F362291
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 251 | 181 | 502 | 269 |
Family's Representative Sequence
| Representative Sequence | 3300005981|Ga0081538_10000202|Ga0081538_100002024 |
| Length | 305 |
| Sequence | MLAESPTSVPHSGLSGPTDSVDRSLGGMRAWVNGTVLDDAYDRVLSVFDHGFTVGDGVFETVKVADGRPFALRRHLERLARSAEGLGLAAPDDGRVREAVAAVLDGPPYALGRLRITVTGGTSPPGSERGTEGPTLVVVAGPMDVRPELTAVVTVPWRRNDVGATAGLKTTSYAENVIALARAHERGATEAIFANTSGRLCEGTGSNVFYVRDGRLHTPTLRSGCLAGVTRALVVEWCADLAGGVVEVDEPIEVLETADEIFLASTTRDVQAVHRCDDRELSAPGPLTAAAQALWAKRAAEDLDP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 2 | 3300003911 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 5 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 7 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 8 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 9 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 22 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 25 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 28 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 30 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 31 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 32 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 33 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 34 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 35 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 36 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 37 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 38 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 39 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 40 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 41 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 42 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 43 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 44 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 45 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 46 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 47 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 82 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 83 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 85 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 86 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 87 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 88 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 89 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 90 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 91 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 92 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 93 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 94 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 95 | 3300041453 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG | Metagenome | Rhizoplane |
| 96 | 3300041486 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG | Metagenome | Rhizoplane |
| 97 | 3300041491 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG | Metagenome | Unclassified |
| 98 | 3300041501 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG | Metagenome | Unclassified |
| 99 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 100 | 3300042993 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 | Metagenome | Rhizosphere |
| 101 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 102 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 103 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 104 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 105 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 106 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 107 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 108 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 114 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 115 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 116 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 117 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 118 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 119 