F361155

General Info

Members Datasets Scaffolds Average Seq Length
249 177 498 263

Family's Representative Sequence

Representative Sequence 3300059605|Ga0587106_000547|Ga0587106_000547_1342_2121
Length 259
Sequence MTDPILQISRLNKSFGPVHVLRDVDLNVYPGEVTALVGDNGAGKSTLVKCIAGIHGIDSGEIRFEGKPVTLSDPRAATGLGIEFVYQDLALADNLDITQNMFLGREIKRLGAFLADGEMEKKARETLAGLSVRTVSSVRQKVASLSGGQRQTVAIAKAVLWNSKVVVLDEPTAALGVAQTRQVLDLVRRLADQGRGVVLISHNMNDVMEVADRVVALYLGRVAAEVKTEDSSTTQIVELITAGRSGDIGLAPSAANQSI

Samples

Sample ID Description Type Environment
1 3300059605 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 71R_SD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
4 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
5 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
26 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
27 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
28 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
29 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
48 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
49 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
50 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
51 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
52 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
53 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
54 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
55 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
56 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
57 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
58 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
59 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
60 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
61 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
62 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
63 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
64 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
65 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
66 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
67 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
68 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
69 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
70 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
71 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
72 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
73 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
74 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
75 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
76 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
77 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
78 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
79 3300042117 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0415F_E14_082316_1937 Metagenome Rhizosphere
80 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
81 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
82 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
83 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
84 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
85 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
86 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
87 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
88 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
91 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
92 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
93 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
94 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
95 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
96 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
97 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
98 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
99 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
100 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
101 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
102 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
103 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
104 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
105 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
108 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
113 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
117 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
118 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
119 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
135 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
149 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
150 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
151 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
152 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
156 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
157 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
158 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
159 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
160 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
161 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
162 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
163 3300059642 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 10R_AW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
164 3300059652 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 72R_SD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
165 3300060344 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 36R_AW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
166 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
167 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
168 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
169 2558860280 Kutzneria sp. 744 Isolate Unclassified
170 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
171 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
172 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
173 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
174 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
175 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
176 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
177 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.97
Metatranscriptomes 4.42
Isolates 3.61

