F360724

General Info

Members Datasets Scaffolds Average Seq Length
249 183 498 160

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10145096|Ga0105248_101450961
Length 174
Sequence VKPADAPVTPGVRALRAAGAQFTPHLYAFVERGGTRHSAEALGVPEHSVVKTLVMEAKGREGPAAPLVVLMHGDREVSTRELARQIGAREVAPASAVKVEAHTGYVPGGVSPFGTRKTLPVYVEETVLDLDAIYINGGKRGFLVRISPADLRRVLAPVAVRVAIPPREKGTAAP

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
44 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
101 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
104 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
105 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
106 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
107 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
108 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
109 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
110 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
111 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
112 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
113 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
114 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
115 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
116 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
117 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
120 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
121 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
122 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
123 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
124 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
125 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
126 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
127 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
130 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
131 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
132 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
133 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
134 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
135 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
136 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
139 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
140 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
141 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
152 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
153 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
154 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
155 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
156 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
157 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
158 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
159 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
160 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
161 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
162 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
165 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
166 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
167 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
168 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
169 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
170 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
177 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
178 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
179 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
182 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
183 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.6
Metatranscriptomes 0
Isolates 0.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.84
Nodule 0
Rhizoplane 2.41
Rhizosphere 84.34
Stem 0
Stem Tuber 0
Unclassified 2.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10145096 3300009177 Bacteria 2678
2 rootH1_10095978 3300003323 Bacteria 5905
3 Ga0070676_10680203 3300005328 Bacteria 750
4 Ga0070683_100028749 3300005329 Bacteria 5027
5 Ga0070690_100012253 3300005330 Bacteria 5044
6 Ga0070690_100083799 3300005330 Bacteria 2089
7 Ga0070690_100297286 3300005330 Bacteria 1157
8 Ga0070670_100015692 3300005331 Bacteria 6502
9 Ga0070670_100055801 3300005331 Bacteria 3390
10 Ga0070670_100298940 3300005331 Bacteria 1408
11 Ga0070677_10005891 3300005333 Bacteria 4060
12 Ga0068869_100070535 3300005334 Bacteria 2585
13 Ga0068869_100074417 3300005334 Unclassified 2521
14 Ga0070666_10060440 3300005335 Bacteria 2564
15 Ga0068868_100620684 3300005338 Bacteria 960
16 Ga0070660_100276689 3300005339 Bacteria 1373
17 Ga0070689_100709023 3300005340 Bacteria 879
18 Ga0070691_10070481 3300005341 Bacteria 1696
19 Ga0070661_100066940 3300005344 Bacteria 2639
20 Ga0070669_100016706 3300005353 Bacteria 5238
21 Ga0070675_100015727 3300005354 Bacteria 5988
22 Ga0070675_100021020 3300005354 Bacteria 5211
23 Ga0070671_100144813 3300005355 Bacteria 2005
24 Ga0070674_100013857 3300005356 Bacteria 4996
25 Ga0070673_100133756 3300005364 Bacteria 2084
26 Ga0070713_101459062 3300005436 Bacteria 664
27 Ga0070710_10157361 3300005437 Bacteria 1406
28 Ga0070701_10070618 3300005438 Bacteria 1866
29 Ga0070694_100127213 3300005444 Bacteria 1836
30 Ga0070694_101256230 3300005444 Bacteria 622
31 Ga0070663_100098239 3300005455 Bacteria 2181
32 Ga0070663_100221055 3300005455 Bacteria 1487
33 Ga0070678_100005165 3300005456 Bacteria 7502
34 Ga0070678_100700441 3300005456 Bacteria 912
35 Ga0070662_100012306 3300005457 Bacteria 5670
36 Ga0068867_100027503 3300005459 Bacteria 4087
37 Ga0070707_100546203 3300005468 Bacteria 1121
38 Ga0070672_100002741 3300005543 Bacteria 11281
39 Ga0070686_100111996 3300005544 Bacteria 1861
40 Ga0070696_100146513 3300005546 Bacteria 1730
41 Ga0070665_100007858 3300005548 Bacteria 10818
42 Ga0070665_100014869 3300005548 Bacteria 7812
43 Ga0070665_100312106 3300005548 Bacteria 1576
44 Ga0070704_100215827 3300005549 Bacteria 1557
45 Ga0070664_100019448 3300005564 Bacteria 5587
46 Ga0070664_101034837 3300005564 Bacteria 772
47 Ga0068859_100046698 3300005617 Bacteria 4349
48 Ga0068864_100008102 3300005618 Bacteria 8663
49 Ga0068864_100210145 3300005618 Bacteria 1791
50 Ga0068864_100546415 3300005618 Bacteria 1119
51 Ga0068861_100250561 3300005719 Bacteria 1511
52 Ga0068861_100679604 3300005719 Bacteria 954
53 Ga0068870_10004884 3300005840 Bacteria 5800
54 Ga0068863_100357346 3300005841 Bacteria 1423
55 Ga0068858_100270814 3300005842 Bacteria 1616
56 Ga0068860_100060116 3300005843 Bacteria 3612
57 Ga0068860_100598560 3300005843 Bacteria 1108
58 Ga0068860_101424561 3300005843 Bacteria 714
59 Ga0070717_10082354 3300006028 Bacteria 2704