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 120 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 121 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 122 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 123 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 130 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 133 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 137 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 139 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 140 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 141 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 142 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 143 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 144 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 145 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 146 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 147 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 148 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 149 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 150 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 151 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 152 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 153 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 154 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 155 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 156 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 157 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 158 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 159 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 160 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 161 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 162 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 163 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 164 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 165 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 166 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 167 | 2643221576 | Nocardioides sp. Root614 | Isolate | Unclassified |
| 168 | 2643221590 | Nocardioides sp. Root682 | Isolate | Unclassified |
| 169 | 2643221604 | Nocardioides sp. Root190 | Isolate | Unclassified |
| 170 | 2643221617 | Nocardioides sp. Root79 | Isolate | Unclassified |
| 171 | 2643221620 | Nocardioides sp. Root240 | Isolate | Unclassified |
| 172 | 2731639228 | Motilibacter peucedani DSM 45328 | Isolate | Rhizosphere |
| 173 | 2738541305 | Nocardioides sp. CF167 | Isolate | Unclassified |
| 174 | 2799112218 | Motilibacter rhizosphaerae DSM 45622 | Isolate | Rhizosphere |
| 175 | 2811994874 | Nocardioides sp. SLBN-35 | Isolate | Unclassified |
| 176 | 2835188231 | Isoptericola variabilis JZ7 | Isolate | Unclassified |
| 177 | 2837268691 | Jiangella endophytica KE2-3 | Isolate | Rhizosphere |
| 178 | 2873314349 | Sphaerisporangium siamense DSM 45784 | Isolate | Rhizosphere |
| 179 | 3006321560 | Actinacidiphila epipremni PRB2-1 | Isolate | Unclassified |
| 180 | 8055066027 | Sphaerisporangium corydalis NEAU-YHS15 | Isolate | Unclassified |
| 181 | 8055172936 | Sphaerisporangium perillae NEAU-ZS1 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 94.02 |
| Metatranscriptomes | 0 |
| Isolates | 5.98 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 8.76 |
| Nodule | 0 |
| Rhizoplane | 6.37 |
| Rhizosphere | 78.88 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.4 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0081538_10000202 | 3300005981 | Bacteria | 66057 |
| 2 | JGI25405J52794_10011567 | 3300003911 | Bacteria | 1690 |
| 3 | Ga0070683_100069234 | 3300005329 | Bacteria | 3289 |
| 4 | Ga0070683_100100462 | 3300005329 | Bacteria | 2723 |
| 5 | Ga0068869_100689626 | 3300005334 | Bacteria | 870 |
| 6 | Ga0070682_100013199 | 3300005337 | Bacteria | 4748 |
| 7 | Ga0070682_100060534 | 3300005337 | Bacteria | 2395 |
| 8 | Ga0070689_100245985 | 3300005340 | Bacteria | 1475 |
| 9 | Ga0070691_10040223 | 3300005341 | Bacteria | 2210 |
| 10 | Ga0070687_100025871 | 3300005343 | Bacteria | 2820 |
