F360805

General Info

Members Datasets Scaffolds Average Seq Length
249 153 498 296

Family's Representative Sequence

Representative Sequence 3300025939|Ga0207665_10082698|Ga0207665_100826982
Length 335
Sequence MARVYPSRPVDSGNVSASFRPSGVIVPLVTPFAADGSVDLGSLRSLAERAIAAGATGIVALATTGEPTSLDDAERAAVVATCADVCAQQAAALVVGAGTNDTRTTIARHEALADVPGVTASLAVVPYYVRPSEAAIVRHFQVVAERSPVPLIAYNIPYRTGRGLGAAALLELAATENVAGVKQAVGAVDADTLLVLAGARERFALLGGDDAFLFPLVLMGAAGAIAASANVCTGSFCEMIARGVRGDVEGGRPLAEALLPLVQALFAEPSPAVIKAVLHALGRIPTPDVRMPLAPASERRPRPRCGGSRSTPAGSSGRRARRSTGTPGRRGGWPP

Samples

Sample ID Description Type Environment
1 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
68 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
69 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
70 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
71 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
72 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
73 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
74 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
75 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
76 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
82 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
83 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
86 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
87 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
88 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
89 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
90 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
91 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
92 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
93 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
94 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
95 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
98 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
99 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
100 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
103 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
104 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
105 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
106 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
110 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
111 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
114 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
122 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
123 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
127 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
128 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
129 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
132 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
143 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
144 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
145 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
146 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
149 2558860280 Kutzneria sp. 744 Isolate Unclassified
150 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
151 2643221692 Nocardia sp. Root136 Isolate Unclassified
152 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
153 2922554459 Rhodococcus sp. 66b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.59
Metatranscriptomes 0.4
Isolates 2.01

