088876 3300028786 Bacteria 2549
122 Ga0265320_10048250 3300031240 Bacteria 2079
123 Ga0307408_100012132 3300031548 Bacteria 5704
124 Ga0307408_100132430 3300031548 Bacteria 1947
125 Ga0265314_10031196 3300031711 Bacteria 3938
126 Ga0265342_10035717 3300031712 Bacteria 3040
127 Ga0307516_10027823 3300031730 Bacteria 5729
128 Ga0307413_10082003 3300031824 Bacteria 2070
129 Ga0307410_10142519 3300031852 Bacteria 1775
130 Ga0307410_10199628 3300031852 Bacteria 1526
131 Ga0307407_10192598 3300031903 Bacteria 1360
132 Ga0307415_100463104 3300032126 Bacteria 1099
133 Ga0373930_0001360 3300034816 Bacteria 3608
134 Ga0373928_0002374 3300035084 Bacteria 3658
135 Ga0373932_0000707 3300035112 Bacteria 10066
136 Ga0373941_0002912 3300035115 Bacteria 3817
137 Ga0373962_0016802 3300035242 Bacteria 1890
138 Ga0373931_0000001 3300035691 Bacteria 634029
139 Ga0373931_0011991 3300035691 Bacteria 4194
140 Ga0373931_0130858 3300035691 Bacteria 1444
141 Ga0436364_1537825 3300037853 Bacteria 4525
142 Ga0395901_0007057 3300038443 Bacteria 11354
143 Ga0495592_0015873 3300046454 Bacteria 5713
144 Ga0495603_0000374 3300046455 Bacteria 24270
145 Ga0495603_0005398 3300046455 Bacteria 7628
146 Ga0495629_0000666 3300046459 Bacteria 27787
147 Ga0495629_0011189 3300046459 Bacteria 6515
148 Ga0495638_0000929 3300046460 Bacteria 29710
149 Ga0495651_0026963 3300046462 Bacteria 4473
150 Ga0495580_0002678 3300046472 Bacteria 15443
151 Ga0495664_0100498 3300046477 Bacteria 1742
152 Ga0495594_0010757 3300046499 Bacteria 4749
153 Ga0495620_0077358 3300046515 Bacteria 1351
154 Ga0495628_0022814 3300046516 Bacteria 5140
155 Ga0495643_0012930 3300046522 Bacteria 5018
156 Ga0495652_0008755 3300046529 Bacteria 9211
157 Ga0495640_0022486 3300046533 Bacteria 4607
158 Ga0495640_0034386 3300046533 Bacteria 3595
159 Ga0495634_0002349 3300046642 Bacteria 15796
160 Ga0495625_0016003 3300046660 Bacteria 5915
161 Ga0495657_0025964 3300046675 Bacteria 4154
162 Ga0495613_0002942 3300046689 Bacteria 12748
163 Ga0495613_0007138 3300046689 Bacteria 8317
164 Ga0495613_0162649 3300046689 Bacteria 1587
165 Ga0495604_0004161 3300047317 Bacteria 11481
166 Ga0495604_0023688 3300047317 Bacteria 4899
167 Ga0495676_0035734 3300047321 Bacteria 4154
168 Ga0495679_008312 3300047446 Bacteria 4231
169 Ga0495685_000996 3300047447 Bacteria 8619
170 Ga0495681_0013885 3300047470 Bacteria 4651
171 Ga0495614_0000213 3300048089 Bacteria 22483
172 Ga0496106_0024661 3300048909 Bacteria 4472
173 Ga0496112_0096914 3300048915 Bacteria 2920
174 Ga0496113_0015678 3300048916 Bacteria 5218
175 Ga0496114_0290108 3300048917 Bacteria 1443
176 Ga0496121_0017006 3300048924 Bacteria 7464
177 Ga0501031_0063630 3300049568 Bacteria 2403
178 Ga0501036_0102016 3300049572 Bacteria 2427
179 Ga0501039_0027369 3300049575 Bacteria 4384
180 Ga0501039_0263815 3300049575 Bacteria 1354
181 Ga0501040_0106312 3300049576 Bacteria 1961
182 Ga0501042_0029061 3300049578 Bacteria 3899
183 Ga0501047_0040082 3300049581 Bacteria 4530
184 Ga0501068_0088166 3300049584 Bacteria 1912
