F361202

General Info

Members Datasets Scaffolds Average Seq Length
249 179 196 449

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2909042592|2909045257
Length 502
Sequence VSLEIPAAGAVRGSTFPALFIEDEHIEASMRDEPAAPLLSSTVSTPVAYFLREIWQAVGGDAAHLSHLAIEGTGALPSTFHVTDLAGAAVGAASLAIAELASLQQGKFPAVQVDRRLASFWFLTSLRPQGWSMPPQWDVVAGDYRAADGWIRLHTNAPHHRDAALAVLKTPIDREAVAAAVEQWQAEALETAIVAKNGCAAAMRTLDQWADHAQGRTVNAEPLLHRSSSAGGHRSHVLPLPGRPLQGVRVLDLTRILAGPVATRFLAGFGAEVLRIDPPGWEEPATVPEVVLGKRCARLDLRNSDDLHVLERLLAQADVFVHGYRPDALTRLGLDSARRRQLNPGLIDVCLDAYGWSGPWHGRRGYDSLIQMSTGIAEAGMRAAGRDRPTPLPGQAIDHATGYLLAAAAIRGLVERLQTGRGYEIRGSLARTAHLLVSTRNQVREAEALAPEQPSDWSASIEQTGWGPARRLRPPVAIADIPMRWDLAAPKLGSSAAAWLAG