| 11 | Ga0070692_10048498 | 3300005345 | Bacteria | 2200 |
| 12 | Ga0070668_100133051 | 3300005347 | Bacteria | 1998 |
| 13 | Ga0070669_100071905 | 3300005353 | Bacteria | 2560 |
| 14 | Ga0070675_100161244 | 3300005354 | Bacteria | 1929 |
| 15 | Ga0070673_100208725 | 3300005364 | Bacteria | 1686 |
| 16 | Ga0070659_100060338 | 3300005366 | Bacteria | 2996 |
| 17 | Ga0070667_100101686 | 3300005367 | Bacteria | 2483 |
| 18 | Ga0070703_10140442 | 3300005406 | Bacteria | 897 |
| 19 | Ga0070714_100005974 | 3300005435 | Bacteria | 9347 |
| 20 | Ga0070701_10031735 | 3300005438 | Bacteria | 2623 |
| 21 | Ga0070700_100002220 | 3300005441 | Bacteria | 9880 |
| 22 | Ga0070663_100204257 | 3300005455 | Bacteria | 1543 |
| 23 | Ga0070685_10069601 | 3300005466 | Bacteria | 2082 |
| 24 | Ga0070706_100036744 | 3300005467 | Bacteria | 4524 |
| 25 | Ga0070698_100018287 | 3300005471 | Bacteria | 7379 |
| 26 | Ga0068853_100114231 | 3300005539 | Bacteria | 2402 |
| 27 | Ga0070672_100069911 | 3300005543 | Bacteria | 2789 |
| 28 | Ga0070665_100111334 | 3300005548 | Bacteria | 2740 |
| 29 | Ga0068854_100079346 | 3300005578 | Bacteria | 2420 |
| 30 | Ga0070702_100043071 | 3300005615 | Bacteria | 2541 |
| 31 | Ga0068852_100023090 | 3300005616 | Bacteria | 5000 |
| 32 | Ga0068852_100333649 | 3300005616 | Bacteria | 1476 |
| 33 | Ga0068866_10054888 | 3300005718 | Bacteria | 2044 |
| 34 | Ga0068861_100023246 | 3300005719 | Bacteria | 4470 |
| 35 | Ga0068870_10001154 | 3300005840 | Bacteria | 10567 |
| 36 | Ga0068860_100085727 | 3300005843 | Bacteria | 2997 |
| 37 | Ga0081455_10013698 | 3300005937 | Bacteria | 7985 |
| 38 | Ga0081455_10024318 | 3300005937 | Bacteria | 5611 |
| 39 | Ga0075365_10059687 | 3300006038 | Bacteria | 2543 |
| 40 | Ga0075365_10120675 | 3300006038 | Bacteria | 1808 |
| 41 | Ga0075365_10201179 | 3300006038 | Bacteria | 1395 |
| 42 | Ga0075368_10094056 | 3300006042 | Bacteria | 1227 |
| 43 | Ga0075363_100001547 | 3300006048 | Bacteria | 8825 |
| 44 | Ga0075363_100173011 | 3300006048 | Bacteria | 1226 |
| 45 | Ga0075363_100211670 | 3300006048 | Bacteria | 1110 |
| 46 | Ga0075364_10005355 | 3300006051 | Bacteria | 7453 |
| 47 | Ga0075364_10027156 | 3300006051 | Bacteria | 3655 |
| 48 | Ga0075364_10240977 | 3300006051 | Bacteria | 1228 |
| 49 | Ga0075362_10053362 | 3300006177 | Bacteria | 1814 |
| 50 | Ga0075370_10006541 | 3300006353 | Bacteria | 5870 |
| 51 | Ga0075428_100027966 | 3300006844 | Bacteria | 6239 |
| 52 | Ga0075431_100006162 | 3300006847 | Bacteria | 11898 |
| 53 | Ga0075431_100007704 | 3300006847 | Bacteria | 10723 |
| 54 | Ga0075433_10103526 | 3300006852 | Bacteria | 2521 |
| 55 | Ga0075434_100733309 | 3300006871 | Bacteria | 1005 |
| 56 | Ga0075429_100016783 | 3300006880 | Bacteria | 6338 |
| 57 | Ga0068865_100082403 | 3300006881 | Bacteria | 2312 |
| 58 | Ga0111539_10009374 | 3300009094 | Bacteria | 12359 |
| 59 | Ga0111539_10023041 | 3300009094 | Bacteria | 7648 |
| 60 | Ga0105245_10072299 | 3300009098 | Bacteria | 3133 |
| 61 | Ga0105245_10180597 | 3300009098 | Bacteria | 2016 |
| 62 | Ga0105243_10033196 | 3300009148 | Bacteria | 3991 |
| 63 | Ga0105243_10199751 | 3300009148 | Bacteria | 1753 |
| 64 | Ga0105242_10036911 | 3300009176 | Bacteria | 3923 |
| 65 | Ga0105242_10085089 | 3300009176 | Bacteria | 2651 |
| 66 | Ga0105248_10016749 | 3300009177 | Bacteria | 8070 |
| 67 | Ga0105238_10164279 | 3300009551 | Bacteria | 2196 |
| 68 | Ga0105249_10102485 | 3300009553 | Bacteria | 2694 |
| 69 | Ga0105239_10128345 | 3300010375 | Bacteria | 2819 |
| 70 | Ga0105246_10049602 | 3300011119 | Bacteria | 2875 |
| 71 | Ga0157372_10095703 | 3300013307 | Bacteria | 3383 |
| 72 | Ga0157372_10634894 | 3300013307 | Bacteria | 1244 |
| 73 | Ga0157380_10048520 | 3300014326 | Bacteria | 3345 |
| 74 | Ga0157380_10419022 | 3300014326 | Bacteria | 1276 |
| 75 | Ga0157377_10023398 | 3300014745 | Bacteria | 3273 |
| 76 | Ga0157376_10247485 | 3300014969 | Bacteria | 1663 |
| 77 | Ga0207688_10023619 | 3300025901 | Bacteria | 3369 |
| 78 | Ga0207643_10002565 | 3300025908 | Bacteria | 9841 |
| 79 | Ga0207684_10163826 | 3300025910 | Bacteria | 1915 |
