F360336

General Info

Members Datasets Scaffolds Average Seq Length
248 183 496 414

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2901300506|2901300556
Length 454
Sequence QLDFIPAIGTADFTPQQARLLALANRLGRERFAARAATWDREASFPFANYDDLREAGLLALCVPQAFGGEGADFATYCMVGAEIGRFCGATALTYNMHICSTMWTGVLSDGIDMTPDQRAEHEARRELHFSRVVRDGAVYAQPFSEGSAAAAGKAPFGTTARKVDGGWVLNGRKIFASLSGAADYYGILCTEDRGDQHPDMRDTLYIAVPGKAQGLTVTGEWDPMGMRGTVSRTLLLKDVFVPDQEQLMPRGVYYRAAQTWPAMFFTLSPTYLGVAQAAYDFTVQYLRGEVPGQPPVKRRMYPTKQIAVAQMRIQLETMRSIFWRVIHEARPNPTKDERLRLYAAHYTVMEGANDIARLAIRTCGGQSMLKDLPLERLYRDSRCGALMLPWTAELILDRMGARPCTNPASATNERHQPRQACGAPGWAMPPAPSRWAWPMTMCTSARRQTRLRS

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
60 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
92 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
93 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
94 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
95 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
96 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
97 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
98 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
99 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
100 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
101 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
102 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
103 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
104 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
105 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
106 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
107 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
108 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
113 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
114 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
115 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
116 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
117 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
118 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
119 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
120 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
121 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
122 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
123 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
124 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
125 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
126 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
127 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
128 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
129 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
130 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
131 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
132 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
133 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
134 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
135 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
136 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
137 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
138 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