Samples

Sample ID Description Type Environment
1 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
2 2511231035 Pantoea sp. GM01 Isolate Rhizosphere
3 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
4 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
5 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
6 2599185288 Pseudomonas sp. NFACC25 Isolate Rhizoplane
7 2599185303 Pseudomonas sp. NFACC42-2 Isolate Rhizoplane
8 2643221609 Acidovorax sp. Root217 Isolate Unclassified
9 2643221611 Acidovorax sp. Root219 Isolate Unclassified
10 2721755523 Delftia sp. HK171 Isolate Unclassified
11 2738541271 Pseudomonas sp. GV021 Isolate Unclassified
12 2738543012 Acidovorax sp. CF301 Isolate Unclassified
13 2738543016 Pseudomonas sp. GV012 Isolate Unclassified
14 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
15 2816332133 Acidovorax radicis 2721A Isolate Unclassified
16 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
17 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
18 2818991456 Pseudomonas koreensis 3286 Isolate Rhizosphere
19 2831426010 Nostoc sp. 106C Isolate Unclassified
20 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
21 2842832357 Pseudomonas sp. R-72164 Isolate Unclassified
22 2847085930 Erwinia persicina B64 Isolate Bulb
23 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
24 2849660919 Nostoc sp. T09 Isolate Unclassified
25 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
26 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
27 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
28 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
29 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
30 2902330777 Methylobacterium sp. 2A Isolate Unclassified
31 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
32 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
33 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
34 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
35 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
36 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
37 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere
38 2909042592 Labrys sp. LIt4 Isolate Nodule
39 2912963787 Pseudomonas sp. R32 Isolate Rhizosphere
40 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
41 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
42 2919385768 Pseudomonas sp. 2957 Isolate Unclassified
43 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
44 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
45 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
46 2945961074 Pseudomonas sp. W2I6 Isolate Rhizosphere
47 2974289157 Pseudomonas fluorescens SORGH_AS 191 Isolate Unclassified
48 2998139840 Pseudomonas iranensis SWRI54 Isolate Rhizosphere
49 3007861166 Pseudomonas hamedanensis SWRI65 Isolate Rhizosphere
50 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
51 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
52 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
53 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
54 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
55 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
56 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
57 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
58 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
59 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
60 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
61 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
62 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
63 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
64 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
65 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
66 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
67 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
68 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
69 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
70 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
71 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
72 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
73 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
74 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
75 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
76 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
77 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
78 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
79 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
80 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
81 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
82 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
83 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
84 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
85 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
86 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
87 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
88 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
90 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
92 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
93 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
94 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
111 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
116 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
117 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
118 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
119 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
120 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
121 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
122 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
123 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
124 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
125 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
126 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
127 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
128 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
129 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
