F361560

General Info

Members Datasets Scaffolds Average Seq Length
250 133 500 387

Family's Representative Sequence

Representative Sequence 3300013105|Ga0157369_10007522|Ga0157369_100075228
Length 425
Sequence VEPAASAAETSRVGGSEHGGERMTTGALAERIPGDATAAKFAGTAGIAAAVLGYWLTLPPVTLTSHAVPVVFAVAAAACGAYAIVNGHRRLGWGAVAAAVLTLALGLLAEQAGRGNLHTAVVWGPLVASMFVYATPLTYAAMGGLYSERSGVVNIGLEGMMLTGAFFGIWGAVETGSWVLGLLIAMASGGVLAFIYAVFAIHLRSDQIVGGTAINFLALGITGYLFIDIYGSNGTPGMNNAEQIPNLSISSSNSFFGQGFGDLNLLVWVSFALLILTYLFVFRTPFGLRLRAVGEHPRAADTVGISVFKVRYAAVTFSGMLSAMGGAFLSIGFVHSFNQNMTEGRGFIALAALIFGKWRPGGAFAAALLFGFSSALAQRLAAIPNWATYAVLFQALPYVLTLVAVAGVIGRSIPPAADGQPYQKQ

Samples

Sample ID Description Type Environment
1 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
48 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
49 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
72 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
73 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
74 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
75 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
76 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
79 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
80 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
81 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
82 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
83 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
84 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
88 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
92 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
93 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
94 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
95 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
96 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
97 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
100 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
101 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
102 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
103 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
104 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
105 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
106 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
107 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
108 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
109 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
110 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
111 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
122 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
123 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
124 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
125 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
126 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
127 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
128 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
129 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
130 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
131 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
132 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
133 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.4
Metatranscriptomes 1.6
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 13.2
Rhizosphere 83.2
Stem 0
Stem Tuber 0
Unclassified 1.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157369_10007522 3300013105 Bacteria 12539