154 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
155 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
156 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
159 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
160 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
161 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
162 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
163 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
164 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
171 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
172 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
173 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
174 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
175 2901300506 Cupriavidus sp. UYMSc13B Isolate Unclassified
176 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
177 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
178 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
179 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
180 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
181 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
182 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule
183 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.37
Metatranscriptomes 0
Isolates 3.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.47
Nodule 1.21
Rhizoplane 2.02
Rhizosphere 81.45
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100072684 3300005329 Bacteria 3211
2 Ga0068869_100020364 3300005334 Bacteria 4548
3 Ga0070680_100188880 3300005336 Bacteria 1736
4 Ga0068868_100014051 3300005338 Bacteria 5892
5 Ga0070689_100074416 3300005340 Bacteria 2658
6 Ga0070668_100017413 3300005347 Bacteria 5384
7 Ga0070669_100171410 3300005353 Bacteria 1692
8 Ga0070675_100208233 3300005354 Bacteria 1699
9 Ga0070694_100000984 3300005444 Bacteria 16185
10 Ga0070694_100043096 3300005444 Bacteria 3016
11 Ga0070678_100065534 3300005456 Bacteria 2697
12 Ga0070662_100014244 3300005457 Bacteria 5308
13 Ga0070662_100029443 3300005457 Bacteria 3832
14 Ga0068867_100044868 3300005459 Bacteria 3240
15 Ga0070685_10086622 3300005466 Bacteria 1889
16 Ga0070706_100093584 3300005467 Bacteria 2788
17 Ga0070679_100014226 3300005530 Bacteria 7638
18 Ga0070679_100065973 3300005530 Bacteria 3608
19 Ga0068853_100007535 3300005539 Bacteria 8709
20 Ga0068853_100247577 3300005539 Bacteria 1635
21 Ga0070686_100043168 3300005544 Bacteria 2828
22 Ga0070695_100001092 3300005545 Bacteria 14841
23 Ga0070704_100052081 3300005549 Bacteria 2886
24 Ga0068855_100032631 3300005563 Bacteria 6217
25 Ga0068855_100095128 3300005563 Bacteria 3434
26 Ga0068857_100013470 3300005577 Bacteria 7123
27 Ga0068857_100083303 3300005577 Bacteria 2857
28 Ga0068854_100117914 3300005578 Bacteria 2010
29 Ga0068864_100048688 3300005618 Bacteria 3644
30 Ga0068864_100086029 3300005618 Bacteria 2765
31 Ga0068861_100032813 3300005719 Bacteria 3826
32 Ga0068863_100037139 3300005841 Bacteria 4639
33 Ga0068858_100149042 3300005842 Bacteria 2199
34 Ga0081538_10022926 3300005981 Bacteria 4504
35 Ga0081538_10041114 3300005981 Bacteria 2939
36 Ga0081539_10000997 3300005985 Bacteria 52514