60 Ga0070717_11271671 3300006028 Bacteria 669
61 Ga0075368_10012381 3300006042 Bacteria 3117
62 Ga0075368_10093157 3300006042 Bacteria 1233
63 Ga0075363_100386527 3300006048 Bacteria 821
64 Ga0075363_100690458 3300006048 Bacteria 616
65 Ga0075364_10004070 3300006051 Bacteria 8390
66 Ga0075364_10424566 3300006051 Bacteria 908
67 Ga0075366_10014375 3300006195 Bacteria 4520
68 Ga0075366_10014501 3300006195 Bacteria 4501
69 Ga0075370_10023855 3300006353 Bacteria 3373
70 Ga0075370_10334060 3300006353 Bacteria 904
71 Ga0068871_100775417 3300006358 Bacteria 882
72 Ga0068871_101867034 3300006358 Bacteria 571
73 Ga0075430_100091886 3300006846 Bacteria 2538
74 Ga0075431_100270517 3300006847 Bacteria 1722
75 Ga0075429_100125559 3300006880 Bacteria 2244
76 Ga0068865_100088726 3300006881 Bacteria 2238
77 Ga0097620_100046699 3300006931 Bacteria 4349
78 Ga0111539_10033055 3300009094 Bacteria 6280
79 Ga0111539_10084705 3300009094 Bacteria 3726
80 Ga0111539_10170118 3300009094 Bacteria 2546
81 Ga0114129_10719421 3300009147 Bacteria 1281
82 Ga0105237_10171450 3300009545 Bacteria 2170
83 Ga0105238_10477633 3300009551 Bacteria 1245
84 Ga0105239_10010994 3300010375 Bacteria 10105
85 Ga0163162_11008869 3300013306 Bacteria 941
86 Ga0157375_10021199 3300013308 Bacteria 5953
87 Ga0163163_10015374 3300014325 Bacteria 7074
88 Ga0163163_10034921 3300014325 Bacteria 4874
89 Ga0157380_10016764 3300014326 Bacteria 5410
90 Ga0182008_10000831 3300014497 Bacteria 21530
91 Ga0157379_10282780 3300014968 Bacteria 1510
92 Ga0207682_10001139 3300025893 Bacteria 12314
93 Ga0207642_10133694 3300025899 Bacteria 1298
94 Ga0207645_10001979 3300025907 Bacteria 16458
95 Ga0207643_10002572 3300025908 Bacteria 9825
96 Ga0207649_10041372 3300025920 Bacteria 2805
97 Ga0207646_11186308 3300025922 Bacteria 670
98 Ga0207681_10161156 3300025923 Bacteria 1691
99 Ga0207650_10065445 3300025925 Bacteria 2724
100 Ga0207659_10007601 3300025926 Bacteria 6679
101 Ga0207700_10223002 3300025928 Bacteria 1599
102 Ga0207706_10047423 3300025933 Bacteria 3801
103 Ga0207706_10048686 3300025933 Bacteria 3748
104 Ga0207670_10086247 3300025936 Bacteria 2208
105 Ga0207669_10507829 3300025937 Bacteria 966
106 Ga0207704_10044485 3300025938 Bacteria 2631
107 Ga0207665_10294790 3300025939 Bacteria 1211
108 Ga0207691_10007472 3300025940 Bacteria 10521
109 Ga0207689_10098229 3300025942 Unclassified 2405
110 Ga0207689_10100013 3300025942 Bacteria 2383
111 Ga0207679_10971490 3300025945 Bacteria 778
112 Ga0207668_10054177 3300025972 Bacteria 2783
113 Ga0207658_10015257 3300025986 Bacteria 5271
114 Ga0207703_10355110 3300026035 Bacteria 1350
115 Ga0207703_10355924 3300026035 Bacteria 1349
116 Ga0207639_10626707 3300026041 Bacteria 993
117 Ga0207678_10067926 3300026067 Bacteria 3059
118 Ga0207678_10122530 3300026067 Bacteria 2218
119 Ga0207678_10589017 3300026067 Bacteria 974
120 Ga0207708_10040986 3300026075 Bacteria 3531
121 Ga0207708_10675128 3300026075 Bacteria 881
122 Ga0207641_10090808 3300026088 Bacteria 2672
123 Ga0207648_10044908 3300026089 Bacteria 3876
124 Ga0207676_10042457 3300026095 Bacteria 3498
125 Ga0207675_100062996 3300026118 Bacteria 3465
126 Ga0207675_100223024 3300026118 Bacteria 1816
127 Ga0207675_100304353 3300026118 Bacteria 1553
128 Ga0207683_10008671 3300026121 Bacteria 8693
129 Ga0207683_10009059 3300026121 Bacteria 8483