130 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
131 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
132 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
133 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
134 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
135 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
136 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
137 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
138 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
139 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
140 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
141 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
142 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
143 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
144 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
145 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
146 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
147 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
148 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
149 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
150 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
151 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
152 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
153 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
154 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
155 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
156 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
157 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
158 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
159 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
160 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
161 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
164 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
165 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
166 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
167 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
168 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
169 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
170 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
171 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
172 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
173 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
174 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
175 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
176 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
177 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
178 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
179 8056166840 Pseudomonas triticicola SWRI88 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.71
Metatranscriptomes 0
Isolates 21.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0.4
Endosphere 4.02
Nodule 2.41
Rhizoplane 1.61
Rhizosphere 56.63
Stem 0
Stem Tuber 0
Unclassified 34.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000108 3300002704 Bacteria 44079
2 JGI25155J39150_1000126 3300002704 Bacteria 37345
3 JGI25155J39150_1000198 3300002704 Bacteria 25200
4 JGI25156J39149_1000057 3300002705 Bacteria 86392
5 JGI25156J39149_1002477 3300002705 Bacteria 6587
6 JGI25154J39366_1000087 3300002738 Bacteria 86392
7 JGI25154J39366_1000206 3300002738 Bacteria 42302
8 JGI25157J39369_1000156 3300002741 Bacteria 56715
9 rootH2_10001360 3300003320 Bacteria 48496
10 Ga0055532_1000016 3300003758 Bacteria 327509
11 Ga0058692_1000117 3300003856 Bacteria 51880
12 Ga0058692_1000452 3300003856 Bacteria 18538
13 Ga0065704_10008159 3300005289 Bacteria 2156
14 Ga0070670_100000181 3300005331 Bacteria 57536
15 Ga0070668_100000127 3300005347 Bacteria 47273
16 Ga0070667_100000318 3300005367 Bacteria 53641
17 Ga0070665_100001410 3300005548 Bacteria 28253
18 Ga0068855_100000037 3300005563 Bacteria 158161
19 Ga0068856_100020325 3300005614 Bacteria 6450
20 Ga0068864_100000168 3300005618 Bacteria 60403
21 Ga0068863_100000333 3300005841 Bacteria 47923
22 Ga0068860_100001370 3300005843 Bacteria 26465
23 Ga0068862_100000382 3300005844 Bacteria 47835
24 Ga0070717_10019905 3300006028 Bacteria 5270
25 Ga0075436_100034253 3300006914 Bacteria 3502
26 Ga0079104_1000025 3300006946 Bacteria 218785
27 Ga0105251_10004007 3300009011 Bacteria 10406
28 Ga0105251_10007812 3300009011 Bacteria 6515
29 Ga0105250_10000459 3300009092 Bacteria 29275
30 Ga0105250_10001558 3300009092 Bacteria 12319
31 Ga0105240_10000497 3300009093 Bacteria 72381
32 Ga0105240_10001613 3300009093 Bacteria 38233
33 Ga0105240_10023311 3300009093 Bacteria 8190
34 Ga0105240_10047012 3300009093 Bacteria 5463
35 Ga0105237_10007250 3300009545 Bacteria 12162
36 Ga0105238_10009264 3300009551 Bacteria 9853
37 Ga0105238_10013256 3300009551 Bacteria 8317
38 Ga0105249_10000818 3300009553 Bacteria 28052
39 Ga0105239_10000063 3300010375 Bacteria 151845
40 Ga0105239_10048737 3300010375 Bacteria 4645
41 Ga0105246_10002542 3300011119 Bacteria 11029
42 Ga0157373_10047044 3300013100 Bacteria 3078
43 Ga0157371_10020875 3300013102 Bacteria 4817
44 Ga0163162_10295533 3300013306 Bacteria 1752
45 Ga0163162_10322883 3300013306 Bacteria 1676
46 Ga0157372_10238294 3300013307 Bacteria 2111
47 Ga0182006_1000927 3300015261 Bacteria 19566
48 Ga0182007_10021338 3300015262 Bacteria 2301
49 Ga0163161_10017758 3300017792 Bacteria 4985
50 Ga0163161_10058773 3300017792 Bacteria 2795
51 Ga0213872_10015937 3300021361 Unclassified 3491
52 Ga0213872_10050962 3300021361 Unclassified 1879
53 Ga0209435_100016 3300025206 Bacteria 305566
54 Ga0209435_100038 3300025206 Bacteria 120273
55 Ga0209147_100023 3300025229 Bacteria 437803
56 Ga0209437_100166 3300025233 Bacteria 144787
57 Ga0209258_100368 3300025242 Bacteria 59722
58 Ga0209646_1000033 3300025246 Bacteria 369507
59 Ga0209646_1000093 3300025246 Bacteria 183840
60 Ga0209026_1000031 3300025250 Bacteria 325747
61 Ga0209759_1000045 3300025256 Bacteria 235654
62 Ga0209759_1000248 3300025256 Bacteria 80537
63 Ga0209759_1004309 3300025256 Bacteria 5352
64 Ga0209676_1001133 3300025292 Bacteria 29195
65 Ga0207696_1000246 3300025711 Bacteria 73989
66 Ga0207713_1000426 3300025735 Bacteria 44662
