F361918

General Info

Members Datasets Scaffolds Average Seq Length
250 182 500 326

Family's Representative Sequence

Representative Sequence 3300048929|Ga0496126_0036770|Ga0496126_0036770_74_1162
Length 362
Sequence MDPFEGETVAASGTNRSGGDFAIEGEMERLRPSLTGYCYRMLGSGFEAEDATQETLLRAWRRSDTLADRAALKSWLFSIATNVCLDQIDARKRRARPVDLGDPGTAVTEVGAPLPETTWVLPIASGQVADPDADPADQAAQSETLRLAFVAALQHLPARQRVVLVLREVLRWSAKEVADVLETSVASVNSALQRARATLDELDLADAEAPTRPSTEDEQRLLDQYLKAFAEYDIDRIVALLRYDVVFDMPPLPLWIVGPEEVGTFMLGQGAACRGSKLIATSANGHPAYAGYKPDPESGAWLPWSVTMLEFGAADGANAPAITGVHNFLAPFMPNLFASFGLPERLEDADPVIGGAVPGARE

Samples

Sample ID Description Type Environment
1 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
61 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
62 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
63 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
64 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
65 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
66 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
67 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
70 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
71 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
72 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
73 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
74 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
75 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
76 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
77 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
78 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
79 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
80 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
83 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
84 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
88 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
89 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
90 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
91 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
92 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
93 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
94 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
95 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
96 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
100 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
101 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
102 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
103 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
104 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
105 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
106 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
107 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
108 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
113 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
114 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
115 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
116 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
117 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
118 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
119 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
120 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
121 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
122 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
127 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
128 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
129 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
130 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
131 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
132 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