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.81
Nodule 0
Rhizoplane 17.27
Rhizosphere 76.71
Stem 0
Stem Tuber 0
Unclassified 4.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207665_10082698 3300025939 Bacteria 2213
2 rootH1_10143341 3300003323 Bacteria 2230
3 Ga0070683_100017418 3300005329 Bacteria 6351
4 Ga0070683_100070366 3300005329 Bacteria 3263
5 Ga0070682_100101817 3300005337 Unclassified 1897
6 Ga0068868_100015728 3300005338 Bacteria 5604
7 Ga0070661_100126088 3300005344 Bacteria 1921
8 Ga0070713_100261385 3300005436 Bacteria 1582
9 Ga0070710_10115993 3300005437 Bacteria 1615
10 Ga0070694_100463073 3300005444 Bacteria 1003
11 Ga0070708_100279994 3300005445 Unclassified 1570
12 Ga0070681_10005117 3300005458 Bacteria 12655
13 Ga0070681_10090016 3300005458 Bacteria 3019
14 Ga0070706_100005386 3300005467 Bacteria 12192
15 Ga0070706_100019263 3300005467 Bacteria 6295
16 Ga0070706_100178824 3300005467 Bacteria 1980
17 Ga0070706_100294059 3300005467 Bacteria 1516
18 Ga0070707_100455731 3300005468 Bacteria 1239
19 Ga0070698_100024380 3300005471 Bacteria 6314
20 Ga0070699_100425267 3300005518 Unclassified 1202
21 Ga0070679_100220569 3300005530 Bacteria 1857
22 Ga0070684_100025312 3300005535 Bacteria 4987
23 Ga0070684_100171504 3300005535 Bacteria 1970
24 Ga0070697_100043986 3300005536 Bacteria 3617
25 Ga0068853_100003903 3300005539 Bacteria 11431
26 Ga0070695_100010882 3300005545 Bacteria 5435
27 Ga0070696_100072268 3300005546 Bacteria 2429
28 Ga0068856_100037133 3300005614 Bacteria 4779
29 Ga0068856_100049329 3300005614 Bacteria 4149
30 Ga0068852_100079249 3300005616 Bacteria 2909
31 Ga0068866_10163226 3300005718 Bacteria 1301
32 Ga0068860_100366198 3300005843 Bacteria 1421
33 Ga0081455_10160189 3300005937 Bacteria 1726
34 Ga0081455_10164323 3300005937 Bacteria 1698
35 Ga0070717_10438394 3300006028 Bacteria 1176
36 Ga0070712_100049812 3300006175 Bacteria 2910
37 Ga0070712_100057799 3300006175 Bacteria 2726
38 Ga0075362_10070919 3300006177 Bacteria 1591
39 Ga0075430_100143459 3300006846 Bacteria 1989
40 Ga0075431_100060366 3300006847 Bacteria 3912
41 Ga0075431_100290048 3300006847 Bacteria 1655
42 Ga0075431_100487215 3300006847 Bacteria 1225
43 Ga0075433_10030611 3300006852 Bacteria 4593
44 Ga0075434_100003620 3300006871 Bacteria 13792
45 Ga0075434_100006922 3300006871 Bacteria 10449
46 Ga0075434_100030137 3300006871 Bacteria 5342
47 Ga0075434_100203361 3300006871 Bacteria 2001
48 Ga0075429_100004560 3300006880 Bacteria 11908
49 Ga0075436_100007369 3300006914 Bacteria 7520
50 Ga0075435_100000426 3300007076 Bacteria 25947
51 Ga0075435_100005214 3300007076 Bacteria 9040
52 Ga0075435_100028167 3300007076 Bacteria 4404
53 Ga0105240_10178044 3300009093 Bacteria 2512
54 Ga0105245_10149160 3300009098 Bacteria 2209
55 Ga0105245_10151720 3300009098 Bacteria 2192
56 Ga0105245_10159683 3300009098 Bacteria 2138
57 Ga0114129_10227655 3300009147 Bacteria 2512
58 Ga0105242_10175223 3300009176 Bacteria 1888
59 Ga0105237_10251892 3300009545 Bacteria 1768
60 Ga0105238_10385718 3300009551 Bacteria 1393
61 Ga0105249_10343443 3300009553 Bacteria 1510
62 Ga0105239_10066679 3300010375 Bacteria 3954
63 Ga0105239_10252353 3300010375 Bacteria 1981
64 Ga0157369_10046841 3300013105 Bacteria 4698
65 Ga0157372_10057983 3300013307 Bacteria 4328
66 Ga0157372_10065504 3300013307 Bacteria 4080
67 Ga0157372_10147752 3300013307 Bacteria 2711
68 Ga0157375_10320881 3300013308 Bacteria 1714
69 Ga0206353_11363075 3300020082 Bacteria 3345
70 Ga0207699_10195650 3300025906 Bacteria 1367
71 Ga0207684_10251544 3300025910 Bacteria 1525