67 Ga0207695_10000633 3300025913 Bacteria 70372
68 Ga0207695_10001904 3300025913 Bacteria 32555
69 Ga0207695_10003480 3300025913 Bacteria 22153
70 Ga0207695_10005294 3300025913 Bacteria 17197
71 Ga0207695_10027900 3300025913 Bacteria 6275
72 Ga0207671_10008735 3300025914 Bacteria 8538
73 Ga0207694_10058419 3300025924 Bacteria 3000
74 Ga0207650_10000201 3300025925 Bacteria 69058
75 Ga0207709_10000170 3300025935 Bacteria 87011
76 Ga0207667_10000053 3300025949 Bacteria 226712
77 Ga0207712_10000948 3300025961 Bacteria 20916
78 Ga0207668_10000247 3300025972 Bacteria 36155
79 Ga0207658_10000052 3300025986 Bacteria 128748
80 Ga0207702_10054798 3300026078 Bacteria 3380
81 Ga0207641_10006142 3300026088 Bacteria 10162
82 Ga0207676_10005159 3300026095 Bacteria 9245
83 Ga0207698_10015736 3300026142 Bacteria 5078
84 Ga0209281_1000007 3300027111 Bacteria 938265
85 Ga0209281_1007962 3300027111 Bacteria 2609
86 Ga0209371_1000122 3300027312 Bacteria 132545
87 Ga0209371_1010742 3300027312 Bacteria 2783
88 Ga0268266_10003717 3300028379 Bacteria 15015
89 Ga0268265_10004166 3300028380 Bacteria 10131
90 Ga0268264_10000684 3300028381 Bacteria 39491
91 Ga0268256_1000048 3300030500 Bacteria 312298
92 Ga0268256_1011564 3300030500 Bacteria 2783
93 Ga0307405_10008531 3300031731 Bacteria 5203
94 Ga0307414_10092020 3300032004 Bacteria 2256
95 Ga0307411_10018681 3300032005 Bacteria 3984
96 Ga0400483_261812 3300039062 Bacteria 1557
97 Ga0436361_0433365 3300039447 Unclassified 3241
98 Ga0436361_0870387 3300039447 Bacteria 7474
99 Ga0439438_002171 3300041405 Bacteria 8456
100 Ga0439447_002919 3300041407 Bacteria 6121
101 Ga0439445_0020639 3300042004 Bacteria 1650
102 Ga0439456_000071 3300042013 Bacteria 36014
103 Ga0450894_003660 3300042131 Bacteria 2008
104 Ga0466977_0000184 3300044666 Bacteria 16121
105 Ga0466959_0118750 3300045049 Bacteria 1881
106 Ga0466967_0049256 3300045976 Bacteria 3683
107 Ga0495617_015303 3300046452 Bacteria 2600
108 Ga0495627_003608 3300046453 Bacteria 6736
109 Ga0495627_029305 3300046453 Bacteria 1752
110 Ga0495591_000075 3300046458 Bacteria 112616
111 Ga0495591_003835 3300046458 Bacteria 7603
112 Ga0495591_004598 3300046458 Bacteria 6663
113 Ga0495650_0000031 3300046471 Bacteria 433811
114 Ga0495605_0030284 3300046474 Bacteria 2776
115 Ga0495584_0019250 3300046491 Bacteria 3467
116 Ga0495584_0036942 3300046491 Bacteria 2467
117 Ga0495607_0002714 3300046501 Bacteria 14118
118 Ga0495607_0065753 3300046501 Bacteria 2043
119 Ga0495606_0000784 3300046507 Bacteria 48577
120 Ga0495606_0010270 3300046507 Bacteria 7796
121 Ga0495620_0008250 3300046515 Bacteria 5601
122 Ga0495630_0042078 3300046517 Bacteria 3412
123 Ga0495632_0014896 3300046519 Bacteria 4381
124 Ga0495632_0021481 3300046519 Bacteria 3477
125 Ga0495648_0002043 3300046524 Bacteria 19147
126 Ga0495648_0019472 3300046524 Bacteria 4771
127 Ga0495652_0147625 3300046529 Bacteria 1841
128 Ga0495654_0000019 3300046530 Bacteria 289483
129 Ga0495654_0004515 3300046530 Bacteria 8237
130 Ga0495609_0015944 3300046538 Bacteria 3507
131 Ga0495625_0003605 3300046660 Bacteria 15212
132 Ga0495625_0097257 3300046660 Bacteria 2026
133 Ga0495661_0004628 3300046665 Bacteria 9899
134 Ga0495671_0006620 3300046692 Bacteria 6680
135 Ga0495589_0005288 3300046794 Bacteria 6821
136 Ga0495589_0055579 3300046794 Bacteria 1950
137 Ga0495660_0000344 3300046810 Bacteria 41225
138 Ga0495660_0022386 3300046810 Bacteria 3608
139 Ga0495672_0000001 3300047320 Bacteria 1458820
140 Ga0495672_0050611 3300047320 Bacteria 2450
141 Ga0495680_0024779 3300047322 Bacteria 4971
142 Ga0495679_013528 3300047446 Bacteria 3058
143 Ga0495679_017128 3300047446 Bacteria 2602
144 Ga0495673_0000131 3300047469 Bacteria 138169
145 Ga0495673_0019397 3300047469 Bacteria 3407
146 Ga0495681_0013301 3300047470 Bacteria 4784
147 Ga0495681_0025062 3300047470 Bacteria 3126
148 Ga0495593_0037758 3300047673 Bacteria 2611
149 Ga0496105_0061403 3300048908 Bacteria 3101
150 Ga0496106_0069891 3300048909 Bacteria 2681
151 Ga0496116_0000250 3300048919 Bacteria 96353
152 Ga0496116_0002478 3300048919 Bacteria 19342
153 Ga0496117_0008920 3300048920 Bacteria 9444
154 Ga0496117_0018404 3300048920 Bacteria 5785
155 Ga0496117_0095854 3300048920 Bacteria 1894
156 Ga0496118_0001935 3300048921 Bacteria 29331
157 Ga0496118_0005687 3300048921 Bacteria 14045
158 Ga0496118_0029561 3300048921 Bacteria 4592
159 Ga0496118_0047096 3300048921 Bacteria 3347
160 Ga0496118_0072284 3300048921 Bacteria 2478
161 Ga0496119_0000093 3300048922 Bacteria 130450
162 Ga0496119_0000845 3300048922 Bacteria 40440
163 Ga0496119_0001363 3300048922 Bacteria 29819
164 Ga0496119_0019026 3300048922 Bacteria 5080
165 Ga0496119_0048155 3300048922 Bacteria 2646
166 Ga0496120_0000002 3300048923 Bacteria 547999
167 Ga0496120_0000170 3300048923 Bacteria 110378
168 Ga0496120_0000210 3300048923 Bacteria 100008
169 Ga0496120_0000578 3300048923 Bacteria 55746
170 Ga0496120_0009762 3300048923 Bacteria 6770
171 Ga0496121_0015507 3300048924 Bacteria 7977
172 Ga0496121_0021865 3300048924 Bacteria 6244
173 Ga0496121_0029335 3300048924 Bacteria 5091
174 Ga0496121_0138349 3300048924 Bacteria 1810
175 Ga0496122_0000375 3300048925 Bacteria 95681
176 Ga0496123_0000267 3300048926 Bacteria 104282
177 Ga0496123_0068277 3300048926 Bacteria 2240
178 Ga0496124_0000383 3300048927 Bacteria 80834
179 Ga0496124_0009488 3300048927 Bacteria 10016
180 Ga0496125_0000694 3300048928 Bacteria 55573
181 Ga0496125_0005264 3300048928 Bacteria 14485
182 Ga0496125_0024649 3300048928 Bacteria 5526
183 Ga0496125_0067352 3300048928 Bacteria 2822
184 Ga0496126_0003093 3300048929 Bacteria 21518
185 Ga0496126_0033065 3300048929 Bacteria 4867
186 Ga0496126_0052571 3300048929 Bacteria 3701
187 Ga0496126_0070746 3300048929 Bacteria 3107
188 Ga0495678_000221 3300049459 Bacteria 66024
189 Ga0495682_0000001 3300049460 Bacteria 1559116
190 Ga0501241_000649 3300049758 Bacteria 7473
191 nmdc:mga08x19_75738_c1 3300050514 Bacteria 2201
192 Ga0500635_0025056 3300053080 Bacteria 1877
193 Ga0500618_005493 3300053125 Bacteria 3844
194 Ga0500621_000002 3300053126 Bacteria 849473
195 Ga0500573_0060103 3300053140 Bacteria 2177
196 Ga0500634_0080952 3300053161 Bacteria 1674