130 Ga0209967_1002770 3300027364 Bacteria 2282
131 Ga0209968_1003994 3300027526 Bacteria 2213
132 Ga0209813_10009655 3300027866 Bacteria 2476
133 Ga0209813_10199450 3300027866 Bacteria 740
134 Ga0209813_10325026 3300027866 Bacteria 603
135 Ga0207428_10171161 3300027907 Bacteria 1645
136 Ga0268266_10082530 3300028379 Bacteria 2804
137 Ga0268264_10514922 3300028381 Bacteria 1169
138 Ga0268264_10761296 3300028381 Bacteria 965
139 Ga0265327_10020540 3300031251 Bacteria 4019
140 Ga0307513_10063915 3300031456 Bacteria 3882
141 Ga0307513_10229691 3300031456 Bacteria 1669
142 Ga0307408_100716232 3300031548 Bacteria 901
143 Ga0307413_10641232 3300031824 Bacteria 875
144 Ga0307406_11065133 3300031901 Bacteria 697
145 Ga0307412_10099251 3300031911 Bacteria 2056
146 Ga0307415_100473261 3300032126 Unclassified 1089
147 Ga0373952_0050272 3300035092 Bacteria 992
148 Ga0373932_0064592 3300035112 Bacteria 1121
149 Ga0373954_0000055 3300035118 Bacteria 40229
150 Ga0373957_0195653 3300035120 Bacteria 841
151 Ga0373955_0197689 3300035172 Bacteria 1196
152 Ga0373942_0002470 3300035207 Bacteria 4483
153 Ga0373961_0115471 3300035241 Bacteria 884
154 Ga0316574_0290765 3300035398 Bacteria 1040
155 Ga0373924_0178067 3300035410 Bacteria 935
156 Ga0373931_0502425 3300035691 Bacteria 782
157 Ga0373933_0004744 3300035724 Bacteria 7433
158 Ga0373937_0000131 3300036401 Bacteria 72767
159 Ga0436363_0806093 3300039450 Unclassified 909
160 Ga0451793_1380023 3300041452 Bacteria 680
161 Ga0451797_0602689 3300041453 Bacteria 1559
162 Ga0451800_0794191 3300041459 Bacteria 569
163 Ga0451804_0203934 3300041463 Bacteria 962
164 Ga0451807_2054773 3300041486 Unclassified 1174
165 Ga0451853_0383426 3300041512 Bacteria 608
166 Ga0451853_1165008 3300041512 Bacteria 1221
167 Ga0439443_012959 3300042003 Bacteria 1240
168 Ga0439446_0089380 3300042156 Bacteria 963
169 Ga0451577_1017898 3300042876 Bacteria 743
170 Ga0453684_1350309 3300044712 Bacteria 741
171 Ga0453684_1859462 3300044712 Bacteria 610
172 Ga0495592_0592261 3300046454 Bacteria 677
173 Ga0495651_0563074 3300046462 Bacteria 723
174 Ga0495662_0415935 3300046476 Bacteria 660
175 Ga0495640_0019880 3300046533 Bacteria 4953
176 Ga0495640_0832720 3300046533 Bacteria 549
177 Ga0495586_0014573 3300046535 Bacteria 4177
178 Ga0495621_0142280 3300046539 Bacteria 939
179 Ga0495621_0552472 3300046539 Bacteria 500
180 Ga0495667_0248962 3300046559 Bacteria 1131
181 Ga0495635_0025308 3300046663 Bacteria 4134
182 Ga0495657_0059111 3300046675 Bacteria 2544
183 Ga0495669_0084926 3300046684 Bacteria 1456
184 Ga0495624_0047197 3300046690 Bacteria 2737
185 Ga0495602_0295384 3300048088 Bacteria 1188
186 Ga0496112_0273571 3300048915 Bacteria 1637
187 Ga0501036_0699446 3300049572 Bacteria 838
188 Ga0501038_0090845 3300049574 Bacteria 2559
189 Ga0501039_0210811 3300049575 Bacteria 1528
190 Ga0501039_0745176 3300049575 Bacteria 765
191 Ga0501039_1050400 3300049575 Bacteria 632
192 Ga0501040_0008686 3300049576 Bacteria 6598
193 Ga0501041_0004330 3300049577 Bacteria 8207
194 Ga0501041_0520956 3300049577 Bacteria 757
195 Ga0501042_0098215 3300049578 Bacteria 2106
196 Ga0501042_0929334 3300049578 Bacteria 634
197 Ga0501046_0054285 3300049580 Bacteria 3153
198 Ga0501048_0008923 3300049582 Bacteria 7549
199 Ga0501068_0035844 3300049584 Bacteria 2963
200 Ga0501071_0046193 3300049587 Bacteria 3128