Biome Distribution

Category Percentage (%)
Aerial Root 0.8
Bulb 0
Endosphere 7.63
Nodule 0
Rhizoplane 6.43
Rhizosphere 79.52
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0587106_000547 3300059605 Bacteria 2735
2 Ga0070658_10010312 3300005327 Bacteria 7498
3 Ga0070658_10138014 3300005327 Bacteria 2036
4 Ga0070709_10329817 3300005434 Bacteria 1122
5 Ga0070663_100585285 3300005455 Bacteria 937
6 Ga0070662_100004595 3300005457 Bacteria 8741
7 Ga0070681_10164712 3300005458 Bacteria 2140
8 Ga0070679_100030119 3300005530 Bacteria 5357
9 Ga0070679_100211629 3300005530 Bacteria 1902
10 Ga0070684_100695246 3300005535 Bacteria 948
11 Ga0068855_100119832 3300005563 Bacteria 3012
12 Ga0068852_100120097 3300005616 Bacteria 2404
13 Ga0068852_100488429 3300005616 Bacteria 1225
14 Ga0081455_10012457 3300005937 Bacteria 8485
15 Ga0081455_10053136 3300005937 Bacteria 3463
16 Ga0081538_10010497 3300005981 Bacteria 7594
17 Ga0081538_10101731 3300005981 Bacteria 1445
18 Ga0081540_1027875 3300005983 Bacteria 3188
19 Ga0081539_10003861 3300005985 Bacteria 17561
20 Ga0075365_10045000 3300006038 Bacteria 2894
21 Ga0075365_10318040 3300006038 Bacteria 1096
22 Ga0075368_10005569 3300006042 Bacteria 4339
23 Ga0075368_10120405 3300006042 Bacteria 1087
24 Ga0075363_100016371 3300006048 Bacteria 3662
25 Ga0075364_10004230 3300006051 Bacteria 8241
26 Ga0075364_10008529 3300006051 Bacteria 6132
27 Ga0075370_10077754 3300006353 Bacteria 1904
28 Ga0075370_10134527 3300006353 Bacteria 1444
29 Ga0111539_10420011 3300009094 Bacteria 1558
30 Ga0105245_10009527 3300009098 Bacteria 8468
31 Ga0114129_10445242 3300009147 Bacteria 1700
32 Ga0105241_10266654 3300009174 Bacteria 1457
33 Ga0105242_10076610 3300009176 Bacteria 2788
34 Ga0105238_10026007 3300009551 Bacteria 5965
35 Ga0157372_10000022 3300013307 Bacteria 206038
36 Ga0157375_10922221 3300013308 Bacteria 1016
37 Ga0206353_11665632 3300020082 Bacteria 1919
38 Ga0207688_10153646 3300025901 Bacteria 1361
39 Ga0207647_10046062 3300025904 Bacteria 2718
40 Ga0207705_10032367 3300025909 Bacteria 3736
41 Ga0207705_10239339 3300025909 Bacteria 1382
42 Ga0207654_10426744 3300025911 Bacteria 926
43 Ga0207707_10124850 3300025912 Bacteria 2251
44 Ga0207671_10333437 3300025914 Bacteria 1201
45 Ga0207660_10050610 3300025917 Bacteria 2951
46 Ga0207660_10294726 3300025917 Bacteria 1290
47 Ga0207657_10098765 3300025919 Bacteria 2426
48 Ga0207652_10015367 3300025921 Bacteria 6217
49 Ga0207687_10007847 3300025927 Bacteria 6997
50 Ga0207664_10037412 3300025929 Bacteria 3755
51 Ga0207706_10044599 3300025933 Bacteria 3930
52 Ga0207686_10216757 3300025934 Bacteria 1379
53 Ga0207661_10677518 3300025944 Bacteria 948
54 Ga0207667_10247123 3300025949 Bacteria 1825
55 Ga0207639_10034116 3300026041 Bacteria 3759
56 Ga0207675_100001894 3300026118 Bacteria 20917
57 Ga0207698_10477199 3300026142 Bacteria 1209
58 Ga0265334_10000455 3300028573 Bacteria 21307
59 Ga0307511_10000336 3300030521 Bacteria 50015
60 Ga0307408_100029179 3300031548 Bacteria 3819
61 Ga0307413_10080995 3300031824 Bacteria 2080
62 Ga0307410_10013404 3300031852 Bacteria 4782
63 Ga0307406_10010123 3300031901 Bacteria 5312
64 Ga0307407_10000418 3300031903 Bacteria 12976
65 Ga0307412_10134019 3300031911 Bacteria 1804
66 Ga0307409_100000662 3300031995 Bacteria 15256
67 Ga0307409_100024979 3300031995 Bacteria 4180
68 Ga0307409_100051864 3300031995 Bacteria 3142
69 Ga0307409_100166184 3300031995 Bacteria 1936
70 Ga0307416_100078621 3300032002 Bacteria 2776