72 Ga0207707_10045803 3300025912 Bacteria 3811
73 Ga0207671_10171101 3300025914 Bacteria 1687
74 Ga0207693_10055896 3300025915 Bacteria 3095
75 Ga0207693_10093583 3300025915 Bacteria 2356
76 Ga0207693_10109269 3300025915 Bacteria 2169
77 Ga0207652_10048518 3300025921 Bacteria 3630
78 Ga0207687_10111971 3300025927 Bacteria 2027
79 Ga0207687_10138895 3300025927 Bacteria 1841
80 Ga0207700_10032280 3300025928 Bacteria 3733
81 Ga0207700_10056916 3300025928 Bacteria 2946
82 Ga0207700_10080992 3300025928 Bacteria 2534
83 Ga0207700_10324098 3300025928 Bacteria 1336
84 Ga0207664_10132184 3300025929 Bacteria 2102
85 Ga0207686_10249717 3300025934 Bacteria 1295
86 Ga0207704_10457467 3300025938 Bacteria 1020
87 Ga0207661_10065741 3300025944 Bacteria 2944
88 Ga0207661_10137526 3300025944 Bacteria 2100
89 Ga0207661_10143383 3300025944 Bacteria 2058
90 Ga0207667_10054194 3300025949 Bacteria 4218
91 Ga0207658_10205334 3300025986 Bacteria 1648
92 Ga0207677_10016924 3300026023 Bacteria 4331
93 Ga0207639_10085177 3300026041 Bacteria 2513
94 Ga0207708_10121442 3300026075 Bacteria 2036
95 Ga0207702_10033189 3300026078 Bacteria 4310
96 Ga0207702_10066998 3300026078 Bacteria 3080
97 Ga0307511_10000212 3300030521 Bacteria 59189
98 Ga0265327_10005138 3300031251 Bacteria 11101
99 Ga0265327_10020983 3300031251 Bacteria 3959
100 Ga0307408_100159138 3300031548 Unclassified 1792
101 Ga0316578_10150739 3300031728 Unclassified 1401
102 Ga0307407_10152177 3300031903 Bacteria 1504
103 Ga0307409_100026431 3300031995 Bacteria 4093
104 Ga0307409_100184714 3300031995 Unclassified 1849
105 Ga0307416_100039743 3300032002 Bacteria 3646
106 Ga0307415_100272872 3300032126 Unclassified 1386
107 Ga0316574_0029095 3300035398 Bacteria 3336
108 Ga0373931_0138754 3300035691 Bacteria 1406
109 Ga0373937_0179826 3300036401 Bacteria 1986
110 Ga0373937_0310631 3300036401 Bacteria 1491
111 Ga0395905_0355174 3300037471 Bacteria 1358
112 Ga0395901_0209678 3300038443 Bacteria 2040
113 Ga0395901_0366332 3300038443 Bacteria 1485
114 Ga0436365_0903990 3300039437 Bacteria 6393
115 Ga0439439_0022110 3300041406 Unclassified 1587
116 Ga0466963_0000088 3300044694 Bacteria 31924
117 Ga0466963_0007061 3300044694 Bacteria 6686
118 Ga0466964_0016718 3300044706 Bacteria 2803
119 Ga0466957_0007004 3300044842 Bacteria 6373
120 Ga0466957_0015599 3300044842 Bacteria 4438
121 Ga0466958_0008438 3300045836 Bacteria 5715
122 Ga0466967_0011154 3300045976 Bacteria 6789
123 Ga0466967_0024685 3300045976 Bacteria 4946
124 Ga0466967_0044308 3300045976 Bacteria 3858
125 Ga0466967_0084964 3300045976 Bacteria 2864
126 Ga0466967_0120210 3300045976 Bacteria 2426
127 Ga0466967_0475613 3300045976 Bacteria 1223
128 Ga0495592_0009005 3300046454 Bacteria 7499
129 Ga0495651_0185160 3300046462 Bacteria 1470
130 Ga0495653_0148828 3300046463 Bacteria 1638
131 Ga0495582_0057045 3300046473 Bacteria 2153
132 Ga0495628_0003946 3300046516 Bacteria 13209
133 Ga0495628_0030801 3300046516 Bacteria 4342
134 Ga0495628_0134956 3300046516 Bacteria 1887
135 Ga0495630_0011310 3300046517 Bacteria 6455
136 Ga0495630_0047610 3300046517 Bacteria 3208
137 Ga0495630_0058879 3300046517 Bacteria 2881
138 Ga0495630_0097683 3300046517 Bacteria 2221
139 Ga0495630_0296446 3300046517 Bacteria 1235
140 Ga0495640_0006570 3300046533 Bacteria 9187
141 Ga0495668_0000248 3300046616 Bacteria 76465
142 Ga0495613_0265046 3300046689 Bacteria 1196
143 Ga0495613_0335713 3300046689 Bacteria 1041
144 Ga0495674_0222640 3300047319 Bacteria 1559
145 Ga0495674_0304873 3300047319 Bacteria 1300
146 Ga0495672_0035108 3300047320 Bacteria 3090