201 Ga0501071_0349601 3300049587 Bacteria 1125
202 Ga0501071_1322441 3300049587 Bacteria 557
203 Ga0501072_0004342 3300049588 Bacteria 10759
204 Ga0501072_0081333 3300049588 Bacteria 2568
205 Ga0501073_0262131 3300049589 Bacteria 1193
206 Ga0501074_0682708 3300049590 Bacteria 725
207 Ga0501075_0002475 3300049591 Bacteria 12319
208 Ga0501075_0662331 3300049591 Unclassified 796
209 Ga0501076_0001408 3300049592 Bacteria 16105
210 Ga0501076_0205982 3300049592 Bacteria 1607
211 Ga0501076_0372783 3300049592 Bacteria 1173
212 Ga0501211_030790 3300049658 Unclassified 604
213 Ga0501079_0007587 3300049741 Bacteria 8218
214 Ga0501080_0232048 3300049742 Bacteria 1686
215 Ga0501080_0891517 3300049742 Bacteria 776
216 Ga0501081_0003604 3300049743 Bacteria 9904
217 Ga0501081_0842819 3300049743 Bacteria 690
218 Ga0501083_0063656 3300049744 Bacteria 2460
219 Ga0501035_0486922 3300049822 Bacteria 1017
220 Ga0501045_0015134 3300049824 Bacteria 5475
221 Ga0501045_0553933 3300049824 Bacteria 853
222 nmdc:mga03n38_413543_c1 3300050490 Bacteria 744
223 nmdc:mga00v17_227932_c1 3300050491 Bacteria 1207
224 nmdc:mga00v17_58590_c1 3300050491 Bacteria 2360
225 nmdc:mga0k408_17835_c1 3300050493 Bacteria 3957
226 nmdc:mga0k408_88375_c1 3300050493 Bacteria 1820
227 nmdc:mga06z11_117877_c1 3300050494 Bacteria 1478
228 nmdc:mga06z11_21894_c1 3300050494 Bacteria 2977
229 nmdc:mga04h51_261765_c1 3300050495 Bacteria 696
230 nmdc:mga04h51_359927_c1 3300050495 Bacteria 603
231 nmdc:mga04h51_5213_c1 3300050495 Bacteria 3299
232 nmdc:mga04h51_97618_c1 3300050495 Bacteria 1066
233 nmdc:mga07m45_85729_c1 3300050496 Bacteria 1801
234 nmdc:mga05p37_653397_c1 3300050507 Bacteria 1177
235 nmdc:mga09592_169255_c1 3300050508 Bacteria 1889
236 nmdc:mga09592_872752_c1 3300050508 Bacteria 758
237 nmdc:mga0qj67_541904_c1 3300050509 Bacteria 934
238 nmdc:mga0qj67_59903_c1 3300050509 Bacteria 3020
239 nmdc:mga06r32_354449_c1 3300050510 Bacteria 1452
240 nmdc:mga08y16_250597_c1 3300050511 Bacteria 1830
241 nmdc:mga0a205_465006_c1 3300050515 Bacteria 1124
242 Ga0495601_0104644 3300053077 Bacteria 1830
243 Ga0500577_0096245 3300053142 Bacteria 1204
244 Ga0500590_001540 3300053148 Bacteria 9564
245 Ga0501084_0032289 3300054114 Bacteria 4379
246 Ga0501084_0912289 3300054114 Bacteria 739
247 Ga0590071_049230 3300059421 Bacteria 1021
248 Ga0530510_0003476 3300061734 Bacteria 10827
249 2885083589 2885080285 Bacteria 6355622
250 Ga0105248_10145096
251 rootH1_10095978
252 Ga0070676_10680203
253 Ga0070683_100028749
254 Ga0070690_100012253
255 Ga0070690_100083799
256 Ga0070690_100297286
257 Ga0070670_100015692
258 Ga0070670_100055801
259 Ga0070670_100298940
260 Ga0070677_10005891
261 Ga0068869_100070535
262 Ga0068869_100074417
263 Ga0070666_10060440
264 Ga0068868_100620684
265 Ga0070660_100276689
266 Ga0070689_100709023
267 Ga0070691_10070481
268 Ga0070661_100066940
269 Ga0070669_100016706
270 Ga0070675_100015727
271 Ga0070675_100021020
272 Ga0070671_100144813
273 Ga0070674_100013857
274 Ga0070673_100133756
275 Ga0070713_101459062
276 Ga0070710_10157361
277 Ga0070701_10070618
278 Ga0070694_100127213
279 Ga0070694_101256230
280 Ga0070663_100098239
281 Ga0070663_100221055
282 Ga0070678_100005165
283 Ga0070678_100700441
284 Ga0070662_100012306
285 Ga0068867_100027503
286 Ga0070707_100546203
287 Ga0070672_100002741
288 Ga0070686_100111996
289 Ga0070696_100146513
