F361182

General Info

Members Datasets Scaffolds Average Seq Length
249 226 498 406

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2721755755|2723844316
Length 431
Sequence ASVLLASNGPVREESMVTMAAQIAGRFDSVPLRAQLQRVERRRKLKAFTLVLPLLLFILIAFAFPITRMMFNAVHDDTLLALMPRTMAALSGWDGKDLPDENAYAALAEDLKQAWAQRTTGAIGQRMNYQLSGVGSEVTSSARKASTLSGGPYKATMIEINPIWGQRDIWSLLKRGSSAYTAYYLLRSIDYQYDSDSKIVASPPDQSIFRDAFLRTLGISVGVTVATLLLGFPVAYLLATLPPRISNPLMIMVVLPFWTSVLVRTTAWVVLLQQHGLVNDALIALHIISQPAELIFNRLGTVVAMTHIQLPFTLLPIYSVMKTISPSHVRAARSLGAGPFYAFWKVYFPQTLSGIAAGCLLTFILCLGYYITPALVGGPSDQMIAYFIAYYTNEQLNWGMASALGFILLIATLVLYYVFNKLVGVDRIKMG

Samples

Sample ID Description Type Environment
1 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
4 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
45 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
62 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
63 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
64 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
65 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
66 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
67 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
69 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
72 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
98 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
99 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
100 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
104 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
105 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
106 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
107 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
108 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
109 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
110 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
111 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
112 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
113 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
126 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
127 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
128 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
129 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
130 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
136 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
140 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
141 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
142 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
143 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
144 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
145 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
146 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
147 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
148 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
149 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
150 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
151 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
152 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
153 2507262055 Bradyrhizobium sp. WSM1417 Isolate Nodule
154 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
155 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
156 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
157 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
158 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
159 2515154112 Bradyrhizobium sp. WSM4349 Isolate Nodule
160 2516143018 Ensifer sp. BR816 Isolate Nodule
161 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
162 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
