F363228

General Info

Members Datasets Scaffolds Average Seq Length
252 195 505 329

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10041201|Ga0105239_100412013
Length 373
Sequence MKRNTHVARSSEVVHCQTRSSPDTVDMLLGVLKASGSEQRMTGTKTVPARTQQLELFERMVLIRRIEERLRADAAAGNLPGGVHLYIGQEAVATGVCAQLQVSDWITSTHRGHGHFLAKGGDPKAMMAEIWGKRTGICKGMGGSMHVADFSRGILGANGIVGGGFAIATGAAYSSKLRGDGRVAVTFFGDGASNQGVFMEALNVSSLWKLPLVFVCEHNQFSEFTPSATVTSGEIVDRARAFKIPCTIVDGNDVLAVWQAAGEAVERARRGDGPSFIEAHTYRIQGHLEAEDLFLGGGKYREKQEVEAWRQADRDPILRYRAELLRQGIVGSELDAVELRVSSTLAAAMKFAEESEAADPELPFQLMFTNRTV

Samples

Sample ID Description Type Environment
1 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
7 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
81 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
82 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
83 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
86 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
87 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
88 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
89 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
90 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
91 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
92 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
96 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
97 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
99 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
100 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
101 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
102 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
108 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
109 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
110 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
111 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
112 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
118 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
121 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
122 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
123 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
124 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
125 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
126 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
127 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
128 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
129 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
130 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
131 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
137 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
138 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
139 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
140 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
141 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
142 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
143 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
144 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
145 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
146 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
147 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
148 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
153 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
154 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
155 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
156 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
157 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
