F362983
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 252 | 208 | 504 | 333 |
Family's Representative Sequence
| Representative Sequence | 3300005339|Ga0070660_100004911|Ga0070660_1000049115 |
| Length | 364 |
| Sequence | MDVPTPPGVIRLLRGWYNDRAMTLVQESTLKPLQIGPITIGTPLVLAPMAGVTCHAFRLLCKRYGVGLVVTELLSSHAIHYKNQKTFGMFDWTDAERPVSVQLFGGEPDMMAEASEVVEAAGADIVDLNMGCWVPKVAKTGAGATLLKDVCHAQAVVKAMVDAVKVPVTVKIRAGWDREHTTGVEFAKRAQDAGAAAIAVHARYANQGFTGTADWSIIRRVKDVVTIPVIGNGDVETAEDAKRMFEETGCDAVMIGRAAMGNPWLFADVKQFLETGTHRPAPTLEERIEAGFFRLKTLAATPNVGEVRAVKEMRGQLTHYFKGFHGVSALRNLIVQATSIQQVEDLLYHESRRDKNVEHVEGTE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300002987 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB | Metagenome | Endosphere |
| 3 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 4 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 5 | 3300003751 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 | Metagenome | Endosphere |
| 6 | 3300003758 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 | Metagenome | Endosphere |
| 7 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 8 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 12 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 13 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 14 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 15 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 16 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 17 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 19 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 20 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 21 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 22 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 23 | 3300025224 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 24 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 25 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 26 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 27 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 28 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300027252 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300027312 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300030083 | Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 | Metagenome | Unclassified |
| 42 | 3300030500 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) | Metagenome | Rhizosphere |
| 43 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 44 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 45 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 46 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 47 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 48 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 49 | 3300038705 | Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 | Metagenome | Unclassified |
| 50 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 51 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 52 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 53 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 54 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 55 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 56 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 57 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 58 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 59 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 60 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 61 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 66 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 67 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 68 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 69 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 70 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 71 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 72 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 73 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 74 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 75 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 76 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 77 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 78 | 3300049127 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 79 | 3300049132 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 80 | 3300049161 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 81 | 3300049528 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 82 | 3300049529 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_A_2_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 83 | 3300049533 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 84 | 3300049537 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 85 | 3300049551 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 86 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 87 | 3300049661 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control | Metagenome | Rhizosphere |