185 Ga0501074_0044919 3300049590 Bacteria 3197
186 Ga0501075_0047052 3300049591 Bacteria 3241
187 Ga0501076_0015945 3300049592 Bacteria 5687
188 Ga0501076_0102090 3300049592 Bacteria 2312
189 Ga0501081_0036890 3300049743 Bacteria 3334
190 Ga0501081_0068193 3300049743 Bacteria 2476
191 Ga0501044_0166445 3300049823 Bacteria 2179
192 Ga0501045_0180834 3300049824 Bacteria 1571
193 nmdc:mga00v17_1994_c1 3300050491 Bacteria 10531
194 nmdc:mga0yw44_2600_c1 3300050492 Bacteria 7755
195 nmdc:mga05p37_1116_c1 3300050507 Bacteria 30859
196 nmdc:mga05p37_13650_c1 3300050507 Bacteria 9734
197 nmdc:mga05p37_325600_c1 3300050507 Bacteria 1817
198 nmdc:mga05p37_60651_c1 3300050507 Bacteria 4657
199 nmdc:mga05p37_72751_c1 3300050507 Bacteria 4230
200 nmdc:mga05p37_84133_c1 3300050507 Bacteria 3920
201 nmdc:mga09592_13006_c1 3300050508 Bacteria 6793
202 nmdc:mga09592_52165_c1 3300050508 Bacteria 3452
203 nmdc:mga0qj67_21479_c1 3300050509 Bacteria 4952
204 nmdc:mga0qj67_84534_c1 3300050509 Bacteria 2545
205 nmdc:mga06r32_1680_c1 3300050510 Bacteria 19924
206 nmdc:mga08y16_1084_c1 3300050511 Bacteria 26806
207 nmdc:mga08y16_20625_c1 3300050511 Bacteria 6955
208 nmdc:mga0n895_341311_c1 3300050512 Bacteria 1517
209 nmdc:mga0n895_375398_c1 3300050512 Bacteria 1439
210 nmdc:mga0n895_44075_c1 3300050512 Bacteria 4351
211 nmdc:mga0n895_6153_c1 3300050512 Bacteria 10142
212 nmdc:mga0rr50_268293_c1 3300050513 Bacteria 1422
213 nmdc:mga0rr50_76426_c1 3300050513 Bacteria 2571
214 nmdc:mga08x19_61199_c1 3300050514 Bacteria 2439
215 nmdc:mga0a205_20558_c1 3300050515 Bacteria 6231
216 nmdc:mga0a205_212472_c1 3300050515 Bacteria 1822
217 nmdc:mga0a205_3217_c1 3300050515 Bacteria 14523
218 nmdc:mga0a205_3853_c1 3300050515 Bacteria 13443
219 nmdc:mga0a205_39877_c1 3300050515 Bacteria 4520
220 nmdc:mga0a205_50469_c1 3300050515 Bacteria 4017
221 Ga0500578_0082205 3300053086 Bacteria 2047
222 Ga0500566_0073450 3300053094 Bacteria 1917
223 Ga0500660_048714 3300053100 Bacteria 2110
224 Ga0500652_008208 3300053131 Bacteria 3468
225 Ga0500579_097164 3300053143 Bacteria 1555
226 Ga0500616_0034058 3300053153 Bacteria 2776
227 Ga0500622_0004112 3300053156 Bacteria 9318
228 Ga0500633_0003983 3300053160 Bacteria 3317
229 Ga0500587_005583 3300053739 Bacteria 1686
230 Ga0501084_0121400 3300054114 Bacteria 2197
231 Ga0501082_0044671 3300060353 Bacteria 3821
232 Ga0501082_0151602 3300060353 Bacteria 2014
233 2585300949 2582581312 Bacteria 7308206
234 2643904437 2643221578 Bacteria 9213798
235 2644406295 2643221673 Bacteria 9196637
236 2793978882 2791355406 Bacteria 11364898
237 2793981942 2791355406 Bacteria 11364898
238 2811846910 2808606982 Bacteria 7791042
239 2819699794 2818991463 Bacteria 7948711
240 2862292405 2862290372 Bacteria 7471434
241 2918502464 2918501144 Bacteria 8668083
242 2935393665 2935390628 Bacteria 7043367
243 2946052072 2946045630 Bacteria 8527308
244 2966604470 2966598605 Bacteria 7676064
245 2997605729 2997600082 Bacteria 9896405
246 3006328080 3006321560 Bacteria 8247479