133 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
134 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
149 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
165 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
166 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
167 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
168 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
169 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
170 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
171 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
172 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
173 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
174 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
175 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
176 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
177 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
178 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
179 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
180 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
181 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
182 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.8
Metatranscriptomes 0
Isolates 3.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.2
Nodule 0
Rhizoplane 4.8
Rhizosphere 77.6
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496126_0036770 3300048929 Bacteria 4575
2 LJQas_1001431 3300000549 Bacteria 3577
3 Ga0070670_100007445 3300005331 Bacteria 9296
4 Ga0070671_100000191 3300005355 Bacteria 41284
5 Ga0070709_10012461 3300005434 Bacteria 4760
6 Ga0070714_100008472 3300005435 Bacteria 8032
7 Ga0070714_100027095 3300005435 Bacteria 4742
8 Ga0070714_100304063 3300005435 Bacteria 1488
9 Ga0070713_100016051 3300005436 Bacteria 5623
10 Ga0070713_100107267 3300005436 Bacteria 2429
11 Ga0070710_10000082 3300005437 Bacteria 43464
12 Ga0070711_100003937 3300005439 Bacteria 8727
13 Ga0070705_100005832 3300005440 Bacteria 6024
14 Ga0070705_100073409 3300005440 Bacteria 2076
15 Ga0070708_100000928 3300005445 Bacteria 22181
16 Ga0070708_100170166 3300005445 Bacteria 2033
17 Ga0070663_100131274 3300005455 Bacteria 1902
18 Ga0070706_100440047 3300005467 Bacteria 1213
19 Ga0070707_100003908 3300005468 Bacteria 14029
20 Ga0070707_100063838 3300005468 Bacteria 3534
21 Ga0070707_100245118 3300005468 Bacteria 1744
22 Ga0070698_100025956 3300005471 Bacteria 6103
23 Ga0070679_100010416 3300005530 Bacteria 8819
24 Ga0070697_100188114 3300005536 Bacteria 1752
25 Ga0068853_100171696 3300005539 Bacteria 1962
26 Ga0070665_100071827 3300005548 Bacteria 3468
27 Ga0068866_10012097 3300005718 Bacteria 3755
28 Ga0068858_100000185 3300005842 Bacteria 66023
29 Ga0068858_100101891 3300005842 Bacteria 2678
30 Ga0081455_10048655 3300005937 Bacteria 3661
31 Ga0081539_10002633 3300005985 Bacteria 24532
32 Ga0081539_10010464 3300005985 Bacteria 7529
33 Ga0070717_10008857 3300006028 Bacteria 7536
34 Ga0075365_10030746 3300006038 Bacteria 3442
35 Ga0075365_10039797 3300006038 Bacteria 3063
36 Ga0075364_10238847 3300006051 Bacteria 1234
37 Ga0070715_10033046 3300006163 Bacteria 2112
38 Ga0070716_100013245 3300006173 Bacteria 4199
39 Ga0070712_100017389 3300006175 Bacteria 4656
40 Ga0075428_100082855 3300006844 Bacteria 3500
41 Ga0075431_100045795 3300006847 Bacteria 4509
42 Ga0075433_10061482 3300006852 Bacteria 3290
43 Ga0075434_100015573 3300006871 Bacteria 7297
44 Ga0068865_100000017 3300006881 Bacteria 109636
45 Ga0075436_100146611 3300006914 Bacteria 1660
46 Ga0111539_10212222 3300009094 Bacteria 2255
47 Ga0105247_10012371 3300009101 Bacteria 5124
48 Ga0114129_10596281 3300009147 Bacteria 1432
49 Ga0105239_10025549 3300010375 Bacteria 6501