| 88 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 89 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 90 | 3300049851 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought | Metagenome | Rhizosphere |
| 91 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 92 | 2510917027 | Brevibacillus sp. CF112 | Isolate | Rhizosphere |
| 93 | 2511231119 | Bacillus velezensis CAU B946 | Isolate | Rhizosphere |
| 94 | 2512564013 | Brevibacillus sp. BC25 | Isolate | Rhizosphere |
| 95 | 2540341094 | Bacillus subtilis XF-1 | Isolate | Rhizosphere |
| 96 | 2545555800 | Bacillus amyloliquefaciens EGD-AQ14 | Isolate | Rhizosphere |
| 97 | 2551306519 | Bacillus sp. WBUNB004 | Isolate | Rhizosphere |
| 98 | 2554235283 | Bacillus safensis VK | Isolate | Rhizosphere |
| 99 | 2554235469 | Sporolactobacillus laevolacticus DSM 442 | Isolate | Rhizosphere |
| 100 | 2576861599 | Bacillus amyloliquefaciens EGD-AQ14 | Isolate | Rhizosphere |
| 101 | 2593339131 | Bacillus sp. UNCCL81 | Isolate | Unclassified |
| 102 | 2593339198 | Paenibacillus sp. UNCCL117 | Isolate | Unclassified |
| 103 | 2630968484 | Bacillus methylotrophicus KACC 13105 | Isolate | Rhizosphere |
| 104 | 2643221729 | Bacillus sp. Root11 | Isolate | Unclassified |
| 105 | 2643221730 | Bacillus sp. Root131 | Isolate | Unclassified |
| 106 | 2643221735 | Bacillus sp. Root920 | Isolate | Unclassified |
| 107 | 2648501850 | Bacillus amyloliquefaciens RHNK22 | Isolate | Rhizosphere |
| 108 | 2671180330 | Peribacillus simplex SH-B26 | Isolate | Unclassified |
| 109 | 2671180844 | Bacillus amyloliquefaciens Bs006 | Isolate | Unclassified |
| 110 | 2684622632 | Bacillus cereus 905 | Isolate | Unclassified |
| 111 | 2684623153 | Bacillus pumilus SH-B9 | Isolate | Unclassified |
| 112 | 2687453109 | Bacillus pumilus SH-B11 | Isolate | Unclassified |
| 113 | 2695420354 | Bacillus sp. Co1-6 | Isolate | Unclassified |
| 114 | 2695420987 | Bacillus thuringiensis KNU-07 | Isolate | Unclassified |
| 115 | 2703719227 | Bacillus mycoides GOE6 | Isolate | Rhizosphere |
| 116 | 2711768088 | Sporolactobacillus terrae DSM 11697 | Isolate | Rhizosphere |
| 117 | 2716884898 | Bacillus methylotrophicus FKM10 | Isolate | Rhizosphere |
| 118 | 2718218445 | Bacillus sp. B25(2016b) | Isolate | Rhizosphere |
| 119 | 2738541295 | Bacillus sp. OK085 | Isolate | Unclassified |
| 120 | 2738541299 | Paenisporosarcina sp. OV554 | Isolate | Unclassified |
| 121 | 2738541358 | Bacillus sp. OV752 | Isolate | Unclassified |
| 122 | 2738543006 | Bacillus sp. OK077 | Isolate | Unclassified |
| 123 | 2738543010 | Bacillus sp. YR335 | Isolate | Unclassified |
| 124 | 2757320391 | Bacillus sp. NFR08 | Isolate | Rhizoplane |
| 125 | 2775507177 | Bacillus sp. AFS055030 | Isolate | Unclassified |
| 126 | 2775507192 | Bacillus sp. AFS041924 | Isolate | Unclassified |
| 127 | 2788500588 | Lysinibacillus sp. YS11 | Isolate | Unclassified |
| 128 | 2791355222 | Paenibacillus oryzae 1DrF-4 | Isolate | Unclassified |
| 129 | 2808606399 | Bacillus sp. SJZ110 | Isolate | Rhizosphere |
| 130 | 2811994870 | Bacillus sp. JB4 | Isolate | Unclassified |
| 131 | 2816332186 | Peribacillus frigoritolerans 3612 | Isolate | Unclassified |
| 132 | 2816332295 | Bacillus paralicheniformis MDJK30 | Isolate | Rhizosphere |
| 133 | 2818991443 | Bacillus thuringiensis 1230 | Isolate | Unclassified |
| 134 | 2818991451 | Lysinibacillus fusiformis 3193 | Isolate | Unclassified |
| 135 | 2818991468 | Bacillus safensis 3300 | Isolate | Rhizosphere |
| 136 | 2823526263 | Bacillus altitudinis P-10 | Isolate | Unclassified |
| 137 | 2831905167 | Ammoniphilus oxalaticus RAOx-1 | Isolate | Rhizosphere |
| 138 | 2842682962 | Bacillus sp. R-72492 | Isolate | Unclassified |
| 139 | 2849139964 | Bacillus sp. R-71875 | Isolate | Unclassified |
| 140 | 2852673933 | Sporosarcina sp. JAI121 | Isolate | Rhizosphere |
| 141 | 2857472729 | Cohnella sp. R-74144 | Isolate | Unclassified |
| 142 | 2857581216 | Bacillus sp. R-71922 | Isolate | Unclassified |
| 143 | 2857604169 | Domibacillus sp. R-71921 | Isolate | Unclassified |
| 144 | 2857609550 | Domibacillus sp. R-71929 | Isolate | Unclassified |
| 145 | 2860837431 | Bacillus sp. WR11 | Isolate | Unclassified |
| 146 | 2864997549 | Paenibacillus sp. R-72005 | Isolate | Unclassified |
| 147 | 2877768649 | Bacillus amyloliquefaciens Y14 | Isolate | Rhizosphere |