159 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
160 2554235283 Bacillus safensis VK Isolate Rhizosphere
161 2643221731 Bacillus sp. Root147 Isolate Unclassified
162 2643221735 Bacillus sp. Root920 Isolate Unclassified
163 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
164 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
165 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
166 2811994870 Bacillus sp. JB4 Isolate Unclassified
167 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
168 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
169 2818991441 Niallia circulans 3243 Isolate Rhizosphere
170 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
171 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
172 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
173 2842682962 Bacillus sp. R-72492 Isolate Unclassified
174 2842882022 Bacillus sp. R-71893 Isolate Unclassified
175 2849139964 Bacillus sp. R-71875 Isolate Unclassified
176 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
177 2857581216 Bacillus sp. R-71922 Isolate Unclassified
178 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
179 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
180 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
181 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
182 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
183 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
184 2919720352 Priestia megaterium 4340 Isolate Unclassified
185 2919726948 Bacillus pumilus 4489 Isolate Unclassified
186 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
187 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
188 2929004312 Priestia megaterium 1104 Isolate Unclassified
189 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
190 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
191 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
192 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
193 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
194 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
195 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.94
Metatranscriptomes 2.38
Isolates 14.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.37
Nodule 0
Rhizoplane 7.14
Rhizosphere 73.81
Stem 0
Stem Tuber 0
Unclassified 1.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105239_10041201 3300010375 Bacteria 5061
2 JGI25151J46595_10000175 3300003187 Bacteria 82963
3 rootH1_10008083 3300003316 Bacteria 11319
4 rootH1_10008083 3300003323 Bacteria 1229
5 rootL2_10184295 3300003322 Bacteria 9034
6 Ga0006562J51391_1000499 3300003578 Bacteria 40310
7 Ga0055532_1002678 3300003758 Archaea 3500
8 Ga0055528_1014109 3300003790 Bacteria 2978
9 Ga0068869_100094545 3300005334 Bacteria 2253
10 Ga0070680_100000170 3300005336 Bacteria 41524
11 Ga0070680_100024263 3300005336 Bacteria 4842
12 Ga0070682_100314421 3300005337 Bacteria 1154
13 Ga0070660_100025850 3300005339 Bacteria 4367
14 Ga0070660_100179497 3300005339 Bacteria 1713
15 Ga0070709_10000234 3300005434 Bacteria 35989
16 Ga0070714_100000787 3300005435 Bacteria 22526
17 Ga0070713_100000678 3300005436 Bacteria 21818
18 Ga0070713_100023125 3300005436 Bacteria 4816
19 Ga0070710_10000111 3300005437 Bacteria 38298
20 Ga0070711_100000718 3300005439 Bacteria 17329
21 Ga0070708_100028572 3300005445 Bacteria 4800
22 Ga0070663_100241060 3300005455 Bacteria 1427
23 Ga0070681_10009466 3300005458 Bacteria 9588
24 Ga0070681_10019977 3300005458 Bacteria 6711
25 Ga0070681_10026521 3300005458 Bacteria 5824