50 Ga0213876_10090833 3300021384 Bacteria 1617
51 Ga0207692_10000087 3300025898 Bacteria 27051
52 Ga0207710_10000353 3300025900 Bacteria 32989
53 Ga0207685_10018036 3300025905 Bacteria 2296
54 Ga0207699_10016314 3300025906 Bacteria 3883
55 Ga0207684_10008921 3300025910 Bacteria 8897
56 Ga0207684_10029976 3300025910 Bacteria 4632
57 Ga0207693_10012176 3300025915 Bacteria 6948
58 Ga0207663_10057513 3300025916 Bacteria 2450
59 Ga0207652_10041199 3300025921 Bacteria 3925
60 Ga0207646_10001500 3300025922 Bacteria 28687
61 Ga0207646_10086069 3300025922 Bacteria 2811
62 Ga0207646_10113989 3300025922 Bacteria 2427
63 Ga0207650_10016406 3300025925 Bacteria 5177
64 Ga0207700_10022701 3300025928 Bacteria 4309
65 Ga0207700_10030814 3300025928 Bacteria 3803
66 Ga0207664_10007356 3300025929 Bacteria 7631
67 Ga0207664_10015918 3300025929 Bacteria 5477
68 Ga0207664_10268432 3300025929 Bacteria 1494
69 Ga0207704_10000025 3300025938 Bacteria 135523
70 Ga0207665_10003046 3300025939 Bacteria 11249
71 Ga0207658_10036376 3300025986 Bacteria 3529
72 Ga0207703_10000025 3300026035 Bacteria 214692
73 Ga0207703_10011134 3300026035 Bacteria 7004
74 Ga0207639_10127392 3300026041 Bacteria 2102
75 Ga0207678_10008526 3300026067 Bacteria 9032
76 Ga0268266_10000190 3300028379 Bacteria 107630
77 Ga0307515_10133795 3300028794 Bacteria 2711
78 Ga0314311_1014848 3300030733 Bacteria 1108
79 Ga0307408_100118905 3300031548 Bacteria 2044
80 Ga0307405_10019234 3300031731 Bacteria 3788
81 Ga0307413_10061555 3300031824 Bacteria 2317
82 Ga0307410_10008735 3300031852 Bacteria 5638
83 Ga0307410_10033133 3300031852 Bacteria 3333
84 Ga0307407_10024791 3300031903 Bacteria 3151
85 Ga0307409_100004109 3300031995 Bacteria 8103
86 Ga0307409_100055191 3300031995 Bacteria 3065
87 Ga0307416_100001302 3300032002 Bacteria 13467
88 Ga0307416_100011306 3300032002 Bacteria 5941
89 Ga0307411_10184375 3300032005 Bacteria 1587
90 Ga0307411_10343886 3300032005 Bacteria 1213
91 Ga0307415_100000102 3300032126 Bacteria 35964
92 Ga0307415_100065020 3300032126 Bacteria 2540
93 Ga0373928_0005534 3300035084 Bacteria 2416
94 Ga0373932_0000149 3300035112 Bacteria 19976
95 Ga0373945_0026640 3300035116 Bacteria 2015
96 Ga0373953_0048471 3300035117 Bacteria 1711
97 Ga0373956_0164351 3300035119 Bacteria 1046
98 Ga0373957_0001151 3300035120 Bacteria 7019
99 Ga0373946_0121863 3300035171 Bacteria 1191
100 Ga0373955_0016048 3300035172 Bacteria 3679
101 Ga0373931_0000005 3300035691 Bacteria 480485
102 Ga0373935_0101533 3300035692 Bacteria 1897
103 Ga0373935_0191924 3300035692 Bacteria 1407
104 Ga0373925_0041539 3300037068 Bacteria 3409
105 Ga0373925_0141811 3300037068 Bacteria 1881
106 Ga0395899_0011083 3300037312 Bacteria 6905
107 Ga0395900_0041019 3300037418 Bacteria 4772
108 Ga0395898_0029072 3300037466 Bacteria 5538
109 Ga0395905_0010528 3300037471 Bacteria 8984
110 Ga0436365_0694005 3300039437 Bacteria 12947
111 Ga0436365_0881234 3300039437 Bacteria 1818
112 Ga0436363_0766042 3300039450 Bacteria 1763
113 Ga0451791_0026049 3300041451 Bacteria 3258
114 Ga0451791_0752800 3300041451 Bacteria 2360
115 Ga0451793_0126925 3300041452 Bacteria 1393
116 Ga0451797_1310820 3300041453 Bacteria 1379
117 Ga0451841_1241334 3300041498 Bacteria 2259
118 Ga0451843_1021655 3300041509 Bacteria 4613
119 Ga0466972_0044266 3300044658 Bacteria 2159
120 Ga0466965_0003146 3300044683 Bacteria 7200
121 Ga0466965_0008820 3300044683 Bacteria 4676
122 Ga0466965_0012100 3300044683 Bacteria 4052
123 Ga0466957_0001748 3300044842 Bacteria 11432
124 Ga0466960_0042790 3300044901 Bacteria 2151
125 Ga0466967_0464314 3300045976 Bacteria 1239
126 Ga0495629_0041719 3300046459 Bacteria 3227
127 Ga0495641_0105662 3300046461 Bacteria 1256
128 Ga0495582_0006279 3300046473 Bacteria 6622
129 Ga0495639_0012473 3300046475 Bacteria 3666