| 148 | 2880169592 | Bacillus velezensis T20E-257 | Isolate | Unclassified |
| 149 | 2881644220 | Siminovitchia terrae LMG 29736 | Isolate | Rhizosphere |
| 150 | 2889049205 | Paenibacillus rhizovicinus 14171R-81 | Isolate | Rhizosphere |
| 151 | 2889295896 | Paenibacillus sp. PvR098 | Isolate | Rhizosphere |
| 152 | 2897109615 | Bacillus amyloliquefaciens YP6 | Isolate | Unclassified |
| 153 | 2898907183 | Brevibacillus sp. SYP-B805 | Isolate | Rhizosphere |
| 154 | 2904560550 | Bacillus velezensis 1780 | Isolate | Rhizosphere |
| 155 | 2904606771 | Lysinibacillus macroides 1284 | Isolate | Rhizosphere |
| 156 | 2908665501 | Bacillus pumilus 1391 | Isolate | Rhizosphere |
| 157 | 2915597211 | Brevibacillus brevis Ag35 | Isolate | Nodule |
| 158 | 2915606848 | Brevibacillus sp. HD1.4A | Isolate | Rhizosphere |
| 159 | 2919093281 | Bacillus safensis 1383 | Isolate | Rhizosphere |
| 160 | 2919414237 | Neobacillus niacini 3240 | Isolate | Rhizosphere |
| 161 | 2919726948 | Bacillus pumilus 4489 | Isolate | Unclassified |
| 162 | 2929183550 | Brevibacillus sp. R-71971 Hybrid assembly | Isolate | Unclassified |
| 163 | 2929233124 | Bacillus sp. R-74298 Hybrid assembly | Isolate | Unclassified |
| 164 | 2936340661 | Gottfriedia acidiceleris 1-17 | Isolate | Rhizosphere |
| 165 | 2936361878 | Neobacillus endophyticus BRMEA1 | Isolate | Unclassified |
| 166 | 2938917290 | Bacillus sp. CR71 | Isolate | Unclassified |
| 167 | 2939593269 | Lysinibacillus parviboronicapiens 736 | Isolate | Rhizosphere |
| 168 | 2947426588 | Bacillus sp. RZ2MS9 | Isolate | Rhizosphere |
| 169 | 2954773129 | Bacillus sp. TBS-096 | Isolate | Rhizosphere |
| 170 | 2956897341 | Ectobacillus funiculus W18-2 | Isolate | Rhizosphere |
| 171 | 2962290636 | Bacillus subtilis TLO3 | Isolate | Rhizosphere |
| 172 | 2964375228 | Anaerobacillus alkaliphilus B16-10 | Isolate | Rhizosphere |
| 173 | 2965761152 | Bacillus sp. COPE52 | Isolate | Unclassified |
| 174 | 2969136845 | Bacillus subtilis TLO3 | Isolate | Rhizosphere |
| 175 | 2969141011 | Bacillus velezensis MH25 | Isolate | Unclassified |
| 176 | 2969765954 | Bacillus intestinalis GM2 | Isolate | Rhizosphere |
| 177 | 2969770375 | Bacillus subtilis GM5 | Isolate | Rhizosphere |
| 178 | 2971893375 | Bacillus sp. HNA3 | Isolate | Rhizosphere |
| 179 | 2977254563 | Bacillus sp. SORGH_AS 510 | Isolate | Unclassified |
| 180 | 2979083700 | Bacillus toyonensis SORGH_AS 407 | Isolate | Unclassified |
| 181 | 2980125574 | Paenibacillus sp. tmac-D7 | Isolate | Unclassified |
| 182 | 2980492589 | Bacillus subtilis GQJK2 | Isolate | Rhizosphere |
| 183 | 2981284811 | Paenibacillus sp. PvR052 | Isolate | Rhizosphere |
| 184 | 2981289755 | Paenibacillus sp. PvR148 | Isolate | Rhizosphere |
| 185 | 2981980479 | Paenibacillus sp. PvR018 | Isolate | Rhizosphere |
| 186 | 2981985349 | Paenibacillus sp. PvR053 | Isolate | Rhizosphere |
| 187 | 2990275345 | Bacillus sp. SLBN-46 | Isolate | Unclassified |
| 188 | 3001267043 | Bacillus sp. FJAT-49870 | Isolate | Rhizosphere |
| 189 | 3001272096 | Lederbergia citrisecunda FJAT-49732 | Isolate | Rhizosphere |
| 190 | 3001892409 | Neobacillus rhizophilus FJAT-49825 | Isolate | Rhizosphere |
| 191 | 3006858327 | Bacillus paralicheniformis SUBG0010 | Isolate | Unclassified |
| 192 | 3006973921 | Bacillus sp. FJAT-49736 | Isolate | Rhizosphere |
| 193 | 3006978542 | Bacillus sp. FJAT-49705 | Isolate | Rhizosphere |
| 194 | 3006984091 | Lederbergia citrea FJAT-49754 | Isolate | Rhizosphere |
| 195 | 3006988479 | Bacillus sp. FJAT-49711 | Isolate | Rhizosphere |
| 196 | 8022621104 | Bacillus sp. PIC28 | Isolate | Rhizosphere |
| 197 | 8022630665 | Bacillus sp. PW192 | Isolate | Rhizosphere |
| 198 | 8022653035 | Bacillus sp. Rc4 | Isolate | Unclassified |
| 199 | 8022792930 | Bacillus sp. Xin | Isolate | Rhizosphere |
| 200 | 8022948649 | Bacillus endophyticus FH5 | Isolate | Rhizosphere |
| 201 | 8023438354 | Bacillus sp. BH2 | Isolate | Unclassified |
| 202 | 8023444577 | Bacillus sp. BH32 | Isolate | Unclassified |
| 203 | 8051952484 | Bacillus amyloliquefaciens K2 | Isolate | Rhizosphere |
| 204 | 8052174270 | Bacillus velezensis CH13 | Isolate | Rhizosphere |
| 205 | 8054280661 | Metabacillus kandeliae GX 13764 | Isolate | Rhizosphere |
| 206 | 8055531788 | Lysinibacillus pakistanensis LY1 | Isolate | Rhizosphere |
| 207 | 8057582654 | Bacillus arachidis YX15 | Isolate | Rhizosphere |
| 208 | 8057632132 | Cytobacillus kochii RZ2 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 49.21 |
| Metatranscriptomes | 4.37 |
| Isolates | 46.43 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 13.49 |
| Nodule | 0.4 |
| Rhizoplane | 3.17 |