147 Ga0495675_0022056 3300047444 Bacteria 4059
148 Ga0496100_0049788 3300048903 Bacteria 2711
149 Ga0496100_0243233 3300048903 Bacteria 1328
150 Ga0496101_0129753 3300048904 Bacteria 1913
151 Ga0496101_0322842 3300048904 Bacteria 1211
152 Ga0496102_0032828 3300048905 Bacteria 4665
153 Ga0496102_0055307 3300048905 Bacteria 3619
154 Ga0496102_0124420 3300048905 Bacteria 2410
155 Ga0496102_0153460 3300048905 Bacteria 2165
156 Ga0496102_0245571 3300048905 Bacteria 1688
157 Ga0496102_0289220 3300048905 Bacteria 1545
158 Ga0496104_0011705 3300048907 Bacteria 7867
159 Ga0496104_0038625 3300048907 Bacteria 4468
160 Ga0496104_0293920 3300048907 Bacteria 1537
161 Ga0496105_0007194 3300048908 Bacteria 8590
162 Ga0496105_0108055 3300048908 Bacteria 2297
163 Ga0496105_0126672 3300048908 Bacteria 2105
164 Ga0496105_0342958 3300048908 Bacteria 1194
165 Ga0496106_0036647 3300048909 Bacteria 3668
166 Ga0496106_0126919 3300048909 Bacteria 1998
167 Ga0496107_0029795 3300048910 Bacteria 3887
168 Ga0496108_0004086 3300048911 Bacteria 11710
169 Ga0496108_0021512 3300048911 Bacteria 5301
170 Ga0496108_0244407 3300048911 Bacteria 1561
171 Ga0496109_0043344 3300048912 Bacteria 4078
172 Ga0496109_0142468 3300048912 Bacteria 2242
173 Ga0496109_0168035 3300048912 Bacteria 2057
174 Ga0496109_0225749 3300048912 Bacteria 1762
175 Ga0496109_0609230 3300048912 Unclassified 1028
176 Ga0496110_0011466 3300048913 Bacteria 7255
177 Ga0496110_0203702 3300048913 Bacteria 1798
178 Ga0496111_0079887 3300048914 Bacteria 2386
179 Ga0496112_0000995 3300048915 Bacteria 20743
180 Ga0496112_0003877 3300048915 Bacteria 12504
181 Ga0496112_0043348 3300048915 Bacteria 4405
182 Ga0496112_0197219 3300048915 Bacteria 1974
183 Ga0496113_0051214 3300048916 Bacteria 3081
184 Ga0496113_0161284 3300048916 Bacteria 1773
185 Ga0496113_0242282 3300048916 Bacteria 1439
186 Ga0496114_0041305 3300048917 Bacteria 3822
187 Ga0496114_0061763 3300048917 Bacteria 3135
188 Ga0496114_0227572 3300048917 Bacteria 1638
189 Ga0496115_0211300 3300048918 Bacteria 1602
190 Ga0496115_0212710 3300048918 Bacteria 1597
191 Ga0496125_0030263 3300048928 Bacteria 4846
192 Ga0501034_0002735 3300049571 Bacteria 20751
193 Ga0501037_0193066 3300049573 Bacteria 1441
194 Ga0501038_0024308 3300049574 Bacteria 5406
195 Ga0501043_0005745 3300049579 Bacteria 9994
196 Ga0501047_0006843 3300049581 Bacteria 10712
197 Ga0501047_0007776 3300049581 Bacteria 10094
198 Ga0501048_0018046 3300049582 Bacteria 5193
199 Ga0501048_0155914 3300049582 Bacteria 1615
200 Ga0501067_0000290 3300049583 Bacteria 27481
201 Ga0501067_0063334 3300049583 Bacteria 2047
202 Ga0501068_0000010 3300049584 Bacteria 66003
203 Ga0501068_0002053 3300049584 Bacteria 10738
204 Ga0501069_0000271 3300049585 Bacteria 23472
205 Ga0501070_0030859 3300049586 Bacteria 4489
206 Ga0501070_0041733 3300049586 Bacteria 3821
207 Ga0501071_0013167 3300049587 Bacteria 5631
208 Ga0501073_0103343 3300049589 Bacteria 1978
209 Ga0501074_0021485 3300049590 Bacteria 4685
210 Ga0501076_0161695 3300049592 Bacteria 1824
211 Ga0501080_0043482 3300049742 Bacteria 4183
212 Ga0501080_0537608 3300049742 Bacteria 1042
213 Ga0501044_0041929 3300049823 Bacteria 4764
214 nmdc:mga0yw44_339390_c1 3300050492 Bacteria 1010
215 nmdc:mga07m45_35066_c1 3300050496 Bacteria 2790
216 nmdc:mga05p37_201195_c1 3300050507 Bacteria 2412
217 nmdc:mga09592_25118_c1 3300050508 Bacteria 4929
218 nmdc:mga0qj67_28863_c1 3300050509 Bacteria 4306
219 nmdc:mga0qj67_295189_c1 3300050509 Unclassified 1313
220 nmdc:mga0qj67_41241_c1 3300050509 Bacteria 3630