26 Ga0070681_10030171 3300005458 Bacteria 5440
27 Ga0070681_10032595 3300005458 Bacteria 5230
28 Ga0070681_10055284 3300005458 Bacteria 3953
29 Ga0070698_100001212 3300005471 Bacteria 28681
30 Ga0070698_100111350 3300005471 Bacteria 2702
31 Ga0070698_100147997 3300005471 Bacteria 2297
32 Ga0070699_100024188 3300005518 Bacteria 5234
33 Ga0070679_100000758 3300005530 Bacteria 27984
34 Ga0070679_100101177 3300005530 Bacteria 2868
35 Ga0070684_100060785 3300005535 Bacteria 3306
36 Ga0068853_100037033 3300005539 Bacteria 4150
37 Ga0070665_100000513 3300005548 Bacteria 55553
38 Ga0070665_100017800 3300005548 Bacteria 7133
39 Ga0070704_100146255 3300005549 Bacteria 1852
40 Ga0068855_100005919 3300005563 Bacteria 14909
41 Ga0068855_100053827 3300005563 Bacteria 4734
42 Ga0068855_100097247 3300005563 Bacteria 3391
43 Ga0068857_100071790 3300005577 Bacteria 3085
44 Ga0068854_100107259 3300005578 Bacteria 2102
45 Ga0068856_100543966 3300005614 Bacteria 1182
46 Ga0068858_100260948 3300005842 Bacteria 1647
47 Ga0081455_10000127 3300005937 Bacteria 88574
48 Ga0070717_10000610 3300006028 Bacteria 22955
49 Ga0070717_10120174 3300006028 Bacteria 2250
50 Ga0070716_100000116 3300006173 Bacteria 31406
51 Ga0070712_100008637 3300006175 Bacteria 6414
52 Ga0068871_100266606 3300006358 Bacteria 1495
53 Ga0099795_10054450 3300007788 Unclassified 1467
54 Ga0105240_10000420 3300009093 Bacteria 78578
55 Ga0105240_10003178 3300009093 Bacteria 25815
56 Ga0105240_10012669 3300009093 Bacteria 11623
57 Ga0105240_10022690 3300009093 Bacteria 8316
58 Ga0105240_10081350 3300009093 Bacteria 3981
59 Ga0105240_10190660 3300009093 Unclassified 2411
60 Ga0105240_10206427 3300009093 Bacteria 2299
61 Ga0105240_10475909 3300009093 Bacteria 1393
62 Ga0105245_10124177 3300009098 Bacteria 2414
63 Ga0105243_10112863 3300009148 Bacteria 2278
64 Ga0105243_10240994 3300009148 Bacteria 1609
65 Ga0105241_10016900 3300009174 Bacteria 5355
66 Ga0105242_10045472 3300009176 Bacteria 3558
67 Ga0105242_10095322 3300009176 Bacteria 2512
68 Ga0105238_10012247 3300009551 Bacteria 8648
69 Ga0105239_10044727 3300010375 Bacteria 4853
70 Ga0105246_10200538 3300011119 Bacteria 1551
71 Ga0157370_10007251 3300013104 Bacteria 12097
72 Ga0157369_10041947 3300013105 Bacteria 4993
73 Ga0157369_10134938 3300013105 Bacteria 2613
74 Ga0157369_10523264 3300013105 Unclassified 1227
75 Ga0157374_10061190 3300013296 Bacteria 3526
76 Ga0157372_10046639 3300013307 Bacteria 4811
77 Ga0157372_10130210 3300013307 Bacteria 2894
78 Ga0157372_10717511 3300013307 Bacteria 1163
79 Ga0197907_10252651 3300020069 Bacteria 1748
80 Ga0206351_10531273 3300020077 Bacteria 1197
81 Ga0206352_10952193 3300020078 Bacteria 3229
82 Ga0206350_10792586 3300020080 Bacteria 3095
83 Ga0224712_10003861 3300022467 Bacteria 3962
84 Ga0209147_100225 3300025229 Bacteria 56834
85 Ga0209147_101566 3300025229 Bacteria 7802
86 Ga0209673_1032791 3300025273 Bacteria 1595
87 Ga0209025_1000031 3300025294 Bacteria 422015
88 Ga0207696_1013774 3300025711 Bacteria 2799
89 Ga0207655_1029249 3300025728 Bacteria 2583
90 Ga0207685_10108682 3300025905 Bacteria 1198
91 Ga0207699_10000663 3300025906 Bacteria 16537
92 Ga0207707_10000094 3300025912 Bacteria 89818
93 Ga0207707_10026447 3300025912 Bacteria 5072
94 Ga0207707_10037318 3300025912 Bacteria 4246
95 Ga0207707_10039124 3300025912 Bacteria 4146
96 Ga0207707_10106626 3300025912 Bacteria 2449
97 Ga0207695_10012536 3300025913 Bacteria 10164
98 Ga0207695_10269520 3300025913 Bacteria 1598
99 Ga0207671_10041860 3300025914 Bacteria 3391
100 Ga0207671_10071375 3300025914 Bacteria 2590