163 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
164 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
165 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
166 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
167 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
168 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
169 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
170 2842038055 Bradyrhizobium centrosematis SEMIA 424 Isolate Nodule
171 2842045827 Bradyrhizobium centrosematis SEMIA 431 Isolate Nodule
172 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
173 2857367948 Mesorhizobium sp. M7A.F.Ca.US.002.01.1.1 Isolate Nodule
174 2871451962 Mesorhizobium sp. M7A.F.Ca.US.006.01.1.1 Isolate Nodule
175 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
176 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
177 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
178 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
179 2879127579 Bradyrhizobium canariense UBMA052 Isolate Nodule
180 2879142872 Bradyrhizobium canariense UBMA061 Isolate Nodule
181 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
182 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
183 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
184 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
185 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
186 2924733363 Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1 Isolate Nodule
187 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
188 2932801729 Bradyrhizobium sp. S3.3.6 Isolate Nodule
189 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
190 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
191 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
192 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
193 2935908558 Bradyrhizobium sp. F1.1.1 Isolate Nodule
194 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
195 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
196 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
197 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
198 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
199 2935959822 Bradyrhizobium sp. F1.4.3 Isolate Nodule
200 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
201 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
202 2965062239 Mesorhizobium sp. M1A.F.Ca.ET.072.01.1.1 Isolate Nodule
203 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
204 2977957713 Mesorhizobium sp. M7A.F.Ca.US.001.02.1.1 Isolate Nodule
205 2979742915 Mesorhizobium sp. M2A.F.Ca.ET.046.02.1.1 Isolate Nodule
206 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
207 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
208 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
209 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
210 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
211 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
212 8016566248 Bradyrhizobium sp. LM3.2 Isolate Nodule
213 8016575299 Bradyrhizobium sp. LM2.9 Isolate Nodule
214 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
215 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
216 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
217 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
218 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule
219 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
220 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
221 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
222 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
223 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
224 8019678201 Bradyrhizobium sp. GM0.4 Isolate Nodule