2 Ga0070683_100087282 3300005329 Bacteria 2925
3 Ga0070683_100110144 3300005329 Bacteria 2597
4 Ga0068868_100009704 3300005338 Bacteria 6943
5 Ga0070675_100077544 3300005354 Bacteria 2766
6 Ga0070675_100198532 3300005354 Bacteria 1740
7 Ga0070674_100006053 3300005356 Bacteria 7037
8 Ga0070709_10030663 3300005434 Bacteria 3229
9 Ga0070714_100001347 3300005435 Bacteria 17769
10 Ga0070714_100034210 3300005435 Bacteria 4254
11 Ga0070714_100046627 3300005435 Bacteria 3678
12 Ga0070714_100056605 3300005435 Bacteria 3354
13 Ga0070713_100025228 3300005436 Bacteria 4644
14 Ga0070713_100052474 3300005436 Bacteria 3376
15 Ga0070713_100116947 3300005436 Bacteria 2333
16 Ga0070710_10067009 3300005437 Bacteria 2059
17 Ga0070711_100003869 3300005439 Bacteria 8790
18 Ga0070678_100113441 3300005456 Bacteria 2124
19 Ga0070681_10289845 3300005458 Bacteria 1547
20 Ga0070706_100120507 3300005467 Bacteria 2445
21 Ga0070707_100143859 3300005468 Bacteria 2321
22 Ga0070698_100003923 3300005471 Bacteria 16353
23 Ga0070698_100095835 3300005471 Bacteria 2944
24 Ga0070699_100080519 3300005518 Bacteria 2838
25 Ga0070679_100117913 3300005530 Bacteria 2639
26 Ga0070684_100025156 3300005535 Bacteria 5001
27 Ga0070696_100017806 3300005546 Bacteria 4796
28 Ga0068855_100046427 3300005563 Bacteria 5134
29 Ga0068855_100141550 3300005563 Bacteria 2741
30 Ga0068854_100033842 3300005578 Bacteria 3564
31 Ga0070702_100056391 3300005615 Bacteria 2269
32 Ga0068861_100080326 3300005719 Unclassified 2551
33 Ga0068851_10011038 3300005834 Bacteria 4228
34 Ga0068870_10115817 3300005840 Unclassified 1537
35 Ga0081539_10000041 3300005985 Bacteria 292660
36 Ga0081539_10004282 3300005985 Bacteria 16008
37 Ga0070717_10101336 3300006028 Bacteria 2445
38 Ga0075432_10014577 3300006058 Bacteria 2677
39 Ga0070716_100014865 3300006173 Bacteria 3992
40 Ga0070716_100029187 3300006173 Bacteria 2979
41 Ga0070712_100014356 3300006175 Bacteria 5084
42 Ga0070712_100020407 3300006175 Bacteria 4335
43 Ga0070712_100028981 3300006175 Bacteria 3709
44 Ga0070712_100038294 3300006175 Bacteria 3276
45 Ga0070712_100146596 3300006175 Bacteria 1807
46 Ga0075428_100013093 3300006844 Bacteria 9224
47 Ga0075428_100087633 3300006844 Bacteria 3396
48 Ga0075433_10011525 3300006852 Bacteria 7120
49 Ga0075433_10013323 3300006852 Bacteria 6681
50 Ga0075434_100010636 3300006871 Bacteria 8634
51 Ga0075434_100065233 3300006871 Bacteria 3626
52 Ga0075436_100013210 3300006914 Bacteria 5659
53 Ga0075436_100014557 3300006914 Bacteria 5390
54 Ga0075436_100128888 3300006914 Bacteria 1773
55 Ga0075435_100006408 3300007076 Bacteria 8319
56 Ga0075435_100072423 3300007076 Bacteria 2815
57 Ga0105240_10036543 3300009093 Bacteria 6316
58 Ga0111539_10024188 3300009094 Bacteria 7458
59 Ga0114129_10024902 3300009147 Bacteria 8485
60 Ga0114129_10051926 3300009147 Bacteria 5754
61 Ga0114129_10086054 3300009147 Bacteria 4360
62 Ga0114129_10125094 3300009147 Bacteria 3536
63 Ga0114129_10194196 3300009147 Bacteria 2754
64 Ga0114129_10312918 3300009147 Bacteria 2089
65 Ga0105241_10079712 3300009174 Bacteria 2561
66 Ga0105242_10041851 3300009176 Bacteria 3697
67 Ga0105238_10176084 3300009551 Bacteria 2116
68 Ga0157369_10007529 3300013105 Bacteria 12531
69 Ga0157369_10038158 3300013105 Bacteria 5254
70 Ga0157369_10077000 3300013105 Bacteria 3575
71 Ga0157374_10160658 3300013296 Bacteria 2188
72 Ga0157372_10081130 3300013307 Bacteria 3671
73 Ga0157372_10157976 3300013307 Bacteria 2619
74 Ga0157372_10461708 3300013307 Bacteria 1480
75 Ga0206356_10376272 3300020070 Bacteria 2131