| Rhizosphere | 56.75 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.79 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070660_100004911 | 3300005339 | Bacteria | 9246 |
| 2 | JGI25159J45721_1005495 | 3300002987 | Bacteria | 3975 |
| 3 | JGI25151J46595_10000294 | 3300003187 | Bacteria | 55267 |
| 4 | JGI25151J46595_10004784 | 3300003187 | Bacteria | 7095 |
| 5 | JGI25151J46595_10007909 | 3300003187 | Bacteria | 5161 |
| 6 | JGI25151J46595_10009605 | 3300003187 | Bacteria | 4564 |
| 7 | JGI25151J46595_10044580 | 3300003187 | Bacteria | 1574 |
| 8 | JGI25151J46595_10052048 | 3300003187 | Bacteria | 1381 |
| 9 | JGI25151J46595_10058766 | 3300003187 | Bacteria | 1242 |
| 10 | Ga0006562J51391_1000026 | 3300003578 | Bacteria | 55240 |
| 11 | Ga0006562J51391_1028952 | 3300003578 | Bacteria | 1456 |
| 12 | Ga0055538_1000645 | 3300003751 | Bacteria | 11093 |
| 13 | Ga0055532_1000183 | 3300003758 | Bacteria | 53163 |
| 14 | Ga0055536_1017141 | 3300003781 | Bacteria | 2383 |
| 15 | Ga0070658_10016542 | 3300005327 | Bacteria | 5902 |
| 16 | Ga0070660_100237771 | 3300005339 | Bacteria | 1483 |
| 17 | Ga0070714_100064463 | 3300005435 | Bacteria | 3154 |
| 18 | Ga0070711_100140806 | 3300005439 | Bacteria | 1808 |
| 19 | Ga0105244_10014498 | 3300009036 | Bacteria | 4554 |
| 20 | Ga0105244_10015912 | 3300009036 | Bacteria | 4302 |
| 21 | Ga0105244_10019501 | 3300009036 | Bacteria | 3783 |
| 22 | Ga0105244_10065324 | 3300009036 | Bacteria | 1823 |
| 23 | Ga0105244_10099153 | 3300009036 | Bacteria | 1427 |
| 24 | Ga0105250_10007983 | 3300009092 | Bacteria | 4517 |
| 25 | Ga0105250_10013710 | 3300009092 | Bacteria | 3339 |
| 26 | Ga0105250_10014594 | 3300009092 | Bacteria | 3224 |
| 27 | Ga0105240_10231933 | 3300009093 | Unclassified | 2145 |
| 28 | Ga0105245_10090357 | 3300009098 | Bacteria | 2816 |
| 29 | Ga0105241_10089414 | 3300009174 | Bacteria | 2426 |
| 30 | Ga0105237_10000024 | 3300009545 | Bacteria | 223776 |
| 31 | Ga0105238_10035708 | 3300009551 | Bacteria | 5052 |
| 32 | Ga0105239_10012422 | 3300010375 | Bacteria | 9485 |
| 33 | Ga0105246_10006639 | 3300011119 | Bacteria | 7076 |
| 34 | Ga0157371_10100360 | 3300013102 | Bacteria | 2053 |
| 35 | Ga0157374_10010319 | 3300013296 | Bacteria | 8034 |
| 36 | Ga0213875_10005751 | 3300021388 | Bacteria | 6605 |
| 37 | Ga0209784_100342 | 3300025224 | Bacteria | 22887 |
| 38 | Ga0209147_100240 | 3300025229 | Bacteria | 53218 |
| 39 | Ga0209147_102406 | 3300025229 | Bacteria | 4681 |
| 40 | Ga0209147_102629 | 3300025229 | Bacteria | 4227 |
| 41 | Ga0209130_1003479 | 3300025284 | Bacteria | 6645 |
| 42 | Ga0209130_1008482 | 3300025284 | Bacteria | 3031 |
| 43 | Ga0209676_1001491 | 3300025292 | Bacteria | 21530 |
| 44 | Ga0209676_1005226 | 3300025292 | Bacteria | 6878 |
| 45 | Ga0209676_1005978 | 3300025292 | Bacteria | 6152 |
| 46 | Ga0209025_1000734 | 3300025294 | Bacteria | 55490 |
| 47 | Ga0209025_1000834 | 3300025294 | Bacteria | 48958 |
| 48 | Ga0209025_1001524 | 3300025294 | Bacteria | 29647 |
| 49 | Ga0209025_1001528 | 3300025294 | Bacteria | 29602 |
| 50 | Ga0209025_1002585 | 3300025294 | Bacteria | 18739 |
| 51 | Ga0209025_1003646 | 3300025294 | Bacteria | 14286 |
| 52 | Ga0209025_1004071 | 3300025294 | Bacteria | 13057 |
| 53 | Ga0209025_1008066 | 3300025294 | Bacteria | 7665 |
| 54 | Ga0209025_1020612 | 3300025294 | Bacteria | 3595 |
| 55 | Ga0209025_1021598 | 3300025294 | Bacteria | 3460 |
| 56 | Ga0209025_1022150 | 3300025294 | Bacteria | 3384 |
| 57 | Ga0209025_1024964 | 3300025294 | Bacteria | 3063 |
| 58 | Ga0209025_1036951 | 3300025294 | Bacteria | 2176 |
| 59 | Ga0209025_1058077 | 3300025294 | Bacteria | 1473 |
| 60 | Ga0207696_1001319 | 3300025711 | Bacteria | 13715 |
| 61 | Ga0207696_1006800 | 3300025711 | Bacteria | 4559 |
| 62 | Ga0207696_1008596 | 3300025711 | Bacteria | 3882 |
| 63 | Ga0207696_1051969 | 3300025711 | Bacteria | 1169 |
| 64 | Ga0207655_1001869 | 3300025728 | Bacteria | 18138 |
| 65 | Ga0207655_1028642 | 3300025728 | Bacteria | 2624 |
| 66 | Ga0207655_1059975 | 3300025728 | Bacteria | 1477 |
| 67 | Ga0207713_1005364 | 3300025735 | Bacteria | 8048 |
| 68 | Ga0207705_10013269 | 3300025909 | Bacteria | 5948 |
| 69 | Ga0207671_10000051 | 3300025914 | Bacteria | 189023 |
| 70 | Ga0207663_10155406 | 3300025916 | Bacteria | 1609 |
| 71 | Ga0207657_10029513 | 3300025919 | Bacteria | 4990 |
| 72 | Ga0207659_10155340 | 3300025926 | Bacteria | 1791 |
| 73 | Ga0207687_10052159 | 3300025927 | Bacteria | 2853 |
| 74 | Ga0207664_10013357 | 3300025929 | Bacteria | 5891 |
| 75 | Ga0207709_10033984 | 3300025935 | Bacteria | 3000 |
| 76 | Ga0209973_1001445 | 3300027252 | Bacteria | 2077 |
| 77 | Ga0209371_1007980 | 3300027312 | Bacteria | 3589 |
| 78 | Ga0237817_10033 | 3300030083 | Bacteria | 48418 |