37 Ga0075365_10108788 3300006038 Bacteria 1903
38 Ga0075363_100070694 3300006048 Bacteria 1896
39 Ga0075362_10002053 3300006177 Bacteria 6642
40 Ga0075362_10022373 3300006177 Bacteria 2663
41 Ga0075367_10014488 3300006178 Bacteria 4269
42 Ga0075369_10034465 3300006186 Bacteria 2149
43 Ga0075366_10029199 3300006195 Bacteria 3239
44 Ga0075366_10044310 3300006195 Bacteria 2636
45 Ga0075366_10086488 3300006195 Bacteria 1875
46 Ga0075366_10114085 3300006195 Bacteria 1627
47 Ga0097621_100053234 3300006237 Bacteria 3299
48 Ga0075370_10011231 3300006353 Bacteria 4700
49 Ga0068871_100026308 3300006358 Bacteria 4538
50 Ga0075428_100035812 3300006844 Bacteria 5471
51 Ga0075430_100006045 3300006846 Bacteria 10209
52 Ga0075430_100022677 3300006846 Bacteria 5341
53 Ga0075431_100045386 3300006847 Bacteria 4530
54 Ga0068865_100068033 3300006881 Bacteria 2517
55 Ga0068865_100117231 3300006881 Bacteria 1974
56 Ga0105240_10005969 3300009093 Bacteria 18019
57 Ga0105240_10065613 3300009093 Bacteria 4506
58 Ga0111539_10012637 3300009094 Bacteria 10577
59 Ga0111539_10033369 3300009094 Bacteria 6249
60 Ga0111539_10100576 3300009094 Bacteria 3395
61 Ga0105245_10281066 3300009098 Bacteria 1626
62 Ga0105243_10226970 3300009148 Bacteria 1654
63 Ga0105241_10006760 3300009174 Bacteria 8437
64 Ga0105242_10020587 3300009176 Bacteria 5174
65 Ga0105248_10007003 3300009177 Bacteria 12349
66 Ga0105248_10144221 3300009177 Bacteria 2687
67 Ga0105237_10061145 3300009545 Bacteria 3766
68 Ga0105238_10007208 3300009551 Bacteria 11130
69 Ga0105239_10023198 3300010375 Bacteria 6839
70 Ga0105239_10268612 3300010375 Bacteria 1918
71 Ga0105246_10041491 3300011119 Bacteria 3110
72 Ga0163162_10137923 3300013306 Bacteria 2550
73 Ga0163162_10302778 3300013306 Bacteria 1731
74 Ga0157375_10007480 3300013308 Bacteria 9555
75 Ga0157375_10207785 3300013308 Bacteria 2115
76 Ga0157375_10284117 3300013308 Bacteria 1818
77 Ga0157380_10342663 3300014326 Bacteria 1395
78 Ga0157376_10065694 3300014969 Bacteria 3065
79 Ga0213873_10004666 3300021358 Bacteria 2574
80 Ga0213876_10001576 3300021384 Bacteria 14013
81 Ga0213875_10000931 3300021388 Bacteria 21099
82 Ga0209025_1000523 3300025294 Bacteria 73071
83 Ga0207707_10007933 3300025912 Bacteria 9234
84 Ga0207660_10023104 3300025917 Bacteria 4196
85 Ga0207662_10048849 3300025918 Bacteria 2508
86 Ga0207652_10049000 3300025921 Bacteria 3614
87 Ga0207681_10108867 3300025923 Bacteria 2012
88 Ga0207687_10053366 3300025927 Bacteria 2824
89 Ga0207706_10009945 3300025933 Bacteria 8719
90 Ga0207706_10010234 3300025933 Bacteria 8578
91 Ga0207706_10057724 3300025933 Bacteria 3419
92 Ga0207669_10036376 3300025937 Bacteria 2813
93 Ga0207691_10031437 3300025940 Bacteria 4955
94 Ga0207711_10084128 3300025941 Bacteria 2784
95 Ga0207711_10213237 3300025941 Bacteria 1764
96 Ga0207689_10000820 3300025942 Bacteria 29947
97 Ga0207661_10131645 3300025944 Bacteria 2143
98 Ga0207667_10050521 3300025949 Bacteria 4387
99 Ga0207712_10053706 3300025961 Bacteria 2828
100 Ga0207668_10010235 3300025972 Bacteria 5662
101 Ga0207677_10114012 3300026023 Bacteria 2019
102 Ga0207703_10094607 3300026035 Bacteria 2519
103 Ga0207639_10012733 3300026041 Bacteria 5867
104 Ga0207641_10044227 3300026088 Bacteria 3745