101 Ga0207693_10001901 3300025915 Bacteria 18273
102 Ga0207663_10000251 3300025916 Bacteria 23611
103 Ga0207660_10035124 3300025917 Bacteria 3478
104 Ga0207660_10038999 3300025917 Bacteria 3318
105 Ga0207657_10100767 3300025919 Bacteria 2397
106 Ga0207652_10005400 3300025921 Bacteria 10370
107 Ga0207646_10178523 3300025922 Bacteria 1917
108 Ga0207694_10046058 3300025924 Bacteria 3370
109 Ga0207694_10285044 3300025924 Bacteria 1357
110 Ga0207687_10276747 3300025927 Bacteria 1344
111 Ga0207700_10000322 3300025928 Bacteria 28153
112 Ga0207700_10027389 3300025928 Bacteria 3990
113 Ga0207664_10000481 3300025929 Bacteria 28363
114 Ga0207686_10129185 3300025934 Bacteria 1731
115 Ga0207665_10000641 3300025939 Bacteria 23585
116 Ga0207661_10019867 3300025944 Bacteria 5013
117 Ga0207667_10007038 3300025949 Bacteria 13590
118 Ga0207667_10078448 3300025949 Bacteria 3423
119 Ga0207667_10079676 3300025949 Bacteria 3394
120 Ga0207639_10027202 3300026041 Bacteria 4163
121 Ga0268266_10017224 3300028379 Bacteria 6170
122 Ga0265318_10003383 3300028577 Bacteria 8038
123 Ga0307515_10145884 3300028794 Bacteria 2507
124 Ga0265338_10040563 3300028800 Bacteria 4371
125 Ga0316176_1027528 3300030732 Bacteria 2525
126 Ga0265316_10004391 3300031344 Bacteria 14054
127 Ga0307509_10000002 3300031507 Bacteria 607551
128 Ga0307509_10000089 3300031507 Bacteria 126291
129 Ga0307509_10221768 3300031507 Bacteria 1703
130 Ga0307408_100000335 3300031548 Bacteria 44857
131 Ga0265313_10009703 3300031595 Bacteria 6209
132 Ga0316579_10019737 3300031691 Bacteria 2982
133 Ga0316579_10025300 3300031691 Bacteria 2679
134 Ga0265314_10007387 3300031711 Bacteria 9534
135 Ga0316576_10132690 3300031727 Bacteria 1874
136 Ga0316576_10178305 3300031727 Bacteria 1603
137 Ga0307405_10000103 3300031731 Bacteria 35002
138 Ga0316577_10000083 3300031733 Bacteria 24809
139 Ga0316577_10021979 3300031733 Bacteria 3540
140 Ga0316577_10126220 3300031733 Bacteria 1439
141 Ga0307406_10000022 3300031901 Bacteria 96900
142 Ga0307412_10000060 3300031911 Bacteria 136643
143 Ga0373934_0025267 3300035086 Bacteria 2299
144 Ga0373923_0097272 3300035111 Bacteria 1294
145 Ga0373936_0078080 3300035113 Bacteria 1374
146 Ga0373953_0002725 3300035117 Bacteria 5363
147 Ga0373954_0021046 3300035118 Bacteria 2952
148 Ga0373957_0016228 3300035120 Bacteria 2576
149 Ga0316582_0000537 3300036647 Bacteria 14474
150 Ga0316582_0029598 3300036647 Bacteria 3328
151 Ga0316582_0139642 3300036647 Bacteria 1633
152 Ga0316584_0002688 3300036712 Bacteria 11354
153 Ga0316584_0019401 3300036712 Bacteria 4916
154 Ga0316584_0065802 3300036712 Bacteria 2716
155 Ga0395900_0014200 3300037418 Bacteria 8132
156 Ga0395905_0130530 3300037471 Bacteria 2363
157 Ga0316581_0003805 3300037588 Bacteria 3791
158 Ga0316581_0042574 3300037588 Bacteria 1385
159 Ga0395901_0003316 3300038443 Bacteria 16223
160 Ga0466969_0022194 3300044656 Bacteria 3278
161 Ga0466972_0012140 3300044658 Bacteria 4328
162 Ga0453683_0006368 3300044673 Bacteria 8108
163 Ga0466966_0156094 3300044684 Bacteria 1390
164 Ga0466970_0108303 3300044765 Unclassified 1517
165 Ga0466959_0003479 3300045049 Bacteria 10311
166 Ga0466959_0071980 3300045049 Bacteria 2503
167 Ga0451576_0097435 3300045051 Bacteria 3058
168 Ga0466967_0374912 3300045976 Bacteria 1381
169 Ga0495592_0103327 3300046454 Bacteria 2027
170 Ga0495651_0039543 3300046462 Bacteria 3671
171 Ga0495664_0035249 3300046477 Bacteria 2945
172 Ga0495585_0046798 3300046492 Bacteria 2411
173 Ga0495630_0038173 3300046517 Bacteria 3593
174 Ga0495640_0065515 3300046533 Bacteria 2453
175 Ga0495667_0053396 3300046559 Bacteria 2661