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039062 Ga0400483_261812 Ga0400483_261812_100_1356 382
2 3300045049 Ga0466959_0118750 Ga0466959_0118750_396_1712 402
3 3300009011 Ga0105251_10004007 Ga0105251_100040072 403
4 3300009092 Ga0105250_10000459 Ga0105250_1000045919 403
5 3300013306 Ga0163162_10295533 Ga0163162_102955331 403
6 3300017792 Ga0163161_10017758 Ga0163161_100177583 403
7 3300025711 Ga0207696_1000246 Ga0207696_100024624 403
8 3300025735 Ga0207713_1000426 Ga0207713_100042623 403
9 3300031731 Ga0307405_10008531 Ga0307405_100085312 403
10 3300042131 Ga0450894_003660 Ga0450894_003660_332_1681 403
11 3300048920 Ga0496117_0018404 Ga0496117_0018404_2760_4109 403
12 3300048921 Ga0496118_0047096 Ga0496118_0047096_1884_3233 403
13 3300048922 Ga0496119_0048155 Ga0496119_0048155_383_1732 403
14 3300053080 Ga0500635_0025056 Ga0500635_0025056_401_1783 404
15 3300046794 Ga0495589_0055579 Ga0495589_0055579_392_1741 412
16 3300005289 Ga0065704_10008159 Ga0065704_100081592 413
17 3300013306 Ga0163162_10322883 Ga0163162_103228831 413
18 3300048924 Ga0496121_0029335 Ga0496121_0029335_1883_3232 413
19 3300048924 Ga0496121_0138349 Ga0496121_0138349_400_1749 413
20 3300009551 Ga0105238_10009264 Ga0105238_100092644 414
21 3300009093 Ga0105240_10001613 Ga0105240_100016132 415
22 3300010375 Ga0105239_10000063 Ga0105239_1000006333 415
23 3300025913 Ga0207695_10000633 Ga0207695_1000063333 415
24 3300046529 Ga0495652_0147625 Ga0495652_0147625_296_1645 415
25 3300048908 Ga0496105_0061403 Ga0496105_0061403_893_2263 415
26 3300048922 Ga0496119_0000093 Ga0496119_0000093_32971_34341 415
27 3300048923 Ga0496120_0000170 Ga0496120_0000170_71939_73309 415
28 3300048929 Ga0496126_0070746 Ga0496126_0070746_1449_2798 415
29 3300009093 Ga0105240_10047012 Ga0105240_100470124 417
30 3300015261 Ga0182006_1000927 Ga0182006_100092715 417
31 3300025256 Ga0209759_1004309 Ga0209759_10043092 417
32 3300009545 Ga0105237_10007250 Ga0105237_100072508 418
33 3300045976 Ga0466967_0049256 Ga0466967_0049256_1613_2983 418
34 3300046524 Ga0495648_0019472 Ga0495648_0019472_3059_4408 418
35 3300009092 Ga0105250_10001558 Ga0105250_100015589 419
36 3300025935 Ga0207709_10000170 Ga0207709_1000017032 419
37 3300048921 Ga0496118_0001935 Ga0496118_0001935_9222_10592 419
38 3300005331 Ga0070670_100000181 Ga0070670_10000018113 421
39 3300005347 Ga0070668_100000127 Ga0070668_10000012743 421
40 3300005367 Ga0070667_100000318 Ga0070667_10000031843 421
41 3300005548 Ga0070665_100001410 Ga0070665_10000141023 421
42 3300005618 Ga0068864_100000168 Ga0068864_10000016812 421
43 3300005841 Ga0068863_100000333 Ga0068863_10000033313 421
44 3300005843 Ga0068860_100001370 Ga0068860_10000137012 421
45 3300005844 Ga0068862_100000382 Ga0068862_10000038244 421
46 3300009553 Ga0105249_10000818 Ga0105249_1000081817 421
47 3300025925 Ga0207650_10000201 Ga0207650_1000020128 421
48 3300025961 Ga0207712_10000948 Ga0207712_100009489 421
49 3300025972 Ga0207668_10000247 Ga0207668_1000024725 421
50 3300025986 Ga0207658_10000052 Ga0207658_1000005255 421
51 3300026088 Ga0207641_10006142 Ga0207641_100061425 421
52 3300026095 Ga0207676_10005159 Ga0207676_100051595 421
53 3300028379 Ga0268266_10003717 Ga0268266_100037174 421
54 3300028380 Ga0268265_10004166 Ga0268265_100041669 421
55 3300028381 Ga0268264_10000684 Ga0268264_1000068421 421
56 3300017792 Ga0163161_10058773 Ga0163161_100587732 423
57 3300025913 Ga0207695_10003480 Ga0207695_1000348016 423
58 3300011119 Ga0105246_10002542 Ga0105246_1000254213 424
59 3300006946 Ga0079104_1000025 Ga0079104_100002547 425
60 3300027111 Ga0209281_1000007 Ga0209281_1000007173 425
61 3300046453 Ga0495627_029305 Ga0495627_029305_387_1718 425
62 3300046517 Ga0495630_0042078 Ga0495630_0042078_1975_3306 425
63 3300047322 Ga0495680_0024779 Ga0495680_0024779_532_1863 425
64 3300047469 Ga0495673_0019397 Ga0495673_0019397_2042_3385 425
65 3300047673 Ga0495593_0037758 Ga0495593_0037758_1143_2474 425
66 3300025914 Ga0207671_10008735 Ga0207671_100087355 426
67 3300046660 Ga0495625_0003605 Ga0495625_0003605_9843_11228 426
68 3300027111 Ga0209281_1007962 Ga0209281_10079622 427
69 iso_pu_bacteria 2599185288 2599882040 427
70 iso_pu_bacteria 2599185303 2599950063 427
71 iso_pu_bacteria 2818991456 2819656030 427
72 iso_pu_bacteria 2839094727 2839095554 427
73 iso_pu_bacteria 2842832357 2842837210 427
74 iso_pu_bacteria 2919385768 2919388356 427
75 iso_pu_bacteria 2945961074 2945965555 427
76 iso_pu_bacteria 2974289157 2974289570 427
77 iso_pu_bacteria 2998139840 2998144345 427
78 iso_pu_bacteria 3007861166 3007865800 427
79 iso_pu_bacteria 8056166840 8056166917 427
80 3300053140 Ga0500573_0060103 Ga0500573_0060103_113_1627 428
81 iso_pu_bacteria 2511231035 2511436603 429
82 iso_pu_bacteria 2939602548 2939603574 429
83 iso_pu_bacteria 2902330777 2902336375 430
84 iso_pu_bacteria 2912963787 2912964817 430