| 79 | Ga0237817_10334 | 3300030083 | Bacteria | 8970 |
| 80 | Ga0268256_1008270 | 3300030500 | Bacteria | 3590 |
| 81 | Ga0307408_100262561 | 3300031548 | Bacteria | 1430 |
| 82 | Ga0307409_100102924 | 3300031995 | Bacteria | 2374 |
| 83 | Ga0307416_100016381 | 3300032002 | Bacteria | 5151 |
| 84 | Ga0307416_100119196 | 3300032002 | Bacteria | 2347 |
| 85 | Ga0395900_0003090 | 3300037418 | Bacteria | 18082 |
| 86 | Ga0395898_0010809 | 3300037466 | Bacteria | 9537 |
| 87 | Ga0436364_0040027 | 3300037853 | Bacteria | 27527 |
| 88 | Ga0237819_00117 | 3300038705 | Bacteria | 29665 |
| 89 | Ga0237819_01300 | 3300038705 | Bacteria | 6716 |
| 90 | Ga0439436_0002088 | 3300041404 | Bacteria | 5962 |
| 91 | Ga0439439_0000461 | 3300041406 | Bacteria | 6928 |
| 92 | Ga0439433_0004064 | 3300041999 | Bacteria | 3144 |
| 93 | Ga0439449_0000011 | 3300042007 | Bacteria | 57369 |
| 94 | Ga0439462_0000878 | 3300042015 | Bacteria | 6315 |
| 95 | Ga0451577_0074168 | 3300042876 | Unclassified | 3035 |
| 96 | Ga0453683_0001850 | 3300044673 | Bacteria | 17368 |
| 97 | Ga0453684_0000026 | 3300044712 | Bacteria | 792958 |
| 98 | Ga0466959_0007304 | 3300045049 | Bacteria | 7745 |
| 99 | Ga0451576_0000050 | 3300045051 | Bacteria | 315118 |
| 100 | Ga0466967_0336999 | 3300045976 | Bacteria | 1458 |
| 101 | Ga0466967_0503914 | 3300045976 | Bacteria | 1188 |
| 102 | Ga0495605_0044268 | 3300046474 | Bacteria | 2202 |
| 103 | Ga0495654_0089427 | 3300046530 | Bacteria | 1431 |
| 104 | Ga0495661_0074588 | 3300046665 | Bacteria | 1974 |
| 105 | Ga0495661_0165868 | 3300046665 | Bacteria | 1182 |
| 106 | Ga0495660_0023077 | 3300046810 | Bacteria | 3551 |
| 107 | Ga0496100_0153638 | 3300048903 | Bacteria | 1644 |
| 108 | Ga0496102_0023359 | 3300048905 | Bacteria | 5491 |
| 109 | Ga0496103_0024014 | 3300048906 | Bacteria | 3678 |
| 110 | Ga0496110_0000765 | 3300048913 | Bacteria | 22271 |
| 111 | Ga0496111_0131153 | 3300048914 | Bacteria | 1854 |
| 112 | Ga0496112_0577735 | 3300048915 | Bacteria | 1057 |
| 113 | Ga0496115_0064412 | 3300048918 | Bacteria | 2959 |
| 114 | Ga0496116_0005418 | 3300048919 | Bacteria | 11859 |
| 115 | Ga0496119_0077747 | 3300048922 | Bacteria | 1921 |
| 116 | Ga0496120_0073305 | 3300048923 | Bacteria | 1874 |
| 117 | Ga0496122_0018451 | 3300048925 | Bacteria | 6443 |
| 118 | Ga0496122_0022091 | 3300048925 | Bacteria | 5668 |
| 119 | Ga0496124_0000211 | 3300048927 | Bacteria | 113824 |
| 120 | Ga0496125_0005546 | 3300048928 | Bacteria | 13961 |
| 121 | Ga0501306_003837 | 3300049127 | Bacteria | 1646 |
| 122 | Ga0501343_000942 | 3300049132 | Bacteria | 1878 |
| 123 | Ga0501305_004208 | 3300049161 | Bacteria | 1679 |
| 124 | Ga0501305_007463 | 3300049161 | Bacteria | 1390 |
| 125 | Ga0501312_000143 | 3300049528 | Bacteria | 4528 |
| 126 | Ga0501313_001894 | 3300049529 | Bacteria | 1912 |
| 127 | Ga0501317_001374 | 3300049533 | Bacteria | 2090 |
| 128 | Ga0501321_000820 | 3300049537 | Bacteria | 2224 |
| 129 | Ga0501335_000929 | 3300049551 | Bacteria | 2102 |
| 130 | Ga0501075_0261940 | 3300049591 | Bacteria | 1318 |
| 131 | Ga0501217_010586 | 3300049661 | Bacteria | 2022 |
| 132 | Ga0501081_0121987 | 3300049743 | Bacteria | 1857 |
| 133 | Ga0501035_0000330 | 3300049822 | Bacteria | 55037 |
| 134 | Ga0501212_014117 | 3300049851 | Bacteria | 1179 |
| 135 | Ga0530510_0077553 | 3300061734 | Bacteria | 2415 |
| 136 | 2511181061 | 2510917027 | Bacteria | 5287437 |
| 137 | 2511697949 | 2511231119 | Bacteria | 4019861 |
| 138 | 2512639413 | 2512564013 | Bacteria | 6286191 |
| 139 | 2540605174 | 2540341094 | Bacteria | 4061186 |
| 140 | 2545559797 | 2545555800 | Bacteria | 4222588 |
| 141 | 2553393207 | 2551306519 | Bacteria | 5465154 |
| 142 | 2555470987 | 2554235283 | Bacteria | 3683090 |
| 143 | 2556066094 | 2554235469 | Bacteria | 3590176 |
| 144 | 2578930754 | 2576861599 | Bacteria | 4217202 |
| 145 | 2595092148 | 2593339131 | Bacteria | 5116855 |
| 146 | 2595320833 | 2593339198 | Bacteria | 7267884 |
| 147 | 2631985890 | 2630968484 | Bacteria | 3876276 |
| 148 | 2644705841 | 2643221729 | Bacteria | 6621700 |
| 149 | 2644713291 | 2643221730 | Bacteria | 6523787 |
| 150 | 2644741696 | 2643221735 | Bacteria | 3676263 |
| 151 | 2651529593 | 2648501850 | Bacteria | 3975476 |
| 152 | 2672333535 | 2671180330 | Bacteria | 5521719 |
| 153 | 2674421220 | 2671180844 | Bacteria | 4164150 |
| 154 | 2685153521 | 2684622632 | Bacteria | 5380049 |
| 155 | 2686995272 | 2684623153 | Bacteria | 3878815 |
| 156 | 2687496521 | 2687453109 | Bacteria | 3860091 |
| 157 | 2695629865 | 2695420354 | Bacteria | 3922431 |
| 158 | 2698319671 | 2695420987 | Bacteria | 6152737 |
| 159 | 2705991970 | 2703719227 | Bacteria | 5631989 |
| 160 | 2712198684 | 2711768088 | Bacteria | 3195027 |
