F361488

General Info

Members Datasets Scaffolds Average Seq Length
250 144 500 366

Family's Representative Sequence

Representative Sequence 3300006880|Ga0075429_100035103|Ga0075429_1000351032
Length 350
Sequence MERGSAMNIREIEAPTARWWRPDADGRLLCYLCPRLCRIGEGQAGFCYIRRNEGGELKSLAYAQPCALQIDPIEKKPLFHFYPGSRIFSMGTSGCNMGCKFCQNWEISKSREDQVRSVHLEPDEAVDAAVDRACPAIAFTYNEPTIWGEYVIDISREARRRRVRTVMVTNGYVTAEALPDIYENIDAANVDLKAFTEGFYQKLTLTHMEPVLETLVALSTLGVWVEVTTLIIPTLNDDMGEIHQLARWIVEHLGPERPLHLTAFHPDFKLNHLPPTPHETLHEARRVAMEAGLVHVYEGNVRCDEGATTWCPGCGRAVILRDWHRVVENRLTDGACGCGRRIAGRFADSA

Samples

Sample ID Description Type Environment
1 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
34 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
43 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
63 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
64 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
65 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
68 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
69 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
70 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
71 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
72 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
81 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
82 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
83 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
84 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
85 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
86 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
87 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
88 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
89 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
90 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
91 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
93 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
94 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
99 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
100 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
101 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
102 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
103 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
104 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
105 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
106 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
109 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
110 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
111 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
112 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
113 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
114 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
115 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
118 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
119 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
120 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
121 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
122 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
123 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
124 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
125 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
126 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
130 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
131 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
132 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
133 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
134 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