176 Ga0495634_0048423 3300046642 Bacteria 2861
177 Ga0495599_0208334 3300046678 Bacteria 1199
178 Ga0495604_0054713 3300047317 Bacteria 3078
179 Ga0495674_0048338 3300047319 Bacteria 3765
180 Ga0495680_0036408 3300047322 Bacteria 3950
181 Ga0495683_0013118 3300047323 Bacteria 4339
182 Ga0495675_0115480 3300047444 Bacteria 1674
183 Ga0495684_0049886 3300047471 Bacteria 3197
184 Ga0496100_0031772 3300048903 Bacteria 3285
185 Ga0496101_0006896 3300048904 Bacteria 7332
186 Ga0496102_0016405 3300048905 Bacteria 6469
187 Ga0496103_0083473 3300048906 Bacteria 2011
188 Ga0496103_0187824 3300048906 Bacteria 1328
189 Ga0496104_0003852 3300048907 Bacteria 12978
190 Ga0496105_0005408 3300048908 Bacteria 9691
191 Ga0496105_0184456 3300048908 Bacteria 1708
192 Ga0496106_0034545 3300048909 Bacteria 3777
193 Ga0496107_0052557 3300048910 Bacteria 2938
194 Ga0496108_0070365 3300048911 Bacteria 2952
195 Ga0496109_0004439 3300048912 Bacteria 11717
196 Ga0496110_0000945 3300048913 Bacteria 20337
197 Ga0496110_0033298 3300048913 Bacteria 4456
198 Ga0496111_0006045 3300048914 Bacteria 7821
199 Ga0496111_0249857 3300048914 Bacteria 1316
200 Ga0496113_0286859 3300048916 Bacteria 1316
201 Ga0496114_0546440 3300048917 Bacteria 1024
202 Ga0496116_0024273 3300048919 Bacteria 4489
203 Ga0496119_0016572 3300048922 Bacteria 5598
204 Ga0496122_0009615 3300048925 Bacteria 10125
205 Ga0496123_0037652 3300048926 Bacteria 3413
206 Ga0496124_0126698 3300048927 Bacteria 2033
207 Ga0496125_0034047 3300048928 Bacteria 4496
208 Ga0496126_0142657 3300048929 Bacteria 2060
209 Ga0501039_0278222 3300049575 Bacteria 1316
210 Ga0501071_0051594 3300049587 Bacteria 2965
211 Ga0495612_0008021 3300053078 Bacteria 4298
212 Ga0500572_006372 3300053111 Bacteria 2700
213 Ga0500617_017824 3300053124 Bacteria 3084
214 Ga0500588_0035595 3300053146 Unclassified 1466
215 Ga0500616_0000030 3300053153 Bacteria 415224
216 Ga0501082_0238456 3300060353 Bacteria 1583
217 2524003695 2523533628 Bacteria 4098242
218 2555470622 2554235283 Bacteria 3683090
219 2644718418 2643221731 Bacteria 5623886
220 2644741636 2643221735 Bacteria 3676263
221 2672335996 2671180330 Bacteria 5521719
222 2686995703 2684623153 Bacteria 3878815
223 2687496964 2687453109 Bacteria 3860091
224 2812314864 2811994870 Bacteria 3776934
225 2816864751 2816332186 Bacteria 5331395
226 2817478964 2816332295 Bacteria 4352468
227 2819570759 2818991441 Bacteria 5062707
228 2819707567 2818991465 Bacteria 5388835
229 2819725966 2818991468 Bacteria 3723169
230 2823526833 2823526263 Bacteria 3765752
231 2842683594 2842682962 Bacteria 5589973
232 2842882104 2842882022 Bacteria 6158489
233 2849142136 2849139964 Bacteria 5613304
234 2857462988 2857460504 Bacteria 5194327
235 2857581519 2857581216 Bacteria 5522813
236 2881644878 2881644220 Bacteria 5302661
237 2904527242 2904524088 Bacteria 5887454
238 2908668897 2908665501 Bacteria 3678115
239 2919096384 2919093281 Bacteria 3660974
240 2919144167 2919143609 Bacteria 6219228
241 2919519363 2919517244 Bacteria 5858162
242 2919720505 2919720352 Bacteria 5986006
243 2919730133 2919726948 Bacteria 3696050
244 2928095730 2928093941 Bacteria 5965005
245 2928962957 2928959182 Bacteria 4725774
246 2929007992 2929004312 Bacteria 5678476
247 2954775673 2954773129 Bacteria 3741715
248 2960322919 2960319331 Bacteria 5502575
249 2960381695 2960375949 Bacteria 5361395
250 3006859281 3006858327 Bacteria 4317835
251 8022894088 8022893055 Bacteria 5300455
252 8022915616 8022914991 Bacteria 5584517
253 8022953036 8022948649 Bacteria 5366783
254 Ga0105239_10041201
255 JGI25151J46595_10000175
256 rootH1_10008083