| 161 | 2717914449 | 2716884898 | Bacteria | 3928789 |
| 162 | 2721503395 | 2718218445 | Bacteria | 5113413 |
| 163 | 2738817542 | 2738541295 | Bacteria | 5730091 |
| 164 | 2738840662 | 2738541299 | Bacteria | 4020721 |
| 165 | 2739160279 | 2738541358 | Bacteria | 5932299 |
| 166 | 2739212798 | 2738543006 | Bacteria | 5904091 |
| 167 | 2739234736 | 2738543010 | Bacteria | 5583595 |
| 168 | 2757569028 | 2757320391 | Bacteria | 4746095 |
| 169 | 2777762453 | 2775507177 | Bacteria | 4384303 |
| 170 | 2777838560 | 2775507192 | Bacteria | 4622234 |
| 171 | 2791211425 | 2788500588 | Bacteria | 4584915 |
| 172 | 2793182005 | 2791355222 | Bacteria | 5898266 |
| 173 | 2809057106 | 2808606399 | Bacteria | 4021018 |
| 174 | 2812314409 | 2811994870 | Bacteria | 3776934 |
| 175 | 2816866479 | 2816332186 | Bacteria | 5331395 |
| 176 | 2817478137 | 2816332295 | Bacteria | 4352468 |
| 177 | 2819585076 | 2818991443 | Bacteria | 6598732 |
| 178 | 2819629543 | 2818991451 | Bacteria | 4697364 |
| 179 | 2819726166 | 2818991468 | Bacteria | 3723169 |
| 180 | 2823526362 | 2823526263 | Bacteria | 3765752 |
| 181 | 2831907826 | 2831905167 | Bacteria | 3319172 |
| 182 | 2842688440 | 2842682962 | Bacteria | 5589973 |
| 183 | 2849145071 | 2849139964 | Bacteria | 5613304 |
| 184 | 2852677332 | 2852673933 | Bacteria | 3347676 |
| 185 | 2857477541 | 2857472729 | Bacteria | 6568124 |
| 186 | 2857586581 | 2857581216 | Bacteria | 5522813 |
| 187 | 2857609019 | 2857604169 | Bacteria | 5111450 |
| 188 | 2857613560 | 2857609550 | Bacteria | 3753890 |
| 189 | 2860837526 | 2860837431 | Bacteria | 4202080 |
| 190 | 2865002683 | 2864997549 | Bacteria | 5139696 |
| 191 | 2877768745 | 2877768649 | Bacteria | 3957164 |
| 192 | 2880169688 | 2880169592 | Bacteria | 3900066 |
| 193 | 2881647400 | 2881644220 | Bacteria | 5302661 |
| 194 | 2889052451 | 2889049205 | Bacteria | 7524325 |
| 195 | 2889298995 | 2889295896 | Bacteria | 4704906 |
| 196 | 2897109715 | 2897109615 | Bacteria | 4009619 |
| 197 | 2898908088 | 2898907183 | Bacteria | 4067722 |
| 198 | 2904564492 | 2904560550 | Bacteria | 4029838 |
| 199 | 2904611446 | 2904606771 | Bacteria | 4684500 |
| 200 | 2908669238 | 2908665501 | Bacteria | 3678115 |
| 201 | 2915598653 | 2915597211 | Bacteria | 6475886 |
| 202 | 2915610208 | 2915606848 | Bacteria | 6032732 |
| 203 | 2919096997 | 2919093281 | Bacteria | 3660974 |
| 204 | 2919419104 | 2919414237 | Bacteria | 5429133 |
| 205 | 2919730668 | 2919726948 | Bacteria | 3696050 |
| 206 | 2929183799 | 2929183550 | Bacteria | 6377511 |
| 207 | 2929233209 | 2929233124 | Bacteria | 5948380 |
| 208 | 2936343284 | 2936340661 | Bacteria | 5139038 |
| 209 | 2936363637 | 2936361878 | Bacteria | 5632809 |
| 210 | 2938917387 | 2938917290 | Bacteria | 5914775 |
| 211 | 2939596725 | 2939593269 | Bacteria | 4798695 |
| 212 | 2947426675 | 2947426588 | Bacteria | 5357194 |
| 213 | 2954776133 | 2954773129 | Bacteria | 3741715 |
| 214 | 2956901113 | 2956897341 | Bacteria | 5447711 |
| 215 | 2962290736 | 2962290636 | Bacteria | 4072939 |
| 216 | 2964376572 | 2964375228 | Bacteria | 4909004 |
| 217 | 2965761176 | 2965761152 | Bacteria | 5806513 |
| 218 | 2969136943 | 2969136845 | Bacteria | 3923176 |
| 219 | 2969141109 | 2969141011 | Bacteria | 4118468 |
| 220 | 2969766353 | 2969765954 | Bacteria | 4216713 |
| 221 | 2969770437 | 2969770375 | Bacteria | 4271280 |
| 222 | 2971893473 | 2971893375 | Bacteria | 3929648 |
| 223 | 2977254752 | 2977254563 | Bacteria | 4828420 |
| 224 | 2979089232 | 2979083700 | Bacteria | 5894929 |
| 225 | 2980129795 | 2980125574 | Bacteria | 5567337 |
| 226 | 2980492687 | 2980492589 | Bacteria | 4072961 |
| 227 | 2981289624 | 2981284811 | Bacteria | 4641497 |
| 228 | 2981294569 | 2981289755 | Bacteria | 4641509 |
| 229 | 2981985163 | 2981980479 | Bacteria | 4641628 |
| 230 | 2981990097 | 2981985349 | Bacteria | 4641497 |
| 231 | 2990275752 | 2990275345 | Bacteria | 4887158 |
| 232 | 3001272073 | 3001267043 | Bacteria | 4823521 |
| 233 | 3001275897 | 3001272096 | Bacteria | 4729684 |
| 234 | 3001894081 | 3001892409 | Bacteria | 6328293 |
| 235 | 3006858461 | 3006858327 | Bacteria | 4317835 |
| 236 | 3006978398 | 3006973921 | Bacteria | 4423788 |
| 237 | 3006980069 | 3006978542 | Bacteria | 5328100 |
| 238 | 3006988448 | 3006984091 | Bacteria | 4207523 |
| 239 | 3006993254 | 3006988479 | Bacteria | 4767936 |
| 240 | 8022621174 | 8022621104 | Bacteria | 5241040 |
| 241 | 8022631679 | 8022630665 | Bacteria | 3886130 |
| 242 | 8022656347 | 8022653035 | Bacteria | 4035078 |
| 243 | 8022795990 | 8022792930 | Bacteria | 5693794 |
| 244 | 8022952072 | 8022948649 | Bacteria | 5366783 |
| 245 | 8023440690 | 8023438354 | Bacteria | 5779374 |
