F362560

General Info

Members Datasets Scaffolds Average Seq Length
251 145 251 191

Family's Representative Sequence

Representative Sequence 3300037068|Ga0373925_0287522|Ga0373925_0287522_194_868
Length 224
Sequence LRSESSFISSESGFLAQRIRFALTTVPQTSIIPSMKQWISEYIRGQKAAHDSIPLDAMVQLIEKLQTAVKEDRQIFVFGNGGSAANSSHFATDLGKGASDKVGKRFRVLSLNDNVSWMTALANDYSYEDAFIGQLQNYGKPGDVVLALSVSGNSPNCVKALEWAKKNGLKTVALVGAKRGRMAQVAEQVIVINDTHYGRVEDAQMGICHMLCYAFMENPKWGQV

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
83 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
84 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
85 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
86 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
87 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
90 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
91 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
92 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
93 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
94 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
95 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
96 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
97 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
99 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
100 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
111 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
112 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
113 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
114 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
115 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
116 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
117 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
118 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
119 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
120 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
121 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
122 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
123 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
124 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
125 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
126 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
127 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
128 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
131 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
132 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
135 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
136 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
137 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
138 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
143 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
144 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
145 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.6
Metatranscriptomes 0.4
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.39
Nodule 0
Rhizoplane 0
Rhizosphere 96.02
Stem 0
Stem Tuber 0
Unclassified 1.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10004645 3300003203 Bacteria 6393
2 rootL2_10284241 3300003322 Bacteria 1253
3 rootH1_10320974 3300003323 Bacteria 3105
4 Ga0058863_10599759 3300004799 Bacteria 729
5 Ga0070658_10231657 3300005327 Unclassified 1564
6 Ga0070690_100142970 3300005330 Viruses 1625
7 Ga0070689_100001503 3300005340 Bacteria 14859
8 Ga0070689_100033082 3300005340 Bacteria 3937
9 Ga0070689_100128081 3300005340 Bacteria 2033
10 Ga0070691_10260172 3300005341 Unclassified 934
11 Ga0070692_10073846 3300005345 Unclassified 1823
12 Ga0070673_100985332 3300005364 Bacteria 784
13 Ga0070688_100198482 3300005365 Bacteria 1402
14 Ga0070688_100250808 3300005365 Bacteria 1260
15 Ga0070709_10096911 3300005434 Bacteria 1957
16 Ga0070714_100007987 3300005435 Bacteria 8245
17 Ga0070711_100199496 3300005439 Archaea 1543
18 Ga0070681_10101482 3300005458 Unclassified 2823
19 Ga0070681_11139061 3300005458 Unclassified 701
20 Ga0070685_10046922 3300005466 Bacteria 2482