105 Ga0207648_10009871 3300026089 Bacteria 9102
106 Ga0207676_10085067 3300026095 Bacteria 2580
107 Ga0207674_10007918 3300026116 Bacteria 12341
108 Ga0207674_10056110 3300026116 Bacteria 4001
109 Ga0207675_100050075 3300026118 Bacteria 3898
110 Ga0207675_100065048 3300026118 Bacteria 3408
111 Ga0209981_1004183 3300027378 Bacteria 1886
112 Ga0209999_1008781 3300027543 Bacteria 1827
113 Ga0209970_1000069 3300027614 Bacteria 14105
114 Ga0209588_1008791 3300027671 Bacteria 3004
115 Ga0207428_10071484 3300027907 Bacteria 2725
116 Ga0268265_10012237 3300028380 Bacteria 5811
117 Ga0268264_10163305 3300028381 Bacteria 2008
118 Ga0307515_10000417 3300028794 Bacteria 102343
119 Ga0307515_10001485 3300028794 Bacteria 52672
120 Ga0307515_10067229 3300028794 Bacteria 4947
121 Ga0307515_10103680 3300028794 Bacteria 3407
122 Ga0265330_10006688 3300031235 Bacteria 5686
123 Ga0265332_10001070 3300031238 Bacteria 15993
124 Ga0265332_10013831 3300031238 Bacteria 3572
125 Ga0265320_10065212 3300031240 Bacteria 1728
126 Ga0265329_10014141 3300031242 Bacteria 2822
127 Ga0265340_10001990 3300031247 Bacteria 11687
128 Ga0265331_10031591 3300031250 Bacteria 2630
129 Ga0307513_10000019 3300031456 Bacteria 231194
130 Ga0316575_10058016 3300031665 Bacteria 1544
131 Ga0265342_10000039 3300031712 Bacteria 140091
132 Ga0265342_10070150 3300031712 Bacteria 2045
133 Ga0307516_10000525 3300031730 Bacteria 51244
134 Ga0307516_10005264 3300031730 Bacteria 15570
135 Ga0373959_0004249 3300034820 Bacteria 2303
136 Ga0373932_0005432 3300035112 Bacteria 2998
137 Ga0373962_0010239 3300035242 Bacteria 2334
138 Ga0316574_0039627 3300035398 Bacteria 2898
139 Ga0373924_0010092 3300035410 Bacteria 3476
140 Ga0373931_0021428 3300035691 Bacteria 3243
141 Ga0373935_0029704 3300035692 Bacteria 3383
142 Ga0373925_0030943 3300037068 Bacteria 3931
143 Ga0395899_0020911 3300037312 Bacteria 4963
144 Ga0395899_0022590 3300037312 Bacteria 4765
145 Ga0395900_0014556 3300037418 Bacteria 8026
146 Ga0395900_0019658 3300037418 Bacteria 6886
147 Ga0395900_0028221 3300037418 Bacteria 5749
148 Ga0395900_0033479 3300037418 Bacteria 5288
149 Ga0395900_0409659 3300037418 Bacteria 1318
150 Ga0395898_0014217 3300037466 Bacteria 8183
151 Ga0395898_0026097 3300037466 Bacteria 5882
152 Ga0395905_0000078 3300037471 Bacteria 161593
153 Ga0395905_0000722 3300037471 Bacteria 43605
154 Ga0395905_0018404 3300037471 Bacteria 6629
155 Ga0395905_0031329 3300037471 Bacteria 5006
156 Ga0395905_0048614 3300037471 Bacteria 3975
157 Ga0395905_0088777 3300037471 Bacteria 2897
158 Ga0395905_0193332 3300037471 Bacteria 1908
159 Ga0436364_0073909 3300037853 Bacteria 9825
160 Ga0436364_0564074 3300037853 Bacteria 1992
161 Ga0395901_0011050 3300038443 Bacteria 9147
162 Ga0395901_0023535 3300038443 Bacteria 6316
163 Ga0395901_0029857 3300038443 Bacteria 5614
164 Ga0395901_0216243 3300038443 Bacteria 2005
165 Ga0436365_0256244 3300039437 Bacteria 18770
166 Ga0436363_1650454 3300039450 Bacteria 6186
167 Ga0436362_0210731 3300039453 Bacteria 7096
168 Ga0439446_0001135 3300042156 Bacteria 5905
169 Ga0450893_0002034 3300042532 Bacteria 3150
170 Ga0451577_0011616 3300042876 Bacteria 8317
171 Ga0451577_0304826 3300042876 Bacteria 1443
172 Ga0466969_0006676 3300044656 Bacteria 6132