76 Ga0206354_10378757 3300020081 Bacteria 2717
77 Ga0206353_11334841 3300020082 Bacteria 2261
78 Ga0213873_10004751 3300021358 Bacteria 2559
79 Ga0213874_10019291 3300021377 Bacteria 1854
80 Ga0224712_10014403 3300022467 Bacteria 2545
81 Ga0207653_10000863 3300025885 Bacteria 10095
82 Ga0207692_10061493 3300025898 Bacteria 1946
83 Ga0207699_10025706 3300025906 Bacteria 3236
84 Ga0207699_10040507 3300025906 Bacteria 2684
85 Ga0207707_10086728 3300025912 Bacteria 2735
86 Ga0207693_10005824 3300025915 Bacteria 10229
87 Ga0207693_10008140 3300025915 Bacteria 8591
88 Ga0207693_10108072 3300025915 Bacteria 2182
89 Ga0207663_10025631 3300025916 Bacteria 3412
90 Ga0207663_10090718 3300025916 Bacteria 2027
91 Ga0207652_10032183 3300025921 Bacteria 4406
92 Ga0207652_10173452 3300025921 Bacteria 1936
93 Ga0207700_10000006 3300025928 Bacteria 348187
94 Ga0207700_10049646 3300025928 Bacteria 3122
95 Ga0207664_10000860 3300025929 Bacteria 20550
96 Ga0207664_10009587 3300025929 Bacteria 6802
97 Ga0207664_10027106 3300025929 Bacteria 4339
98 Ga0207664_10036415 3300025929 Bacteria 3804
99 Ga0207664_10092883 3300025929 Bacteria 2477
100 Ga0207664_10157146 3300025929 Bacteria 1937
101 Ga0207669_10079936 3300025937 Unclassified 2089
102 Ga0207704_10036462 3300025938 Bacteria 2830
103 Ga0207665_10006489 3300025939 Bacteria 7755
104 Ga0207665_10020270 3300025939 Bacteria 4368
105 Ga0207661_10008370 3300025944 Bacteria 7388
106 Ga0207667_10061057 3300025949 Bacteria 3944
107 Ga0207640_10035852 3300025981 Bacteria 3108
108 Ga0207677_10008001 3300026023 Bacteria 5882
109 Ga0207639_10025824 3300026041 Bacteria 4262
110 Ga0207702_10095445 3300026078 Bacteria 2613
111 Ga0207675_100088249 3300026118 Bacteria 2913
112 Ga0207683_10023935 3300026121 Bacteria 5254
113 Ga0207698_10121539 3300026142 Bacteria 2211
114 Ga0207428_10185686 3300027907 Bacteria 1569
115 Ga0265319_1003767 3300028563 Bacteria 7776
116 Ga0265318_10001805 3300028577 Bacteria 12170
117 Ga0265338_10022811 3300028800 Bacteria 6461
118 Ga0265338_10064815 3300028800 Bacteria 3174
119 Ga0265340_10047222 3300031247 Bacteria 2098
120 Ga0265327_10009113 3300031251 Bacteria 7227
121 Ga0265327_10049370 3300031251 Bacteria 2207
122 Ga0307406_10071516 3300031901 Bacteria 2274
123 Ga0373930_0003789 3300034816 Bacteria 2424
124 Ga0373949_0005567 3300035090 Bacteria 2808
125 Ga0373952_0001244 3300035092 Bacteria 4641
126 Ga0373961_0003182 3300035241 Bacteria 4096
127 Ga0373931_0038028 3300035691 Bacteria 2515
128 Ga0373937_0074043 3300036401 Bacteria 3142
129 Ga0395899_0003434 3300037312 Bacteria 12562
130 Ga0395899_0007799 3300037312 Bacteria 8255
131 Ga0395899_0044715 3300037312 Bacteria 3299
132 Ga0395899_0117557 3300037312 Bacteria 1907
133 Ga0395900_0015290 3300037418 Bacteria 7825
134 Ga0395900_0017204 3300037418 Bacteria 7378
135 Ga0395900_0018382 3300037418 Bacteria 7129
136 Ga0395900_0035719 3300037418 Bacteria 5120
137 Ga0395900_0101270 3300037418 Unclassified 2958
138 Ga0395900_0343269 3300037418 Bacteria 1468
139 Ga0395898_0003946 3300037466 Bacteria 16357
140 Ga0395898_0033937 3300037466 Bacteria 5089
141 Ga0395898_0052154 3300037466 Bacteria 3996
142 Ga0395898_0075427 3300037466 Bacteria 3257
143 Ga0395898_0121835 3300037466 Bacteria 2499
144 Ga0395898_0135777 3300037466 Bacteria 2355
145 Ga0395898_0161898 3300037466 Bacteria 2140
146 Ga0395898_0164457 3300037466 Bacteria 2122
147 Ga0395898_0296133 3300037466 Bacteria 1543
148 Ga0395905_0019049 3300037471 Bacteria 6509
149 Ga0395905_0045593 3300037471 Bacteria 4112