| 80 | Ga0207662_10082178 | 3300025918 | Bacteria | 1967 |
| 81 | Ga0207652_10059151 | 3300025921 | Bacteria | 3303 |
| 82 | Ga0207652_10381217 | 3300025921 | Bacteria | 1272 |
| 83 | Ga0207659_10131964 | 3300025926 | Bacteria | 1929 |
| 84 | Ga0207687_10135591 | 3300025927 | Bacteria | 1861 |
| 85 | Ga0207690_10020754 | 3300025932 | Bacteria | 4063 |
| 86 | Ga0207686_10196851 | 3300025934 | Bacteria | 1440 |
| 87 | Ga0207709_10040723 | 3300025935 | Bacteria | 2784 |
| 88 | Ga0207709_10202013 | 3300025935 | Bacteria | 1420 |
| 89 | Ga0207704_10137540 | 3300025938 | Bacteria | 1703 |
| 90 | Ga0207691_10066757 | 3300025940 | Bacteria | 3254 |
| 91 | Ga0207711_10289545 | 3300025941 | Bacteria | 1509 |
| 92 | Ga0207689_10575893 | 3300025942 | Bacteria | 946 |
| 93 | Ga0207661_10106456 | 3300025944 | Bacteria | 2364 |
| 94 | Ga0207679_10178185 | 3300025945 | Bacteria | 1756 |
| 95 | Ga0207668_10086108 | 3300025972 | Bacteria | 2295 |
| 96 | Ga0207677_10325380 | 3300026023 | Bacteria | 1279 |
| 97 | Ga0207708_10000537 | 3300026075 | Bacteria | 29305 |
| 98 | Ga0207648_10112302 | 3300026089 | Bacteria | 2393 |
| 99 | Ga0207675_100031324 | 3300026118 | Bacteria | 4955 |
| 100 | Ga0209813_10006914 | 3300027866 | Bacteria | 2815 |
| 101 | Ga0207428_10002060 | 3300027907 | Bacteria | 20290 |
| 102 | Ga0268266_10135822 | 3300028379 | Bacteria | 2203 |
| 103 | Ga0316579_10139022 | 3300031691 | Bacteria | 1171 |
| 104 | Ga0316576_10037881 | 3300031727 | Bacteria | 3454 |
| 105 | Ga0316576_10067484 | 3300031727 | Bacteria | 2633 |
| 106 | Ga0316585_10012087 | 3300032137 | Bacteria | 2553 |
| 107 | Ga0316580_10017204 | 3300032139 | Bacteria | 2222 |
| 108 | Ga0307507_10003290 | 3300033179 | Bacteria | 31736 |
| 109 | Ga0316574_0022729 | 3300035398 | Bacteria | 3737 |
| 110 | Ga0316584_0007370 | 3300036712 | Bacteria | 7514 |
| 111 | Ga0316584_0199824 | 3300036712 | Bacteria | 1475 |
| 112 | Ga0316584_0400783 | 3300036712 | Bacteria | 977 |
| 113 | Ga0395899_0027787 | 3300037312 | Bacteria | 4262 |
| 114 | Ga0395899_0166293 | 3300037312 | Bacteria | 1556 |
| 115 | Ga0395900_0051763 | 3300037418 | Bacteria | 4229 |
| 116 | Ga0395900_0173438 | 3300037418 | Bacteria | 2194 |
| 117 | Ga0395898_0009822 | 3300037466 | Bacteria | 10031 |
| 118 | Ga0395898_0127584 | 3300037466 | Bacteria | 2437 |
| 119 | Ga0395901_0106269 | 3300038443 | Bacteria | 2946 |
| 120 | Ga0395901_0180351 | 3300038443 | Bacteria | 2215 |
| 121 | Ga0451797_0908435 | 3300041453 | Bacteria | 1276 |
| 122 | Ga0451807_0801990 | 3300041486 | Bacteria | 843 |
| 123 | Ga0451833_0116255 | 3300041491 | Bacteria | 3778 |
| 124 | Ga0451845_0060217 | 3300041501 | Bacteria | 2726 |
| 125 | Ga0451853_1931541 | 3300041512 | Bacteria | 1265 |
| 126 | Ga0439440_0026303 | 3300042993 | Bacteria | 1346 |
| 127 | Ga0466965_0027821 | 3300044683 | Bacteria | 2744 |
| 128 | Ga0466965_0050366 | 3300044683 | Bacteria | 2065 |
| 129 | Ga0466966_0006347 | 3300044684 | Bacteria | 7817 |
| 130 | Ga0466966_0113535 | 3300044684 | Bacteria | 1668 |
| 131 | Ga0466961_0210079 | 3300044693 | Bacteria | 1202 |
| 132 | Ga0466957_0035413 | 3300044842 | Bacteria | 2995 |
| 133 | Ga0466959_0094524 | 3300045049 | Bacteria | 2144 |
| 134 | Ga0466958_0039404 | 3300045836 | Bacteria | 2839 |
| 135 | Ga0466967_0288256 | 3300045976 | Bacteria | 1576 |
| 136 | Ga0466967_0405918 | 3300045976 | Bacteria | 1326 |
| 137 | Ga0466967_0469073 | 3300045976 | Bacteria | 1232 |
| 138 | Ga0466967_0550288 | 3300045976 | Bacteria | 1136 |
| 139 | Ga0495585_0035377 | 3300046492 | Bacteria | 2823 |
| 140 | Ga0495628_0049958 | 3300046516 | Bacteria | 3309 |
| 141 | Ga0495640_0030192 | 3300046533 | Bacteria | 3883 |
| 142 | Ga0495599_0071773 | 3300046678 | Bacteria | 2161 |
| 143 | Ga0495604_0036327 | 3300047317 | Bacteria | 3884 |
| 144 | Ga0496100_0164762 | 3300048903 | Bacteria | 1591 |
| 145 | Ga0496102_0167978 | 3300048905 | Bacteria | 2065 |
| 146 | Ga0496106_0115221 | 3300048909 | Bacteria | 2096 |
| 147 | Ga0496106_0189108 | 3300048909 | Bacteria | 1636 |
| 148 | Ga0496107_0610792 | 3300048910 | Bacteria | 805 |
| 149 | Ga0496108_0257798 | 3300048911 | Bacteria | 1517 |