71 Ga0307416_100125076 3300032002 Bacteria 2301
72 Ga0307414_10323109 3300032004 Bacteria 1314
73 Ga0307411_10016785 3300032005 Bacteria 4152
74 Ga0307415_100000879 3300032126 Bacteria 13744
75 Ga0307415_100013199 3300032126 Bacteria 4814
76 Ga0307415_100281121 3300032126 Bacteria 1368
77 Ga0307415_100348531 3300032126 Bacteria 1245
78 Ga0373933_0312539 3300035724 Bacteria 1018
79 Ga0373937_0010141 3300036401 Bacteria 8221
80 Ga0395900_0031589 3300037418 Bacteria 5443
81 Ga0439438_024582 3300041405 Bacteria 1648
82 Ga0451797_0006947 3300041453 Bacteria 4491
83 Ga0451807_0364074 3300041486 Bacteria 1245
84 Ga0451833_0928081 3300041491 Bacteria 1562
85 Ga0451837_1491930 3300041494 Bacteria 1152
86 Ga0451843_1497221 3300041509 Bacteria 3618
87 Ga0451853_1593044 3300041512 Bacteria 1229
88 Ga0439433_0005073 3300041999 Bacteria 2827
89 Ga0439448_0028213 3300042005 Bacteria 1771
90 Ga0439449_0009604 3300042007 Bacteria 3661
91 Ga0439450_009641 3300042008 Bacteria 1840
92 Ga0439451_011179 3300042009 Bacteria 1811
93 Ga0439455_0020623 3300042012 Bacteria 1564
94 Ga0439456_024176 3300042013 Bacteria 1288
95 Ga0439457_000441 3300042014 Bacteria 11973
96 Ga0439463_010222 3300042016 Bacteria 2306
97 Ga0450913_000375 3300042117 Bacteria 1794
98 Ga0450900_006062 3300042136 Bacteria 1450
99 Ga0439464_0000511 3300042439 Bacteria 7948
100 Ga0450916_013231 3300042530 Bacteria 1061
101 Ga0466961_0028346 3300044693 Bacteria 3600
102 Ga0466961_0134251 3300044693 Bacteria 1551
103 Ga0466961_0172492 3300044693 Bacteria 1345
104 Ga0466961_0308179 3300044693 Bacteria 966
105 Ga0466963_0241971 3300044694 Bacteria 1265
106 Ga0466964_0031758 3300044706 Bacteria 2096
107 Ga0466970_0039599 3300044765 Bacteria 2501
108 Ga0466970_0050645 3300044765 Bacteria 2215
109 Ga0466970_0122689 3300044765 Bacteria 1424
110 Ga0466957_0079587 3300044842 Bacteria 2039
111 Ga0466957_0231908 3300044842 Bacteria 1222
112 Ga0466960_0012762 3300044901 Bacteria 3554
113 Ga0466959_0012850 3300045049 Bacteria 6059
114 Ga0466959_0081086 3300045049 Bacteria 2338
115 Ga0466958_0139014 3300045836 Bacteria 1528
116 Ga0466958_0258585 3300045836 Bacteria 1114
117 Ga0466958_0289724 3300045836 Bacteria 1050
118 Ga0466967_0001180 3300045976 Bacteria 14656
119 Ga0466967_0003514 3300045976 Bacteria 10245
120 Ga0466967_0006894 3300045976 Bacteria 8114
121 Ga0466967_0032966 3300045976 Bacteria 4380
122 Ga0466967_0061366 3300045976 Bacteria 3335
123 Ga0466967_0522491 3300045976 Bacteria 1166
124 Ga0466967_0597193 3300045976 Bacteria 1089
125 Ga0466967_0601914 3300045976 Bacteria 1085
126 Ga0495651_0024138 3300046462 Bacteria 4730
127 Ga0495607_0077025 3300046501 Bacteria 1843
128 Ga0495608_0006171 3300046511 Bacteria 8512
129 Ga0495618_0187688 3300046514 Bacteria 1312
130 Ga0495663_0030910 3300046525 Bacteria 1589
131 Ga0495652_0478075 3300046529 Bacteria 868
132 Ga0495609_0161682 3300046538 Bacteria 949
133 Ga0495657_0010435 3300046675 Bacteria 6989
134 Ga0495669_0082115 3300046684 Bacteria 1480
135 Ga0495680_0007370 3300047322 Bacteria 10096
136 Ga0495680_0257502 3300047322 Bacteria 1235
137 Ga0495683_0000720 3300047323 Bacteria 24107
138 Ga0495675_0047019 3300047444 Bacteria 2746
139 Ga0495677_0026550 3300047445 Bacteria 2101
140 Ga0496101_0245198 3300048904 Bacteria 1395
141 Ga0496102_0004469 3300048905 Bacteria 11799
142 Ga0496104_0008388 3300048907 Bacteria 9185
143 Ga0496107_0178449 3300048910 Bacteria 1577
144 Ga0496108_0004408 3300048911 Bacteria 11325
145 Ga0496109_0033029 3300048912 Bacteria 4654