130 Ga0495662_0030281 3300046476 Bacteria 2612
131 Ga0495664_0008601 3300046477 Bacteria 5694
132 Ga0495628_0044273 3300046516 Bacteria 3542
133 Ga0495628_0087301 3300046516 Bacteria 2418
134 Ga0495630_0288667 3300046517 Bacteria 1253
135 Ga0495632_0060243 3300046519 Bacteria 1845
136 Ga0495665_0027311 3300046531 Bacteria 3063
137 Ga0495586_0126182 3300046535 Bacteria 1431
138 Ga0495645_0005220 3300046543 Bacteria 8899
139 Ga0495645_0006239 3300046543 Bacteria 8258
140 Ga0495645_0020066 3300046543 Bacteria 4818
141 Ga0495645_0086578 3300046543 Bacteria 2242
142 Ga0495634_0085688 3300046642 Bacteria 2053
143 Ga0495625_0000020 3300046660 Bacteria 290440
144 Ga0495657_0037845 3300046675 Bacteria 3322
145 Ga0495599_0078192 3300046678 Bacteria 2065
146 Ga0495646_0152440 3300046680 Bacteria 1284
147 Ga0495624_0008610 3300046690 Bacteria 7104
148 Ga0495581_0016697 3300047315 Bacteria 4267
149 Ga0495680_0164250 3300047322 Bacteria 1610
150 Ga0495593_0008347 3300047673 Bacteria 6027
151 Ga0495614_0198312 3300048089 Bacteria 907
152 Ga0496101_0097015 3300048904 Bacteria 2201
153 Ga0496102_0083650 3300048905 Bacteria 2944
154 Ga0496103_0013677 3300048906 Bacteria 4815
155 Ga0496103_0169236 3300048906 Bacteria 1403
156 Ga0496104_0004757 3300048907 Bacteria 11823
157 Ga0496105_0001165 3300048908 Bacteria 18314
158 Ga0496105_0152637 3300048908 Bacteria 1898
159 Ga0496113_0044036 3300048916 Bacteria 3305
160 Ga0496116_0003502 3300048919 Bacteria 15454
161 Ga0496117_0022595 3300048920 Bacteria 5040
162 Ga0496117_0024503 3300048920 Bacteria 4771
163 Ga0496117_0026985 3300048920 Bacteria 4484
164 Ga0496118_0000971 3300048921 Bacteria 44781
165 Ga0496118_0013552 3300048921 Bacteria 7698
166 Ga0496118_0122835 3300048921 Bacteria 1688
167 Ga0496119_0002332 3300048922 Bacteria 20909
168 Ga0496119_0008846 3300048922 Bacteria 8756
169 Ga0496119_0011866 3300048922 Bacteria 7153
170 Ga0496119_0019827 3300048922 Bacteria 4930
171 Ga0496120_0003862 3300048923 Bacteria 13153
172 Ga0496121_0002115 3300048924 Bacteria 31208
173 Ga0496121_0012191 3300048924 Bacteria 9424
174 Ga0496121_0063437 3300048924 Bacteria 3019
175 Ga0496121_0063726 3300048924 Bacteria 3009
176 Ga0496124_0091001 3300048927 Bacteria 2487
177 Ga0496125_0024894 3300048928 Bacteria 5493
178 Ga0496125_0042941 3300048928 Bacteria 3844
179 Ga0496126_0013919 3300048929 Bacteria 8161
180 Ga0496126_0064134 3300048929 Bacteria 3292
181 Ga0496126_0223191 3300048929 Bacteria 1582
182 Ga0496126_0234305 3300048929 Bacteria 1537
183 Ga0501031_0004889 3300049568 Bacteria 8710
184 Ga0501032_0005984 3300049569 Bacteria 8973
185 Ga0501032_0151278 3300049569 Bacteria 1526
186 Ga0501033_0006951 3300049570 Bacteria 8833
187 Ga0501034_0015213 3300049571 Bacteria 7908
188 Ga0501034_0103917 3300049571 Bacteria 2834
189 Ga0501034_0137528 3300049571 Bacteria 2423
190 Ga0501034_0141898 3300049571 Bacteria 2381
191 Ga0501036_0007911 3300049572 Bacteria 8698
192 Ga0501037_0006109 3300049573 Bacteria 8798
193 Ga0501038_0010116 3300049574 Bacteria 8635
194 Ga0501039_0168215 3300049575 Bacteria 1723
195 Ga0501040_0016038 3300049576 Bacteria 4954
196 Ga0501042_0057306 3300049578 Bacteria 2780
197 Ga0501042_0061329 3300049578 Bacteria 2687
198 Ga0501043_0007521 3300049579 Bacteria 8647
199 Ga0501046_0002173 3300049580 Bacteria 18524
200 Ga0501047_0005887 3300049581 Bacteria 11538
201 Ga0501047_0007663 3300049581 Bacteria 10168
202 Ga0501047_0009793 3300049581 Bacteria 9055
203 Ga0501047_0051487 3300049581 Bacteria 3979
204 Ga0501048_0006626 3300049582 Bacteria 8802
205 Ga0501068_0005688 3300049584 Bacteria 6825
206 Ga0501069_0000034 3300049585 Bacteria 92080
207 Ga0501069_0002898 3300049585 Bacteria 8809
208 Ga0501070_0000013 3300049586 Bacteria 180554
209 Ga0501070_0000577 3300049586 Bacteria 33431