21 Ga0070685_10099547 3300005466 Bacteria 1773
22 Ga0070685_10177584 3300005466 Bacteria 1368
23 Ga0070706_100732469 3300005467 Unclassified 916
24 Ga0070698_100551192 3300005471 Unclassified 1092
25 Ga0070679_100099719 3300005530 Bacteria 2891
26 Ga0070679_100771650 3300005530 Bacteria 904
27 Ga0070704_101084209 3300005549 Bacteria 727
28 Ga0068855_100044082 3300005563 Bacteria 5281
29 Ga0068855_100880709 3300005563 Unclassified 947
30 Ga0068855_100893356 3300005563 Bacteria 939
31 Ga0068857_100003102 3300005577 Bacteria 13750
32 Ga0068857_100011272 3300005577 Bacteria 7775
33 Ga0068856_100222782 3300005614 Bacteria 1901
34 Ga0068856_100326630 3300005614 Unclassified 1552
35 Ga0070702_100029393 3300005615 Unclassified 2988
36 Ga0068852_100137284 3300005616 Unclassified 2259
37 Ga0068859_100703251 3300005617 Bacteria 1101
38 Ga0068859_100714586 3300005617 Bacteria 1092
39 Ga0068863_100045568 3300005841 Bacteria 4162
40 Ga0068863_100141907 3300005841 Bacteria 2296
41 Ga0068863_100411966 3300005841 Bacteria 1323
42 Ga0068863_100436237 3300005841 Bacteria 1284
43 Ga0068863_100801256 3300005841 Bacteria 940
44 Ga0068863_101074146 3300005841 Unclassified 809
45 Ga0068858_100235754 3300005842 Bacteria 1735
46 Ga0068858_100394375 3300005842 Bacteria 1329
47 Ga0068858_101190015 3300005842 Bacteria 749
48 Ga0068862_100500410 3300005844 Bacteria 1153
49 Ga0081455_10181189 3300005937 Bacteria 1594
50 Ga0081455_10464119 3300005937 Unclassified 861
51 Ga0081539_10004597 3300005985 Bacteria 15067
52 Ga0070717_10935804 3300006028 Unclassified 789
53 Ga0075362_10101205 3300006177 Unclassified 1347
54 Ga0075366_10040693 3300006195 Bacteria 2749
55 Ga0097621_100787777 3300006237 Unclassified 880
56 Ga0097621_101249423 3300006237 Unclassified 700
57 Ga0068871_100698188 3300006358 Unclassified 929
58 Ga0075431_100051858 3300006847 Bacteria 4230
59 Ga0075431_100091425 3300006847 Bacteria 3141
60 Ga0068865_100746255 3300006881 Unclassified 840
61 Ga0075436_100507439 3300006914 Unclassified 883
62 Ga0097620_100703180 3300006931 Bacteria 1101
63 Ga0097620_100714592 3300006931 Bacteria 1092
64 Ga0105240_10000133 3300009093 Bacteria 152160
65 Ga0105240_10002761 3300009093 Bacteria 27730
66 Ga0105240_10054435 3300009093 Bacteria 5014
67 Ga0105240_10077212 3300009093 Bacteria 4104
68 Ga0105240_10111188 3300009093 Unclassified 3315
69 Ga0105240_10877324 3300009093 Unclassified 967
70 Ga0111539_10025203 3300009094 Bacteria 7291
71 Ga0111539_10616255 3300009094 Unclassified 1264
72 Ga0105245_10176227 3300009098 Unclassified 2039
73 Ga0105245_10587239 3300009098 Unclassified 1139
74 Ga0114129_11936036 3300009147 Unclassified 714
75 Ga0105241_10948149 3300009174 Unclassified 802
76 Ga0105242_10064594 3300009176 Bacteria 3018
77 Ga0105242_10104694 3300009176 Bacteria 2402
78 Ga0105242_10392648 3300009176 Bacteria 1293
79 Ga0105242_10807624 3300009176 Bacteria 929
80 Ga0105238_10013504 3300009551 Bacteria 8246
81 Ga0105238_10109218 3300009551 Bacteria 2747
82 Ga0105249_10870304 3300009553 Unclassified 967
83 Ga0105239_10024548 3300010375 Bacteria 6641
84 Ga0157374_10249945 3300013296 Unclassified 1745
85 Ga0157374_10347509 3300013296 Bacteria 1473
86 Ga0157374_10497882 3300013296 Bacteria 1223
87 Ga0157378_10226709 3300013297 Bacteria 1779
88 Ga0157378_10423663 3300013297 Bacteria 1316
89 Ga0157378_11336761 3300013297 Bacteria 758
90 Ga0163162_10313285 3300013306 Bacteria 1702
91 Ga0157372_10201862 3300013307 Bacteria 2303
92 Ga0157375_10000037 3300013308 Bacteria 176523
93 Ga0163163_10032082 3300014325 Bacteria 5074
94 Ga0163163_10150792 3300014325 Bacteria 2369
95 Ga0157376_10275173 3300014969 Unclassified 1583
96 Ga0207699_10208447 3300025906 Bacteria 1328
97 Ga0207684_10628690 3300025910 Unclassified 916
98 Ga0207707_10032809 3300025912 Bacteria 4545
99 Ga0207707_10039966 3300025912 Bacteria 4098
100 Ga0207695_10000222 3300025913 Bacteria 152313
101 Ga0207695_10002620 3300025913 Bacteria 26346
102 Ga0207695_10654955 3300025913 Unclassified 931
103 Ga0207695_10794325 3300025913 Bacteria 826