| 246 | 8023447707 | 8023444577 | Bacteria | 5661597 |
| 247 | 8051956615 | 8051952484 | Bacteria | 3926774 |
| 248 | 8052175092 | 8052174270 | Bacteria | 3881265 |
| 249 | 8054282959 | 8054280661 | Bacteria | 4232245 |
| 250 | 8055531901 | 8055531788 | Bacteria | 5249694 |
| 251 | 8057582742 | 8057582654 | Bacteria | 5218944 |
| 252 | 8057632225 | 8057632132 | Bacteria | 4726859 |
| 253 | Ga0070660_100004911 | |||
| 254 | JGI25159J45721_1005495 | |||
| 255 | JGI25151J46595_10000294 | |||
| 256 | JGI25151J46595_10004784 | |||
| 257 | JGI25151J46595_10007909 | |||
| 258 | JGI25151J46595_10009605 | |||
| 259 | JGI25151J46595_10044580 | |||
| 260 | JGI25151J46595_10052048 | |||
| 261 | JGI25151J46595_10058766 | |||
| 262 | Ga0006562J51391_1000026 | |||
| 263 | Ga0006562J51391_1028952 | |||
| 264 | Ga0055538_1000645 | |||
| 265 | Ga0055532_1000183 | |||
| 266 | Ga0055536_1017141 | |||
| 267 | Ga0070658_10016542 | |||
| 268 | Ga0070660_100237771 | |||
| 269 | Ga0070714_100064463 | |||
| 270 | Ga0070711_100140806 | |||
| 271 | Ga0105244_10014498 | |||
| 272 | Ga0105244_10015912 | |||
| 273 | Ga0105244_10019501 | |||
| 274 | Ga0105244_10065324 | |||
| 275 | Ga0105244_10099153 | |||
| 276 | Ga0105250_10007983 | |||
| 277 | Ga0105250_10013710 | |||
| 278 | Ga0105250_10014594 | |||
| 279 | Ga0105240_10231933 | |||
| 280 | Ga0105245_10090357 | |||
| 281 | Ga0105241_10089414 | |||
| 282 | Ga0105237_10000024 | |||
| 283 | Ga0105238_10035708 | |||
| 284 | Ga0105239_10012422 | |||
| 285 | Ga0105246_10006639 | |||
| 286 | Ga0157371_10100360 | |||
| 287 | Ga0157374_10010319 | |||
| 288 | Ga0213875_10005751 | |||
| 289 | Ga0209784_100342 | |||
| 290 | Ga0209147_100240 | |||
| 291 | Ga0209147_102406 | |||
| 292 | Ga0209147_102629 | |||
| 293 | Ga0209130_1003479 | |||
| 294 | Ga0209130_1008482 | |||
| 295 | Ga0209676_1001491 | |||
| 296 | Ga0209676_1005226 | |||
| 297 | Ga0209676_1005978 | |||
| 298 | Ga0209025_1000734 | |||
| 299 | Ga0209025_1000834 | |||
| 300 | Ga0209025_1001524 | |||
| 301 | Ga0209025_1001528 | |||
| 302 | Ga0209025_1002585 | |||
| 303 | Ga0209025_1003646 | |||
| 304 | Ga0209025_1004071 | |||
| 305 | Ga0209025_1008066 | |||
| 306 | Ga0209025_1020612 | |||
| 307 | Ga0209025_1021598 | |||
| 308 | Ga0209025_1022150 | |||
| 309 | Ga0209025_1024964 | |||
| 310 | Ga0209025_1036951 | |||
| 311 | Ga0209025_1058077 | |||
| 312 | Ga0207696_1001319 | |||
| 313 | Ga0207696_1006800 | |||
| 314 | Ga0207696_1008596 | |||
| 315 | Ga0207696_1051969 | |||
| 316 | Ga0207655_1001869 | |||
| 317 | Ga0207655_1028642 | |||
| 318 | Ga0207655_1059975 | |||
| 319 | Ga0207713_1005364 | |||
| 320 | Ga0207705_10013269 | |||
| 321 | Ga0207671_10000051 | |||
| 322 | Ga0207663_10155406 | |||
| 323 | Ga0207657_10029513 | |||
| 324 | Ga0207659_10155340 | |||
| 325 | Ga0207687_10052159 | |||
| 326 | Ga0207664_10013357 | |||
| 327 | Ga0207709_10033984 | |||
| 328 | Ga0209973_1001445 | |||
| 329 | Ga0209371_1007980 | |||
| 330 | Ga0237817_10033 | |||
| 331 | Ga0237817_10334 | |||
| 332 | Ga0268256_1008270 | |||
| 333 | Ga0307408_100262561 | |||
| 334 | Ga0307409_100102924 | |||
| 335 | Ga0307416_100016381 | |||
| 336 | Ga0307416_100119196 | |||
| 337 | Ga0395900_0003090 | |||
| 338 | Ga0395898_0010809 | |||
| 339 | Ga0436364_0040027 | |||
| 340 | Ga0237819_00117 | |||
| 341 | Ga0237819_01300 | |||
| 342 | Ga0439436_0002088 | |||
| 343 | Ga0439439_0000461 | |||
| 344 | Ga0439433_0004064 | |||
| 345 | Ga0439449_0000011 | |||
| 346 | Ga0439462_0000878 | |||
| 347 | Ga0451577_0074168 | |||
| 348 | Ga0453683_0001850 | |||
| 349 | Ga0453684_0000026 | |||
| 350 | Ga0466959_0007304 | |||
| 351 | Ga0451576_0000050 | |||
| 352 | Ga0466967_0336999 | |||
| 353 | Ga0466967_0503914 | |||
| 354 | Ga0495605_0044268 | |||
| 355 | Ga0495654_0089427 | |||
| 356 | Ga0495661_0074588 | |||
| 357 | Ga0495661_0165868 | |||
| 358 | Ga0495660_0023077 | |||
| 359 | Ga0496100_0153638 | |||
| 360 | Ga0496102_0023359 | |||
| 361 | Ga0496103_0024014 | |||
| 362 | Ga0496110_0000765 | |||
| 363 | Ga0496111_0131153 | |||
| 364 | Ga0496112_0577735 | |||
| 365 | Ga0496115_0064412 | |||
| 366 | Ga0496116_0005418 | |||
| 367 | Ga0496119_0077747 | |||
| 368 | Ga0496120_0073305 | |||
| 369 | Ga0496122_0018451 | |||
| 370 | Ga0496122_0022091 | |||
| 371 | Ga0496124_0000211 | |||
| 372 | Ga0496125_0005546 | |||
| 373 | Ga0501306_003837 | |||
| 374 | Ga0501343_000942 | |||
| 375 | Ga0501305_004208 | |||
| 376 | Ga0501305_007463 | |||
| 377 | Ga0501312_000143 | |||
| 378 | Ga0501313_001894 | |||
| 379 | Ga0501317_001374 | |||
| 380 | Ga0501321_000820 | |||
| 381 | Ga0501335_000929 | |||
| 382 | Ga0501075_0261940 | |||
| 383 | Ga0501217_010586 | |||
| 384 | Ga0501081_0121987 | |||
| 385 | Ga0501035_0000330 | |||