210 Ga0501070_0025832 3300049586 Bacteria 4927
211 Ga0501070_0044764 3300049586 Bacteria 3681
212 Ga0501071_0009340 3300049587 Bacteria 6528
213 Ga0501073_0006837 3300049589 Bacteria 8479
214 Ga0501074_0005930 3300049590 Bacteria 8809
215 Ga0501076_0009532 3300049592 Bacteria 7169
216 Ga0501079_0006845 3300049741 Bacteria 8583
217 Ga0501080_0012429 3300049742 Bacteria 7805
218 Ga0501080_0062872 3300049742 Bacteria 3455
219 Ga0501083_0004395 3300049744 Bacteria 9940
220 Ga0501083_0006084 3300049744 Bacteria 8550
221 Ga0501035_0000642 3300049822 Bacteria 38504
222 Ga0501035_0155750 3300049822 Bacteria 1980
223 Ga0501044_0000527 3300049823 Bacteria 46627
224 Ga0501044_0045483 3300049823 Bacteria 4547
225 Ga0501044_0383650 3300049823 Bacteria 1320
226 Ga0501045_0007679 3300049824 Bacteria 7501
227 nmdc:mga00v17_16385_c1 3300050491 Bacteria 4177
228 nmdc:mga00v17_183969_c1 3300050491 Bacteria 1348
229 nmdc:mga0yw44_250472_c1 3300050492 Bacteria 1179
230 nmdc:mga06r32_347937_c1 3300050510 Bacteria 1467
231 nmdc:mga0rr50_7080_c1 3300050513 Bacteria 5046
232 nmdc:mga08x19_11979_c1 3300050514 Bacteria 5219
233 nmdc:mga0a205_270357_c1 3300050515 Bacteria 1577
234 Ga0495601_0020967 3300053077 Bacteria 3996
235 Ga0495612_0010859 3300053078 Bacteria 3680
236 Ga0495612_0024210 3300053078 Bacteria 2437
237 Ga0495595_0005029 3300053084 Bacteria 5340
238 Ga0495619_0021258 3300053085 Bacteria 4140
239 Ga0500573_0145599 3300053140 Bacteria 1301
240 Ga0500616_0001972 3300053153 Bacteria 18246
241 Ga0501082_0009000 3300060353 Bacteria 8614
242 Ga0466962_0048986 3300061719 Bacteria 2019
243 2515857067 2515154155 Bacteria 7985436
244 2791915362 2791354901 Bacteria 8322202
245 2866613808 2866612099 Bacteria 7543886
246 2884695030 2884693830 Bacteria 11273186
247 2895431595 2895427314 Bacteria 13147766
248 2895446286 2895442618 Bacteria 11027144
249 3003006446 3002998708 Bacteria 11715108
250 8053952925 8053945823 Bacteria 8962862
251 Ga0496126_0036770
252 LJQas_1001431
253 Ga0070670_100007445
254 Ga0070671_100000191
255 Ga0070709_10012461
256 Ga0070714_100008472
257 Ga0070714_100027095
258 Ga0070714_100304063
259 Ga0070713_100016051
260 Ga0070713_100107267
261 Ga0070710_10000082
262 Ga0070711_100003937
263 Ga0070705_100005832
264 Ga0070705_100073409
265 Ga0070708_100000928
266 Ga0070708_100170166
267 Ga0070663_100131274
268 Ga0070706_100440047
269 Ga0070707_100003908
270 Ga0070707_100063838
271 Ga0070707_100245118
272 Ga0070698_100025956
273 Ga0070679_100010416
274 Ga0070697_100188114
275 Ga0068853_100171696
276 Ga0070665_100071827
277 Ga0068866_10012097
278 Ga0068858_100000185
279 Ga0068858_100101891
280 Ga0081455_10048655
281 Ga0081539_10002633
282 Ga0081539_10010464
283 Ga0070717_10008857
284 Ga0075365_10030746
285 Ga0075365_10039797
286 Ga0075364_10238847
287 Ga0070715_10033046
288 Ga0070716_100013245
289 Ga0070712_100017389
290 Ga0075428_100082855
291 Ga0075431_100045795
292 Ga0075433_10061482
293 Ga0075434_100015573
294 Ga0068865_100000017
295 Ga0075436_100146611
296 Ga0111539_10212222
297 Ga0105247_10012371
298 Ga0114129_10596281
299 Ga0105239_10025549
300 Ga0213876_10090833
301 Ga0207692_10000087
302 Ga0207710_10000353
303 Ga0207685_10018036
304 Ga0207699_10016314
305 Ga0207684_10008921
306 Ga0207684_10029976
307 Ga0207693_10012176
308 Ga0207663_10057513
309 Ga0207652_10041199
310 Ga0207646_10001500
311 Ga0207646_10086069
312 Ga0207646_10113989
313 Ga0207650_10016406
314 Ga0207700_10022701
315 Ga0207700_10030814
316 Ga0207664_10007356
317 Ga0207664_10015918
318 Ga0207664_10268432
319 Ga0207704_10000025
320 Ga0207665_10003046
321 Ga0207658_10036376
322 Ga0207703_10000025
323 Ga0207703_10011134
324 Ga0207639_10127392
325 Ga0207678_10008526
326 Ga0268266_10000190
327 Ga0307515_10133795
328 Ga0314311_1014848
329 Ga0307408_100118905