225 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule
226 8057160832 Larsenimonas rhizosphaerae GH2-1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 69.08
Metatranscriptomes 0
Isolates 30.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.65
Nodule 29.32
Rhizoplane 1.2
Rhizosphere 52.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1000104 3300002987 Bacteria 40316
2 JGI25160J50197_1000060 3300003354 Bacteria 116870
3 JGI25161J50226_1001474 3300003374 Bacteria 7043
4 Ga0055524_1003052 3300003775 Bacteria 8289
5 Ga0055531_10000611 3300003794 Bacteria 30976
6 Ga0055531_10003194 3300003794 Bacteria 10521
7 Ga0055531_10005937 3300003794 Bacteria 7023
8 Ga0055543_1000217 3300004625 Bacteria 46134
9 Ga0065165_1000160 3300005262 Bacteria 116908
10 Ga0065712_10008971 3300005290 Bacteria 2976
11 Ga0070676_10037016 3300005328 Bacteria 2812
12 Ga0070683_100085150 3300005329 Bacteria 2963
13 Ga0070690_100035869 3300005330 Bacteria 3114
14 Ga0070670_100191729 3300005331 Bacteria 1775
15 Ga0070677_10011992 3300005333 Bacteria 2999
16 Ga0068868_100125349 3300005338 Bacteria 2098
17 Ga0070660_100303728 3300005339 Bacteria 1309
18 Ga0070661_100098563 3300005344 Bacteria 2171
19 Ga0070668_100039910 3300005347 Bacteria 3591
20 Ga0070669_100239743 3300005353 Bacteria 1440
21 Ga0070675_100048984 3300005354 Bacteria 3466
22 Ga0070674_100001707 3300005356 Bacteria 11902
23 Ga0070674_100040146 3300005356 Bacteria 3164
24 Ga0070673_100036783 3300005364 Bacteria 3725
25 Ga0070688_100024307 3300005365 Bacteria 3573
26 Ga0070659_100080922 3300005366 Bacteria 2594
27 Ga0070667_100033470 3300005367 Bacteria 4296
28 Ga0070709_10041964 3300005434 Bacteria 2822
29 Ga0070663_100031184 3300005455 Bacteria 3662
30 Ga0070662_100041193 3300005457 Bacteria 3293
31 Ga0070685_10147658 3300005466 Bacteria 1487
32 Ga0070706_100072500 3300005467 Bacteria 3187
33 Ga0070707_100019601 3300005468 Bacteria 6374
34 Ga0070698_100126091 3300005471 Bacteria 2517
35 Ga0068853_100101715 3300005539 Bacteria 2542
36 Ga0068853_100200361 3300005539 Bacteria 1816
37 Ga0070665_100057208 3300005548 Bacteria 3910
38 Ga0070664_100195743 3300005564 Bacteria 1802
39 Ga0068857_100131653 3300005577 Bacteria 2256
40 Ga0068859_100209631 3300005617 Bacteria 2035
41 Ga0068864_100018329 3300005618 Bacteria 5847
42 Ga0068861_100031991 3300005719 Bacteria 3870
43 Ga0068858_100268628 3300005842 Bacteria 1622
44 Ga0068860_100090001 3300005843 Bacteria 2922
45 Ga0068860_100310075 3300005843 Bacteria 1547
46 Ga0068862_100011252 3300005844 Bacteria 7388
47 Ga0068862_100226383 3300005844 Bacteria 1695
48 Ga0081538_10018398 3300005981 Bacteria 5248
49 Ga0081539_10026455 3300005985 Bacteria 3702
50 Ga0070712_100056244 3300006175 Bacteria 2759
51 Ga0075362_10002419 3300006177 Bacteria 6264
52 Ga0075367_10144634 3300006178 Bacteria 1474
53 Ga0068871_100069054 3300006358 Bacteria 2901
54 Ga0075431_100005629 3300006847 Bacteria 12375
55 Ga0075429_100017182 3300006880 Bacteria 6256
56 Ga0075429_100336598 3300006880 Bacteria 1321
57 Ga0097620_100209640 3300006931 Bacteria 2035
58 Ga0099823_1025519 3300006944 Bacteria 5282
59 Ga0111539_10000375 3300009094 Bacteria 55326
60 Ga0114129_10009806 3300009147 Bacteria 13658
61 Ga0114129_10360484 3300009147 Bacteria 1924
62 Ga0105249_10007097 3300009553 Bacteria 9780
63 Ga0105249_10167677 3300009553 Bacteria 2127
64 Ga0171463_1002 3300013249 Bacteria 1274851
65 Ga0157374_10018084 3300013296 Bacteria 6217
66 Ga0157378_10046210 3300013297 Bacteria 3871
67 Ga0163163_10018436 3300014325 Bacteria 6534
68 Ga0157380_10048853 3300014326 Bacteria 3334
69 Ga0157376_10009931 3300014969 Bacteria 6942
70 Ga0183363_1092 3300015690 Bacteria 26253
71 Ga0214544_1005407 3300021320 Bacteria 24758
72 Ga0214542_1003483 3300021321 Bacteria 32046