| 150 | Ga0496109_0233817 | 3300048912 | Bacteria | 1729 |
| 151 | Ga0496110_0431866 | 3300048913 | Bacteria | 1200 |
| 152 | Ga0496111_0077060 | 3300048914 | Bacteria | 2430 |
| 153 | Ga0496111_0090120 | 3300048914 | Bacteria | 2246 |
| 154 | Ga0496113_0023589 | 3300048916 | Bacteria | 4363 |
| 155 | Ga0496114_0020369 | 3300048917 | Bacteria | 5383 |
| 156 | Ga0496114_0085921 | 3300048917 | Bacteria | 2665 |
| 157 | Ga0496114_0190382 | 3300048917 | Bacteria | 1795 |
| 158 | Ga0501031_0004964 | 3300049568 | Bacteria | 8650 |
| 159 | Ga0501031_0197830 | 3300049568 | Bacteria | 1312 |
| 160 | Ga0501032_0023196 | 3300049569 | Bacteria | 4293 |
| 161 | Ga0501034_0038075 | 3300049571 | Bacteria | 4871 |
| 162 | Ga0501036_0021490 | 3300049572 | Bacteria | 5426 |
| 163 | Ga0501037_0003754 | 3300049573 | Bacteria | 11019 |
| 164 | Ga0501038_0012536 | 3300049574 | Bacteria | 7745 |
| 165 | Ga0501039_0111510 | 3300049575 | Bacteria | 2138 |
| 166 | Ga0501039_0350555 | 3300049575 | Bacteria | 1160 |
| 167 | Ga0501040_0028113 | 3300049576 | Bacteria | 3789 |
| 168 | Ga0501041_0004620 | 3300049577 | Bacteria | 7989 |
| 169 | Ga0501042_0071297 | 3300049578 | Bacteria | 2485 |
| 170 | Ga0501043_0018627 | 3300049579 | Bacteria | 5448 |
| 171 | Ga0501046_0027271 | 3300049580 | Bacteria | 4662 |
| 172 | Ga0501046_0070996 | 3300049580 | Bacteria | 2706 |
| 173 | Ga0501047_0000268 | 3300049581 | Bacteria | 60315 |
| 174 | Ga0501047_0013588 | 3300049581 | Bacteria | 7721 |
| 175 | Ga0501047_0060755 | 3300049581 | Bacteria | 3646 |
| 176 | Ga0501047_0169683 | 3300049581 | Bacteria | 2051 |
| 177 | Ga0501048_0009213 | 3300049582 | Bacteria | 7416 |
| 178 | Ga0501048_0102434 | 3300049582 | Bacteria | 2020 |
| 179 | Ga0501067_0002075 | 3300049583 | Bacteria | 11034 |
| 180 | Ga0501067_0003021 | 3300049583 | Bacteria | 9288 |
| 181 | Ga0501067_0170997 | 3300049583 | Bacteria | 1210 |
| 182 | Ga0501067_0195311 | 3300049583 | Bacteria | 1127 |
| 183 | Ga0501067_0266496 | 3300049583 | Bacteria | 954 |
| 184 | Ga0501068_0003051 | 3300049584 | Bacteria | 8944 |
| 185 | Ga0501068_0015900 | 3300049584 | Bacteria | 4333 |
| 186 | Ga0501068_0223976 | 3300049584 | Bacteria | 1196 |
| 187 | Ga0501069_0002350 | 3300049585 | Bacteria | 9582 |
| 188 | Ga0501069_0032059 | 3300049585 | Bacteria | 2892 |
| 189 | Ga0501069_0162163 | 3300049585 | Bacteria | 1288 |
| 190 | Ga0501070_0005949 | 3300049586 | Bacteria | 10398 |
| 191 | Ga0501070_0054901 | 3300049586 | Bacteria | 3303 |
| 192 | Ga0501070_0122109 | 3300049586 | Bacteria | 2153 |
| 193 | Ga0501070_0197854 | 3300049586 | Bacteria | 1650 |
| 194 | Ga0501071_0010819 | 3300049587 | Bacteria | 6120 |
| 195 | Ga0501072_0014653 | 3300049588 | Bacteria | 6010 |
| 196 | Ga0501072_0085638 | 3300049588 | Bacteria | 2500 |
| 197 | Ga0501073_0004555 | 3300049589 | Bacteria | 10420 |
| 198 | Ga0501073_0056797 | 3300049589 | Bacteria | 2737 |
| 199 | Ga0501074_0048387 | 3300049590 | Bacteria | 3071 |
| 200 | Ga0501074_0194900 | 3300049590 | Bacteria | 1444 |
| 201 | Ga0501076_0052799 | 3300049592 | Bacteria | 3220 |
| 202 | Ga0501077_0019823 | 3300049593 | Bacteria | 4254 |
| 203 | Ga0501077_0358636 | 3300049593 | Bacteria | 931 |
| 204 | Ga0501079_0010370 | 3300049741 | Bacteria | 7080 |
| 205 | Ga0501079_0039075 | 3300049741 | Bacteria | 3660 |
| 206 | Ga0501080_0011044 | 3300049742 | Bacteria | 8264 |
| 207 | Ga0501080_0064777 | 3300049742 | Bacteria | 3399 |
| 208 | Ga0501083_0003712 | 3300049744 | Bacteria | 10727 |
| 209 | Ga0501083_0006367 | 3300049744 | Bacteria | 8366 |
| 210 | Ga0501035_0015461 | 3300049822 | Bacteria | 7039 |
| 211 | Ga0501035_0432234 | 3300049822 | Bacteria | 1091 |
| 212 | Ga0501044_0043449 | 3300049823 | Bacteria | 4668 |
| 213 | Ga0501044_0113143 | 3300049823 | Bacteria | 2721 |
| 214 | Ga0501044_0409967 | 3300049823 | Bacteria | 1266 |
| 215 | Ga0501045_0053340 | 3300049824 | Bacteria | 2954 |
| 216 | nmdc:mga03n38_29198_c1 | 3300050490 | Bacteria | 2306 |
| 217 | nmdc:mga00v17_19741_c1 | 3300050491 | Bacteria | 3853 |
| 218 | nmdc:mga00v17_40194_c1 | 3300050491 | Bacteria | 2805 |