146 Ga0496110_0004828 3300048913 Bacteria 10504
147 Ga0496110_0050907 3300048913 Bacteria 3639
148 Ga0496111_0001458 3300048914 Bacteria 13525
149 Ga0496112_0431585 3300048915 Bacteria 1256
150 Ga0496114_0252233 3300048917 Bacteria 1553
151 Ga0496114_0270226 3300048917 Bacteria 1498
152 Ga0496114_0368790 3300048917 Bacteria 1270
153 Ga0496115_0249922 3300048918 Bacteria 1460
154 Ga0496122_0055765 3300048925 Bacteria 2953
155 Ga0496123_0072797 3300048926 Bacteria 2136
156 Ga0496126_0000048 3300048929 Bacteria 317977
157 Ga0501033_0045344 3300049570 Bacteria 3272
158 Ga0501034_0061911 3300049571 Bacteria 3757
159 Ga0501036_0006154 3300049572 Bacteria 9735
160 Ga0501037_0012863 3300049573 Bacteria 6167
161 Ga0501037_0123713 3300049573 Bacteria 1858
162 Ga0501038_0037371 3300049574 Bacteria 4257
163 Ga0501038_0129644 3300049574 Bacteria 2072
164 Ga0501038_0132745 3300049574 Bacteria 2042
165 Ga0501038_0503757 3300049574 Bacteria 925
166 Ga0501039_0001879 3300049575 Bacteria 15525
167 Ga0501039_0045292 3300049575 Bacteria 3399
168 Ga0501039_0212441 3300049575 Bacteria 1521
169 Ga0501040_0000364 3300049576 Bacteria 26778
170 Ga0501040_0016452 3300049576 Bacteria 4896
171 Ga0501041_0001704 3300049577 Bacteria 12316
172 Ga0501042_0001225 3300049578 Bacteria 14917
173 Ga0501042_0040862 3300049578 Bacteria 3296
174 Ga0501043_0001906 3300049579 Bacteria 17879
175 Ga0501046_0001967 3300049580 Bacteria 19534
176 Ga0501046_0052268 3300049580 Bacteria 3220
177 Ga0501047_0004030 3300049581 Bacteria 13813
178 Ga0501047_0012435 3300049581 Bacteria 8058
179 Ga0501048_0008403 3300049582 Bacteria 7806
180 Ga0501048_0008684 3300049582 Bacteria 7659
181 Ga0501048_0014418 3300049582 Bacteria 5850
182 Ga0501069_0001822 3300049585 Bacteria 10626
183 Ga0501070_0005556 3300049586 Bacteria 10752
184 Ga0501070_0051857 3300049586 Bacteria 3404
185 Ga0501070_0096470 3300049586 Bacteria 2446
186 Ga0501071_0006855 3300049587 Bacteria 7422
187 Ga0501071_0030247 3300049587 Bacteria 3829
188 Ga0501072_0000418 3300049588 Bacteria 30385
189 Ga0501072_0028485 3300049588 Bacteria 4361
190 Ga0501073_0018489 3300049589 Bacteria 5039
191 Ga0501074_0000975 3300049590 Bacteria 18524
192 Ga0501074_0015742 3300049590 Bacteria 5498
193 Ga0501074_0072825 3300049590 Bacteria 2468
194 Ga0501075_0001146 3300049591 Bacteria 17104
195 Ga0501076_0000720 3300049592 Bacteria 21369
196 Ga0501076_0079654 3300049592 Bacteria 2628
197 Ga0501077_0001006 3300049593 Bacteria 17008
198 Ga0501077_0126723 3300049593 Bacteria 1618
199 Ga0501079_0075111 3300049741 Bacteria 2613
200 Ga0501079_0110019 3300049741 Bacteria 2140
201 Ga0501080_0020014 3300049742 Bacteria 6194
202 Ga0501080_0077160 3300049742 Bacteria 3098
203 Ga0501081_0015677 3300049743 Bacteria 5002
204 Ga0501081_0037572 3300049743 Bacteria 3304
205 Ga0501083_0279894 3300049744 Bacteria 1085
206 Ga0501035_0018684 3300049822 Bacteria 6385
207 Ga0501035_0136827 3300049822 Bacteria 2132
208 Ga0501044_0074497 3300049823 Bacteria 3448
209 Ga0501045_0015902 3300049824 Bacteria 5337
210 Ga0501045_0026203 3300049824 Bacteria 4192
211 nmdc:mga00v17_291399_c1 3300050491 Bacteria 1060
212 nmdc:mga00v17_3346_c1 3300050491 Bacteria 8274
213 nmdc:mga00v17_48273_c1 3300050491 Bacteria 2580
214 nmdc:mga0yw44_135284_c1 3300050492 Bacteria 1599
215 nmdc:mga0yw44_155189_c1 3300050492 Bacteria 1496
216 nmdc:mga0yw44_19907_c1 3300050492 Bacteria 3712
217 nmdc:mga0yw44_280812_c1 3300050492 Bacteria 1113
218 nmdc:mga06z11_152483_c1 3300050494 Bacteria 1315