135 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
136 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
137 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
138 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
139 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
142 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
143 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
144 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98
Metatranscriptomes 2
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.8
Rhizosphere 96.8
Stem 0
Stem Tuber 0
Unclassified 4.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075429_100035103 3300006880 Bacteria 4359
2 Ga0065715_10147538 3300005293 Bacteria 1769
3 Ga0070683_100041418 3300005329 Bacteria 4237
4 Ga0070703_10006501 3300005406 Bacteria 3275
5 Ga0070709_10025821 3300005434 Bacteria 3473
6 Ga0070709_10092531 3300005434 Bacteria 1997
7 Ga0070714_100181970 3300005435 Bacteria 1913
8 Ga0070714_100237306 3300005435 Bacteria 1682
9 Ga0070713_100050967 3300005436 Bacteria 3422
10 Ga0070711_100028093 3300005439 Unclassified 3699
11 Ga0070694_100039662 3300005444 Bacteria 3136
12 Ga0070708_100001048 3300005445 Bacteria 21050
13 Ga0070706_100011207 3300005467 Bacteria 8325
14 Ga0070706_100056145 3300005467 Bacteria 3634
15 Ga0070706_100123546 3300005467 Bacteria 2413
16 Ga0070707_100000578 3300005468 Bacteria 36842
17 Ga0070707_100028309 3300005468 Bacteria 5332
18 Ga0070707_100353169 3300005468 Bacteria 1428
19 Ga0070698_100004369 3300005471 Bacteria 15536
20 Ga0070698_100214798 3300005471 Bacteria 1857
21 Ga0070698_100361916 3300005471 Bacteria 1382
22 Ga0070699_100147131 3300005518 Unclassified 2082
23 Ga0070679_100147270 3300005530 Bacteria 2332
24 Ga0070684_100219611 3300005535 Bacteria 1734
25 Ga0070697_100000634 3300005536 Bacteria 26650
26 Ga0070697_100012502 3300005536 Bacteria 6652
27 Ga0070697_100039232 3300005536 Bacteria 3828
28 Ga0070697_100075478 3300005536 Bacteria 2771
29 Ga0068853_100068271 3300005539 Bacteria 3090
30 Ga0070695_100004105 3300005545 Bacteria 8515
31 Ga0070696_100000745 3300005546 Bacteria 20783
32 Ga0070696_100017014 3300005546 Bacteria 4905
33 Ga0070693_100000089 3300005547 Bacteria 38952
34 Ga0070665_100035210 3300005548 Bacteria 5034
35 Ga0070704_100016945 3300005549 Bacteria 4619
36 Ga0068857_100018237 3300005577 Bacteria 6155
37 Ga0068863_100031054 3300005841 Bacteria 5101
38 Ga0068860_100321775 3300005843 Bacteria 1518
39 Ga0070717_10076723 3300006028 Bacteria 2797
40 Ga0070717_10171528 3300006028 Unclassified 1887
41 Ga0070716_100002633 3300006173 Bacteria 8296
42 Ga0070716_100003508 3300006173 Bacteria 7393
43 Ga0068871_100013726 3300006358 Bacteria 6022
44 Ga0075434_100043112 3300006871 Unclassified 4474
45 Ga0068865_100307326 3300006881 Bacteria 1271
46 Ga0075436_100001819 3300006914 Bacteria 14624
47 Ga0075436_100017134 3300006914 Bacteria 4958
48 Ga0075436_100021826 3300006914 Bacteria 4395
49 Ga0099794_10004073 3300007265 Bacteria 5687
50 Ga0099794_10016317 3300007265 Bacteria 3290
51 Ga0099794_10016973 3300007265 Bacteria 3237
52 Ga0099794_10034419 3300007265 Bacteria 2386
53 Ga0099794_10037188 3300007265 Bacteria 2304
54 Ga0099794_10058764 3300007265 Bacteria 1865
55 Ga0099794_10064267 3300007265 Bacteria 1788
56 Ga0099794_10101011 3300007265 Bacteria 1440
57 Ga0099795_10017436 3300007788 Bacteria 2289
58 Ga0099795_10023215 3300007788 Bacteria 2056
59 Ga0105240_10017344 3300009093 Bacteria 9709
60 Ga0105240_10061236 3300009093 Bacteria 4690
61 Ga0105240_10465311 3300009093 Bacteria 1412
62 Ga0105248_10046789 3300009177 Bacteria 4851
63 Ga0105248_10050728 3300009177 Bacteria 4654