257 rootL2_10184295
258 Ga0006562J51391_1000499
259 Ga0055532_1002678
260 Ga0055528_1014109
261 Ga0068869_100094545
262 Ga0070680_100000170
263 Ga0070680_100024263
264 Ga0070682_100314421
265 Ga0070660_100025850
266 Ga0070660_100179497
267 Ga0070709_10000234
268 Ga0070714_100000787
269 Ga0070713_100000678
270 Ga0070713_100023125
271 Ga0070710_10000111
272 Ga0070711_100000718
273 Ga0070708_100028572
274 Ga0070663_100241060
275 Ga0070681_10009466
276 Ga0070681_10019977
277 Ga0070681_10026521
278 Ga0070681_10030171
279 Ga0070681_10032595
280 Ga0070681_10055284
281 Ga0070698_100001212
282 Ga0070698_100111350
283 Ga0070698_100147997
284 Ga0070699_100024188
285 Ga0070679_100000758
286 Ga0070679_100101177
287 Ga0070684_100060785
288 Ga0068853_100037033
289 Ga0070665_100000513
290 Ga0070665_100017800
291 Ga0070704_100146255
292 Ga0068855_100005919
293 Ga0068855_100053827
294 Ga0068855_100097247
295 Ga0068857_100071790
296 Ga0068854_100107259
297 Ga0068856_100543966
298 Ga0068858_100260948
299 Ga0081455_10000127
300 Ga0070717_10000610
301 Ga0070717_10120174
302 Ga0070716_100000116
303 Ga0070712_100008637
304 Ga0068871_100266606
305 Ga0099795_10054450
306 Ga0105240_10000420
307 Ga0105240_10003178
308 Ga0105240_10012669
309 Ga0105240_10022690
310 Ga0105240_10081350
311 Ga0105240_10190660
312 Ga0105240_10206427
313 Ga0105240_10475909
314 Ga0105245_10124177
315 Ga0105243_10112863
316 Ga0105243_10240994
317 Ga0105241_10016900
318 Ga0105242_10045472
319 Ga0105242_10095322
320 Ga0105238_10012247
321 Ga0105239_10044727
322 Ga0105246_10200538
323 Ga0157370_10007251
324 Ga0157369_10041947
325 Ga0157369_10134938
326 Ga0157369_10523264
327 Ga0157374_10061190
328 Ga0157372_10046639
329 Ga0157372_10130210
330 Ga0157372_10717511
331 Ga0197907_10252651
332 Ga0206351_10531273
333 Ga0206352_10952193
334 Ga0206350_10792586
335 Ga0224712_10003861
336 Ga0209147_100225
337 Ga0209147_101566
338 Ga0209673_1032791
339 Ga0209025_1000031
340 Ga0207696_1013774
341 Ga0207655_1029249
342 Ga0207685_10108682
343 Ga0207699_10000663
344 Ga0207707_10000094
345 Ga0207707_10026447
346 Ga0207707_10037318
347 Ga0207707_10039124
348 Ga0207707_10106626
349 Ga0207695_10012536
350 Ga0207695_10269520
351 Ga0207671_10041860
352 Ga0207671_10071375
353 Ga0207693_10001901
354 Ga0207663_10000251
355 Ga0207660_10035124
356 Ga0207660_10038999
357 Ga0207657_10100767
358 Ga0207652_10005400
359 Ga0207646_10178523
360 Ga0207694_10046058
361 Ga0207694_10285044
362 Ga0207687_10276747
363 Ga0207700_10000322
364 Ga0207700_10027389
365 Ga0207664_10000481
366 Ga0207686_10129185
367 Ga0207665_10000641
368 Ga0207661_10019867
369 Ga0207667_10007038
370 Ga0207667_10078448
371 Ga0207667_10079676
372 Ga0207639_10027202
373 Ga0268266_10017224
374 Ga0265318_10003383
375 Ga0307515_10145884
376 Ga0265338_10040563
377 Ga0316176_1027528
378 Ga0265316_10004391
379 Ga0307509_10000002
380 Ga0307509_10000089
381 Ga0307509_10221768
382 Ga0307408_100000335
383 Ga0265313_10009703
384 Ga0316579_10019737
385 Ga0316579_10025300
386 Ga0265314_10007387
387 Ga0316576_10132690
388 Ga0316576_10178305
389 Ga0307405_10000103
390 Ga0316577_10000083
391 Ga0316577_10021979
392 Ga0316577_10126220
393 Ga0307406_10000022
394 Ga0307412_10000060
395 Ga0373934_0025267
396 Ga0373923_0097272
397 Ga0373936_0078080
398 Ga0373953_0002725
399 Ga0373954_0021046
400 Ga0373957_0016228
401 Ga0316582_0000537
402 Ga0316582_0029598
403 Ga0316582_0139642
404 Ga0316584_0002688
405 Ga0316584_0019401
406 Ga0316584_0065802
407 Ga0395900_0014200
408 Ga0395905_0130530
409 Ga0316581_0003805
410 Ga0316581_0042574
411 Ga0395901_0003316