104 Ga0207663_10749857 3300025916 Unclassified 775
105 Ga0207662_10108691 3300025918 Bacteria 1727
106 Ga0207657_10460981 3300025919 Unclassified 997
107 Ga0207652_10290087 3300025921 Unclassified 1476
108 Ga0207652_10867600 3300025921 Bacteria 799
109 Ga0207694_10042667 3300025924 Bacteria 3499
110 Ga0207650_10915420 3300025925 Bacteria 745
111 Ga0207664_10005769 3300025929 Bacteria 8470
112 Ga0207686_10153286 3300025934 Bacteria 1607
113 Ga0207686_10702351 3300025934 Bacteria 804
114 Ga0207670_10004192 3300025936 Bacteria 7732
115 Ga0207670_10029608 3300025936 Bacteria 3490
116 Ga0207670_10160929 3300025936 Bacteria 1675
117 Ga0207670_10227436 3300025936 Unclassified 1431
118 Ga0207711_10660038 3300025941 Bacteria 976
119 Ga0207661_10359965 3300025944 Bacteria 1314
120 Ga0207667_10009421 3300025949 Bacteria 11502
121 Ga0207667_10983791 3300025949 Unclassified 832
122 Ga0207667_10995437 3300025949 Bacteria 826
123 Ga0207639_10452463 3300026041 Unclassified 1166
124 Ga0207702_10174829 3300026078 Bacteria 1972
125 Ga0207702_10235494 3300026078 Unclassified 1713
126 Ga0207702_10342338 3300026078 Bacteria 1429
127 Ga0207641_10106638 3300026088 Bacteria 2477
128 Ga0207641_10170311 3300026088 Bacteria 1987
129 Ga0207641_10540819 3300026088 Bacteria 1135
130 Ga0207674_10006455 3300026116 Bacteria 13787
131 Ga0207674_10215013 3300026116 Bacteria 1871
132 Ga0207674_10353572 3300026116 Bacteria 1420
133 Ga0207683_10264441 3300026121 Bacteria 1571
134 Ga0207698_11089468 3300026142 Bacteria 811
135 Ga0207428_10075212 3300027907 Unclassified 2647
136 Ga0268265_10424777 3300028380 Bacteria 1235
137 Ga0268264_10377929 3300028381 Bacteria 1356
138 Ga0265337_1003526 3300028556 Bacteria 6754
139 Ga0265319_1017997 3300028563 Bacteria 2675
140 Ga0265334_10005545 3300028573 Bacteria 5512
141 Ga0265334_10064453 3300028573 Bacteria 1376
142 Ga0265334_10125864 3300028573 Bacteria 914
143 Ga0265318_10057674 3300028577 Bacteria 1451
144 Ga0265322_10041157 3300028654 Unclassified 1315
145 Ga0265336_10002734 3300028666 Bacteria 7133
146 Ga0265338_10002849 3300028800 Bacteria 25270
147 Ga0265338_10061341 3300028800 Bacteria 3296
148 Ga0265338_10073066 3300028800 Bacteria 2925
149 Ga0265338_10114365 3300028800 Bacteria 2166
150 Ga0265338_10175385 3300028800 Bacteria 1639
151 Ga0265338_10324567 3300028800 Unclassified 1113
152 Ga0307511_10069311 3300030521 Bacteria 2594
153 Ga0265320_10202790 3300031240 Unclassified 885
154 Ga0265327_10005833 3300031251 Bacteria 10098
155 Ga0265316_10145911 3300031344 Bacteria 1775
156 Ga0265316_10744002 3300031344 Bacteria 689
157 Ga0307509_10027310 3300031507 Bacteria 6351
158 Ga0265342_10047741 3300031712 Bacteria 2569
159 Ga0373926_0008310 3300035083 Unclassified 3454
160 Ga0373944_0083135 3300035089 Unclassified 1060
161 Ga0373936_0248960 3300035113 Unclassified 793
162 Ga0373936_0328156 3300035113 Unclassified 694
163 Ga0373935_0013405 3300035692 Unclassified 4945
164 Ga0373927_0478337 3300035695 Bacteria 823
165 Ga0373947_0010147 3300035725 Bacteria 5408
166 Ga0373947_0117699 3300035725 Bacteria 1686
167 Ga0373937_0486846 3300036401 Bacteria 1172
168 Ga0316582_0169698 3300036647 Bacteria 1481
169 Ga0373925_0001271 3300037068 Bacteria 22275
170 Ga0373925_0243023 3300037068 Unclassified 1442
171 Ga0373925_0287522 3300037068 Bacteria 1325
172 Ga0395905_0338886 3300037471 Unclassified 1395
173 Ga0451577_0004934 3300042876 Bacteria 13881
174 Ga0451577_0007028 3300042876 Bacteria 11101
175 Ga0451577_0902024 3300042876 Bacteria 796
176 Ga0453684_0020889 3300044712 Bacteria 9826
177 Ga0453684_0149907 3300044712 Bacteria 2773
178 Ga0453684_1132535 3300044712 Bacteria 825
179 Ga0453684_1146963 3300044712 Bacteria 819
180 Ga0451576_0024075 3300045051 Bacteria 6580
181 Ga0451576_0034540 3300045051 Bacteria 5369
182 Ga0451576_0091388 3300045051 Bacteria 3166
183 Ga0451576_0134699 3300045051 Bacteria 2576
184 Ga0451576_0558149 3300045051 Bacteria 1203
185 Ga0451576_1127096 3300045051 Bacteria 820
186 Ga0451576_1769279 3300045051 Bacteria 639
187 Ga0495592_0000008 3300046454 Bacteria 175382