64 Ga0105237_10013575 3300009545 Bacteria 8534
65 Ga0157370_10323838 3300013104 Bacteria 1421
66 Ga0157378_10000402 3300013297 Bacteria 42627
67 Ga0157378_10000696 3300013297 Bacteria 31646
68 Ga0163163_10011221 3300014325 Bacteria 8118
69 Ga0163163_10147180 3300014325 Bacteria 2400
70 Ga0157376_10000004 3300014969 Bacteria 508493
71 Ga0157376_10315326 3300014969 Bacteria 1485
72 Ga0228598_1001750 3300024227 Bacteria 4749
73 Ga0207653_10001523 3300025885 Bacteria 7505
74 Ga0207685_10067411 3300025905 Bacteria 1439
75 Ga0207699_10014044 3300025906 Bacteria 4117
76 Ga0207699_10166405 3300025906 Bacteria 1472
77 Ga0207684_10013608 3300025910 Bacteria 7032
78 Ga0207684_10044094 3300025910 Bacteria 3782
79 Ga0207684_10087038 3300025910 Bacteria 2661
80 Ga0207695_10071175 3300025913 Bacteria 3552
81 Ga0207693_10034217 3300025915 Bacteria 4008
82 Ga0207663_10005284 3300025916 Bacteria 6502
83 Ga0207652_10028991 3300025921 Bacteria 4623
84 Ga0207646_10000016 3300025922 Bacteria 337048
85 Ga0207646_10000030 3300025922 Bacteria 219473
86 Ga0207646_10002208 3300025922 Bacteria 23185
87 Ga0207646_10043092 3300025922 Bacteria 4053
88 Ga0207687_10091361 3300025927 Bacteria 2220
89 Ga0207700_10034239 3300025928 Bacteria 3645
90 Ga0207665_10000103 3300025939 Bacteria 55197
91 Ga0207665_10004700 3300025939 Bacteria 9070
92 Ga0207665_10047828 3300025939 Bacteria 2869
93 Ga0207665_10059671 3300025939 Bacteria 2582
94 Ga0207711_10056199 3300025941 Bacteria 3381
95 Ga0207639_10019881 3300026041 Bacteria 4798
96 Ga0207676_10043809 3300026095 Bacteria 3448
97 Ga0209588_1041477 3300027671 Bacteria 1486
98 Ga0209588_1063528 3300027671 Bacteria 1193
99 Ga0265354_1000050 3300028016 Bacteria 19370
100 Ga0265354_1000584 3300028016 Bacteria 6144
101 Ga0268266_10000366 3300028379 Bacteria 69519
102 Ga0268264_10048806 3300028381 Bacteria 3521
103 Ga0268264_10135466 3300028381 Bacteria 2189
104 Ga0265319_1000336 3300028563 Bacteria 34627
105 Ga0265318_10000274 3300028577 Bacteria 43537
106 Ga0265338_10011503 3300028800 Bacteria 10214
107 Ga0265338_10024857 3300028800 Bacteria 6104
108 Ga0265338_10103538 3300028800 Bacteria 2312
109 Ga0265770_1004473 3300030878 Unclassified 1908
110 Ga0265760_10000001 3300031090 Bacteria 217786
111 Ga0265760_10006696 3300031090 Bacteria 3299
112 Ga0265760_10011286 3300031090 Bacteria 2553
113 Ga0265760_10017752 3300031090 Unclassified 2045
114 Ga0265332_10030768 3300031238 Bacteria 2343
115 Ga0265320_10000260 3300031240 Bacteria 43532
116 Ga0265325_10002660 3300031241 Bacteria 11966
117 Ga0265325_10010843 3300031241 Bacteria 5254
118 Ga0265325_10023227 3300031241 Bacteria 3389
119 Ga0265340_10010023 3300031247 Bacteria 5075
120 Ga0265340_10017897 3300031247 Bacteria 3664
121 Ga0265339_10024602 3300031249 Bacteria 3467
122 Ga0265339_10072228 3300031249 Bacteria 1837
123 Ga0265331_10000412 3300031250 Bacteria 43512
124 Ga0265316_10008952 3300031344 Bacteria 9234
125 Ga0265316_10017654 3300031344 Bacteria 6156
126 Ga0265316_10045437 3300031344 Bacteria 3486
127 Ga0265313_10001865 3300031595 Bacteria 19169
128 Ga0265314_10016119 3300031711 Bacteria 5917
129 Ga0265314_10078215 3300031711 Bacteria 2191
130 Ga0265342_10000476 3300031712 Bacteria 43495
131 Ga0307406_10038342 3300031901 Bacteria 2966
132 Ga0307409_100376305 3300031995 Bacteria 1348
133 Ga0307416_100110265 3300032002 Bacteria 2423
134 Ga0307415_100061229 3300032126 Bacteria 2605
135 Ga0316212_1000689 3300033547 Bacteria 4251
136 Ga0373926_0004101 3300035083 Bacteria 4761
137 Ga0373954_0032542 3300035118 Bacteria 2411
138 Ga0373956_0009935 3300035119 Bacteria 3881
139 Ga0373956_0084915 3300035119 Bacteria 1455