| 219 | nmdc:mga00v17_8944_c1 | 3300050491 | Bacteria | 5403 |
| 220 | nmdc:mga0yw44_126817_c1 | 3300050492 | Bacteria | 1649 |
| 221 | nmdc:mga0yw44_57492_c1 | 3300050492 | Bacteria | 2373 |
| 222 | nmdc:mga06z11_59097_c1 | 3300050494 | Bacteria | 1992 |
| 223 | nmdc:mga07m45_4087_c1 | 3300050496 | Bacteria | 7118 |
| 224 | nmdc:mga05p37_24556_c1 | 3300050507 | Bacteria | 7327 |
| 225 | nmdc:mga09592_11484_c1 | 3300050508 | Bacteria | 7208 |
| 226 | nmdc:mga0qj67_48265_c1 | 3300050509 | Bacteria | 3363 |
| 227 | nmdc:mga06r32_1361_c1 | 3300050510 | Bacteria | 22083 |
| 228 | nmdc:mga06r32_606_c1 | 3300050510 | Bacteria | 31310 |
| 229 | nmdc:mga08y16_2341_c1 | 3300050511 | Bacteria | 19419 |
| 230 | Ga0495612_0026541 | 3300053078 | Bacteria | 2328 |
| 231 | Ga0500593_000063 | 3300053117 | Bacteria | 39478 |
| 232 | Ga0501084_0001281 | 3300054114 | Bacteria | 19799 |
| 233 | Ga0501084_0013752 | 3300054114 | Bacteria | 6697 |
| 234 | Ga0501082_0036414 | 3300060353 | Bacteria | 4240 |
| 235 | Ga0501082_0230762 | 3300060353 | Unclassified | 1611 |
| 236 | Ga0501082_0292717 | 3300060353 | Bacteria | 1417 |
| 237 | 2643891605 | 2643221576 | Bacteria | 5214352 |
| 238 | 2643960653 | 2643221590 | Bacteria | 5214697 |
| 239 | 2644035830 | 2643221604 | Bacteria | 5014917 |
| 240 | 2644102272 | 2643221617 | Bacteria | 5139111 |
| 241 | 2644115496 | 2643221620 | Bacteria | 5134593 |
| 242 | 2731906904 | 2731639228 | Bacteria | 4187555 |
| 243 | 2738871775 | 2738541305 | Bacteria | 4910150 |
| 244 | 2799184032 | 2799112218 | Bacteria | 4315149 |
| 245 | 2812333211 | 2811994874 | Bacteria | 5367947 |
| 246 | 2835190165 | 2835188231 | Bacteria | 3476928 |
| 247 | 2837270412 | 2837268691 | Bacteria | 7850704 |
| 248 | 2873319234 | 2873314349 | Bacteria | 8512634 |
| 249 | 3006327962 | 3006321560 | Bacteria | 8247479 |
| 250 | 8055068571 | 8055066027 | Bacteria | 9479577 |
| 251 | 8055181599 | 8055172936 | Bacteria | 9305943 |
| 252 | Ga0081538_10000202 | |||
| 253 | JGI25405J52794_10011567 | |||
| 254 | Ga0070683_100069234 | |||
| 255 | Ga0070683_100100462 | |||
| 256 | Ga0068869_100689626 | |||
| 257 | Ga0070682_100013199 | |||
| 258 | Ga0070682_100060534 | |||
| 259 | Ga0070689_100245985 | |||
| 260 | Ga0070691_10040223 | |||
| 261 | Ga0070687_100025871 | |||
| 262 | Ga0070692_10048498 | |||
| 263 | Ga0070668_100133051 | |||
| 264 | Ga0070669_100071905 | |||
| 265 | Ga0070675_100161244 | |||
| 266 | Ga0070673_100208725 | |||
| 267 | Ga0070659_100060338 | |||
| 268 | Ga0070667_100101686 | |||
| 269 | Ga0070703_10140442 | |||
| 270 | Ga0070714_100005974 | |||
| 271 | Ga0070701_10031735 | |||
| 272 | Ga0070700_100002220 | |||
| 273 | Ga0070663_100204257 | |||
| 274 | Ga0070685_10069601 | |||
| 275 | Ga0070706_100036744 | |||
| 276 | Ga0070698_100018287 | |||
| 277 | Ga0068853_100114231 | |||
| 278 | Ga0070672_100069911 | |||
| 279 | Ga0070665_100111334 | |||
| 280 | Ga0068854_100079346 | |||
| 281 | Ga0070702_100043071 | |||
| 282 | Ga0068852_100023090 | |||
| 283 | Ga0068852_100333649 | |||
| 284 | Ga0068866_10054888 | |||
| 285 | Ga0068861_100023246 | |||
| 286 | Ga0068870_10001154 | |||
| 287 | Ga0068860_100085727 | |||
| 288 | Ga0081455_10013698 | |||
| 289 | Ga0081455_10024318 | |||
| 290 | Ga0075365_10059687 | |||
| 291 | Ga0075365_10120675 | |||
| 292 | Ga0075365_10201179 | |||
| 293 | Ga0075368_10094056 | |||
| 294 | Ga0075363_100001547 | |||
| 295 | Ga0075363_100173011 | |||
| 296 | Ga0075363_100211670 | |||
| 297 | Ga0075364_10005355 | |||
| 298 | Ga0075364_10027156 | |||
| 299 | Ga0075364_10240977 | |||
| 300 | Ga0075362_10053362 | |||
| 301 | Ga0075370_10006541 | |||
| 302 | Ga0075428_100027966 | |||
| 303 | Ga0075431_100006162 | |||
| 304 | Ga0075431_100007704 | |||
| 305 | Ga0075433_10103526 | |||
| 306 | Ga0075434_100733309 | |||
| 307 | Ga0075429_100016783 | |||
| 308 | Ga0068865_100082403 | |||
| 309 | Ga0111539_10009374 | |||
| 310 | Ga0111539_10023041 | |||
| 311 | Ga0105245_10072299 | |||
| 312 | Ga0105245_10180597 | |||
| 313 | Ga0105243_10033196 | |||
| 314 | Ga0105243_10199751 | |||
| 315 | Ga0105242_10036911 | |||
| 316 | Ga0105242_10085089 | |||