173 Ga0466969_0046032 3300044656 Bacteria 2164
174 Ga0466972_0000323 3300044658 Bacteria 27151
175 Ga0466977_0003299 3300044666 Bacteria 7778
176 Ga0466966_0001232 3300044684 Bacteria 16429
177 Ga0466961_0010747 3300044693 Bacteria 5848
178 Ga0453684_0325231 3300044712 Bacteria 1740
179 Ga0451576_0056400 3300045051 Bacteria 4108
180 Ga0495638_0005080 3300046460 Bacteria 9863
181 Ga0495594_0202653 3300046499 Bacteria 1131
182 Ga0495640_0242128 3300046533 Bacteria 1132
183 Ga0495656_0086745 3300046615 Bacteria 1424
184 Ga0495659_0011904 3300046664 Bacteria 2806
185 Ga0496102_0021214 3300048905 Bacteria 5744
186 Ga0496104_0000411 3300048907 Bacteria 37562
187 Ga0496105_0035243 3300048908 Bacteria 4119
188 Ga0496109_0244922 3300048912 Bacteria 1688
189 Ga0496110_0149552 3300048913 Bacteria 2114
190 Ga0501033_0091346 3300049570 Bacteria 2227
191 Ga0501034_0000169 3300049571 Bacteria 122591
192 Ga0501034_0185319 3300049571 Bacteria 2045
193 Ga0501036_0036024 3300049572 Bacteria 4187
194 Ga0501038_0108925 3300049574 Bacteria 2296
195 Ga0501039_0022172 3300049575 Bacteria 4874
196 Ga0501040_0044049 3300049576 Bacteria 3042
197 Ga0501041_0007121 3300049577 Bacteria 6561
198 Ga0501041_0123270 3300049577 Bacteria 1612
199 Ga0501043_0067750 3300049579 Bacteria 2803
200 Ga0501046_0012741 3300049580 Bacteria 7153
201 Ga0501046_0118094 3300049580 Bacteria 2020
202 Ga0501047_0059260 3300049581 Bacteria 3696
203 Ga0501048_0091302 3300049582 Bacteria 2148
204 Ga0501071_0015383 3300049587 Bacteria 5252
205 Ga0501071_0146134 3300049587 Bacteria 1762
206 Ga0501072_0005268 3300049588 Bacteria 9849
207 Ga0501072_0020496 3300049588 Bacteria 5124
208 Ga0501072_0159219 3300049588 Bacteria 1801
209 Ga0501073_0079350 3300049589 Bacteria 2285
210 Ga0501073_0115427 3300049589 Bacteria 1861
211 Ga0501075_0032095 3300049591 Bacteria 3900
212 Ga0501075_0055208 3300049591 Bacteria 2989
213 Ga0501076_0000748 3300049592 Bacteria 21024
214 Ga0501077_0039457 3300049593 Bacteria 3008
215 Ga0501077_0111029 3300049593 Bacteria 1738
216 Ga0501079_0001936 3300049741 Bacteria 14822
217 Ga0501080_0002585 3300049742 Bacteria 15855
218 Ga0501080_0015155 3300049742 Bacteria 7101
219 Ga0501081_0010703 3300049743 Bacteria 5991
220 Ga0501081_0014951 3300049743 Bacteria 5120
221 Ga0501045_0005110 3300049824 Bacteria 9077
222 nmdc:mga03683_58219_c1 3300050489 Bacteria 1628
223 nmdc:mga03n38_67816_c1 3300050490 Bacteria 1643
224 nmdc:mga00v17_25825_c1 3300050491 Bacteria 3417
225 nmdc:mga0yw44_40033_c1 3300050492 Bacteria 2782
226 nmdc:mga0k408_14922_c1 3300050493 Bacteria 4290
227 nmdc:mga0k408_30348_c1 3300050493 Bacteria 3082
228 nmdc:mga07m45_15216_c1 3300050496 Bacteria 4107
229 nmdc:mga05p37_242794_c1 3300050507 Bacteria 2164
230 nmdc:mga0qj67_2113_c1 3300050509 Bacteria 14163
231 nmdc:mga06r32_9842_c1 3300050510 Bacteria 8626
232 nmdc:mga08y16_128972_c1 3300050511 Bacteria 2631
233 nmdc:mga08y16_93663_c1 3300050511 Bacteria 3129
234 nmdc:mga0sz30_26156_c1 3300050516 Bacteria 2390
235 Ga0500616_0072340 3300053153 Bacteria 1753
236 Ga0501084_0020386 3300054114 Bacteria 5529
237 Ga0501082_0004033 3300060353 Bacteria 12819
238 Ga0530510_0004546 3300061734 Bacteria 9601