140 Ga0373943_0046234 3300035170 Bacteria 2124
141 Ga0373955_0002995 3300035172 Bacteria 7401
142 Ga0373955_0011476 3300035172 Bacteria 4225
143 Ga0373955_0141268 3300035172 Bacteria 1412
144 Ga0373935_0008390 3300035692 Bacteria 6181
145 Ga0373927_0003602 3300035695 Bacteria 11047
146 Ga0373927_0011470 3300035695 Bacteria 5904
147 Ga0373933_0000129 3300035724 Bacteria 47946
148 Ga0373933_0022140 3300035724 Bacteria 3616
149 Ga0373947_0021450 3300035725 Bacteria 3738
150 Ga0373937_0000015 3300036401 Bacteria 148228
151 Ga0373937_0002842 3300036401 Bacteria 14466
152 Ga0373937_0078842 3300036401 Bacteria 3044
153 Ga0373925_0033573 3300037068 Bacteria 3780
154 Ga0451577_0022908 3300042876 Bacteria 5701
155 Ga0453683_0012445 3300044673 Bacteria 5574
156 Ga0453683_0024191 3300044673 Unclassified 3867
157 Ga0453684_0139679 3300044712 Bacteria 2895
158 Ga0453684_0444927 3300044712 Unclassified 1443
159 Ga0466957_0129889 3300044842 Bacteria 1613
160 Ga0466967_0194677 3300045976 Bacteria 1917
161 Ga0495592_0041991 3300046454 Bacteria 3426
162 Ga0495651_0000090 3300046462 Bacteria 66511
163 Ga0495651_0007671 3300046462 Bacteria 8250
164 Ga0495651_0013736 3300046462 Bacteria 6262
165 Ga0495651_0086724 3300046462 Bacteria 2354
166 Ga0495653_0007913 3300046463 Bacteria 8701
167 Ga0495653_0014369 3300046463 Bacteria 6459
168 Ga0495580_0005336 3300046472 Bacteria 10647
169 Ga0495580_0014531 3300046472 Bacteria 5968
170 Ga0495580_0071797 3300046472 Bacteria 2418
171 Ga0495580_0075191 3300046472 Unclassified 2357
172 Ga0495580_0122660 3300046472 Unclassified 1804
173 Ga0495582_0000244 3300046473 Bacteria 30302
174 Ga0495582_0092372 3300046473 Bacteria 1688
175 Ga0495662_0014538 3300046476 Bacteria 3826
176 Ga0495664_0036821 3300046477 Bacteria 2885
177 Ga0495664_0043019 3300046477 Bacteria 2676
178 Ga0495618_0010695 3300046514 Bacteria 5555
179 Ga0495618_0093209 3300046514 Bacteria 1926
180 Ga0495628_0000760 3300046516 Bacteria 29778
181 Ga0495628_0033174 3300046516 Bacteria 4163
182 Ga0495628_0131950 3300046516 Bacteria 1910
183 Ga0495630_0024607 3300046517 Bacteria 4449
184 Ga0495666_0008146 3300046526 Bacteria 5255
185 Ga0495666_0011375 3300046526 Bacteria 4440
186 Ga0495652_0006492 3300046529 Bacteria 10872
187 Ga0495652_0017423 3300046529 Bacteria 6409
188 Ga0495652_0036136 3300046529 Bacteria 4297
189 Ga0495665_0142531 3300046531 Bacteria 1252
190 Ga0495640_0025253 3300046533 Bacteria 4312
191 Ga0495587_0000219 3300046536 Bacteria 42459
192 Ga0495587_0003225 3300046536 Bacteria 10907
193 Ga0495645_0018244 3300046543 Bacteria 5038
194 Ga0495645_0029995 3300046543 Bacteria 3962
195 Ga0495667_0003304 3300046559 Bacteria 10803
196 Ga0495667_0009996 3300046559 Bacteria 6424
197 Ga0495634_0022135 3300046642 Bacteria 4481
198 Ga0495634_0027183 3300046642 Bacteria 3982
199 Ga0495635_0067616 3300046663 Bacteria 2451
200 Ga0495635_0122309 3300046663 Bacteria 1775
201 Ga0495657_0007119 3300046675 Bacteria 8678
202 Ga0495657_0027082 3300046675 Bacteria 4050
203 Ga0495599_0001332 3300046678 Bacteria 14071
204 Ga0495623_0001134 3300046679 Bacteria 18015
205 Ga0495623_0005950 3300046679 Bacteria 7952
206 Ga0495646_0001251 3300046680 Bacteria 14912
207 Ga0495646_0028242 3300046680 Bacteria 3515
208 Ga0495658_0027032 3300046683 Bacteria 3082
209 Ga0495669_0019412 3300046684 Bacteria 2934
210 Ga0495613_0110158 3300046689 Bacteria 1984
211 Ga0495613_0143797 3300046689 Bacteria 1703
212 Ga0495613_0249150 3300046689 Bacteria 1240
213 Ga0495624_0001216 3300046690 Bacteria 20279
214 Ga0495600_0001086 3300046809 Bacteria 14786
215 Ga0495581_0030204 3300047315 Bacteria 3141
216 Ga0495604_0001739 3300047317 Bacteria 17874