85 3300009011 Ga0105251_10007812 Ga0105251_100078123 431
86 3300013102 Ga0157371_10020875 Ga0157371_100208753 431
87 3300015262 Ga0182007_10021338 Ga0182007_100213382 431
88 3300025292 Ga0209676_1001133 Ga0209676_100113316 431
89 3300032004 Ga0307414_10092020 Ga0307414_100920202 431
90 3300032005 Ga0307411_10018681 Ga0307411_100186812 431
91 3300042004 Ga0439445_0020639 Ga0439445_0020639_58_1407 431
92 3300046453 Ga0495627_003608 Ga0495627_003608_1785_3134 431
93 3300046458 Ga0495591_003835 Ga0495591_003835_3686_5035 431
94 3300046491 Ga0495584_0019250 Ga0495584_0019250_1628_2977 431
95 3300046501 Ga0495607_0065753 Ga0495607_0065753_578_1927 431
96 3300046507 Ga0495606_0010270 Ga0495606_0010270_2771_4120 431
97 3300046515 Ga0495620_0008250 Ga0495620_0008250_2855_4204 431
98 3300046519 Ga0495632_0014896 Ga0495632_0014896_1928_3277 431
99 3300046519 Ga0495632_0021481 Ga0495632_0021481_42_1391 431
100 3300046660 Ga0495625_0097257 Ga0495625_0097257_659_2005 431
101 3300046665 Ga0495661_0004628 Ga0495661_0004628_4311_5660 431
102 3300046794 Ga0495589_0005288 Ga0495589_0005288_3370_4719 431
103 3300046810 Ga0495660_0022386 Ga0495660_0022386_1077_2423 431
104 3300047320 Ga0495672_0050611 Ga0495672_0050611_688_2040 431
105 3300047446 Ga0495679_013528 Ga0495679_013528_1584_2933 431
106 3300047446 Ga0495679_017128 Ga0495679_017128_1121_2467 431
107 3300047470 Ga0495681_0013301 Ga0495681_0013301_3192_4538 431
108 3300048920 Ga0496117_0008920 Ga0496117_0008920_3762_5111 431
109 3300048921 Ga0496118_0072284 Ga0496118_0072284_803_2152 431
110 3300048922 Ga0496119_0019026 Ga0496119_0019026_2092_3441 431
111 3300048923 Ga0496120_0009762 Ga0496120_0009762_3775_5124 431
112 3300048926 Ga0496123_0068277 Ga0496123_0068277_266_1615 431
113 3300048927 Ga0496124_0009488 Ga0496124_0009488_4366_5715 431
114 3300048928 Ga0496125_0005264 Ga0496125_0005264_4303_5652 431
115 3300048929 Ga0496126_0033065 Ga0496126_0033065_286_1635 431
116 3300049758 Ga0501241_000649 Ga0501241_000649_926_2272 431
117 3300050514 nmdc:mga08x19_75738_c1 nmdc:mga08x19_75738_c1_359_1711 431
118 iso_pu_bacteria 2847085930 2847087236 431
119 iso_pu_bacteria 2908669403 2908673970 431
120 3300026142 Ga0207698_10015736 Ga0207698_100157364 432
121 3300047470 Ga0495681_0025062 Ga0495681_0025062_93_1445 432
122 3300003856 Ga0058692_1000117 Ga0058692_100011735 433
123 3300003856 Ga0058692_1000452 Ga0058692_10004524 433
124 3300027312 Ga0209371_1000122 Ga0209371_100012291 433
125 3300027312 Ga0209371_1010742 Ga0209371_10107422 433
126 3300030500 Ga0268256_1000048 Ga0268256_1000048226 433
127 3300030500 Ga0268256_1011564 Ga0268256_10115642 433
128 3300046452 Ga0495617_015303 Ga0495617_015303_834_2195 433
129 3300046458 Ga0495591_000075 Ga0495591_000075_41341_42702 433
130 3300046530 Ga0495654_0000019 Ga0495654_0000019_113323_114684 433
131 3300048929 Ga0496126_0052571 Ga0496126_0052571_1609_2970 433
132 iso_pu_bacteria 2831426010 2831426843 433
133 iso_pu_bacteria 2848694841 2848697147 433
134 iso_pu_bacteria 2849660919 2849663334 433
135 3300042013 Ga0439456_000071 Ga0439456_000071_2942_4300 434
136 3300046458 Ga0495591_004598 Ga0495591_004598_2245_3615 435
137 3300046471 Ga0495650_0000031 Ga0495650_0000031_93629_94999 435
138 3300046474 Ga0495605_0030284 Ga0495605_0030284_476_1846 435
139 3300046491 Ga0495584_0036942 Ga0495584_0036942_375_1745 435
140 3300046501 Ga0495607_0002714 Ga0495607_0002714_2539_3909 435
141 3300046507 Ga0495606_0000784 Ga0495606_0000784_18278_19648 435
142 3300046524 Ga0495648_0002043 Ga0495648_0002043_11910_13280 435
143 3300046530 Ga0495654_0004515 Ga0495654_0004515_4078_5448 435
144 3300046692 Ga0495671_0006620 Ga0495671_0006620_3192_4562 435
145 3300046810 Ga0495660_0000344 Ga0495660_0000344_14276_15646 435
146 3300047320 Ga0495672_0000001 Ga0495672_0000001_601145_602515 435
147 3300047469 Ga0495673_0000131 Ga0495673_0000131_79168_80538 435
148 3300048919 Ga0496116_0000250 Ga0496116_0000250_52060_53442 435
149 3300048920 Ga0496117_0095854 Ga0496117_0095854_493_1863 435
150 3300048921 Ga0496118_0005687 Ga0496118_0005687_12484_13854 435
151 3300048922 Ga0496119_0000845 Ga0496119_0000845_12014_13396 435
152 3300048923 Ga0496120_0000210 Ga0496120_0000210_43346_44728 435
153 3300048929 Ga0496126_0003093 Ga0496126_0003093_4747_6117 435
154 3300049459 Ga0495678_000221 Ga0495678_000221_6445_7815 435
155 3300049460 Ga0495682_0000001 Ga0495682_0000001_471626_472996 435
156 3300053126 Ga0500621_000002 Ga0500621_000002_491301_492671 435
157 iso_pu_bacteria 2904439833 2904445002 435
158 iso_pu_bacteria 2904530477 2904534164 435
159 iso_pu_bacteria 2904584206 2904588994 435
160 iso_pu_bacteria 2904589729 2904590525 435
161 iso_pu_bacteria 2904601388 2904603603 435
162 iso_pu_bacteria 2919079590 2919080386 435
163 3300005563 Ga0068855_100000037 Ga0068855_100000037139 436
164 3300025949 Ga0207667_10000053 Ga0207667_1000005351 436