150 Ga0395905_0077335 3300037471 Bacteria 3118
151 Ga0436364_0002718 3300037853 Bacteria 5249
152 Ga0436364_0572762 3300037853 Bacteria 2908
153 Ga0436364_1260201 3300037853 Bacteria 29416
154 Ga0395901_0011891 3300038443 Bacteria 8828
155 Ga0395901_0013639 3300038443 Bacteria 8263
156 Ga0395901_0015687 3300038443 Bacteria 7717
157 Ga0395901_0017208 3300038443 Bacteria 7375
158 Ga0395901_0018152 3300038443 Bacteria 7180
159 Ga0395901_0021961 3300038443 Bacteria 6541
160 Ga0395901_0031859 3300038443 Bacteria 5436
161 Ga0395901_0039919 3300038443 Bacteria 4859
162 Ga0395901_0137586 3300038443 Bacteria 2567
163 Ga0395901_0169322 3300038443 Bacteria 2292
164 Ga0395901_0203718 3300038443 Bacteria 2073
165 Ga0395901_0328423 3300038443 Bacteria 1582
166 Ga0436365_0933743 3300039437 Bacteria 12930
167 Ga0436365_1076794 3300039437 Bacteria 40178
168 Ga0436363_0460080 3300039450 Bacteria 11290
169 Ga0436363_1136793 3300039450 Bacteria 2180
170 Ga0436363_1534049 3300039450 Bacteria 3157
171 Ga0436362_0287735 3300039453 Bacteria 3931
172 Ga0466965_0009135 3300044683 Bacteria 4602
173 Ga0466966_0007597 3300044684 Bacteria 7184
174 Ga0466966_0031809 3300044684 Bacteria 3422
175 Ga0466963_0000078 3300044694 Bacteria 33439
176 Ga0466963_0004568 3300044694 Bacteria 8057
177 Ga0466963_0016564 3300044694 Bacteria 4586
178 Ga0466963_0078767 3300044694 Bacteria 2228
179 Ga0466971_0066909 3300044719 Bacteria 1628
180 Ga0466971_0087792 3300044719 Bacteria 1422
181 Ga0466970_0004396 3300044765 Bacteria 6946
182 Ga0466960_0033662 3300044901 Bacteria 2383
183 Ga0466959_0037292 3300045049 Bacteria 3591
184 Ga0466959_0041587 3300045049 Bacteria 3392
185 Ga0466958_0002055 3300045836 Bacteria 9945
186 Ga0466958_0035279 3300045836 Bacteria 2987
187 Ga0466967_0001286 3300045976 Bacteria 14281
188 Ga0466967_0006789 3300045976 Bacteria 8156
189 Ga0466967_0013663 3300045976 Bacteria 6287
190 Ga0466967_0041816 3300045976 Bacteria 3956
191 Ga0466967_0054179 3300045976 Bacteria 3528
192 Ga0466967_0069482 3300045976 Bacteria 3148
193 Ga0466967_0222266 3300045976 Bacteria 1795
194 Ga0466967_0349342 3300045976 Bacteria 1431
195 Ga0495629_0034076 3300046459 Bacteria 3600
196 Ga0495642_0022467 3300046528 Bacteria 2486
197 Ga0495645_0038581 3300046543 Bacteria 3484
198 Ga0495657_0019400 3300046675 Bacteria 4905
199 Ga0495600_0136156 3300046809 Bacteria 1595
200 Ga0495660_0051481 3300046810 Bacteria 2241
201 Ga0495581_0132270 3300047315 Bacteria 1454
202 Ga0495680_0019523 3300047322 Bacteria 5718
203 Ga0495602_0210258 3300048088 Bacteria 1477
204 Ga0496100_0029085 3300048903 Bacteria 3414
205 Ga0496100_0111155 3300048903 Bacteria 1904
206 Ga0496102_0057156 3300048905 Bacteria 3561
207 Ga0496104_0065277 3300048907 Bacteria 3454
208 Ga0496104_0106258 3300048907 Bacteria 2690
209 Ga0496104_0160300 3300048907 Bacteria 2158
210 Ga0496104_0174391 3300048907 Bacteria 2061
211 Ga0496104_0179522 3300048907 Bacteria 2027
212 Ga0496105_0013228 3300048908 Bacteria 6548
213 Ga0496105_0033984 3300048908 Bacteria 4192
214 Ga0496105_0270814 3300048908 Bacteria 1371
215 Ga0496106_0002316 3300048909 Bacteria 14197
216 Ga0496106_0023701 3300048909 Bacteria 4560
217 Ga0496107_0038575 3300048910 Bacteria 3426
218 Ga0496107_0042243 3300048910 Bacteria 3274
219 Ga0496107_0154441 3300048910 Bacteria 1699
220 Ga0496108_0184058 3300048911 Bacteria 1809
221 Ga0496109_0030693 3300048912 Bacteria 4817
222 Ga0496109_0447884 3300048912 Bacteria 1220
223 Ga0496110_0238826 3300048913 Bacteria 1653