412 Ga0466969_0022194
413 Ga0466972_0012140
414 Ga0453683_0006368
415 Ga0466966_0156094
416 Ga0466970_0108303
417 Ga0466959_0003479
418 Ga0466959_0071980
419 Ga0451576_0097435
420 Ga0466967_0374912
421 Ga0495592_0103327
422 Ga0495651_0039543
423 Ga0495664_0035249
424 Ga0495585_0046798
425 Ga0495630_0038173
426 Ga0495640_0065515
427 Ga0495667_0053396
428 Ga0495634_0048423
429 Ga0495599_0208334
430 Ga0495604_0054713
431 Ga0495674_0048338
432 Ga0495680_0036408
433 Ga0495683_0013118
434 Ga0495675_0115480
435 Ga0495684_0049886
436 Ga0496100_0031772
437 Ga0496101_0006896
438 Ga0496102_0016405
439 Ga0496103_0083473
440 Ga0496103_0187824
441 Ga0496104_0003852
442 Ga0496105_0005408
443 Ga0496105_0184456
444 Ga0496106_0034545
445 Ga0496107_0052557
446 Ga0496108_0070365
447 Ga0496109_0004439
448 Ga0496110_0000945
449 Ga0496110_0033298
450 Ga0496111_0006045
451 Ga0496111_0249857
452 Ga0496113_0286859
453 Ga0496114_0546440
454 Ga0496116_0024273
455 Ga0496119_0016572
456 Ga0496122_0009615
457 Ga0496123_0037652
458 Ga0496124_0126698
459 Ga0496125_0034047
460 Ga0496126_0142657
461 Ga0501039_0278222
462 Ga0501071_0051594
463 Ga0495612_0008021
464 Ga0500572_006372
465 Ga0500617_017824
466 Ga0500588_0035595
467 Ga0500616_0000030
468 Ga0501082_0238456
469 2524003695
470 2555470622
471 2644718418
472 2644741636
473 2672335996
474 2686995703
475 2687496964
476 2812314864
477 2816864751
478 2817478964
479 2819570759
480 2819707567
481 2819725966
482 2823526833
483 2842683594
484 2842882104
485 2849142136
486 2857462988
487 2857581519
488 2881644878
489 2904527242
490 2908668897
491 2919096384
492 2919144167
493 2919519363
494 2919720505
495 2919730133
496 2928095730
497 2928962957
498 2929007992
499 2954775673
500 2960322919
501 2960381695
502 3006859281
503 8022894088
504 8022915616
505 8022953036

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00676

E1_dh

Dehydrogenase E1 component

58

361

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3exe-assembly2.cif.gz_E crystal structure of the pyruvate dehydrogenase (e1p) component of human pyruvate dehydrogenase complex 0.9663 5 316
2ozl-assembly1.cif.gz_C human pyruvate dehydrogenase s264e variant 0.9646 5 316
3exh-assembly2.cif.gz_E crystal structure of the pyruvate dehydrogenase (e1p) component of human pyruvate dehydrogenase complex 0.9642 5 316
3exh-assembly2.cif.gz_G crystal structure of the pyruvate dehydrogenase (e1p) component of human pyruvate dehydrogenase complex 0.9638 5 312
6cer-assembly2.cif.gz_G human pyruvate dehydrogenase complex e1 component v138m mutation 0.963 5 316
ID Description Score Start End Superfamily
af_A0A1D6GTY5_25_137_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.962 119 232 3.40.50.970
af_I1KHP5_58_413_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9587 1 323 3.40.50.970
1ni4C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9553 5 316 3.40.50.970
af_I1N1B9_20_344_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9543 9 290 3.40.50.970
af_I1KHP5_58_413_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9501 1 323 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A2S8LQ88-F1-model_v4 deleted 0.9894 119 254
AF-A0A3M1GEW5-F1-model_v4 Thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha 0.9843 13 197 GO:0004739
GO:0006086
AF-A0A6L7XSA5-F1-model_v4 Thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha 0.982 19 290 GO:0004739
GO:0006086
AF-A0A059WH10-F1-model_v4 Dehydrogenase E1 component 0.982 31 263 GO:0004739
GO:0006086
AF-T1D9T2-F1-model_v4 Pyruvate dehydrogenase (Acetyl-transferring) 0.982 85 245 GO:0004739
GO:0006086

Map