330 Ga0307405_10019234
331 Ga0307413_10061555
332 Ga0307410_10008735
333 Ga0307410_10033133
334 Ga0307407_10024791
335 Ga0307409_100004109
336 Ga0307409_100055191
337 Ga0307416_100001302
338 Ga0307416_100011306
339 Ga0307411_10184375
340 Ga0307411_10343886
341 Ga0307415_100000102
342 Ga0307415_100065020
343 Ga0373928_0005534
344 Ga0373932_0000149
345 Ga0373945_0026640
346 Ga0373953_0048471
347 Ga0373956_0164351
348 Ga0373957_0001151
349 Ga0373946_0121863
350 Ga0373955_0016048
351 Ga0373931_0000005
352 Ga0373935_0101533
353 Ga0373935_0191924
354 Ga0373925_0041539
355 Ga0373925_0141811
356 Ga0395899_0011083
357 Ga0395900_0041019
358 Ga0395898_0029072
359 Ga0395905_0010528
360 Ga0436365_0694005
361 Ga0436365_0881234
362 Ga0436363_0766042
363 Ga0451791_0026049
364 Ga0451791_0752800
365 Ga0451793_0126925
366 Ga0451797_1310820
367 Ga0451841_1241334
368 Ga0451843_1021655
369 Ga0466972_0044266
370 Ga0466965_0003146
371 Ga0466965_0008820
372 Ga0466965_0012100
373 Ga0466957_0001748
374 Ga0466960_0042790
375 Ga0466967_0464314
376 Ga0495629_0041719
377 Ga0495641_0105662
378 Ga0495582_0006279
379 Ga0495639_0012473
380 Ga0495662_0030281
381 Ga0495664_0008601
382 Ga0495628_0044273
383 Ga0495628_0087301
384 Ga0495630_0288667
385 Ga0495632_0060243
386 Ga0495665_0027311
387 Ga0495586_0126182
388 Ga0495645_0005220
389 Ga0495645_0006239
390 Ga0495645_0020066
391 Ga0495645_0086578
392 Ga0495634_0085688
393 Ga0495625_0000020
394 Ga0495657_0037845
395 Ga0495599_0078192
396 Ga0495646_0152440
397 Ga0495624_0008610
398 Ga0495581_0016697
399 Ga0495680_0164250
400 Ga0495593_0008347
401 Ga0495614_0198312
402 Ga0496101_0097015
403 Ga0496102_0083650
404 Ga0496103_0013677
405 Ga0496103_0169236
406 Ga0496104_0004757
407 Ga0496105_0001165
408 Ga0496105_0152637
409 Ga0496113_0044036
410 Ga0496116_0003502
411 Ga0496117_0022595
412 Ga0496117_0024503
413 Ga0496117_0026985
414 Ga0496118_0000971
415 Ga0496118_0013552
416 Ga0496118_0122835
417 Ga0496119_0002332
418 Ga0496119_0008846
419 Ga0496119_0011866
420 Ga0496119_0019827
421 Ga0496120_0003862
422 Ga0496121_0002115
423 Ga0496121_0012191
424 Ga0496121_0063437
425 Ga0496121_0063726
426 Ga0496124_0091001
427 Ga0496125_0024894
428 Ga0496125_0042941
429 Ga0496126_0013919
430 Ga0496126_0064134
431 Ga0496126_0223191
432 Ga0496126_0234305
433 Ga0501031_0004889
434 Ga0501032_0005984
435 Ga0501032_0151278
436 Ga0501033_0006951
437 Ga0501034_0015213
438 Ga0501034_0103917
439 Ga0501034_0137528
440 Ga0501034_0141898
441 Ga0501036_0007911
442 Ga0501037_0006109
443 Ga0501038_0010116
444 Ga0501039_0168215
445 Ga0501040_0016038
446 Ga0501042_0057306
447 Ga0501042_0061329
448 Ga0501043_0007521
449 Ga0501046_0002173
450 Ga0501047_0005887
451 Ga0501047_0007663
452 Ga0501047_0009793
453 Ga0501047_0051487
454 Ga0501048_0006626
455 Ga0501068_0005688
456 Ga0501069_0000034
457 Ga0501069_0002898
458 Ga0501070_0000013
459 Ga0501070_0000577
460 Ga0501070_0025832
461 Ga0501070_0044764
462 Ga0501071_0009340
463 Ga0501073_0006837
464 Ga0501074_0005930
465 Ga0501076_0009532
466 Ga0501079_0006845
467 Ga0501080_0012429
468 Ga0501080_0062872
469 Ga0501083_0004395
470 Ga0501083_0006084
471 Ga0501035_0000642
472 Ga0501035_0155750
473 Ga0501044_0000527
474 Ga0501044_0045483
475 Ga0501044_0383650
476 Ga0501045_0007679
477 nmdc:mga00v17_16385_c1
478 nmdc:mga00v17_183969_c1
479 nmdc:mga0yw44_250472_c1
480 nmdc:mga06r32_347937_c1
481 nmdc:mga0rr50_7080_c1
482 nmdc:mga08x19_11979_c1
483 nmdc:mga0a205_270357_c1
484 Ga0495601_0020967
485 Ga0495612_0010859
486 Ga0495612_0024210
487 Ga0495595_0005029
488 Ga0495619_0021258
489 Ga0500573_0145599
490 Ga0500616_0001972
491 Ga0501082_0009000
492 Ga0466962_0048986
493 2515857067
494 2791915362
495 2866613808
496 2884695030
497 2895431595
498 2895446286
499 3003006446
500 8053952925