73 Ga0214543_1003186 3300021327 Bacteria 32047
74 Ga0209436_100055 3300025208 Bacteria 61770
75 Ga0209130_1000136 3300025284 Bacteria 116996
76 Ga0209676_1001189 3300025292 Bacteria 28019
77 Ga0209758_1000284 3300025297 Bacteria 100315
78 Ga0209050_1001142 3300025298 Bacteria 31942
79 Ga0209050_1006573 3300025298 Bacteria 6831
80 Ga0209256_1003289 3300025299 Bacteria 11527
81 Ga0207426_1000253 3300025302 Bacteria 116996
82 Ga0209051_1016251 3300025303 Bacteria 3381
83 Ga0209257_1000521 3300025304 Bacteria 66885
84 Ga0209257_1000631 3300025304 Bacteria 56521
85 Ga0207697_10002159 3300025315 Bacteria 10305
86 Ga0207682_10012591 3300025893 Bacteria 3300
87 Ga0207645_10034395 3300025907 Bacteria 3257
88 Ga0207684_10082833 3300025910 Bacteria 2732
89 Ga0207693_10067193 3300025915 Bacteria 2807
90 Ga0207657_10200513 3300025919 Bacteria 1605
91 Ga0207649_10214823 3300025920 Bacteria 1366
92 Ga0207646_10016775 3300025922 Bacteria 6870
93 Ga0207650_10059722 3300025925 Bacteria 2843
94 Ga0207659_10047298 3300025926 Bacteria 3042
95 Ga0207706_10013647 3300025933 Bacteria 7378
96 Ga0207669_10011043 3300025937 Bacteria 4376
97 Ga0207669_10028505 3300025937 Bacteria 3073
98 Ga0207689_10025723 3300025942 Bacteria 4930
99 Ga0207661_10063936 3300025944 Bacteria 2982
100 Ga0207679_10022816 3300025945 Bacteria 4267
101 Ga0207667_10171746 3300025949 Bacteria 2228
102 Ga0207668_10045799 3300025972 Bacteria 2985
103 Ga0207639_10165414 3300026041 Bacteria 1868
104 Ga0207648_10000674 3300026089 Bacteria 38261
105 Ga0207676_10086943 3300026095 Bacteria 2555
106 Ga0207674_10008849 3300026116 Bacteria 11582
107 Ga0207675_100004352 3300026118 Bacteria 13687
108 Ga0207675_100037694 3300026118 Bacteria 4509
109 Ga0207683_10008001 3300026121 Bacteria 9044
110 Ga0209389_1000087 3300027296 Bacteria 84576
111 Ga0209389_1004232 3300027296 Bacteria 11874
112 Ga0209489_100310 3300027361 Bacteria 85749
113 Ga0209700_100327 3300027363 Bacteria 85748
114 Ga0207428_10000057 3300027907 Bacteria 158615
115 Ga0268266_10075032 3300028379 Bacteria 2937
116 Ga0268265_10009208 3300028380 Bacteria 6673
117 Ga0268265_10086687 3300028380 Bacteria 2489
118 Ga0265339_10047273 3300031249 Bacteria 2363
119 Ga0265331_10001082 3300031250 Bacteria 20989
120 Ga0265327_10010739 3300031251 Bacteria 6391
121 Ga0307408_100022655 3300031548 Bacteria 4271
122 Ga0265313_10006037 3300031595 Bacteria 8738
123 Ga0265314_10091341 3300031711 Bacteria 1982
124 Ga0307413_10021759 3300031824 Bacteria 3441
125 Ga0307409_100071710 3300031995 Bacteria 2755
126 Ga0307411_10002121 3300032005 Bacteria 8577
127 Ga0316574_0044375 3300035398 Bacteria 2750
128 Ga0373927_0138550 3300035695 Bacteria 1591
129 Ga0451576_0411239 3300045051 Bacteria 1419
130 Ga0496102_0039975 3300048905 Bacteria 4241
131 Ga0496106_0144583 3300048909 Bacteria 1872
132 Ga0496114_0104434 3300048917 Bacteria 2423
133 Ga0501032_0193229 3300049569 Bacteria 1330
134 Ga0501033_0056299 3300049570 Bacteria 2907
135 Ga0501034_0006036 3300049571 Bacteria 13091
136 Ga0501034_0271200 3300049571 Bacteria 1638
137 Ga0501036_0049975 3300049572 Bacteria 3542
138 Ga0501038_0039426 3300049574 Bacteria 4132
139 Ga0501038_0072249 3300049574 Bacteria 2924
140 Ga0501043_0218715 3300049579 Bacteria 1474
141 Ga0501047_0027796 3300049581 Bacteria 5450
142 Ga0501067_0018528 3300049583 Bacteria 3856
143 Ga0501073_0002330 3300049589 Bacteria 14211
144 Ga0501073_0023504 3300049589 Bacteria 4425
145 Ga0501075_0053578 3300049591 Bacteria 3034
146 Ga0501076_0128219 3300049592 Bacteria 2057
147 Ga0501080_0023023 3300049742 Bacteria 5777
148 Ga0501081_0009073 3300049743 Bacteria 6468
149 Ga0501083_0036362 3300049744 Bacteria 3359
150 Ga0501044_0019839 3300049823 Bacteria 7180