221 nmdc:mga06r32_35226_c1 3300050510 Bacteria 4723
222 nmdc:mga06r32_46437_c1 3300050510 Bacteria 4144
223 nmdc:mga06r32_488141_c1 3300050510 Bacteria 1209
224 nmdc:mga08y16_69993_c1 3300050511 Bacteria 3657
225 nmdc:mga0n895_163817_c1 3300050512 Bacteria 2255
226 nmdc:mga0n895_27378_c1 3300050512 Bacteria 5416
227 nmdc:mga0n895_294133_c1 3300050512 Bacteria 1646
228 nmdc:mga0n895_66491_c1 3300050512 Bacteria 3570
229 nmdc:mga0n895_99885_c1 3300050512 Bacteria 2910
230 nmdc:mga0rr50_21426_c1 3300050513 Bacteria 4412
231 nmdc:mga08x19_16461_c1 3300050514 Bacteria 4511
232 nmdc:mga08x19_38104_c1 3300050514 Bacteria 3053
233 nmdc:mga0a205_33323_c1 3300050515 Bacteria 4940
234 nmdc:mga0a205_9668_c1 3300050515 Bacteria 8830
235 Ga0495601_0202230 3300053077 Bacteria 1298
236 Ga0495595_0125898 3300053084 Bacteria 1250
237 Ga0495619_0158703 3300053085 Bacteria 1561
238 Ga0495619_0341938 3300053085 Bacteria 1035
239 Ga0500556_0000934 3300053104 Bacteria 15796
240 Ga0500616_0001727 3300053153 Bacteria 20041
241 Ga0500616_0053806 3300053153 Bacteria 2110
242 Ga0500616_0151905 3300053153 Unclassified 1071
243 Ga0501084_0000333 3300054114 Bacteria 36146
244 Ga0530510_0032565 3300061734 Bacteria 3751
245 2559422497 2558860280 Bacteria 11429938
246 2566995303 2565956761 Bacteria 6601618
247 2644514669 2643221692 Bacteria 7282860
248 2904540192 2904535858 Bacteria 6308016
249 2922556597 2922554459 Bacteria 6683962
250 Ga0207665_10082698
251 rootH1_10143341
252 Ga0070683_100017418
253 Ga0070683_100070366
254 Ga0070682_100101817
255 Ga0068868_100015728
256 Ga0070661_100126088
257 Ga0070713_100261385
258 Ga0070710_10115993
259 Ga0070694_100463073
260 Ga0070708_100279994
261 Ga0070681_10005117
262 Ga0070681_10090016
263 Ga0070706_100005386
264 Ga0070706_100019263
265 Ga0070706_100178824
266 Ga0070706_100294059
267 Ga0070707_100455731
268 Ga0070698_100024380
269 Ga0070699_100425267
270 Ga0070679_100220569
271 Ga0070684_100025312
272 Ga0070684_100171504
273 Ga0070697_100043986
274 Ga0068853_100003903
275 Ga0070695_100010882
276 Ga0070696_100072268
277 Ga0068856_100037133
278 Ga0068856_100049329
279 Ga0068852_100079249
280 Ga0068866_10163226
281 Ga0068860_100366198
282 Ga0081455_10160189
283 Ga0081455_10164323
284 Ga0070717_10438394
285 Ga0070712_100049812
286 Ga0070712_100057799
287 Ga0075362_10070919
288 Ga0075430_100143459
289 Ga0075431_100060366
290 Ga0075431_100290048
291 Ga0075431_100487215
292 Ga0075433_10030611
293 Ga0075434_100003620
294 Ga0075434_100006922
295 Ga0075434_100030137
296 Ga0075434_100203361
297 Ga0075429_100004560
298 Ga0075436_100007369
299 Ga0075435_100000426
300 Ga0075435_100005214
301 Ga0075435_100028167
302 Ga0105240_10178044
303 Ga0105245_10149160
304 Ga0105245_10151720
305 Ga0105245_10159683
306 Ga0114129_10227655
307 Ga0105242_10175223
308 Ga0105237_10251892
309 Ga0105238_10385718
310 Ga0105249_10343443
311 Ga0105239_10066679
312 Ga0105239_10252353
313 Ga0157369_10046841
314 Ga0157372_10057983
315 Ga0157372_10065504
316 Ga0157372_10147752
317 Ga0157375_10320881
318 Ga0206353_11363075
319 Ga0207699_10195650
320 Ga0207684_10251544
321 Ga0207707_10045803
322 Ga0207671_10171101
323 Ga0207693_10055896
324 Ga0207693_10093583
325 Ga0207693_10109269
326 Ga0207652_10048518
327 Ga0207687_10111971
328 Ga0207687_10138895
329 Ga0207700_10032280
330 Ga0207700_10056916
331 Ga0207700_10080992
332 Ga0207700_10324098
333 Ga0207664_10132184
334 Ga0207686_10249717
335 Ga0207704_10457467
336 Ga0207661_10065741
337 Ga0207661_10137526
338 Ga0207661_10143383
339 Ga0207667_10054194
340 Ga0207658_10205334
341 Ga0207677_10016924