188 Ga0495592_0047097 3300046454 Bacteria 3212
189 Ga0495592_0512373 3300046454 Bacteria 743
190 Ga0495629_0048268 3300046459 Unclassified 2985
191 Ga0495629_0424274 3300046459 Unclassified 902
192 Ga0495641_0014459 3300046461 Unclassified 4267
193 Ga0495641_0077478 3300046461 Unclassified 1490
194 Ga0495582_0125772 3300046473 Unclassified 1446
195 Ga0495582_0131044 3300046473 Unclassified 1417
196 Ga0495662_0007038 3300046476 Bacteria 5586
197 Ga0495662_0021840 3300046476 Unclassified 3093
198 Ga0495664_0004703 3300046477 Bacteria 7468
199 Ga0495618_0002930 3300046514 Bacteria 10809
200 Ga0495618_0210427 3300046514 Unclassified 1229
201 Ga0495628_0000046 3300046516 Bacteria 97902
202 Ga0495628_0413245 3300046516 Bacteria 984
203 Ga0495630_0000090 3300046517 Bacteria 71226
204 Ga0495630_0003999 3300046517 Bacteria 10316
205 Ga0495630_0026252 3300046517 Unclassified 4311
206 Ga0495666_0001142 3300046526 Bacteria 12730
207 Ga0495666_0009355 3300046526 Bacteria 4903
208 Ga0495666_0035540 3300046526 Unclassified 2429
209 Ga0495665_0277385 3300046531 Bacteria 860
210 Ga0495640_0139686 3300046533 Unclassified 1562
211 Ga0495640_0209977 3300046533 Unclassified 1231
212 Ga0495586_0000059 3300046535 Bacteria 66207
213 Ga0495586_0001308 3300046535 Bacteria 13867
214 Ga0495586_0004099 3300046535 Bacteria 7808
215 Ga0495586_0400707 3300046535 Bacteria 790
216 Ga0495645_0073346 3300046543 Unclassified 2466
217 Ga0495645_0283077 3300046543 Bacteria 1089
218 Ga0495657_0022845 3300046675 Bacteria 4475
219 Ga0495599_0047300 3300046678 Bacteria 2696
220 Ga0495658_0569792 3300046683 Bacteria 725
221 Ga0495669_0464333 3300046684 Unclassified 615
222 Ga0495613_0021205 3300046689 Bacteria 4846
223 Ga0495613_0099361 3300046689 Unclassified 2102
224 Ga0495613_0138900 3300046689 Bacteria 1737
225 Ga0495613_0177028 3300046689 Unclassified 1512
226 Ga0495613_0363434 3300046689 Bacteria 992
227 Ga0495624_0059026 3300046690 Unclassified 2408
228 Ga0495581_0199176 3300047315 Bacteria 1171
229 Ga0495581_0208687 3300047315 Unclassified 1142
230 Ga0495674_0000212 3300047319 Bacteria 48127
231 Ga0495674_0010054 3300047319 Bacteria 8968
232 Ga0495676_0033384 3300047321 Bacteria 4335
233 Ga0495676_0167974 3300047321 Unclassified 1546
234 Ga0495680_0268560 3300047322 Bacteria 1205
235 Ga0495675_0063930 3300047444 Bacteria 2328
236 Ga0501033_0116505 3300049570 Unclassified 1941
237 Ga0501266_046284 3300049763 Unclassified 661
238 Ga0501044_0102071 3300049823 Bacteria 2885
239 Ga0501044_1118751 3300049823 Unclassified 657
240 nmdc:mga03683_78602_c1 3300050489 Bacteria 1421
241 nmdc:mga0k408_557112_c1 3300050493 Unclassified 677
242 nmdc:mga09592_710495_c1 3300050508 Unclassified 855
243 nmdc:mga06r32_232912_c1 3300050510 Bacteria 1830
244 nmdc:mga06r32_44459_c1 3300050510 Bacteria 4229
245 nmdc:mga08y16_156204_c1 3300050511 Unclassified 2370
246 nmdc:mga08y16_42229_c1 3300050511 Bacteria 4776
247 nmdc:mga0n895_942050_c1 3300050512 Unclassified 847
248 nmdc:mga08x19_116928_c1 3300050514 Bacteria 1783
249 Ga0495601_0111202 3300053077 Bacteria 1774
250 Ga0500594_0044965 3300053118 Bacteria 1223
251 Ga0500636_0230794 3300053177 Bacteria 958

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013297 Ga0157378_10226709 Ga0157378_102267092 179
2 3300025906 Ga0207699_10208447 Ga0207699_102084472 182
3 3300045051 Ga0451576_0091388 Ga0451576_0091388_1443_2021 185
4 3300006847 Ga0075431_100091425 Ga0075431_1000914252 186
5 3300009147 Ga0114129_11936036 Ga0114129_119360361 186
6 3300025916 Ga0207663_10749857 Ga0207663_107498571 186
7 3300005467 Ga0070706_100732469 Ga0070706_1007324692 188
8 3300005530 Ga0070679_100771650 Ga0070679_1007716501 188
9 3300005844 Ga0068862_100500410 Ga0068862_1005004102 188
10 3300006914 Ga0075436_100507439 Ga0075436_1005074391 188
11 3300025910 Ga0207684_10628690 Ga0207684_106286902 188
12 3300025913 Ga0207695_10002620 Ga0207695_1000262011 188
13 3300025921 Ga0207652_10867600 Ga0207652_108676002 188
14 3300028380 Ga0268265_10424777 Ga0268265_104247772 188
15 3300042876 Ga0451577_0004934 Ga0451577_0004934_10418_10984 188