217 Ga0495604_0002036 3300047317 Bacteria 16333
218 Ga0495674_0011850 3300047319 Bacteria 8220
219 Ga0495674_0018213 3300047319 Bacteria 6539
220 Ga0495674_0026438 3300047319 Bacteria 5310
221 Ga0495680_0001715 3300047322 Bacteria 23260
222 Ga0495680_0020669 3300047322 Bacteria 5531
223 Ga0495680_0146396 3300047322 Bacteria 1725
224 Ga0495675_0001183 3300047444 Bacteria 15796
225 Ga0495675_0001436 3300047444 Bacteria 14422
226 Ga0495675_0002529 3300047444 Bacteria 10954
227 Ga0495675_0028503 3300047444 Bacteria 3559
228 Ga0495675_0069363 3300047444 Bacteria 2226
229 Ga0495684_0003706 3300047471 Bacteria 11911
230 Ga0495684_0008533 3300047471 Bacteria 7934
231 Ga0495602_0000206 3300048088 Bacteria 54913
232 Ga0495602_0026110 3300048088 Bacteria 5640
233 Ga0495602_0038126 3300048088 Bacteria 4449
234 Ga0495602_0043529 3300048088 Bacteria 4081
235 Ga0495602_0190524 3300048088 Bacteria 1573
236 Ga0495614_0015239 3300048089 Bacteria 3353
237 Ga0496101_0024572 3300048904 Bacteria 4171
238 Ga0496102_0023344 3300048905 Bacteria 5492
239 Ga0496103_0146297 3300048906 Bacteria 1512
240 Ga0496109_0207240 3300048912 Bacteria 1843
241 Ga0496112_0012416 3300048915 Bacteria 7831
242 Ga0496114_0017337 3300048917 Bacteria 5812
243 Ga0496115_0032989 3300048918 Bacteria 4087
244 nmdc:mga09592_33510_c1 3300050508 Bacteria 4288
245 nmdc:mga0n895_33815_c1 3300050512 Bacteria 4915
246 nmdc:mga0n895_96903_c1 3300050512 Unclassified 2955
247 nmdc:mga08x19_119578_c1 3300050514 Bacteria 1765
248 nmdc:mga08x19_71780_c1 3300050514 Bacteria 2258
249 nmdc:mga08x19_93_c1 3300050514 Bacteria 79849
250 Ga0495612_0092414 3300053078 Bacteria 1282
251 Ga0075429_100035103
252 Ga0065715_10147538
253 Ga0070683_100041418
254 Ga0070703_10006501
255 Ga0070709_10025821
256 Ga0070709_10092531
257 Ga0070714_100181970
258 Ga0070714_100237306
259 Ga0070713_100050967
260 Ga0070711_100028093
261 Ga0070694_100039662
262 Ga0070708_100001048
263 Ga0070706_100011207
264 Ga0070706_100056145
265 Ga0070706_100123546
266 Ga0070707_100000578
267 Ga0070707_100028309
268 Ga0070707_100353169
269 Ga0070698_100004369
270 Ga0070698_100214798
271 Ga0070698_100361916
272 Ga0070699_100147131
273 Ga0070679_100147270
274 Ga0070684_100219611
275 Ga0070697_100000634
276 Ga0070697_100012502
277 Ga0070697_100039232
278 Ga0070697_100075478
279 Ga0068853_100068271
280 Ga0070695_100004105
281 Ga0070696_100000745
282 Ga0070696_100017014
283 Ga0070693_100000089
284 Ga0070665_100035210
285 Ga0070704_100016945
286 Ga0068857_100018237
287 Ga0068863_100031054
288 Ga0068860_100321775
289 Ga0070717_10076723
290 Ga0070717_10171528
291 Ga0070716_100002633
292 Ga0070716_100003508
293 Ga0068871_100013726
294 Ga0075434_100043112
295 Ga0068865_100307326
296 Ga0075436_100001819
297 Ga0075436_100017134
298 Ga0075436_100021826
299 Ga0099794_10004073
300 Ga0099794_10016317
301 Ga0099794_10016973
302 Ga0099794_10034419
303 Ga0099794_10037188
304 Ga0099794_10058764
305 Ga0099794_10064267
306 Ga0099794_10101011
307 Ga0099795_10017436
308 Ga0099795_10023215
309 Ga0105240_10017344
310 Ga0105240_10061236
311 Ga0105240_10465311
312 Ga0105248_10046789
313 Ga0105248_10050728
314 Ga0105237_10013575
315 Ga0157370_10323838
316 Ga0157378_10000402
317 Ga0157378_10000696
318 Ga0163163_10011221
319 Ga0163163_10147180
320 Ga0157376_10000004
321 Ga0157376_10315326
322 Ga0228598_1001750
323 Ga0207653_10001523
324 Ga0207685_10067411
325 Ga0207699_10014044
326 Ga0207699_10166405
327 Ga0207684_10013608
328 Ga0207684_10044094
329 Ga0207684_10087038
330 Ga0207695_10071175
331 Ga0207693_10034217
332 Ga0207663_10005284
333 Ga0207652_10028991
334 Ga0207646_10000016
335 Ga0207646_10000030
336 Ga0207646_10002208
337 Ga0207646_10043092