224 Ga0496112_0046960 3300048915 Bacteria 4236
225 Ga0496112_0110447 3300048915 Bacteria 2720
226 Ga0496112_0154853 3300048915 Bacteria 2259
227 Ga0496112_0172439 3300048915 Bacteria 2128
228 Ga0496112_0211380 3300048915 Bacteria 1897
229 Ga0496112_0258104 3300048915 Bacteria 1693
230 Ga0496113_0097995 3300048916 Bacteria 2269
231 Ga0496113_0181613 3300048916 Bacteria 1668
232 Ga0496114_0052966 3300048917 Bacteria 3382
233 Ga0496114_0090923 3300048917 Bacteria 2591
234 Ga0496114_0123029 3300048917 Bacteria 2233
235 Ga0496115_0024690 3300048918 Bacteria 4674
236 Ga0496115_0124038 3300048918 Bacteria 2127
237 Ga0501069_0007737 3300049585 Bacteria 5639
238 nmdc:mga05p37_362564_c1 3300050507 Bacteria 1703
239 nmdc:mga08y16_19552_c1 3300050511 Bacteria 7140
240 nmdc:mga0n895_14494_c1 3300050512 Bacteria 7162
241 nmdc:mga0n895_225678_c1 3300050512 Bacteria 1901
242 nmdc:mga0n895_8814_c1 3300050512 Bacteria 8777
243 nmdc:mga0rr50_11847_c1 3300050513 Bacteria 5602
244 nmdc:mga0rr50_13519_c1 3300050513 Bacteria 5318
245 nmdc:mga08x19_1628_c1 3300050514 Bacteria 13900
246 nmdc:mga08x19_35970_c1 3300050514 Bacteria 3135
247 nmdc:mga0a205_56956_c1 3300050515 Bacteria 3774
248 Ga0495601_0195581 3300053077 Bacteria 1322
249 Ga0495595_0029309 3300053084 Bacteria 2462
250 Ga0466962_0000577 3300061719 Bacteria 16135
251 Ga0157369_10007522
252 Ga0070683_100087282
253 Ga0070683_100110144
254 Ga0068868_100009704
255 Ga0070675_100077544
256 Ga0070675_100198532
257 Ga0070674_100006053
258 Ga0070709_10030663
259 Ga0070714_100001347
260 Ga0070714_100034210
261 Ga0070714_100046627
262 Ga0070714_100056605
263 Ga0070713_100025228
264 Ga0070713_100052474
265 Ga0070713_100116947
266 Ga0070710_10067009
267 Ga0070711_100003869
268 Ga0070678_100113441
269 Ga0070681_10289845
270 Ga0070706_100120507
271 Ga0070707_100143859
272 Ga0070698_100003923
273 Ga0070698_100095835
274 Ga0070699_100080519
275 Ga0070679_100117913
276 Ga0070684_100025156
277 Ga0070696_100017806
278 Ga0068855_100046427
279 Ga0068855_100141550
280 Ga0068854_100033842
281 Ga0070702_100056391
282 Ga0068861_100080326
283 Ga0068851_10011038
284 Ga0068870_10115817
285 Ga0081539_10000041
286 Ga0081539_10004282
287 Ga0070717_10101336
288 Ga0075432_10014577
289 Ga0070716_100014865
290 Ga0070716_100029187
291 Ga0070712_100014356
292 Ga0070712_100020407
293 Ga0070712_100028981
294 Ga0070712_100038294
295 Ga0070712_100146596
296 Ga0075428_100013093
297 Ga0075428_100087633
298 Ga0075433_10011525
299 Ga0075433_10013323
300 Ga0075434_100010636
301 Ga0075434_100065233
302 Ga0075436_100013210
303 Ga0075436_100014557
304 Ga0075436_100128888
305 Ga0075435_100006408
306 Ga0075435_100072423
307 Ga0105240_10036543
308 Ga0111539_10024188
309 Ga0114129_10024902
310 Ga0114129_10051926
311 Ga0114129_10086054
312 Ga0114129_10125094
313 Ga0114129_10194196
314 Ga0114129_10312918
315 Ga0105241_10079712
316 Ga0105242_10041851
317 Ga0105238_10176084
318 Ga0157369_10007529
319 Ga0157369_10038158
320 Ga0157369_10077000
321 Ga0157374_10160658
322 Ga0157372_10081130
323 Ga0157372_10157976
324 Ga0157372_10461708
325 Ga0206356_10376272
326 Ga0206354_10378757
327 Ga0206353_11334841
328 Ga0213873_10004751
329 Ga0213874_10019291
330 Ga0224712_10014403
331 Ga0207653_10000863
332 Ga0207692_10061493
333 Ga0207699_10025706
334 Ga0207699_10040507
335 Ga0207707_10086728
336 Ga0207693_10005824
337 Ga0207693_10008140
338 Ga0207693_10108072
339 Ga0207663_10025631
340 Ga0207663_10090718
341 Ga0207652_10032183
342 Ga0207652_10173452
343 Ga0207700_10000006
344 Ga0207700_10049646