16 3300050514 nmdc:mga08x19_116928_c1 nmdc:mga08x19_116928_c1_243_809 188
17 3300003322 rootL2_10284241 rootL2_102842411 189
18 3300005340 Ga0070689_100033082 Ga0070689_1000330822 189
19 3300005341 Ga0070691_10260172 Ga0070691_102601721 189
20 3300005345 Ga0070692_10073846 Ga0070692_100738462 189
21 3300005364 Ga0070673_100985332 Ga0070673_1009853321 189
22 3300005365 Ga0070688_100198482 Ga0070688_1001984822 189
23 3300005435 Ga0070714_100007987 Ga0070714_1000079873 189
24 3300005458 Ga0070681_10101482 Ga0070681_101014821 189
25 3300005458 Ga0070681_11139061 Ga0070681_111390611 189
26 3300005466 Ga0070685_10099547 Ga0070685_100995472 189
27 3300005530 Ga0070679_100099719 Ga0070679_1000997193 189
28 3300005549 Ga0070704_101084209 Ga0070704_1010842091 189
29 3300005563 Ga0068855_100044082 Ga0068855_1000440824 189
30 3300005563 Ga0068855_100880709 Ga0068855_1008807092 189
31 3300005563 Ga0068855_100893356 Ga0068855_1008933562 189
32 3300005614 Ga0068856_100222782 Ga0068856_1002227822 189
33 3300005615 Ga0070702_100029393 Ga0070702_1000293933 189
34 3300005616 Ga0068852_100137284 Ga0068852_1001372843 189
35 3300005617 Ga0068859_100703251 Ga0068859_1007032512 189
36 3300005841 Ga0068863_100045568 Ga0068863_1000455682 189
37 3300005841 Ga0068863_100141907 Ga0068863_1001419072 189
38 3300005841 Ga0068863_101074146 Ga0068863_1010741462 189
39 3300005842 Ga0068858_100394375 Ga0068858_1003943752 189
40 3300005842 Ga0068858_101190015 Ga0068858_1011900152 189
41 3300005937 Ga0081455_10464119 Ga0081455_104641192 189
42 3300006028 Ga0070717_10935804 Ga0070717_109358041 189
43 3300006358 Ga0068871_100698188 Ga0068871_1006981881 189
44 3300006847 Ga0075431_100051858 Ga0075431_1000518583 189
45 3300006881 Ga0068865_100746255 Ga0068865_1007462551 189
46 3300006931 Ga0097620_100703180 Ga0097620_1007031802 189
47 3300009093 Ga0105240_10000133 Ga0105240_1000013320 189
48 3300009093 Ga0105240_10054435 Ga0105240_100544353 189
49 3300009093 Ga0105240_10077212 Ga0105240_100772123 189
50 3300009093 Ga0105240_10111188 Ga0105240_101111882 189
51 3300009093 Ga0105240_10877324 Ga0105240_108773242 189
52 3300009174 Ga0105241_10948149 Ga0105241_109481491 189
53 3300009176 Ga0105242_10392648 Ga0105242_103926481 189
54 3300009176 Ga0105242_10807624 Ga0105242_108076242 189
55 3300009551 Ga0105238_10013504 Ga0105238_100135047 189
56 3300009551 Ga0105238_10109218 Ga0105238_101092183 189
57 3300010375 Ga0105239_10024548 Ga0105239_100245485 189
58 3300013296 Ga0157374_10249945 Ga0157374_102499453 189
59 3300013296 Ga0157374_10347509 Ga0157374_103475091 189
60 3300013297 Ga0157378_10423663 Ga0157378_104236632 189
61 3300013306 Ga0163162_10313285 Ga0163162_103132851 189
62 3300013308 Ga0157375_10000037 Ga0157375_1000003765 189
63 3300014325 Ga0163163_10032082 Ga0163163_100320824 189
64 3300014325 Ga0163163_10150792 Ga0163163_101507921 189
65 3300025912 Ga0207707_10032809 Ga0207707_100328091 189
66 3300025912 Ga0207707_10039966 Ga0207707_100399664 189
67 3300025913 Ga0207695_10000222 Ga0207695_1000022297 189
68 3300025913 Ga0207695_10654955 Ga0207695_106549552 189
69 3300025919 Ga0207657_10460981 Ga0207657_104609812 189
70 3300025924 Ga0207694_10042667 Ga0207694_100426673 189
71 3300025929 Ga0207664_10005769 Ga0207664_100057696 189
72 3300025934 Ga0207686_10702351 Ga0207686_107023511 189
73 3300025936 Ga0207670_10029608 Ga0207670_100296083 189
74 3300025944 Ga0207661_10359965 Ga0207661_103599652 189
75 3300025949 Ga0207667_10009421 Ga0207667_100094214 189
76 3300025949 Ga0207667_10983791 Ga0207667_109837912 189
77 3300025949 Ga0207667_10995437 Ga0207667_109954371 189
78 3300026041 Ga0207639_10452463 Ga0207639_104524632 189
79 3300026078 Ga0207702_10174829 Ga0207702_101748292 189
80 3300026078 Ga0207702_10342338 Ga0207702_103423382 189
81 3300026088 Ga0207641_10106638 Ga0207641_101066382 189
82 3300026142 Ga0207698_11089468 Ga0207698_110894682 189
83 3300028381 Ga0268264_10377929 Ga0268264_103779292 189
84 3300028556 Ga0265337_1003526 Ga0265337_10035263 189
85 3300028563 Ga0265319_1017997 Ga0265319_10179972 189