165 3300048909 Ga0496106_0069891 Ga0496106_0069891_401_1774 436
166 3300053161 Ga0500634_0080952 Ga0500634_0080952_167_1528 436
167 iso_pu_bacteria 2595698237 2596374810 436
168 iso_pu_bacteria 2818991449 2819614309 436
169 iso_pu_bacteria 2902405164 2902408590 436
170 iso_pu_bacteria 2928125067 2928125520 436
171 3300009551 Ga0105238_10013256 Ga0105238_100132564 437
172 3300013307 Ga0157372_10238294 Ga0157372_102382941 437
173 3300025924 Ga0207694_10058419 Ga0207694_100584191 437
174 3300041405 Ga0439438_002171 Ga0439438_002171_3787_5178 437
175 3300041407 Ga0439447_002919 Ga0439447_002919_1078_2469 437
176 3300003320 rootH2_10001360 rootH2_1000136038 438
177 3300006028 Ga0070717_10019905 Ga0070717_100199052 438
178 3300006914 Ga0075436_100034253 Ga0075436_1000342533 438
179 3300009093 Ga0105240_10023311 Ga0105240_100233117 438
180 3300021361 Ga0213872_10015937 Ga0213872_100159372 438
181 3300021361 Ga0213872_10050962 Ga0213872_100509622 438
182 3300025913 Ga0207695_10001904 Ga0207695_100019042 438
183 3300039447 Ga0436361_0870387 Ga0436361_0870387_4270_5643 438
184 3300048923 Ga0496120_0000578 Ga0496120_0000578_1892_3271 438
185 iso_pu_bacteria 2818991445 2819591396 438
186 iso_pu_bacteria 2896154374 2896155392 438
187 iso_pu_bacteria 2919046199 2919046887 438
188 3300048922 Ga0496119_0001363 Ga0496119_0001363_4222_5649 439
189 3300048923 Ga0496120_0000002 Ga0496120_0000002_4229_5656 439
190 iso_pu_bacteria 2551306416 2553007837 439
191 iso_pu_bacteria 2721755523 2722882597 439
192 iso_pu_bacteria 2738541271 2738688315 439
193 iso_pu_bacteria 2738543016 2739264046 439
194 iso_pu_bacteria 2884836552 2884837200 439
195 iso_pu_bacteria 2884852848 2884853491 439
196 iso_pu_bacteria 2928130867 2928133381 439
197 iso_pu_bacteria 2765235838 2765569564 440
198 iso_pu_bacteria 8055034563 8055036488 440
199 3300025913 Ga0207695_10005294 Ga0207695_100052948 441
200 3300048924 Ga0496121_0021865 Ga0496121_0021865_212_1597 441
201 iso_pu_bacteria 2511231003 2511248934 441
202 iso_pu_bacteria 2643221609 2644062523 441
203 iso_pu_bacteria 2643221611 2644076446 441
204 iso_pu_bacteria 2738543012 2739245373 441
205 iso_pu_bacteria 2816332133 2816474738 441
206 iso_pu_bacteria 2883577096 2883581243 441
207 3300002705 JGI25156J39149_1000057 JGI25156J39149_100005738 442
208 3300002738 JGI25154J39366_1000087 JGI25154J39366_100008751 442
209 3300002741 JGI25157J39369_1000156 JGI25157J39369_100015651 442
210 3300005614 Ga0068856_100020325 Ga0068856_1000203252 442
211 3300009093 Ga0105240_10000497 Ga0105240_1000049718 442
212 3300010375 Ga0105239_10048737 Ga0105239_100487373 442
213 3300013100 Ga0157373_10047044 Ga0157373_100470442 442
214 3300025206 Ga0209435_100016 Ga0209435_100016164 442
215 3300025206 Ga0209435_100038 Ga0209435_10003846 442
216 3300025229 Ga0209147_100023 Ga0209147_100023164 442
217 3300025233 Ga0209437_100166 Ga0209437_10016625 442
218 3300025242 Ga0209258_100368 Ga0209258_10036843 442
219 3300025246 Ga0209646_1000033 Ga0209646_1000033145 442
220 3300025250 Ga0209026_1000031 Ga0209026_1000031164 442
221 3300025256 Ga0209759_1000045 Ga0209759_100004570 442
222 3300026078 Ga0207702_10054798 Ga0207702_100547982 442
223 3300048919 Ga0496116_0002478 Ga0496116_0002478_12540_13925 442
224 3300048925 Ga0496122_0000375 Ga0496122_0000375_60107_61492 442
225 3300048926 Ga0496123_0000267 Ga0496123_0000267_41566_42951 442
226 3300048928 Ga0496125_0000694 Ga0496125_0000694_1737_3119 442
227 3300048928 Ga0496125_0024649 Ga0496125_0024649_3849_5234 442
228 3300002704 JGI25155J39150_1000108 JGI25155J39150_100010823 443
229 3300002704 JGI25155J39150_1000126 JGI25155J39150_10001266 443
230 3300002704 JGI25155J39150_1000198 JGI25155J39150_100019826 443
231 3300002705 JGI25156J39149_1002477 JGI25156J39149_10024776 443
232 3300002738 JGI25154J39366_1000206 JGI25154J39366_100020631 443
233 3300003758 Ga0055532_1000016 Ga0055532_1000016280 443
234 3300025246 Ga0209646_1000093 Ga0209646_100009350 443
235 3300025256 Ga0209759_1000248 Ga0209759_100024856 443
236 3300025913 Ga0207695_10027900 Ga0207695_100279002 443
237 3300039447 Ga0436361_0433365 Ga0436361_0433365_303_1712 443
238 3300044666 Ga0466977_0000184 Ga0466977_0000184_11544_13028 443
239 3300046538 Ga0495609_0015944 Ga0495609_0015944_2061_3479 443
240 3300048921 Ga0496118_0029561 Ga0496118_0029561_884_2290 443
241 3300048924 Ga0496121_0015507 Ga0496121_0015507_5524_6915 443
242 3300048927 Ga0496124_0000383 Ga0496124_0000383_22484_23902 443
243 3300048928 Ga0496125_0067352 Ga0496125_0067352_574_1980 443
244 3300053125 Ga0500618_005493 Ga0500618_005493_98_1525 443
245 iso_pu_bacteria 2521172590 2521558457 443
246 iso_pu_bacteria 2885409591 2885415031 443
247 iso_pu_bacteria 2885409591 2885416001 443
248 iso_pu_bacteria 2909042592 2909045257 443
249 iso_pu_bacteria 8018845410 8018846692 443