247 8047894787 8047893842 Bacteria 11723082
248 8048131433 8048127548 Bacteria 11053136
249 8048364262 8048356638 Bacteria 11044339
250 8048365530 8048356638 Bacteria 11044339
251 8048371807 8048369669 Bacteria 11666822
252 8048380740 8048379754 Bacteria 11877923
253 Ga0395898_0027923
254 Ga0065707_10082487
255 Ga0070658_10003299
256 Ga0070658_10047740
257 Ga0070676_10015551
258 Ga0068869_100016496
259 Ga0068869_100061334
260 Ga0070666_10027243
261 Ga0068868_100061254
262 Ga0070689_100160121
263 Ga0070668_100032062
264 Ga0070675_100010877
265 Ga0070671_100010017
266 Ga0070674_100003804
267 Ga0070673_100008348
268 Ga0070667_100062848
269 Ga0070705_100025033
270 Ga0070694_100017296
271 Ga0070708_100184393
272 Ga0070678_100004518
273 Ga0068867_100015840
274 Ga0068867_100098591
275 Ga0070685_10032863
276 Ga0070699_100000127
277 Ga0068853_100000010
278 Ga0068853_100006768
279 Ga0070672_100055067
280 Ga0070672_100065683
281 Ga0070704_100034096
282 Ga0068855_100053142
283 Ga0068852_100187315
284 Ga0068859_100041982
285 Ga0068859_100138920
286 Ga0068861_100019315
287 Ga0068861_100228354
288 Ga0068851_10000889
289 Ga0068863_100044313
290 Ga0068860_100062049
291 Ga0068860_100476934
292 Ga0068862_100031274
293 Ga0075365_10003161
294 Ga0075363_100095888
295 Ga0075364_10000982
296 Ga0075369_10040318
297 Ga0097621_100004319
298 Ga0075428_100019141
299 Ga0075428_100546835
300 Ga0075430_100000959
301 Ga0075430_100053003
302 Ga0075430_100083908
303 Ga0075431_100108237
304 Ga0075433_10006226
305 Ga0075433_10013438
306 Ga0075433_10045294
307 Ga0075434_100028331
308 Ga0075434_100047745
309 Ga0075434_100093332
310 Ga0075434_100117946
311 Ga0075434_100136263
312 Ga0075434_100341597
313 Ga0075429_100001427
314 Ga0075429_100033406
315 Ga0068865_100050028
316 Ga0068865_100052220
317 Ga0075436_100054284
318 Ga0097620_100041983
319 Ga0097620_100138914
320 Ga0075435_100007050
321 Ga0075435_100048205
322 Ga0099794_10088085
323 Ga0111539_10006480
324 Ga0111539_10011259
325 Ga0105245_10081885
326 Ga0105247_10074998
327 Ga0114129_10003203
328 Ga0114129_10003713
329 Ga0114129_10012341
330 Ga0114129_10037989
331 Ga0114129_10069887
332 Ga0114129_10180661
333 Ga0114129_10336171
334 Ga0157378_10304764
335 Ga0163162_10284592
336 Ga0163163_10057692
337 Ga0157380_10001723
338 Ga0207656_10015959
339 Ga0207680_10032925
340 Ga0207645_10000849
341 Ga0207645_10019066
342 Ga0207643_10008882
343 Ga0207705_10004990
344 Ga0207684_10002677
345 Ga0207646_10251047
346 Ga0207659_10016680
347 Ga0207687_10001065
348 Ga0207644_10049279
349 Ga0207704_10029828
350 Ga0207704_10032374
351 Ga0207691_10000006
352 Ga0207691_10084726
353 Ga0207689_10025697
354 Ga0207689_10072509
355 Ga0207667_10042233
356 Ga0207651_10060618
357 Ga0207658_10043804
358 Ga0207677_10037629
359 Ga0207639_10000018
360 Ga0207639_10208074
361 Ga0207678_10013437
362 Ga0207641_10190775
363 Ga0207648_10042743
364 Ga0207648_10048523
365 Ga0207675_100058045
366 Ga0207683_10000056
367 Ga0207683_10002355
368 Ga0207698_10111106