86 3300028573 Ga0265334_10005545 Ga0265334_100055453 189
87 3300028654 Ga0265322_10041157 Ga0265322_100411572 189
88 3300028666 Ga0265336_10002734 Ga0265336_100027343 189
89 3300028800 Ga0265338_10002849 Ga0265338_1000284919 189
90 3300028800 Ga0265338_10061341 Ga0265338_100613414 189
91 3300028800 Ga0265338_10073066 Ga0265338_100730662 189
92 3300028800 Ga0265338_10114365 Ga0265338_101143652 189
93 3300028800 Ga0265338_10175385 Ga0265338_101753853 189
94 3300028800 Ga0265338_10324567 Ga0265338_103245671 189
95 3300030521 Ga0307511_10069311 Ga0307511_100693112 189
96 3300031240 Ga0265320_10202790 Ga0265320_102027903 189
97 3300031251 Ga0265327_10005833 Ga0265327_100058334 189
98 3300031344 Ga0265316_10744002 Ga0265316_107440021 189
99 3300031712 Ga0265342_10047741 Ga0265342_100477413 189
100 3300035113 Ga0373936_0328156 Ga0373936_0328156_71_640 189
101 3300035725 Ga0373947_0117699 Ga0373947_0117699_958_1527 189
102 3300036401 Ga0373937_0486846 Ga0373937_0486846_103_672 189
103 3300037068 Ga0373925_0243023 Ga0373925_0243023_423_992 189
104 3300042876 Ga0451577_0007028 Ga0451577_0007028_6693_7262 189
105 3300042876 Ga0451577_0902024 Ga0451577_0902024_153_722 189
106 3300044712 Ga0453684_0020889 Ga0453684_0020889_5234_5803 189
107 3300044712 Ga0453684_0149907 Ga0453684_0149907_1039_1623 189
108 3300044712 Ga0453684_1132535 Ga0453684_1132535_244_813 189
109 3300044712 Ga0453684_1146963 Ga0453684_1146963_19_594 189
110 3300045051 Ga0451576_0024075 Ga0451576_0024075_2694_3278 189
111 3300045051 Ga0451576_0134699 Ga0451576_0134699_1632_2201 189
112 3300045051 Ga0451576_1127096 Ga0451576_1127096_82_651 189
113 3300046459 Ga0495629_0048268 Ga0495629_0048268_1481_2050 189
114 3300046459 Ga0495629_0424274 Ga0495629_0424274_214_783 189
115 3300046461 Ga0495641_0077478 Ga0495641_0077478_242_811 189
116 3300046473 Ga0495582_0125772 Ga0495582_0125772_562_1131 189
117 3300046476 Ga0495662_0021840 Ga0495662_0021840_2256_2825 189
118 3300046514 Ga0495618_0210427 Ga0495618_0210427_382_951 189
119 3300046517 Ga0495630_0000090 Ga0495630_0000090_44432_45001 189
120 3300046526 Ga0495666_0001142 Ga0495666_0001142_6667_7236 189
121 3300046533 Ga0495640_0139686 Ga0495640_0139686_681_1250 189
122 3300046535 Ga0495586_0000059 Ga0495586_0000059_39413_39982 189
123 3300046535 Ga0495586_0400707 Ga0495586_0400707_150_719 189
124 3300046675 Ga0495657_0022845 Ga0495657_0022845_614_1183 189
125 3300046683 Ga0495658_0569792 Ga0495658_0569792_133_702 189
126 3300046684 Ga0495669_0464333 Ga0495669_0464333_28_597 189
127 3300046689 Ga0495613_0021205 Ga0495613_0021205_3969_4538 189
128 3300046689 Ga0495613_0138900 Ga0495613_0138900_710_1279 189
129 3300046689 Ga0495613_0177028 Ga0495613_0177028_902_1474 189
130 3300047315 Ga0495581_0208687 Ga0495581_0208687_298_867 189
131 3300047319 Ga0495674_0000212 Ga0495674_0000212_19303_19872 189
132 3300047321 Ga0495676_0033384 Ga0495676_0033384_3365_3934 189
133 3300047322 Ga0495680_0268560 Ga0495680_0268560_42_611 189
134 3300049570 Ga0501033_0116505 Ga0501033_0116505_1135_1704 189
135 3300049763 Ga0501266_046284 Ga0501266_046284_52_621 189
136 3300050510 nmdc:mga06r32_44459_c1 nmdc:mga06r32_44459_c1_3600_4169 189
137 3300050512 nmdc:mga0n895_942050_c1 nmdc:mga0n895_942050_c1_81_650 189
138 3300053177 Ga0500636_0230794 Ga0500636_0230794_115_684 189
139 3300003323 rootH1_10320974 rootH1_103209742 190
140 3300004799 Ga0058863_10599759 Ga0058863_105997591 190
141 3300005327 Ga0070658_10231657 Ga0070658_102316571 190
142 3300005330 Ga0070690_100142970 Ga0070690_1001429702 190
143 3300005340 Ga0070689_100001503 Ga0070689_10000150311 190
144 3300005340 Ga0070689_100128081 Ga0070689_1001280812 190
145 3300005365 Ga0070688_100250808 Ga0070688_1002508081 190
146 3300005434 Ga0070709_10096911 Ga0070709_100969112 190
147 3300005466 Ga0070685_10046922 Ga0070685_100469223 190
148 3300005466 Ga0070685_10177584 Ga0070685_101775842 190
149 3300005471 Ga0070698_100551192 Ga0070698_1005511922 190
150 3300005577 Ga0068857_100003102 Ga0068857_10000310210 190
151 3300005577 Ga0068857_100011272 Ga0068857_1000112723 190