342 Ga0207639_10085177
343 Ga0207708_10121442
344 Ga0207702_10033189
345 Ga0207702_10066998
346 Ga0307511_10000212
347 Ga0265327_10005138
348 Ga0265327_10020983
349 Ga0307408_100159138
350 Ga0316578_10150739
351 Ga0307407_10152177
352 Ga0307409_100026431
353 Ga0307409_100184714
354 Ga0307416_100039743
355 Ga0307415_100272872
356 Ga0316574_0029095
357 Ga0373931_0138754
358 Ga0373937_0179826
359 Ga0373937_0310631
360 Ga0395905_0355174
361 Ga0395901_0209678
362 Ga0395901_0366332
363 Ga0436365_0903990
364 Ga0439439_0022110
365 Ga0466963_0000088
366 Ga0466963_0007061
367 Ga0466964_0016718
368 Ga0466957_0007004
369 Ga0466957_0015599
370 Ga0466958_0008438
371 Ga0466967_0011154
372 Ga0466967_0024685
373 Ga0466967_0044308
374 Ga0466967_0084964
375 Ga0466967_0120210
376 Ga0466967_0475613
377 Ga0495592_0009005
378 Ga0495651_0185160
379 Ga0495653_0148828
380 Ga0495582_0057045
381 Ga0495628_0003946
382 Ga0495628_0030801
383 Ga0495628_0134956
384 Ga0495630_0011310
385 Ga0495630_0047610
386 Ga0495630_0058879
387 Ga0495630_0097683
388 Ga0495630_0296446
389 Ga0495640_0006570
390 Ga0495668_0000248
391 Ga0495613_0265046
392 Ga0495613_0335713
393 Ga0495674_0222640
394 Ga0495674_0304873
395 Ga0495672_0035108
396 Ga0495675_0022056
397 Ga0496100_0049788
398 Ga0496100_0243233
399 Ga0496101_0129753
400 Ga0496101_0322842
401 Ga0496102_0032828
402 Ga0496102_0055307
403 Ga0496102_0124420
404 Ga0496102_0153460
405 Ga0496102_0245571
406 Ga0496102_0289220
407 Ga0496104_0011705
408 Ga0496104_0038625
409 Ga0496104_0293920
410 Ga0496105_0007194
411 Ga0496105_0108055
412 Ga0496105_0126672
413 Ga0496105_0342958
414 Ga0496106_0036647
415 Ga0496106_0126919
416 Ga0496107_0029795
417 Ga0496108_0004086
418 Ga0496108_0021512
419 Ga0496108_0244407
420 Ga0496109_0043344
421 Ga0496109_0142468
422 Ga0496109_0168035
423 Ga0496109_0225749
424 Ga0496109_0609230
425 Ga0496110_0011466
426 Ga0496110_0203702
427 Ga0496111_0079887
428 Ga0496112_0000995
429 Ga0496112_0003877
430 Ga0496112_0043348
431 Ga0496112_0197219
432 Ga0496113_0051214
433 Ga0496113_0161284
434 Ga0496113_0242282
435 Ga0496114_0041305
436 Ga0496114_0061763
437 Ga0496114_0227572
438 Ga0496115_0211300
439 Ga0496115_0212710
440 Ga0496125_0030263
441 Ga0501034_0002735
442 Ga0501037_0193066
443 Ga0501038_0024308
444 Ga0501043_0005745
445 Ga0501047_0006843
446 Ga0501047_0007776
447 Ga0501048_0018046
448 Ga0501048_0155914
449 Ga0501067_0000290
450 Ga0501067_0063334
451 Ga0501068_0000010
452 Ga0501068_0002053
453 Ga0501069_0000271
454 Ga0501070_0030859
455 Ga0501070_0041733
456 Ga0501071_0013167
457 Ga0501073_0103343
458 Ga0501074_0021485
459 Ga0501076_0161695
460 Ga0501080_0043482
461 Ga0501080_0537608
462 Ga0501044_0041929
463 nmdc:mga0yw44_339390_c1
464 nmdc:mga07m45_35066_c1
465 nmdc:mga05p37_201195_c1
466 nmdc:mga09592_25118_c1
467 nmdc:mga0qj67_28863_c1
468 nmdc:mga0qj67_295189_c1
469 nmdc:mga0qj67_41241_c1
470 nmdc:mga06r32_35226_c1
471 nmdc:mga06r32_46437_c1
472 nmdc:mga06r32_488141_c1
473 nmdc:mga08y16_69993_c1
474 nmdc:mga0n895_163817_c1
475 nmdc:mga0n895_27378_c1
476 nmdc:mga0n895_294133_c1
477 nmdc:mga0n895_66491_c1
478 nmdc:mga0n895_99885_c1
479 nmdc:mga0rr50_21426_c1
480 nmdc:mga08x19_16461_c1
481 nmdc:mga08x19_38104_c1
482 nmdc:mga0a205_33323_c1
483 nmdc:mga0a205_9668_c1
484 Ga0495601_0202230
485 Ga0495595_0125898
486 Ga0495619_0158703
487 Ga0495619_0341938
488 Ga0500556_0000934
489 Ga0500616_0001727
490 Ga0500616_0053806
491 Ga0500616_0151905
492 Ga0501084_0000333
493 Ga0530510_0032565
494 2559422497
495 2566995303
496 2644514669
497 2904540192
498 2922556597