369 Ga0207428_10000191
370 Ga0268266_10038751
371 Ga0268265_10022131
372 Ga0268264_10005314
373 Ga0307517_10088876
374 Ga0265320_10048250
375 Ga0307408_100012132
376 Ga0307408_100132430
377 Ga0265314_10031196
378 Ga0265342_10035717
379 Ga0307516_10027823
380 Ga0307413_10082003
381 Ga0307410_10142519
382 Ga0307410_10199628
383 Ga0307407_10192598
384 Ga0307415_100463104
385 Ga0373930_0001360
386 Ga0373928_0002374
387 Ga0373932_0000707
388 Ga0373941_0002912
389 Ga0373962_0016802
390 Ga0373931_0000001
391 Ga0373931_0011991
392 Ga0373931_0130858
393 Ga0436364_1537825
394 Ga0395901_0007057
395 Ga0495592_0015873
396 Ga0495603_0000374
397 Ga0495603_0005398
398 Ga0495629_0000666
399 Ga0495629_0011189
400 Ga0495638_0000929
401 Ga0495651_0026963
402 Ga0495580_0002678
403 Ga0495664_0100498
404 Ga0495594_0010757
405 Ga0495620_0077358
406 Ga0495628_0022814
407 Ga0495643_0012930
408 Ga0495652_0008755
409 Ga0495640_0022486
410 Ga0495640_0034386
411 Ga0495634_0002349
412 Ga0495625_0016003
413 Ga0495657_0025964
414 Ga0495613_0002942
415 Ga0495613_0007138
416 Ga0495613_0162649
417 Ga0495604_0004161
418 Ga0495604_0023688
419 Ga0495676_0035734
420 Ga0495679_008312
421 Ga0495685_000996
422 Ga0495681_0013885
423 Ga0495614_0000213
424 Ga0496106_0024661
425 Ga0496112_0096914
426 Ga0496113_0015678
427 Ga0496114_0290108
428 Ga0496121_0017006
429 Ga0501031_0063630
430 Ga0501036_0102016
431 Ga0501039_0027369
432 Ga0501039_0263815
433 Ga0501040_0106312
434 Ga0501042_0029061
435 Ga0501047_0040082
436 Ga0501068_0088166
437 Ga0501074_0044919
438 Ga0501075_0047052
439 Ga0501076_0015945
440 Ga0501076_0102090
441 Ga0501081_0036890
442 Ga0501081_0068193
443 Ga0501044_0166445
444 Ga0501045_0180834
445 nmdc:mga00v17_1994_c1
446 nmdc:mga0yw44_2600_c1
447 nmdc:mga05p37_1116_c1
448 nmdc:mga05p37_13650_c1
449 nmdc:mga05p37_325600_c1
450 nmdc:mga05p37_60651_c1
451 nmdc:mga05p37_72751_c1
452 nmdc:mga05p37_84133_c1
453 nmdc:mga09592_13006_c1
454 nmdc:mga09592_52165_c1
455 nmdc:mga0qj67_21479_c1
456 nmdc:mga0qj67_84534_c1
457 nmdc:mga06r32_1680_c1
458 nmdc:mga08y16_1084_c1
459 nmdc:mga08y16_20625_c1
460 nmdc:mga0n895_341311_c1
461 nmdc:mga0n895_375398_c1
462 nmdc:mga0n895_44075_c1
463 nmdc:mga0n895_6153_c1
464 nmdc:mga0rr50_268293_c1
465 nmdc:mga0rr50_76426_c1
466 nmdc:mga08x19_61199_c1
467 nmdc:mga0a205_20558_c1
468 nmdc:mga0a205_212472_c1
469 nmdc:mga0a205_3217_c1
470 nmdc:mga0a205_3853_c1
471 nmdc:mga0a205_39877_c1
472 nmdc:mga0a205_50469_c1
473 Ga0500578_0082205
474 Ga0500566_0073450
475 Ga0500660_048714
476 Ga0500652_008208
477 Ga0500579_097164
478 Ga0500616_0034058
479 Ga0500622_0004112
480 Ga0500633_0003983
481 Ga0500587_005583
482 Ga0501084_0121400
483 Ga0501082_0044671
484 Ga0501082_0151602
485 2585300949
486 2643904437
487 2644406295
488 2793978882
489 2793981942
490 2811846910
491 2819699794
492 2862292405
493 2918502464
494 2935393665
495 2946052072
496 2966604470
497 2997605729
498 3006328080
499 8047894787
500 8048131433
501 8048364262
502 8048365530
503 8048371807
504 8048380740