151 nmdc:mga03683_4405_c1 3300050489 Bacteria 4670
152 nmdc:mga03683_68551_c1 3300050489 Bacteria 1512
153 nmdc:mga05p37_126121_c1 3300050507 Bacteria 3143
154 nmdc:mga09592_298903_c1 3300050508 Bacteria 1396
155 nmdc:mga09592_66957_c1 3300050508 Bacteria 3045
156 nmdc:mga0qj67_112890_c1 3300050509 Bacteria 2194
157 nmdc:mga06r32_50675_c1 3300050510 Bacteria 3971
158 nmdc:mga08y16_60_c1 3300050511 Bacteria 93360
159 Ga0500651_0005861 3300053093 Bacteria 7041
160 Ga0500566_0049834 3300053094 Bacteria 2399
161 Ga0500641_0028127 3300053096 Bacteria 2193
162 Ga0500555_009350 3300053103 Bacteria 2803
163 Ga0500595_001648 3300053119 Bacteria 11732
164 Ga0500642_0002460 3300053130 Bacteria 5442
165 Ga0500658_0021391 3300053134 Bacteria 2449
166 Ga0500568_0024655 3300053139 Bacteria 2545
167 Ga0500588_0040714 3300053146 Bacteria 1398
168 Ga0500616_0001316 3300053153 Bacteria 24522
169 Ga0501084_0017410 3300054114 Bacteria 5974
170 Ga0501084_0111268 3300054114 Bacteria 2302
171 Ga0590071_002176 3300059421 Bacteria 4987
172 Ga0501082_0049714 3300060353 Bacteria 3616
173 2723844316 2721755755 Bacteria 8322773
174 2507506380 2507262055 Bacteria 8048963
175 2508540614 2508501009 Bacteria 7784016
176 2508696640 2508501042 Bacteria 8719808
177 2513614561 2513237090 Bacteria 7096802
178 2513629113 2513237092 Bacteria 8341956
179 2514590386 2513237351 Bacteria 6968952
180 2515631171 2515154112 Bacteria 8294334
181 2516206406 2516143018 Bacteria 6951533
182 2617354464 2617270735 Bacteria 9163226
183 2644498015 2643221689 Bacteria 6042950
184 2756671301 2756170246 Bacteria 7451806
185 2776268256 2775506902 Bacteria 6208009
186 2776281161 2775506904 Bacteria 5954060
187 2824601301 2824600985 Bacteria 8488197
188 2824739846 2824732956 Bacteria 7810675
189 2824781378 2824773399 Bacteria 8360218
190 2841976948 2841974524 Bacteria 8931498
191 2842045756 2842038055 Bacteria 8002051
192 2842053441 2842045827 Bacteria 8006841
193 2855877907 2855872281 Bacteria 6964271
194 2857372844 2857367948 Bacteria 6965560
195 2871454000 2871451962 Bacteria 7336357
196 2874620875 2874620515 Bacteria 8290088
197 2876761323 2876761206 Bacteria 10111113
198 2878745960 2878738818 Bacteria 7136951
199 2879083127 2879083081 Bacteria 8587928
200 2879128147 2879127579 Bacteria 8294491
201 2879143479 2879142872 Bacteria 8267021
202 2881670673 2881665667 Bacteria 8175609
203 2883295827 2883291878 Bacteria 5894118
204 2883358616 2883354860 Bacteria 5865246
205 2885355436 2885350715 Bacteria 6787678
206 2922363844 2922361189 Bacteria 7436256
207 2924740197 2924733363 Bacteria 7574837
208 2924784102 2924776078 Bacteria 7492003
209 2932806022 2932801729 Bacteria 7987968
210 2935616500 2935608549 Bacteria 8203142
211 2935711268 2935703347 Bacteria 10242284
212 2935784827 2935777560 Bacteria 8077691
213 2935846964 2935837841 Bacteria 9454360
214 2935916371 2935908558 Bacteria 8568796
215 2935925700 2935916978 Bacteria 9113783
216 2935933778 2935926038 Bacteria 8601059
217 2935942394 2935934488 Bacteria 8602579
218 2935950859 2935942939 Bacteria 8599779
219 2935959295 2935951376 Bacteria 8602333
220 2935967269 2935959822 Bacteria 7869783
221 2935975568 2935967501 Bacteria 8603075
222 2936063199 2936055302 Bacteria 8785755
223 2965062552 2965062239 Bacteria 7412989
224 2977872549 2977864932 Bacteria 7534097
225 2977962232 2977957713 Bacteria 6877875
226 2979744176 2979742915 Bacteria 7301278
227 8006972208 8006964411 Bacteria 8966052
228 8016522613 8016522445 Bacteria 8156687
229 8016531032 8016530956 Bacteria 8155261
230 8016544400 8016539877 Bacteria 8155419
231 8016549002 8016548790 Bacteria 8155074
232 8016565911 8016557553 Bacteria 8154380
233 8016575005 8016566248 Bacteria 8158151