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00701

DHDPS

Dihydrodipicolinate synthetase family

20

303

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1s5w-assembly1.cif.gz_A crystal structure analysis of a mutant of dihydrodipicolinate synthase--residue tyr133 to phe133 0.9265 2 280
2a6n-assembly1.cif.gz_A dihydrodipicolinate synthase (e. coli)- mutant r138a 0.9264 2 280
3qze-assembly2.cif.gz_D crystal structure of dapa (pa1010) at 1.6 a resolution 0.9263 3 280
1s5v-assembly1.cif.gz_A crystal structure analysis of a mutant of dihydrodipicolinate synthase--residue tyr107 to phe107 0.9253 2 280
1s5t-assembly1.cif.gz_A crystal structure analysis of a mutant of dihydrodipicolinate synthase--residue thr44 to val44 0.9232 2 280
ID Description Score Start End Superfamily
3pb2D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9161 4 280 3.20.20.70
6nvaA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9046 3 280 3.20.20.70
3di0A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9024 4 280 3.20.20.70
5f1uA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8978 1 280 3.20.20.70
3a5fA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8952 4 280 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A1C4YNG2-F1-model_v4 4-hydroxy-tetrahydrodipicolinate synthase 0.9672 1 280 GO:0008840
GO:0044281
AF-A0A4R6K8R7-F1-model_v4 4-hydroxy-tetrahydrodipicolinate synthase 0.9633 1 280 GO:0008840
GO:0044281
AF-A0A7K0LHH3-F1-model_v4 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7) 0.9578 3 280 GO:0005829
GO:0008840
GO:0009089
GO:0019877
AF-A0A4R4Y183-F1-model_v4 4-hydroxy-tetrahydrodipicolinate synthase 0.957 1 280 GO:0008840
GO:0044281
AF-A0A323VBE0-F1-model_v4 4-hydroxy-tetrahydrodipicolinate synthase 0.9516 1 280 GO:0008840
GO:0044281

Map