219 nmdc:mga07m45_75517_c1 3300050496 Bacteria 1920
220 nmdc:mga05p37_843012_c1 3300050507 Bacteria 997
221 nmdc:mga08y16_632234_c1 3300050511 Bacteria 1076
222 nmdc:mga0n895_120728_c1 3300050512 Bacteria 2642
223 nmdc:mga0rr50_150457_c1 3300050513 Bacteria 1880
224 Ga0495619_0035634 3300053085 Bacteria 3237
225 Ga0500573_0188792 3300053140 Bacteria 1102
226 Ga0501084_0002240 3300054114 Bacteria 15528
227 Ga0501084_0287849 3300054114 Bacteria 1388
228 Ga0587077_034808 3300059493 Bacteria 980
229 Ga0587082_009049 3300059504 Bacteria 1403
230 Ga0587083_0033978 3300059505 Bacteria 1032
231 Ga0587088_001886 3300059508 Bacteria 2275
232 Ga0587088_004496 3300059508 Bacteria 1770
233 Ga0587069_000932 3300059642 Bacteria 2487
234 Ga0587107_016011 3300059652 Bacteria 986
235 Ga0587071_021163 3300060344 Bacteria 1191
236 Ga0587071_033215 3300060344 Bacteria 1004
237 Ga0501082_0044848 3300060353 Bacteria 3814
238 Ga0466962_0046733 3300061719 Bacteria 2068
239 Ga0466962_0101023 3300061719 Bacteria 1385
240 Ga0530510_0000039 3300061734 Bacteria 60006
241 2559430121 2558860280 Bacteria 11429938
242 2644457323 2643221681 Bacteria 3707866
243 2644537726 2643221697 Bacteria 3575694
244 2645719426 2643221961 Bacteria 3919167
245 2645726337 2643221962 Bacteria 3874254
246 2974320027 2974315732 Bacteria 4602776
247 2984523894 2984523437 Bacteria 4508481
248 2984594661 2984592036 Bacteria 3670284
249 8053946849 8053945823 Bacteria 8962862
250 Ga0587106_000547
251 Ga0070658_10010312
252 Ga0070658_10138014
253 Ga0070709_10329817
254 Ga0070663_100585285
255 Ga0070662_100004595
256 Ga0070681_10164712
257 Ga0070679_100030119
258 Ga0070679_100211629
259 Ga0070684_100695246
260 Ga0068855_100119832
261 Ga0068852_100120097
262 Ga0068852_100488429
263 Ga0081455_10012457
264 Ga0081455_10053136
265 Ga0081538_10010497
266 Ga0081538_10101731
267 Ga0081540_1027875
268 Ga0081539_10003861
269 Ga0075365_10045000
270 Ga0075365_10318040
271 Ga0075368_10005569
272 Ga0075368_10120405
273 Ga0075363_100016371
274 Ga0075364_10004230
275 Ga0075364_10008529
276 Ga0075370_10077754
277 Ga0075370_10134527
278 Ga0111539_10420011
279 Ga0105245_10009527
280 Ga0114129_10445242
281 Ga0105241_10266654
282 Ga0105242_10076610
283 Ga0105238_10026007
284 Ga0157372_10000022
285 Ga0157375_10922221
286 Ga0206353_11665632
287 Ga0207688_10153646
288 Ga0207647_10046062
289 Ga0207705_10032367
290 Ga0207705_10239339
291 Ga0207654_10426744
292 Ga0207707_10124850
293 Ga0207671_10333437
294 Ga0207660_10050610
295 Ga0207660_10294726
296 Ga0207657_10098765
297 Ga0207652_10015367
298 Ga0207687_10007847
299 Ga0207664_10037412
300 Ga0207706_10044599
301 Ga0207686_10216757
302 Ga0207661_10677518
303 Ga0207667_10247123
304 Ga0207639_10034116
305 Ga0207675_100001894
306 Ga0207698_10477199
307 Ga0265334_10000455
308 Ga0307511_10000336
309 Ga0307408_100029179
310 Ga0307413_10080995
311 Ga0307410_10013404
312 Ga0307406_10010123
313 Ga0307407_10000418
314 Ga0307412_10134019
315 Ga0307409_100000662
316 Ga0307409_100024979
317 Ga0307409_100051864
318 Ga0307409_100166184
319 Ga0307416_100078621
320 Ga0307416_100125076
321 Ga0307414_10323109
322 Ga0307411_10016785
323 Ga0307415_100000879
324 Ga0307415_100013199
325 Ga0307415_100281121
326 Ga0307415_100348531
327 Ga0373933_0312539
328 Ga0373937_0010141
329 Ga0395900_0031589
330 Ga0439438_024582
331 Ga0451797_0006947
332 Ga0451807_0364074
333 Ga0451833_0928081
334 Ga0451837_1491930
335 Ga0451843_1497221
336 Ga0451853_1593044
337 Ga0439433_0005073
338 Ga0439448_0028213
339 Ga0439449_0009604