| 317 | Ga0105248_10016749 | |||
| 318 | Ga0105238_10164279 | |||
| 319 | Ga0105249_10102485 | |||
| 320 | Ga0105239_10128345 | |||
| 321 | Ga0105246_10049602 | |||
| 322 | Ga0157372_10095703 | |||
| 323 | Ga0157372_10634894 | |||
| 324 | Ga0157380_10048520 | |||
| 325 | Ga0157380_10419022 | |||
| 326 | Ga0157377_10023398 | |||
| 327 | Ga0157376_10247485 | |||
| 328 | Ga0207688_10023619 | |||
| 329 | Ga0207643_10002565 | |||
| 330 | Ga0207684_10163826 | |||
| 331 | Ga0207662_10082178 | |||
| 332 | Ga0207652_10059151 | |||
| 333 | Ga0207652_10381217 | |||
| 334 | Ga0207659_10131964 | |||
| 335 | Ga0207687_10135591 | |||
| 336 | Ga0207690_10020754 | |||
| 337 | Ga0207686_10196851 | |||
| 338 | Ga0207709_10040723 | |||
| 339 | Ga0207709_10202013 | |||
| 340 | Ga0207704_10137540 | |||
| 341 | Ga0207691_10066757 | |||
| 342 | Ga0207711_10289545 | |||
| 343 | Ga0207689_10575893 | |||
| 344 | Ga0207661_10106456 | |||
| 345 | Ga0207679_10178185 | |||
| 346 | Ga0207668_10086108 | |||
| 347 | Ga0207677_10325380 | |||
| 348 | Ga0207708_10000537 | |||
| 349 | Ga0207648_10112302 | |||
| 350 | Ga0207675_100031324 | |||
| 351 | Ga0209813_10006914 | |||
| 352 | Ga0207428_10002060 | |||
| 353 | Ga0268266_10135822 | |||
| 354 | Ga0316579_10139022 | |||
| 355 | Ga0316576_10037881 | |||
| 356 | Ga0316576_10067484 | |||
| 357 | Ga0316585_10012087 | |||
| 358 | Ga0316580_10017204 | |||
| 359 | Ga0307507_10003290 | |||
| 360 | Ga0316574_0022729 | |||
| 361 | Ga0316584_0007370 | |||
| 362 | Ga0316584_0199824 | |||
| 363 | Ga0316584_0400783 | |||
| 364 | Ga0395899_0027787 | |||
| 365 | Ga0395899_0166293 | |||
| 366 | Ga0395900_0051763 | |||
| 367 | Ga0395900_0173438 | |||
| 368 | Ga0395898_0009822 | |||
| 369 | Ga0395898_0127584 | |||
| 370 | Ga0395901_0106269 | |||
| 371 | Ga0395901_0180351 | |||
| 372 | Ga0451797_0908435 | |||
| 373 | Ga0451807_0801990 | |||
| 374 | Ga0451833_0116255 | |||
| 375 | Ga0451845_0060217 | |||
| 376 | Ga0451853_1931541 | |||
| 377 | Ga0439440_0026303 | |||
| 378 | Ga0466965_0027821 | |||
| 379 | Ga0466965_0050366 | |||
| 380 | Ga0466966_0006347 | |||
| 381 | Ga0466966_0113535 | |||
| 382 | Ga0466961_0210079 | |||
| 383 | Ga0466957_0035413 | |||
| 384 | Ga0466959_0094524 | |||
| 385 | Ga0466958_0039404 | |||
| 386 | Ga0466967_0288256 | |||
| 387 | Ga0466967_0405918 | |||
| 388 | Ga0466967_0469073 | |||
| 389 | Ga0466967_0550288 | |||
| 390 | Ga0495585_0035377 | |||
| 391 | Ga0495628_0049958 | |||
| 392 | Ga0495640_0030192 | |||
| 393 | Ga0495599_0071773 | |||
| 394 | Ga0495604_0036327 | |||
| 395 | Ga0496100_0164762 | |||
| 396 | Ga0496102_0167978 | |||
| 397 | Ga0496106_0115221 | |||
| 398 | Ga0496106_0189108 | |||
| 399 | Ga0496107_0610792 | |||
| 400 | Ga0496108_0257798 | |||
| 401 | Ga0496109_0233817 | |||
| 402 | Ga0496110_0431866 | |||
| 403 | Ga0496111_0077060 | |||
| 404 | Ga0496111_0090120 | |||
| 405 | Ga0496113_0023589 | |||
| 406 | Ga0496114_0020369 | |||
| 407 | Ga0496114_0085921 | |||
| 408 | Ga0496114_0190382 | |||
| 409 | Ga0501031_0004964 | |||
| 410 | Ga0501031_0197830 | |||
| 411 | Ga0501032_0023196 | |||
| 412 | Ga0501034_0038075 | |||
| 413 | Ga0501036_0021490 | |||
| 414 | Ga0501037_0003754 | |||
| 415 | Ga0501038_0012536 | |||
| 416 | Ga0501039_0111510 | |||
| 417 | Ga0501039_0350555 | |||
| 418 | Ga0501040_0028113 | |||
| 419 | Ga0501041_0004620 | |||
| 420 | Ga0501042_0071297 | |||
| 421 | Ga0501043_0018627 | |||
| 422 | Ga0501046_0027271 | |||
| 423 | Ga0501046_0070996 | |||
| 424 | Ga0501047_0000268 | |||
| 425 | Ga0501047_0013588 | |||
| 426 | Ga0501047_0060755 | |||
| 427 | Ga0501047_0169683 | |||
| 428 | Ga0501048_0009213 | |||
| 429 | Ga0501048_0102434 | |||
| 430 | Ga0501067_0002075 | |||
| 431 | Ga0501067_0003021 | |||
| 432 | Ga0501067_0170997 | |||
| 433 | Ga0501067_0195311 | |||
| 434 | Ga0501067_0266496 | |||
| 435 | Ga0501068_0003051 | |||
| 436 | Ga0501068_0015900 | |||
| 437 | Ga0501068_0223976 | |||
| 438 | Ga0501069_0002350 | |||
| 439 | Ga0501069_0032059 | |||
| 440 | Ga0501069_0162163 | |||
| 441 | Ga0501070_0005949 | |||
| 442 | Ga0501070_0054901 | |||
| 443 | Ga0501070_0122109 | |||