290 Ga0070665_100007858
291 Ga0070665_100014869
292 Ga0070665_100312106
293 Ga0070704_100215827
294 Ga0070664_100019448
295 Ga0070664_101034837
296 Ga0068859_100046698
297 Ga0068864_100008102
298 Ga0068864_100210145
299 Ga0068864_100546415
300 Ga0068861_100250561
301 Ga0068861_100679604
302 Ga0068870_10004884
303 Ga0068863_100357346
304 Ga0068858_100270814
305 Ga0068860_100060116
306 Ga0068860_100598560
307 Ga0068860_101424561
308 Ga0070717_10082354
309 Ga0070717_11271671
310 Ga0075368_10012381
311 Ga0075368_10093157
312 Ga0075363_100386527
313 Ga0075363_100690458
314 Ga0075364_10004070
315 Ga0075364_10424566
316 Ga0075366_10014375
317 Ga0075366_10014501
318 Ga0075370_10023855
319 Ga0075370_10334060
320 Ga0068871_100775417
321 Ga0068871_101867034
322 Ga0075430_100091886
323 Ga0075431_100270517
324 Ga0075429_100125559
325 Ga0068865_100088726
326 Ga0097620_100046699
327 Ga0111539_10033055
328 Ga0111539_10084705
329 Ga0111539_10170118
330 Ga0114129_10719421
331 Ga0105237_10171450
332 Ga0105238_10477633
333 Ga0105239_10010994
334 Ga0163162_11008869
335 Ga0157375_10021199
336 Ga0163163_10015374
337 Ga0163163_10034921
338 Ga0157380_10016764
339 Ga0182008_10000831
340 Ga0157379_10282780
341 Ga0207682_10001139
342 Ga0207642_10133694
343 Ga0207645_10001979
344 Ga0207643_10002572
345 Ga0207649_10041372
346 Ga0207646_11186308
347 Ga0207681_10161156
348 Ga0207650_10065445
349 Ga0207659_10007601
350 Ga0207700_10223002
351 Ga0207706_10047423
352 Ga0207706_10048686
353 Ga0207670_10086247
354 Ga0207669_10507829
355 Ga0207704_10044485
356 Ga0207665_10294790
357 Ga0207691_10007472
358 Ga0207689_10098229
359 Ga0207689_10100013
360 Ga0207679_10971490
361 Ga0207668_10054177
362 Ga0207658_10015257
363 Ga0207703_10355110
364 Ga0207703_10355924
365 Ga0207639_10626707
366 Ga0207678_10067926
367 Ga0207678_10122530
368 Ga0207678_10589017
369 Ga0207708_10040986
370 Ga0207708_10675128
371 Ga0207641_10090808
372 Ga0207648_10044908
373 Ga0207676_10042457
374 Ga0207675_100062996
375 Ga0207675_100223024
376 Ga0207675_100304353
377 Ga0207683_10008671
378 Ga0207683_10009059
379 Ga0209967_1002770
380 Ga0209968_1003994
381 Ga0209813_10009655
382 Ga0209813_10199450
383 Ga0209813_10325026
384 Ga0207428_10171161
385 Ga0268266_10082530
386 Ga0268264_10514922
387 Ga0268264_10761296
388 Ga0265327_10020540
389 Ga0307513_10063915
390 Ga0307513_10229691
391 Ga0307408_100716232
392 Ga0307413_10641232
393 Ga0307406_11065133
394 Ga0307412_10099251
395 Ga0307415_100473261
396 Ga0373952_0050272
397 Ga0373932_0064592
398 Ga0373954_0000055
399 Ga0373957_0195653
400 Ga0373955_0197689
401 Ga0373942_0002470
402 Ga0373961_0115471
403 Ga0316574_0290765
404 Ga0373924_0178067
405 Ga0373931_0502425
406 Ga0373933_0004744
407 Ga0373937_0000131
408 Ga0436363_0806093
409 Ga0451793_1380023
410 Ga0451797_0602689
411 Ga0451800_0794191
412 Ga0451804_0203934
413 Ga0451807_2054773
414 Ga0451853_0383426
415 Ga0451853_1165008
416 Ga0439443_012959
417 Ga0439446_0089380
418 Ga0451577_1017898
419 Ga0453684_1350309
420 Ga0453684_1859462
421 Ga0495592_0592261
422 Ga0495651_0563074
423 Ga0495662_0415935
424 Ga0495640_0019880
425 Ga0495640_0832720
426 Ga0495586_0014573
427 Ga0495621_0142280
428 Ga0495621_0552472
429 Ga0495667_0248962
430 Ga0495635_0025308
431 Ga0495657_0059111
432 Ga0495669_0084926
433 Ga0495624_0047197
434 Ga0495602_0295384