234 8016575422 8016575299 Bacteria 8154085
235 8016595423 8016595262 Bacteria 8149947
236 8016612786 8016603502 Bacteria 8731218
237 8016613193 8016613128 Bacteria 8794220
238 8016634288 8016630954 Bacteria 9217207
239 8019530230 8019530166 Bacteria 8155624
240 8019564505 8019555841 Bacteria 9642137
241 8019564631 8019555841 Bacteria 9642137
242 8019574591 8019565922 Bacteria 9639779
243 8019574717 8019565922 Bacteria 9639779
244 8019585519 8019576017 Bacteria 10049540
245 8019597974 8019597564 Bacteria 10041141
246 8019610409 8019608314 Bacteria 10042931
247 8019686739 8019678201 Bacteria 8863603
248 8056678035 8056673599 Bacteria 7871253
249 8057163565 8057160832 Bacteria 3268302
250 JGI25159J45721_1000104
251 JGI25160J50197_1000060
252 JGI25161J50226_1001474
253 Ga0055524_1003052
254 Ga0055531_10000611
255 Ga0055531_10003194
256 Ga0055531_10005937
257 Ga0055543_1000217
258 Ga0065165_1000160
259 Ga0065712_10008971
260 Ga0070676_10037016
261 Ga0070683_100085150
262 Ga0070690_100035869
263 Ga0070670_100191729
264 Ga0070677_10011992
265 Ga0068868_100125349
266 Ga0070660_100303728
267 Ga0070661_100098563
268 Ga0070668_100039910
269 Ga0070669_100239743
270 Ga0070675_100048984
271 Ga0070674_100001707
272 Ga0070674_100040146
273 Ga0070673_100036783
274 Ga0070688_100024307
275 Ga0070659_100080922
276 Ga0070667_100033470
277 Ga0070709_10041964
278 Ga0070663_100031184
279 Ga0070662_100041193
280 Ga0070685_10147658
281 Ga0070706_100072500
282 Ga0070707_100019601
283 Ga0070698_100126091
284 Ga0068853_100101715
285 Ga0068853_100200361
286 Ga0070665_100057208
287 Ga0070664_100195743
288 Ga0068857_100131653
289 Ga0068859_100209631
290 Ga0068864_100018329
291 Ga0068861_100031991
292 Ga0068858_100268628
293 Ga0068860_100090001
294 Ga0068860_100310075
295 Ga0068862_100011252
296 Ga0068862_100226383
297 Ga0081538_10018398
298 Ga0081539_10026455
299 Ga0070712_100056244
300 Ga0075362_10002419
301 Ga0075367_10144634
302 Ga0068871_100069054
303 Ga0075431_100005629
304 Ga0075429_100017182
305 Ga0075429_100336598
306 Ga0097620_100209640
307 Ga0099823_1025519
308 Ga0111539_10000375
309 Ga0114129_10009806
310 Ga0114129_10360484
311 Ga0105249_10007097
312 Ga0105249_10167677
313 Ga0171463_1002
314 Ga0157374_10018084
315 Ga0157378_10046210
316 Ga0163163_10018436
317 Ga0157380_10048853
318 Ga0157376_10009931
319 Ga0183363_1092
320 Ga0214544_1005407
321 Ga0214542_1003483
322 Ga0214543_1003186
323 Ga0209436_100055
324 Ga0209130_1000136
325 Ga0209676_1001189
326 Ga0209758_1000284
327 Ga0209050_1001142
328 Ga0209050_1006573
329 Ga0209256_1003289
330 Ga0207426_1000253
331 Ga0209051_1016251
332 Ga0209257_1000521
333 Ga0209257_1000631
334 Ga0207697_10002159
335 Ga0207682_10012591
336 Ga0207645_10034395
337 Ga0207684_10082833
338 Ga0207693_10067193
339 Ga0207657_10200513
340 Ga0207649_10214823
341 Ga0207646_10016775
342 Ga0207650_10059722
343 Ga0207659_10047298
344 Ga0207706_10013647
345 Ga0207669_10011043
346 Ga0207669_10028505
347 Ga0207689_10025723
348 Ga0207661_10063936
349 Ga0207679_10022816
350 Ga0207667_10171746
351 Ga0207668_10045799
352 Ga0207639_10165414
353 Ga0207648_10000674
354 Ga0207676_10086943
355 Ga0207674_10008849
356 Ga0207675_100004352
357 Ga0207675_100037694
358 Ga0207683_10008001
359 Ga0209389_1000087
360 Ga0209389_1004232
361 Ga0209489_100310
362 Ga0209700_100327
363 Ga0207428_10000057
364 Ga0268266_10075032
365 Ga0268265_10009208
366 Ga0268265_10086687
367 Ga0265339_10047273
368 Ga0265331_10001082
369 Ga0265327_10010739
370 Ga0307408_100022655
371 Ga0265313_10006037
372 Ga0265314_10091341
373 Ga0307413_10021759
374 Ga0307409_100071710
375 Ga0307411_10002121
376 Ga0316574_0044375
377 Ga0373927_0138550
378 Ga0451576_0411239
379 Ga0496102_0039975
380 Ga0496106_0144583
381 Ga0496114_0104434