345 Ga0207664_10000860
346 Ga0207664_10009587
347 Ga0207664_10027106
348 Ga0207664_10036415
349 Ga0207664_10092883
350 Ga0207664_10157146
351 Ga0207669_10079936
352 Ga0207704_10036462
353 Ga0207665_10006489
354 Ga0207665_10020270
355 Ga0207661_10008370
356 Ga0207667_10061057
357 Ga0207640_10035852
358 Ga0207677_10008001
359 Ga0207639_10025824
360 Ga0207702_10095445
361 Ga0207675_100088249
362 Ga0207683_10023935
363 Ga0207698_10121539
364 Ga0207428_10185686
365 Ga0265319_1003767
366 Ga0265318_10001805
367 Ga0265338_10022811
368 Ga0265338_10064815
369 Ga0265340_10047222
370 Ga0265327_10009113
371 Ga0265327_10049370
372 Ga0307406_10071516
373 Ga0373930_0003789
374 Ga0373949_0005567
375 Ga0373952_0001244
376 Ga0373961_0003182
377 Ga0373931_0038028
378 Ga0373937_0074043
379 Ga0395899_0003434
380 Ga0395899_0007799
381 Ga0395899_0044715
382 Ga0395899_0117557
383 Ga0395900_0015290
384 Ga0395900_0017204
385 Ga0395900_0018382
386 Ga0395900_0035719
387 Ga0395900_0101270
388 Ga0395900_0343269
389 Ga0395898_0003946
390 Ga0395898_0033937
391 Ga0395898_0052154
392 Ga0395898_0075427
393 Ga0395898_0121835
394 Ga0395898_0135777
395 Ga0395898_0161898
396 Ga0395898_0164457
397 Ga0395898_0296133
398 Ga0395905_0019049
399 Ga0395905_0045593
400 Ga0395905_0077335
401 Ga0436364_0002718
402 Ga0436364_0572762
403 Ga0436364_1260201
404 Ga0395901_0011891
405 Ga0395901_0013639
406 Ga0395901_0015687
407 Ga0395901_0017208
408 Ga0395901_0018152
409 Ga0395901_0021961
410 Ga0395901_0031859
411 Ga0395901_0039919
412 Ga0395901_0137586
413 Ga0395901_0169322
414 Ga0395901_0203718
415 Ga0395901_0328423
416 Ga0436365_0933743
417 Ga0436365_1076794
418 Ga0436363_0460080
419 Ga0436363_1136793
420 Ga0436363_1534049
421 Ga0436362_0287735
422 Ga0466965_0009135
423 Ga0466966_0007597
424 Ga0466966_0031809
425 Ga0466963_0000078
426 Ga0466963_0004568
427 Ga0466963_0016564
428 Ga0466963_0078767
429 Ga0466971_0066909
430 Ga0466971_0087792
431 Ga0466970_0004396
432 Ga0466960_0033662
433 Ga0466959_0037292
434 Ga0466959_0041587
435 Ga0466958_0002055
436 Ga0466958_0035279
437 Ga0466967_0001286
438 Ga0466967_0006789
439 Ga0466967_0013663
440 Ga0466967_0041816
441 Ga0466967_0054179
442 Ga0466967_0069482
443 Ga0466967_0222266
444 Ga0466967_0349342
445 Ga0495629_0034076
446 Ga0495642_0022467
447 Ga0495645_0038581
448 Ga0495657_0019400
449 Ga0495600_0136156
450 Ga0495660_0051481
451 Ga0495581_0132270
452 Ga0495680_0019523
453 Ga0495602_0210258
454 Ga0496100_0029085
455 Ga0496100_0111155
456 Ga0496102_0057156
457 Ga0496104_0065277
458 Ga0496104_0106258
459 Ga0496104_0160300
460 Ga0496104_0174391
461 Ga0496104_0179522
462 Ga0496105_0013228
463 Ga0496105_0033984
464 Ga0496105_0270814
465 Ga0496106_0002316
466 Ga0496106_0023701
467 Ga0496107_0038575
468 Ga0496107_0042243
469 Ga0496107_0154441
470 Ga0496108_0184058
471 Ga0496109_0030693
472 Ga0496109_0447884
473 Ga0496110_0238826
474 Ga0496112_0046960
475 Ga0496112_0110447
476 Ga0496112_0154853
477 Ga0496112_0172439
478 Ga0496112_0211380
479 Ga0496112_0258104
480 Ga0496113_0097995
481 Ga0496113_0181613
482 Ga0496114_0052966
483 Ga0496114_0090923
484 Ga0496114_0123029
485 Ga0496115_0024690
486 Ga0496115_0124038
487 Ga0501069_0007737
488 nmdc:mga05p37_362564_c1
489 nmdc:mga08y16_19552_c1
490 nmdc:mga0n895_14494_c1
491 nmdc:mga0n895_225678_c1
492 nmdc:mga0n895_8814_c1
493 nmdc:mga0rr50_11847_c1
494 nmdc:mga0rr50_13519_c1
495 nmdc:mga08x19_1628_c1
496 nmdc:mga08x19_35970_c1
497 nmdc:mga0a205_56956_c1
498 Ga0495601_0195581
499 Ga0495595_0029309
500 Ga0466962_0000577