340 Ga0439450_009641
341 Ga0439451_011179
342 Ga0439455_0020623
343 Ga0439456_024176
344 Ga0439457_000441
345 Ga0439463_010222
346 Ga0450913_000375
347 Ga0450900_006062
348 Ga0439464_0000511
349 Ga0450916_013231
350 Ga0466961_0028346
351 Ga0466961_0134251
352 Ga0466961_0172492
353 Ga0466961_0308179
354 Ga0466963_0241971
355 Ga0466964_0031758
356 Ga0466970_0039599
357 Ga0466970_0050645
358 Ga0466970_0122689
359 Ga0466957_0079587
360 Ga0466957_0231908
361 Ga0466960_0012762
362 Ga0466959_0012850
363 Ga0466959_0081086
364 Ga0466958_0139014
365 Ga0466958_0258585
366 Ga0466958_0289724
367 Ga0466967_0001180
368 Ga0466967_0003514
369 Ga0466967_0006894
370 Ga0466967_0032966
371 Ga0466967_0061366
372 Ga0466967_0522491
373 Ga0466967_0597193
374 Ga0466967_0601914
375 Ga0495651_0024138
376 Ga0495607_0077025
377 Ga0495608_0006171
378 Ga0495618_0187688
379 Ga0495663_0030910
380 Ga0495652_0478075
381 Ga0495609_0161682
382 Ga0495657_0010435
383 Ga0495669_0082115
384 Ga0495680_0007370
385 Ga0495680_0257502
386 Ga0495683_0000720
387 Ga0495675_0047019
388 Ga0495677_0026550
389 Ga0496101_0245198
390 Ga0496102_0004469
391 Ga0496104_0008388
392 Ga0496107_0178449
393 Ga0496108_0004408
394 Ga0496109_0033029
395 Ga0496110_0004828
396 Ga0496110_0050907
397 Ga0496111_0001458
398 Ga0496112_0431585
399 Ga0496114_0252233
400 Ga0496114_0270226
401 Ga0496114_0368790
402 Ga0496115_0249922
403 Ga0496122_0055765
404 Ga0496123_0072797
405 Ga0496126_0000048
406 Ga0501033_0045344
407 Ga0501034_0061911
408 Ga0501036_0006154
409 Ga0501037_0012863
410 Ga0501037_0123713
411 Ga0501038_0037371
412 Ga0501038_0129644
413 Ga0501038_0132745
414 Ga0501038_0503757
415 Ga0501039_0001879
416 Ga0501039_0045292
417 Ga0501039_0212441
418 Ga0501040_0000364
419 Ga0501040_0016452
420 Ga0501041_0001704
421 Ga0501042_0001225
422 Ga0501042_0040862
423 Ga0501043_0001906
424 Ga0501046_0001967
425 Ga0501046_0052268
426 Ga0501047_0004030
427 Ga0501047_0012435
428 Ga0501048_0008403
429 Ga0501048_0008684
430 Ga0501048_0014418
431 Ga0501069_0001822
432 Ga0501070_0005556
433 Ga0501070_0051857
434 Ga0501070_0096470
435 Ga0501071_0006855
436 Ga0501071_0030247
437 Ga0501072_0000418
438 Ga0501072_0028485
439 Ga0501073_0018489
440 Ga0501074_0000975
441 Ga0501074_0015742
442 Ga0501074_0072825
443 Ga0501075_0001146
444 Ga0501076_0000720
445 Ga0501076_0079654
446 Ga0501077_0001006
447 Ga0501077_0126723
448 Ga0501079_0075111
449 Ga0501079_0110019
450 Ga0501080_0020014
451 Ga0501080_0077160
452 Ga0501081_0015677
453 Ga0501081_0037572
454 Ga0501083_0279894
455 Ga0501035_0018684
456 Ga0501035_0136827
457 Ga0501044_0074497
458 Ga0501045_0015902
459 Ga0501045_0026203
460 nmdc:mga00v17_291399_c1
461 nmdc:mga00v17_3346_c1
462 nmdc:mga00v17_48273_c1
463 nmdc:mga0yw44_135284_c1
464 nmdc:mga0yw44_155189_c1
465 nmdc:mga0yw44_19907_c1
466 nmdc:mga0yw44_280812_c1
467 nmdc:mga06z11_152483_c1
468 nmdc:mga07m45_75517_c1
469 nmdc:mga05p37_843012_c1
470 nmdc:mga08y16_632234_c1
471 nmdc:mga0n895_120728_c1
472 nmdc:mga0rr50_150457_c1
473 Ga0495619_0035634
474 Ga0500573_0188792
475 Ga0501084_0002240
476 Ga0501084_0287849
477 Ga0587077_034808
478 Ga0587082_009049
479 Ga0587083_0033978
480 Ga0587088_001886
481 Ga0587088_004496
482 Ga0587069_000932
483 Ga0587107_016011
484 Ga0587071_021163
485 Ga0587071_033215
486 Ga0501082_0044848
487 Ga0466962_0046733
488 Ga0466962_0101023
489 Ga0530510_0000039
490 2559430121
491 2644457323
492 2644537726
493 2645719426
494 2645726337
495 2974320027
496 2984523894
497 2984594661
498 8053946849