338 Ga0207687_10091361
339 Ga0207700_10034239
340 Ga0207665_10000103
341 Ga0207665_10004700
342 Ga0207665_10047828
343 Ga0207665_10059671
344 Ga0207711_10056199
345 Ga0207639_10019881
346 Ga0207676_10043809
347 Ga0209588_1041477
348 Ga0209588_1063528
349 Ga0265354_1000050
350 Ga0265354_1000584
351 Ga0268266_10000366
352 Ga0268264_10048806
353 Ga0268264_10135466
354 Ga0265319_1000336
355 Ga0265318_10000274
356 Ga0265338_10011503
357 Ga0265338_10024857
358 Ga0265338_10103538
359 Ga0265770_1004473
360 Ga0265760_10000001
361 Ga0265760_10006696
362 Ga0265760_10011286
363 Ga0265760_10017752
364 Ga0265332_10030768
365 Ga0265320_10000260
366 Ga0265325_10002660
367 Ga0265325_10010843
368 Ga0265325_10023227
369 Ga0265340_10010023
370 Ga0265340_10017897
371 Ga0265339_10024602
372 Ga0265339_10072228
373 Ga0265331_10000412
374 Ga0265316_10008952
375 Ga0265316_10017654
376 Ga0265316_10045437
377 Ga0265313_10001865
378 Ga0265314_10016119
379 Ga0265314_10078215
380 Ga0265342_10000476
381 Ga0307406_10038342
382 Ga0307409_100376305
383 Ga0307416_100110265
384 Ga0307415_100061229
385 Ga0316212_1000689
386 Ga0373926_0004101
387 Ga0373954_0032542
388 Ga0373956_0009935
389 Ga0373956_0084915
390 Ga0373943_0046234
391 Ga0373955_0002995
392 Ga0373955_0011476
393 Ga0373955_0141268
394 Ga0373935_0008390
395 Ga0373927_0003602
396 Ga0373927_0011470
397 Ga0373933_0000129
398 Ga0373933_0022140
399 Ga0373947_0021450
400 Ga0373937_0000015
401 Ga0373937_0002842
402 Ga0373937_0078842
403 Ga0373925_0033573
404 Ga0451577_0022908
405 Ga0453683_0012445
406 Ga0453683_0024191
407 Ga0453684_0139679
408 Ga0453684_0444927
409 Ga0466957_0129889
410 Ga0466967_0194677
411 Ga0495592_0041991
412 Ga0495651_0000090
413 Ga0495651_0007671
414 Ga0495651_0013736
415 Ga0495651_0086724
416 Ga0495653_0007913
417 Ga0495653_0014369
418 Ga0495580_0005336
419 Ga0495580_0014531
420 Ga0495580_0071797
421 Ga0495580_0075191
422 Ga0495580_0122660
423 Ga0495582_0000244
424 Ga0495582_0092372
425 Ga0495662_0014538
426 Ga0495664_0036821
427 Ga0495664_0043019
428 Ga0495618_0010695
429 Ga0495618_0093209
430 Ga0495628_0000760
431 Ga0495628_0033174
432 Ga0495628_0131950
433 Ga0495630_0024607
434 Ga0495666_0008146
435 Ga0495666_0011375
436 Ga0495652_0006492
437 Ga0495652_0017423
438 Ga0495652_0036136
439 Ga0495665_0142531
440 Ga0495640_0025253
441 Ga0495587_0000219
442 Ga0495587_0003225
443 Ga0495645_0018244
444 Ga0495645_0029995
445 Ga0495667_0003304
446 Ga0495667_0009996
447 Ga0495634_0022135
448 Ga0495634_0027183
449 Ga0495635_0067616
450 Ga0495635_0122309
451 Ga0495657_0007119
452 Ga0495657_0027082
453 Ga0495599_0001332
454 Ga0495623_0001134
455 Ga0495623_0005950
456 Ga0495646_0001251
457 Ga0495646_0028242
458 Ga0495658_0027032
459 Ga0495669_0019412
460 Ga0495613_0110158
461 Ga0495613_0143797
462 Ga0495613_0249150
463 Ga0495624_0001216
464 Ga0495600_0001086
465 Ga0495581_0030204
466 Ga0495604_0001739
467 Ga0495604_0002036
468 Ga0495674_0011850
469 Ga0495674_0018213
470 Ga0495674_0026438
471 Ga0495680_0001715
472 Ga0495680_0020669
473 Ga0495680_0146396
474 Ga0495675_0001183
475 Ga0495675_0001436
476 Ga0495675_0002529
477 Ga0495675_0028503
478 Ga0495675_0069363
479 Ga0495684_0003706
480 Ga0495684_0008533
481 Ga0495602_0000206
482 Ga0495602_0026110
483 Ga0495602_0038126
484 Ga0495602_0043529
485 Ga0495602_0190524
486 Ga0495614_0015239
487 Ga0496101_0024572
488 Ga0496102_0023344
489 Ga0496103_0146297
490 Ga0496109_0207240
491 Ga0496112_0012416
492 Ga0496114_0017337
493 Ga0496115_0032989
494 nmdc:mga09592_33510_c1
495 nmdc:mga0n895_33815_c1
496 nmdc:mga0n895_96903_c1
497 nmdc:mga08x19_119578_c1
498 nmdc:mga08x19_71780_c1
499 nmdc:mga08x19_93_c1
500 Ga0495612_0092414