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02515

CoA_transf_3

CoA-transferase family III

245

464

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5nak-assembly1.cif.gz_B pseudomonas fluorescens kynurenine 3-monooxygenase (kmo) in complex with the enzyme substrate l-kynurenine 0.8801 210 239
5yx6-assembly2.cif.gz_D crystal structure of rv3272 from m. tuberculosis orthorhombic form 0.8779 203 391
7z94-assembly1.cif.gz_A crystal structure of variovorax paradoxus indole monooxygenase (vpinda1) in complex with indole 0.8767 211 240
4bk2-assembly1.cif.gz_A-2 crystal structure of 3-hydroxybenzoate 6-hydroxylase uncovers lipid- assisted flavoprotein strategy for regioselective aromatic hydroxylation: q301e mutant 0.8765 208 240
4bjz-assembly1.cif.gz_A crystal structure of 3-hydroxybenzoate 6-hydroxylase uncovers lipid- assisted flavoprotein strategy for regioselective aromatic hydroxylation: native data 0.8758 208 240
ID Description Score Start End Superfamily
af_Q5AMS5_241_485_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.8854 205 392 3.40.50.10540
3gmbB01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8625 211 240 3.50.50.60
af_Q4V9F2_1_227_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.8498 229 392 3.40.50.10540
af_Q0D7W4_71_358_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.848 211 240 3.50.50.60
3ubmA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.8458 207 391 3.40.50.10540
ID Description Score Start End GO Terms
AF-A0A4S3LSW4-F1-model_v4 Acyl-CoA transferase 0.9729 6 366 GO:0016740
AF-A0A7Y8BCC9-F1-model_v4 deleted 0.9672 112 443
AF-A0A6J5E5I0-F1-model_v4 Formyl-CoA:oxalate CoA-transferase (EC 2.8.3.16) (L-carnitine dehydratase/bile acid-inducible protein F) 0.966 1 443 GO:0033608
AF-A0A0J6SM67-F1-model_v4 CAIB/BAIF family CoA transferase 0.9659 14 391 GO:0016740
AF-A0A4S3LSW4-F1-model_v4 Acyl-CoA transferase 0.965 6 366 GO:0016740

Feature Viewer

pLDDT pTM Quality
86.82 0.89 High
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Predicted Structure (AlphaFold2)

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