152 3300005614 Ga0068856_100326630 Ga0068856_1003266302 190
153 3300005617 Ga0068859_100714586 Ga0068859_1007145862 190
154 3300005841 Ga0068863_100436237 Ga0068863_1004362371 190
155 3300005841 Ga0068863_100801256 Ga0068863_1008012562 190
156 3300005842 Ga0068858_100235754 Ga0068858_1002357542 190
157 3300005937 Ga0081455_10181189 Ga0081455_101811892 190
158 3300006177 Ga0075362_10101205 Ga0075362_101012052 190
159 3300006195 Ga0075366_10040693 Ga0075366_100406932 190
160 3300006237 Ga0097621_100787777 Ga0097621_1007877771 190
161 3300006237 Ga0097621_101249423 Ga0097621_1012494231 190
162 3300006931 Ga0097620_100714592 Ga0097620_1007145922 190
163 3300009094 Ga0111539_10616255 Ga0111539_106162552 190
164 3300009098 Ga0105245_10176227 Ga0105245_101762274 190
165 3300009098 Ga0105245_10587239 Ga0105245_105872392 190
166 3300009176 Ga0105242_10064594 Ga0105242_100645944 190
167 3300009176 Ga0105242_10104694 Ga0105242_101046942 190
168 3300013307 Ga0157372_10201862 Ga0157372_102018623 190
169 3300014969 Ga0157376_10275173 Ga0157376_102751732 190
170 3300025918 Ga0207662_10108691 Ga0207662_101086912 190
171 3300025921 Ga0207652_10290087 Ga0207652_102900871 190
172 3300025936 Ga0207670_10004192 Ga0207670_100041925 190
173 3300025936 Ga0207670_10160929 Ga0207670_101609291 190
174 3300025936 Ga0207670_10227436 Ga0207670_102274362 190
175 3300025941 Ga0207711_10660038 Ga0207711_106600381 190
176 3300026078 Ga0207702_10235494 Ga0207702_102354942 190
177 3300026088 Ga0207641_10540819 Ga0207641_105408191 190
178 3300026116 Ga0207674_10006455 Ga0207674_1000645510 190
179 3300026116 Ga0207674_10215013 Ga0207674_102150131 190
180 3300026116 Ga0207674_10353572 Ga0207674_103535722 190
181 3300026121 Ga0207683_10264441 Ga0207683_102644412 190
182 3300028573 Ga0265334_10064453 Ga0265334_100644532 190
183 3300028573 Ga0265334_10125864 Ga0265334_101258642 190
184 3300028577 Ga0265318_10057674 Ga0265318_100576742 190
185 3300031344 Ga0265316_10145911 Ga0265316_101459112 190
186 3300031507 Ga0307509_10027310 Ga0307509_100273108 190
187 3300035695 Ga0373927_0478337 Ga0373927_0478337_66_647 190
188 3300037471 Ga0395905_0338886 Ga0395905_0338886_279_857 190
189 3300045051 Ga0451576_0034540 Ga0451576_0034540_923_1495 190
190 3300045051 Ga0451576_0558149 Ga0451576_0558149_355_936 190
191 3300045051 Ga0451576_1769279 Ga0451576_1769279_51_626 190
192 3300046454 Ga0495592_0000008 Ga0495592_0000008_144291_144863 190
193 3300046454 Ga0495592_0047097 Ga0495592_0047097_874_1446 190
194 3300046454 Ga0495592_0512373 Ga0495592_0512373_95_667 190
195 3300046476 Ga0495662_0007038 Ga0495662_0007038_4310_4924 190
196 3300046477 Ga0495664_0004703 Ga0495664_0004703_6588_7160 190
197 3300046514 Ga0495618_0002930 Ga0495618_0002930_3547_4119 190
198 3300046516 Ga0495628_0000046 Ga0495628_0000046_78413_78985 190
199 3300046516 Ga0495628_0413245 Ga0495628_0413245_112_684 190
200 3300046517 Ga0495630_0003999 Ga0495630_0003999_1185_1757 190
201 3300046526 Ga0495666_0009355 Ga0495666_0009355_1112_1684 190
202 3300046531 Ga0495665_0277385 Ga0495665_0277385_29_601 190
203 3300046535 Ga0495586_0001308 Ga0495586_0001308_104_676 190
204 3300046543 Ga0495645_0073346 Ga0495645_0073346_754_1347 190
205 3300046543 Ga0495645_0283077 Ga0495645_0283077_442_1014 190
206 3300046678 Ga0495599_0047300 Ga0495599_0047300_1431_2003 190
207 3300046689 Ga0495613_0363434 Ga0495613_0363434_86_658 190
208 3300047315 Ga0495581_0199176 Ga0495581_0199176_537_1109 190
209 3300047319 Ga0495674_0010054 Ga0495674_0010054_1640_2212 190
210 3300049823 Ga0501044_0102071 Ga0501044_0102071_596_1183 190
211 3300049823 Ga0501044_1118751 Ga0501044_1118751_27_614 190
212 3300050489 nmdc:mga03683_78602_c1 nmdc:mga03683_78602_c1_110_682 190
213 3300050493 nmdc:mga0k408_557112_c1 nmdc:mga0k408_557112_c1_25_597 190
214 3300050508 nmdc:mga09592_710495_c1 nmdc:mga09592_710495_c1_140_715 190
215 3300050511 nmdc:mga08y16_156204_c1 nmdc:mga08y16_156204_c1_839_1414 190
216 3300050511 nmdc:mga08y16_42229_c1 nmdc:mga08y16_42229_c1_1921_2496 190
217 3300053077 Ga0495601_0111202 Ga0495601_0111202_654_1226 190