239 Ga0530510_0019963 3300061734 Bacteria 4762
240 2901300556 2901300506 Bacteria 8463898
241 2513955826 2513237150 Bacteria 6553639
242 2514041230 2513237165 Bacteria 6771773
243 2723879174 2721755763 Bacteria 4464185
244 2834641416 2834641062 Bacteria 5559922
245 2895514807 2895511927 Bacteria 6802080
246 2919708185 2919704043 Bacteria 5560311
247 644748613 644736347 Bacteria 6476522
248 8003403675 8003400568 Bacteria 5535898
249 Ga0070683_100072684
250 Ga0068869_100020364
251 Ga0070680_100188880
252 Ga0068868_100014051
253 Ga0070689_100074416
254 Ga0070668_100017413
255 Ga0070669_100171410
256 Ga0070675_100208233
257 Ga0070694_100000984
258 Ga0070694_100043096
259 Ga0070678_100065534
260 Ga0070662_100014244
261 Ga0070662_100029443
262 Ga0068867_100044868
263 Ga0070685_10086622
264 Ga0070706_100093584
265 Ga0070679_100014226
266 Ga0070679_100065973
267 Ga0068853_100007535
268 Ga0068853_100247577
269 Ga0070686_100043168
270 Ga0070695_100001092
271 Ga0070704_100052081
272 Ga0068855_100032631
273 Ga0068855_100095128
274 Ga0068857_100013470
275 Ga0068857_100083303
276 Ga0068854_100117914
277 Ga0068864_100048688
278 Ga0068864_100086029
279 Ga0068861_100032813
280 Ga0068863_100037139
281 Ga0068858_100149042
282 Ga0081538_10022926
283 Ga0081538_10041114
284 Ga0081539_10000997
285 Ga0075365_10108788
286 Ga0075363_100070694
287 Ga0075362_10002053
288 Ga0075362_10022373
289 Ga0075367_10014488
290 Ga0075369_10034465
291 Ga0075366_10029199
292 Ga0075366_10044310
293 Ga0075366_10086488
294 Ga0075366_10114085
295 Ga0097621_100053234
296 Ga0075370_10011231
297 Ga0068871_100026308
298 Ga0075428_100035812
299 Ga0075430_100006045
300 Ga0075430_100022677
301 Ga0075431_100045386
302 Ga0068865_100068033
303 Ga0068865_100117231
304 Ga0105240_10005969
305 Ga0105240_10065613
306 Ga0111539_10012637
307 Ga0111539_10033369
308 Ga0111539_10100576
309 Ga0105245_10281066
310 Ga0105243_10226970
311 Ga0105241_10006760
312 Ga0105242_10020587
313 Ga0105248_10007003
314 Ga0105248_10144221
315 Ga0105237_10061145
316 Ga0105238_10007208
317 Ga0105239_10023198
318 Ga0105239_10268612
319 Ga0105246_10041491
320 Ga0163162_10137923
321 Ga0163162_10302778
322 Ga0157375_10007480
323 Ga0157375_10207785
324 Ga0157375_10284117
325 Ga0157380_10342663
326 Ga0157376_10065694
327 Ga0213873_10004666
328 Ga0213876_10001576
329 Ga0213875_10000931
330 Ga0209025_1000523
331 Ga0207707_10007933
332 Ga0207660_10023104
333 Ga0207662_10048849
334 Ga0207652_10049000
335 Ga0207681_10108867
336 Ga0207687_10053366
337 Ga0207706_10009945
338 Ga0207706_10010234
339 Ga0207706_10057724
340 Ga0207669_10036376
341 Ga0207691_10031437
342 Ga0207711_10084128
343 Ga0207711_10213237
344 Ga0207689_10000820
345 Ga0207661_10131645
346 Ga0207667_10050521
347 Ga0207712_10053706
348 Ga0207668_10010235
349 Ga0207677_10114012
350 Ga0207703_10094607
351 Ga0207639_10012733
352 Ga0207641_10044227
353 Ga0207648_10009871
354 Ga0207676_10085067
355 Ga0207674_10007918
356 Ga0207674_10056110
357 Ga0207675_100050075
358 Ga0207675_100065048
359 Ga0209981_1004183
360 Ga0209999_1008781
361 Ga0209970_1000069
362 Ga0209588_1008791
363 Ga0207428_10071484
364 Ga0268265_10012237
365 Ga0268264_10163305
366 Ga0307515_10000417
367 Ga0307515_10001485
368 Ga0307515_10067229