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02653

BPD_transp_2

Branched-chain amino acid transport system / permease component

126

405

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7kyo-assembly1.cif.gz_C-2 psabc from streptococcus pneumoniae in complex with fab 0.535 105 392
7kyo-assembly1.cif.gz_C-2 psabc from streptococcus pneumoniae in complex with fab 0.5228 105 392
4dbl-assembly1.cif.gz_B crystal structure of e159q mutant of btucdf 0.5102 94 390
4dbl-assembly2.cif.gz_F crystal structure of e159q mutant of btucdf 0.5083 110 399
2nq2-assembly1.cif.gz_B an inward-facing conformation of a putative metal-chelate type abc transporter. 0.5079 92 399
ID Description Score Start End Superfamily
af_P77672_36_301_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8106 104 391 1.10.3470.10
af_P77672_36_301_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.8021 104 391 1.10.3470.10
af_P0AGI1_45_314_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7822 104 391 1.10.3470.10
af_P0AGI1_45_314_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7742 104 391 1.10.3470.10
af_P0AGI4_56_383_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7711 108 386 1.10.3470.10
ID Description Score Start End GO Terms
AF-A0A3A4TWF9-F1-model_v4 ABC transporter permease 0.9589 105 363 GO:0005886
GO:0022857
AF-A0A847CXI5-F1-model_v4 ABC transporter permease 0.9585 104 358 GO:0005886
GO:0022857
AF-A0A661LL58-F1-model_v4 ABC transporter permease 0.9572 103 368 GO:0005886
GO:0022857
AF-A0A0F8XSU4-F1-model_v4 ABC transporter permease 0.9568 105 371 GO:0005886
GO:0022857
AF-R5F0Y9-F1-model_v4 deleted 0.956 103 363

Map