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00383

dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

28

129

0.93

PF01872

RibD_C

RibD C-terminal domain

175

402

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xv5-assembly1.cif.gz_B crystal structure of rib7 mutant s88e from methanosarcina mazei 0.8925 140 299
5xv0-assembly1.cif.gz_A crystal structure of rib7 mutant d33n from methanosarcina mazei 0.885 139 298
8dq9-assembly1.cif.gz_B crystal structure of gdp bound 3-dehydroquinate dehydratase i from klebsiella oxytoca 0.8826 1 333
8dq9-assembly1.cif.gz_B crystal structure of gdp bound 3-dehydroquinate dehydratase i from klebsiella oxytoca 0.8675 1 333
3zpc-assembly1.cif.gz_B acinetobacter baumannii ribd, form 1 0.8641 2 338
ID Description Score Start End Superfamily
af_Q8GWP5_63_211_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9978 2 133 3.40.140.10
4g3mB01 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9902 2 129 3.40.140.10
af_A0A0R4IDF5_228_326_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9715 21 34 2.60.40.10
2obcB01 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9583 2 129 3.40.140.10
af_Q2FXF9_2_122_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.957 14 133 3.40.140.10
ID Description Score Start End GO Terms
AF-A0A3M1UNK9-F1-model_v4 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) 1.006 2 90 GO:0008270
GO:0008835
GO:0009231
GO:0016491
AF-A0A6D0ET81-F1-model_v4 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) 1.003 2 119 GO:0008270
GO:0008835
GO:0009231
GO:0016491
AF-A0A7G2JZJ7-F1-model_v4 Riboflavin biosynthesis protein RibD (EC 3.5.4.26) 1.002 2 82 GO:0008835
GO:0009231
AF-A0A0K9TB55-F1-model_v4 deleted 1.001 2 135
AF-A0A379FM68-F1-model_v4 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) 1.001 2 112 GO:0008270
GO:0008835
GO:0009231

Map