| 386 | Ga0501212_014117 | |||
| 387 | Ga0530510_0077553 | |||
| 388 | 2511181061 | |||
| 389 | 2511697949 | |||
| 390 | 2512639413 | |||
| 391 | 2540605174 | |||
| 392 | 2545559797 | |||
| 393 | 2553393207 | |||
| 394 | 2555470987 | |||
| 395 | 2556066094 | |||
| 396 | 2578930754 | |||
| 397 | 2595092148 | |||
| 398 | 2595320833 | |||
| 399 | 2631985890 | |||
| 400 | 2644705841 | |||
| 401 | 2644713291 | |||
| 402 | 2644741696 | |||
| 403 | 2651529593 | |||
| 404 | 2672333535 | |||
| 405 | 2674421220 | |||
| 406 | 2685153521 | |||
| 407 | 2686995272 | |||
| 408 | 2687496521 | |||
| 409 | 2695629865 | |||
| 410 | 2698319671 | |||
| 411 | 2705991970 | |||
| 412 | 2712198684 | |||
| 413 | 2717914449 | |||
| 414 | 2721503395 | |||
| 415 | 2738817542 | |||
| 416 | 2738840662 | |||
| 417 | 2739160279 | |||
| 418 | 2739212798 | |||
| 419 | 2739234736 | |||
| 420 | 2757569028 | |||
| 421 | 2777762453 | |||
| 422 | 2777838560 | |||
| 423 | 2791211425 | |||
| 424 | 2793182005 | |||
| 425 | 2809057106 | |||
| 426 | 2812314409 | |||
| 427 | 2816866479 | |||
| 428 | 2817478137 | |||
| 429 | 2819585076 | |||
| 430 | 2819629543 | |||
| 431 | 2819726166 | |||
| 432 | 2823526362 | |||
| 433 | 2831907826 | |||
| 434 | 2842688440 | |||
| 435 | 2849145071 | |||
| 436 | 2852677332 | |||
| 437 | 2857477541 | |||
| 438 | 2857586581 | |||
| 439 | 2857609019 | |||
| 440 | 2857613560 | |||
| 441 | 2860837526 | |||
| 442 | 2865002683 | |||
| 443 | 2877768745 | |||
| 444 | 2880169688 | |||
| 445 | 2881647400 | |||
| 446 | 2889052451 | |||
| 447 | 2889298995 | |||
| 448 | 2897109715 | |||
| 449 | 2898908088 | |||
| 450 | 2904564492 | |||
| 451 | 2904611446 | |||
| 452 | 2908669238 | |||
| 453 | 2915598653 | |||
| 454 | 2915610208 | |||
| 455 | 2919096997 | |||
| 456 | 2919419104 | |||
| 457 | 2919730668 | |||
| 458 | 2929183799 | |||
| 459 | 2929233209 | |||
| 460 | 2936343284 | |||
| 461 | 2936363637 | |||
| 462 | 2938917387 | |||
| 463 | 2939596725 | |||
| 464 | 2947426675 | |||
| 465 | 2954776133 | |||
| 466 | 2956901113 | |||
| 467 | 2962290736 | |||
| 468 | 2964376572 | |||
| 469 | 2965761176 | |||
| 470 | 2969136943 | |||
| 471 | 2969141109 | |||
| 472 | 2969766353 | |||
| 473 | 2969770437 | |||
| 474 | 2971893473 | |||
| 475 | 2977254752 | |||
| 476 | 2979089232 | |||
| 477 | 2980129795 | |||
| 478 | 2980492687 | |||
| 479 | 2981289624 | |||
| 480 | 2981294569 | |||
| 481 | 2981985163 | |||
| 482 | 2981990097 | |||
| 483 | 2990275752 | |||
| 484 | 3001272073 | |||
| 485 | 3001275897 | |||
| 486 | 3001894081 | |||
| 487 | 3006858461 | |||
| 488 | 3006978398 | |||
| 489 | 3006980069 | |||
| 490 | 3006988448 | |||
| 491 | 3006993254 | |||
| 492 | 8022621174 | |||
| 493 | 8022631679 | |||
| 494 | 8022656347 | |||
| 495 | 8022795990 | |||
| 496 | 8022952072 | |||
| 497 | 8023440690 | |||
| 498 | 8023447707 | |||
| 499 | 8051956615 | |||
| 500 | 8052175092 | |||
| 501 | 8054282959 | |||
| 502 | 8055531901 | |||
| 503 | 8057582742 | |||
| 504 | 8057632225 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6ei9-assembly2.cif.gz_B | crystal structure of e. coli trna-dihydrouridine synthase b (dusb) | 0.955 | 2 | 320 |
| 1vhn-assembly1.cif.gz_A | crystal structure of a putative flavin oxidoreductase with flavin | 0.9514 | 11 | 322 |
| 1vhn-assembly1.cif.gz_A | crystal structure of a putative flavin oxidoreductase with flavin | 0.9454 | 11 | 322 |
| 6ei9-assembly2.cif.gz_B | crystal structure of e. coli trna-dihydrouridine synthase b (dusb) | 0.9308 | 2 | 320 |
| 3w9z-assembly1.cif.gz_A | crystal structure of dusc | 0.84 | 11 | 317 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P0ABT5_6_247_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9693 | 7 | 249 | 3.20.20.70 |
| af_P0ABT5_6_247_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9654 | 7 | 249 | 3.20.20.70 |
| af_P9WNS7_19_267_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9635 | 8 | 241 | 3.20.20.70 |
| af_Q9TYN2_201_445_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9575 | 11 | 241 | 3.20.20.70 |
| af_Q9VIS4_253_495_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9475 | 7 | 241 | 3.20.20.70 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A0N0Z3Z5-F1-model_v4 | deleted | 0.9979 | 41 | 253 |
|
| AF-S7UC72-F1-model_v4 | tRNA-dihydrouridine synthase | 0.9978 | 1 | 253 |
GO:0003723
GO:0017150 GO:0050660 |
| AF-A0A7X8C3H9-F1-model_v4 | tRNA dihydrouridine synthase DusB | 0.9943 | 1 | 183 |
GO:0003723
GO:0017150 GO:0050660 |
| AF-A0A7V7SBB5-F1-model_v4 | tRNA-dihydrouridine synthase (EC 1.3.1.-) | 0.9915 | 1 | 332 |
GO:0000049
GO:0017150 GO:0050660 |
| AF-A0A7C5H937-F1-model_v4 | tRNA dihydrouridine synthase DusB | 0.9915 | 2 | 210 |
GO:0003723
GO:0017150 GO:0050660 |