| 444 | Ga0501070_0197854 | |||
| 445 | Ga0501071_0010819 | |||
| 446 | Ga0501072_0014653 | |||
| 447 | Ga0501072_0085638 | |||
| 448 | Ga0501073_0004555 | |||
| 449 | Ga0501073_0056797 | |||
| 450 | Ga0501074_0048387 | |||
| 451 | Ga0501074_0194900 | |||
| 452 | Ga0501076_0052799 | |||
| 453 | Ga0501077_0019823 | |||
| 454 | Ga0501077_0358636 | |||
| 455 | Ga0501079_0010370 | |||
| 456 | Ga0501079_0039075 | |||
| 457 | Ga0501080_0011044 | |||
| 458 | Ga0501080_0064777 | |||
| 459 | Ga0501083_0003712 | |||
| 460 | Ga0501083_0006367 | |||
| 461 | Ga0501035_0015461 | |||
| 462 | Ga0501035_0432234 | |||
| 463 | Ga0501044_0043449 | |||
| 464 | Ga0501044_0113143 | |||
| 465 | Ga0501044_0409967 | |||
| 466 | Ga0501045_0053340 | |||
| 467 | nmdc:mga03n38_29198_c1 | |||
| 468 | nmdc:mga00v17_19741_c1 | |||
| 469 | nmdc:mga00v17_40194_c1 | |||
| 470 | nmdc:mga00v17_8944_c1 | |||
| 471 | nmdc:mga0yw44_126817_c1 | |||
| 472 | nmdc:mga0yw44_57492_c1 | |||
| 473 | nmdc:mga06z11_59097_c1 | |||
| 474 | nmdc:mga07m45_4087_c1 | |||
| 475 | nmdc:mga05p37_24556_c1 | |||
| 476 | nmdc:mga09592_11484_c1 | |||
| 477 | nmdc:mga0qj67_48265_c1 | |||
| 478 | nmdc:mga06r32_1361_c1 | |||
| 479 | nmdc:mga06r32_606_c1 | |||
| 480 | nmdc:mga08y16_2341_c1 | |||
| 481 | Ga0495612_0026541 | |||
| 482 | Ga0500593_000063 | |||
| 483 | Ga0501084_0001281 | |||
| 484 | Ga0501084_0013752 | |||
| 485 | Ga0501082_0036414 | |||
| 486 | Ga0501082_0230762 | |||
| 487 | Ga0501082_0292717 | |||
| 488 | 2643891605 | |||
| 489 | 2643960653 | |||
| 490 | 2644035830 | |||
| 491 | 2644102272 | |||
| 492 | 2644115496 | |||
| 493 | 2731906904 | |||
| 494 | 2738871775 | |||
| 495 | 2799184032 | |||
| 496 | 2812333211 | |||
| 497 | 2835190165 | |||
| 498 | 2837270412 | |||
| 499 | 2873319234 | |||
| 500 | 3006327962 | |||
| 501 | 8055068571 | |||
| 502 | 8055181599 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5e25-assembly2.cif.gz_B-2 | crystal structure of branched-chain aminotransferase from thermophilic archaea geoglobus acetivorans complexed with alpha-ketoglutarate | 0.9382 | 1 | 274 |
| 5cm0-assembly1.cif.gz_C-2 | crystal structure of branched-chain aminotransferase from thermophilic archaea geoglobus acetivorans | 0.929 | 1 | 274 |
| 3lul-assembly1.cif.gz_A | crystal structure of putative 4-amino-4-deoxychorismate lyase. (yp_094631.1) from legionella pneumophila subsp. pneumophila str. philadelphia 1 at 1.78 a resolution | 0.929 | 10 | 268 |
| 5e25-assembly2.cif.gz_B-2 | crystal structure of branched-chain aminotransferase from thermophilic archaea geoglobus acetivorans complexed with alpha-ketoglutarate | 0.9284 | 1 | 274 |
| 5cm0-assembly1.cif.gz_C-2 | crystal structure of branched-chain aminotransferase from thermophilic archaea geoglobus acetivorans | 0.9193 | 1 | 274 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 6gkrB02 | Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 | 0.9375 | 123 | 272 | 3.20.10.10 |
| 6h65B02 | Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 | 0.9338 | 123 | 273 | 3.20.10.10 |
| 5mr0A02 | Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 | 0.9326 | 123 | 271 | 3.20.10.10 |
| 3lulA02 | Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 | 0.926 | 116 | 269 | 3.20.10.10 |
| af_P0AB80_137_302_3.30.470.10 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.9231 | 123 | 272 | 3.30.470.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7K2NJH4-F1-model_v4 | aminodeoxychorismate lyase (EC 4.1.3.38) | 0.9804 | 1 | 276 |
GO:0005829
GO:0008652 GO:0008696 GO:0009082 GO:0030170 GO:0046656 |
| AF-D9XUP4-F1-model_v4 | Aminotransferase | 0.9797 | 85 | 276 |
GO:0005829
GO:0008483 GO:0008652 GO:0009082 |
| AF-A0A1Q5PU85-F1-model_v4 | 4-amino-4-deoxychorismate lyase | 0.9789 | 2 | 222 |
GO:0003824
GO:0005829 GO:0008652 GO:0009082 |
| AF-A0A367YZJ3-F1-model_v4 | aminodeoxychorismate lyase (EC 4.1.3.38) | 0.978 | 2 | 276 |
GO:0005829
GO:0008652 GO:0008696 GO:0009082 GO:0030170 GO:0046656 |
| AF-A0A7K2NJH4-F1-model_v4 | aminodeoxychorismate lyase (EC 4.1.3.38) | 0.9768 | 1 | 276 |
GO:0005829
GO:0008652 GO:0008696 GO:0009082 GO:0030170 GO:0046656 |