218 3300053118 Ga0500594_0044965 Ga0500594_0044965_273_845 190
219 3300009093 Ga0105240_10002761 Ga0105240_100027616 191
220 3300027907 Ga0207428_10075212 Ga0207428_100752122 192
221 3300036647 Ga0316582_0169698 Ga0316582_0169698_476_1054 192
222 3300050510 nmdc:mga06r32_232912_c1 nmdc:mga06r32_232912_c1_848_1444 192
223 3300005439 Ga0070711_100199496 Ga0070711_1001994963 193
224 3300009553 Ga0105249_10870304 Ga0105249_108703042 193
225 3300013297 Ga0157378_11336761 Ga0157378_113367611 193
226 3300035083 Ga0373926_0008310 Ga0373926_0008310_1884_2468 193
227 3300035089 Ga0373944_0083135 Ga0373944_0083135_413_997 193
228 3300035113 Ga0373936_0248960 Ga0373936_0248960_116_700 193
229 3300035692 Ga0373935_0013405 Ga0373935_0013405_3265_3849 193
230 3300035725 Ga0373947_0010147 Ga0373947_0010147_3449_4033 193
231 3300037068 Ga0373925_0001271 Ga0373925_0001271_10042_10626 193
232 3300046473 Ga0495582_0131044 Ga0495582_0131044_782_1366 193
233 3300046517 Ga0495630_0026252 Ga0495630_0026252_2128_2712 193
234 3300046526 Ga0495666_0035540 Ga0495666_0035540_1738_2322 193
235 3300047321 Ga0495676_0167974 Ga0495676_0167974_619_1203 193
236 3300005841 Ga0068863_100411966 Ga0068863_1004119662 195
237 3300025934 Ga0207686_10153286 Ga0207686_101532862 195
238 3300026088 Ga0207641_10170311 Ga0207641_101703112 195
239 3300009094 Ga0111539_10025203 Ga0111539_100252036 197
240 3300013296 Ga0157374_10497882 Ga0157374_104978821 197
241 3300025925 Ga0207650_10915420 Ga0207650_109154201 198
242 3300046461 Ga0495641_0014459 Ga0495641_0014459_1162_1758 198
243 3300046533 Ga0495640_0209977 Ga0495640_0209977_580_1176 198
244 3300046535 Ga0495586_0004099 Ga0495586_0004099_4809_5405 198
245 3300046689 Ga0495613_0099361 Ga0495613_0099361_1240_1836 198
246 3300046690 Ga0495624_0059026 Ga0495624_0059026_1525_2121 198
247 3300025913 Ga0207695_10794325 Ga0207695_107943251 201
248 3300003203 JGI25406J46586_10004645 JGI25406J46586_100046454 202
249 3300005985 Ga0081539_10004597 Ga0081539_100045975 202
250 3300037068 Ga0373925_0287522 Ga0373925_0287522_194_868 202
251 3300047444 Ga0495675_0063930 Ga0495675_0063930_1463_2101 202

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13580

SIS_2

SIS domain

41

176

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
1x92-assembly1.cif.gz_B crystal structure of pseudomonas aeruginosa phosphoheptose isomerase in complex with reaction product d-glycero-d-mannopyranose-7-phosphate 0.9202 13 193
5i01-assembly1.cif.gz_B structure of phosphoheptose isomerase gmha from neisseria gonorrhoeae 0.9133 10 193
1tk9-assembly1.cif.gz_D crystal structure of phosphoheptose isomerase 1 0.9116 13 195
5i01-assembly1.cif.gz_C structure of phosphoheptose isomerase gmha from neisseria gonorrhoeae 0.9102 10 193
3trj-assembly1.cif.gz_C structure of a phosphoheptose isomerase from francisella tularensis 0.9097 10 193
ID Description Score Start End Superfamily
5i01C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.9102 10 193 3.40.50.10490
3trjC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.8971 9 193 3.40.50.10490
2x3yA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.894 7 198 3.40.50.10490
5i01C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.8911 10 193 3.40.50.10490
3trjC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.8734 9 193 3.40.50.10490
ID Description Score Start End GO Terms
AF-A0A2E5EM19-F1-model_v4 Sugar isomerase 1 14 196 GO:0016853
GO:0097367
GO:1901135
AF-A0A0D3LLW7-F1-model_v4 Phosphoheptose isomerase 0.9976 11 200 GO:0016853
GO:0097367
GO:1901135
AF-F4L107-F1-model_v4 Sugar isomerase (SIS) 0.9908 14 195 GO:0016853
GO:0097367
GO:1901135
AF-A0A2E5EM19-F1-model_v4 Sugar isomerase 0.9894 14 196 GO:0016853
GO:0097367
GO:1901135
AF-A0A836UKR2-F1-model_v4 SIS domain-containing protein 0.9869 17 196 GO:0097367
GO:1901135

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pLDDT pTM Quality
97.27 0.92 High
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Predicted Structure (AlphaFold2)

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