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

90

249

0.85

PF13353

Fer4_12

4Fe-4S single cluster domain

83

205

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3can-assembly1.cif.gz_A-2 crystal structure of a domain of pyruvate-formate lyase-activating enzyme from bacteroides vulgatus atcc 8482 0.8054 135 300
3can-assembly1.cif.gz_A-2 crystal structure of a domain of pyruvate-formate lyase-activating enzyme from bacteroides vulgatus atcc 8482 0.7917 135 300
8fsi-assembly1.cif.gz_A the structure of a crystallizable variant of e. coli pyruvate formate-lyase activating enzyme bound to sam 0.7585 62 296
3cb8-assembly1.cif.gz_A 4fe-4s-pyruvate formate-lyase activating enzyme in complex with adomet and a peptide substrate 0.7584 62 295
8fsi-assembly1.cif.gz_A the structure of a crystallizable variant of e. coli pyruvate formate-lyase activating enzyme bound to sam 0.7274 62 296
ID Description Score Start End Superfamily
af_P95188_67_289_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8845 75 296 3.20.20.70
af_P95188_67_289_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8771 75 296 3.20.20.70
af_Q58218_60_281_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8618 72 297 3.20.20.70
af_Q58218_60_281_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8582 72 297 3.20.20.70
3canA00 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;pyruvate-formate lyase- activating enzyme 0.8071 135 300 3.80.30.10
ID Description Score Start End GO Terms
AF-A0A3D0H8U2-F1-model_v4 Radical SAM protein 0.9462 12 95 GO:0046872
GO:0051539
AF-X1K8H4-F1-model_v4 Radical SAM core domain-containing protein 0.946 224 303 GO:0046872
GO:0051539
AF-A0A7J2Z049-F1-model_v4 Radical SAM protein 0.9362 13 185 GO:0003824
GO:0046872
GO:0051539
AF-A0A7J2Z049-F1-model_v4 Radical SAM protein 0.9256 13 185 GO:0003824
GO:0046872
GO:0051539
AF-A0A3D0H8U2-F1-model_v4 Radical SAM protein 0.9251 12 95 GO:0046872
GO:0051539

Map