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04542

Sigma70_r2

Sigma-70 region 2

27

94

0.96

PF08281

Sigma70_r4_2

Sigma-70, region 4

146

199

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o8x-assembly1.cif.gz_A "crystal structure of the ""-35 element"" promoter recognition domain of mycobacterium tuberculosis sigc" 0.9864 149 192
1h3l-assembly1.cif.gz_A n-terminal fragment of sigr from streptomyces coelicolor 0.9226 9 75
6jhe-assembly1.cif.gz_A crystal structure of bacillus subtilis sigw domain 4 in complexed with -35 element dna 0.908 149 199
1ku3-assembly1.cif.gz_A crystal structure of thermus aquaticus rna polymerase sigma subunit fragment, region 4 0.9058 144 194
6jhe-assembly1.cif.gz_A crystal structure of bacillus subtilis sigw domain 4 in complexed with -35 element dna 0.8447 149 199
ID Description Score Start End Superfamily
2o8xA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9864 149 192 1.10.10.10
4go1B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.936 151 190 1.10.10.10
1h3lA00 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9226 9 75 1.10.1740.10
af_P52106_149_214_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9083 149 193 1.10.10.10
1ku3A00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9058 144 194 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7W0QG17-F1-model_v4 Nuclear transport factor 2 family protein 0.9318 205 339
AF-D3F7P6-F1-model_v4 RNA polymerase, sigma-24 subunit, ECF subfamily 0.9307 1 341 GO:0003677
GO:0006352
GO:0016987
AF-D3F7P6-F1-model_v4 RNA polymerase, sigma-24 subunit, ECF subfamily 0.928 1 341 GO:0003677
GO:0006352
GO:0016987
AF-A0A1A9AB16-F1-model_v4 RNA polymerase sigma-70 factor, ECF subfamily 0.9183 18 341 GO:0003677
GO:0006352
GO:0016987
AF-A0A7W0QG17-F1-model_v4 Nuclear transport factor 2 family protein 0.9176 205 339

Map