382 Ga0501032_0193229
383 Ga0501033_0056299
384 Ga0501034_0006036
385 Ga0501034_0271200
386 Ga0501036_0049975
387 Ga0501038_0039426
388 Ga0501038_0072249
389 Ga0501043_0218715
390 Ga0501047_0027796
391 Ga0501067_0018528
392 Ga0501073_0002330
393 Ga0501073_0023504
394 Ga0501075_0053578
395 Ga0501076_0128219
396 Ga0501080_0023023
397 Ga0501081_0009073
398 Ga0501083_0036362
399 Ga0501044_0019839
400 nmdc:mga03683_4405_c1
401 nmdc:mga03683_68551_c1
402 nmdc:mga05p37_126121_c1
403 nmdc:mga09592_298903_c1
404 nmdc:mga09592_66957_c1
405 nmdc:mga0qj67_112890_c1
406 nmdc:mga06r32_50675_c1
407 nmdc:mga08y16_60_c1
408 Ga0500651_0005861
409 Ga0500566_0049834
410 Ga0500641_0028127
411 Ga0500555_009350
412 Ga0500595_001648
413 Ga0500642_0002460
414 Ga0500658_0021391
415 Ga0500568_0024655
416 Ga0500588_0040714
417 Ga0500616_0001316
418 Ga0501084_0017410
419 Ga0501084_0111268
420 Ga0590071_002176
421 Ga0501082_0049714
422 2723844316
423 2507506380
424 2508540614
425 2508696640
426 2513614561
427 2513629113
428 2514590386
429 2515631171
430 2516206406
431 2617354464
432 2644498015
433 2756671301
434 2776268256
435 2776281161
436 2824601301
437 2824739846
438 2824781378
439 2841976948
440 2842045756
441 2842053441
442 2855877907
443 2857372844
444 2871454000
445 2874620875
446 2876761323
447 2878745960
448 2879083127
449 2879128147
450 2879143479
451 2881670673
452 2883295827
453 2883358616
454 2885355436
455 2922363844
456 2924740197
457 2924784102
458 2932806022
459 2935616500
460 2935711268
461 2935784827
462 2935846964
463 2935916371
464 2935925700
465 2935933778
466 2935942394
467 2935950859
468 2935959295
469 2935967269
470 2935975568
471 2936063199
472 2965062552
473 2977872549
474 2977962232
475 2979744176
476 8006972208
477 8016522613
478 8016531032
479 8016544400
480 8016549002
481 8016565911
482 8016575005
483 8016575422
484 8016595423
485 8016612786
486 8016613193
487 8016634288
488 8019530230
489 8019564505
490 8019564631
491 8019574591
492 8019574717
493 8019585519
494 8019597974
495 8019610409
496 8019686739
497 8056678035
498 8057163565

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

185

425

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
2onk-assembly2.cif.gz_I abc transporter modbc in complex with its binding protein moda 0.8751 194 408
3d31-assembly1.cif.gz_C modbc from methanosarcina acetivorans 0.8658 194 403
2r6g-assembly1.cif.gz_F the crystal structure of the e. coli maltose transporter 0.8441 186 399
4jbw-assembly2.cif.gz_H crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.84 193 404
4xtc-assembly1.cif.gz_M crystal structure of bacterial alginate abc transporter in complex with alginate pentasaccharide-bound periplasmic protein 0.8333 193 411
ID Description Score Start End Superfamily
af_P0AFR7_53_289_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.906 193 408 1.10.3720.10
af_O53484_49_294_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8982 193 410 1.10.3720.10
af_P71745_27_277_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8934 193 412 1.10.3720.10
af_P71896_49_286_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.887 193 412 1.10.3720.10
af_P71746_10_267_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8781 193 410 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A6I2M2N4-F1-model_v4 ABC transporter permease subunit 0.9756 193 410 GO:0005886
GO:0055085
AF-A0A0F8WG49-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.9741 194 415 GO:0005886
GO:0055085
AF-A0A0D7P0M6-F1-model_v4 ABC transporter permease 0.9737 193 413 GO:0005886
GO:0055085
AF-A0A420Z3M1-F1-model_v4 deleted 0.9726 193 412
AF-A0A254QKV9-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.9711 193 408 GO:0005886
GO:0055085

Map