435 Ga0496112_0273571
436 Ga0501036_0699446
437 Ga0501038_0090845
438 Ga0501039_0210811
439 Ga0501039_0745176
440 Ga0501039_1050400
441 Ga0501040_0008686
442 Ga0501041_0004330
443 Ga0501041_0520956
444 Ga0501042_0098215
445 Ga0501042_0929334
446 Ga0501046_0054285
447 Ga0501048_0008923
448 Ga0501068_0035844
449 Ga0501071_0046193
450 Ga0501071_0349601
451 Ga0501071_1322441
452 Ga0501072_0004342
453 Ga0501072_0081333
454 Ga0501073_0262131
455 Ga0501074_0682708
456 Ga0501075_0002475
457 Ga0501075_0662331
458 Ga0501076_0001408
459 Ga0501076_0205982
460 Ga0501076_0372783
461 Ga0501211_030790
462 Ga0501079_0007587
463 Ga0501080_0232048
464 Ga0501080_0891517
465 Ga0501081_0003604
466 Ga0501081_0842819
467 Ga0501083_0063656
468 Ga0501035_0486922
469 Ga0501045_0015134
470 Ga0501045_0553933
471 nmdc:mga03n38_413543_c1
472 nmdc:mga00v17_227932_c1
473 nmdc:mga00v17_58590_c1
474 nmdc:mga0k408_17835_c1
475 nmdc:mga0k408_88375_c1
476 nmdc:mga06z11_117877_c1
477 nmdc:mga06z11_21894_c1
478 nmdc:mga04h51_261765_c1
479 nmdc:mga04h51_359927_c1
480 nmdc:mga04h51_5213_c1
481 nmdc:mga04h51_97618_c1
482 nmdc:mga07m45_85729_c1
483 nmdc:mga05p37_653397_c1
484 nmdc:mga09592_169255_c1
485 nmdc:mga09592_872752_c1
486 nmdc:mga0qj67_541904_c1
487 nmdc:mga0qj67_59903_c1
488 nmdc:mga06r32_354449_c1
489 nmdc:mga08y16_250597_c1
490 nmdc:mga0a205_465006_c1
491 Ga0495601_0104644
492 Ga0500577_0096245
493 Ga0500590_001540
494 Ga0501084_0032289
495 Ga0501084_0912289
496 Ga0590071_049230
497 Ga0530510_0003476
498 2885083589

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04073

tRNA_edit

Aminoacyl-tRNA editing domain

34

154

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1dbx-assembly2.cif.gz_B crystal structure of cysteinyl-trna(pro) deacylase from h. influenzae (hi1434) 0.9265 2 151
2dxa-assembly1.cif.gz_A crystal structure of trans editing enzyme prox from e.coli 0.9256 2 151
1dbu-assembly1.cif.gz_A crystal structure of cysteinyl-trna(pro) deacylase protein from h. influenzae (hi1434) 0.9176 2 151
2dxa-assembly1.cif.gz_A crystal structure of trans editing enzyme prox from e.coli 0.9141 2 151
1wdv-assembly2.cif.gz_B crystal structure of hypothetical protein ape2540 0.9111 1 151
ID Description Score Start End Superfamily
af_Q2G0A0_1_158_3.90.960.10 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.9377 2 149 3.90.960.10
1dbxB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.9225 2 151 3.90.960.10
1wdvB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.9182 1 151 3.90.960.10
af_Q2G0A0_1_158_3.90.960.10 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.914 2 149 3.90.960.10
1wdvB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.9124 1 151 3.90.960.10
ID Description Score Start End GO Terms
AF-A0A1S5Y1X2-F1-model_v4 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein 1.002 2 151 GO:0002161
GO:0006412
GO:0016829
AF-A0A831RL21-F1-model_v4 Aminoacyl-tRNA deacylase 1.001 2 151 GO:0002161
GO:0006412
GO:0016829
AF-A0A2W5TI96-F1-model_v4 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase (EC 4.2.-.-) 0.9998 2 151 GO:0002161
GO:0006412
GO:0016829
AF-A0A5E4U699-F1-model_v4 Aminoacyl-tRNA deacylase 0.9987 2 151 GO:0002161
GO:0006412
GO:0016829
AF-A0A5E5B0W4-F1-model_v4 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase (EC 4.2.-.-) 0.9987 2 151 GO:0002161
GO:0006412
GO:0016829

Map