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

21

173

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xu1-assembly1.cif.gz_A structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.8879 3 224
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.8827 3 227
5xu1-assembly1.cif.gz_B structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.8802 3 224
7e7i-assembly1.cif.gz_A cryo-em structure of human abca4 in the apo state 0.8794 4 226
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.8792 6 229
ID Description Score Start End Superfamily
af_Q6BEX0_1_254_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9724 3 240 3.40.50.300
af_P37388_2_240_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9543 3 240 3.40.50.300
af_P77509_7_245_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9523 4 238 3.40.50.300
af_P37388_2_240_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9465 3 240 3.40.50.300
af_P77257_8_237_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9456 4 240 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A6J6IZJ1-F1-model_v4 Unannotated protein 0.9867 1 246 GO:0005524
GO:0016887
AF-A4AIX1-F1-model_v4 ABC sugar transporter, ATPase subunit 0.9835 3 240 GO:0005524
GO:0016887
AF-A0A2U2S9Q4-F1-model_v4 ABC transporter ATP-binding protein 0.9808 3 239 GO:0005524
GO:0016887
AF-A0A154IK00-F1-model_v4 ABC transporter ATP-binding protein 0.9793 1 239 GO:0005524
GO:0016887
AF-A0A2T0UCU5-F1-model_v4 Monosaccharide ABC transporter ATP-binding protein (CUT2 family) 0.9785 6 240 GO:0005524
GO:0016887

Map