369 Ga0307515_10103680
370 Ga0265330_10006688
371 Ga0265332_10001070
372 Ga0265332_10013831
373 Ga0265320_10065212
374 Ga0265329_10014141
375 Ga0265340_10001990
376 Ga0265331_10031591
377 Ga0307513_10000019
378 Ga0316575_10058016
379 Ga0265342_10000039
380 Ga0265342_10070150
381 Ga0307516_10000525
382 Ga0307516_10005264
383 Ga0373959_0004249
384 Ga0373932_0005432
385 Ga0373962_0010239
386 Ga0316574_0039627
387 Ga0373924_0010092
388 Ga0373931_0021428
389 Ga0373935_0029704
390 Ga0373925_0030943
391 Ga0395899_0020911
392 Ga0395899_0022590
393 Ga0395900_0014556
394 Ga0395900_0019658
395 Ga0395900_0028221
396 Ga0395900_0033479
397 Ga0395900_0409659
398 Ga0395898_0014217
399 Ga0395898_0026097
400 Ga0395905_0000078
401 Ga0395905_0000722
402 Ga0395905_0018404
403 Ga0395905_0031329
404 Ga0395905_0048614
405 Ga0395905_0088777
406 Ga0395905_0193332
407 Ga0436364_0073909
408 Ga0436364_0564074
409 Ga0395901_0011050
410 Ga0395901_0023535
411 Ga0395901_0029857
412 Ga0395901_0216243
413 Ga0436365_0256244
414 Ga0436363_1650454
415 Ga0436362_0210731
416 Ga0439446_0001135
417 Ga0450893_0002034
418 Ga0451577_0011616
419 Ga0451577_0304826
420 Ga0466969_0006676
421 Ga0466969_0046032
422 Ga0466972_0000323
423 Ga0466977_0003299
424 Ga0466966_0001232
425 Ga0466961_0010747
426 Ga0453684_0325231
427 Ga0451576_0056400
428 Ga0495638_0005080
429 Ga0495594_0202653
430 Ga0495640_0242128
431 Ga0495656_0086745
432 Ga0495659_0011904
433 Ga0496102_0021214
434 Ga0496104_0000411
435 Ga0496105_0035243
436 Ga0496109_0244922
437 Ga0496110_0149552
438 Ga0501033_0091346
439 Ga0501034_0000169
440 Ga0501034_0185319
441 Ga0501036_0036024
442 Ga0501038_0108925
443 Ga0501039_0022172
444 Ga0501040_0044049
445 Ga0501041_0007121
446 Ga0501041_0123270
447 Ga0501043_0067750
448 Ga0501046_0012741
449 Ga0501046_0118094
450 Ga0501047_0059260
451 Ga0501048_0091302
452 Ga0501071_0015383
453 Ga0501071_0146134
454 Ga0501072_0005268
455 Ga0501072_0020496
456 Ga0501072_0159219
457 Ga0501073_0079350
458 Ga0501073_0115427
459 Ga0501075_0032095
460 Ga0501075_0055208
461 Ga0501076_0000748
462 Ga0501077_0039457
463 Ga0501077_0111029
464 Ga0501079_0001936
465 Ga0501080_0002585
466 Ga0501080_0015155
467 Ga0501081_0010703
468 Ga0501081_0014951
469 Ga0501045_0005110
470 nmdc:mga03683_58219_c1
471 nmdc:mga03n38_67816_c1
472 nmdc:mga00v17_25825_c1
473 nmdc:mga0yw44_40033_c1
474 nmdc:mga0k408_14922_c1
475 nmdc:mga0k408_30348_c1
476 nmdc:mga07m45_15216_c1
477 nmdc:mga05p37_242794_c1
478 nmdc:mga0qj67_2113_c1
479 nmdc:mga06r32_9842_c1
480 nmdc:mga08y16_128972_c1
481 nmdc:mga08y16_93663_c1
482 nmdc:mga0sz30_26156_c1
483 Ga0500616_0072340
484 Ga0501084_0020386
485 Ga0501082_0004033
486 Ga0530510_0004546
487 Ga0530510_0019963
488 2901300556
489 2513955826
490 2514041230
491 2723879174
492 2834641416
493 2895514807
494 2919708185
495 644748613
496 8003403675

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

14

114

0.93

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

266

388

0.93

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

266

389

0.87

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

144

240

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4o5m-assembly1.cif.gz_C x-ray crystal structure of isovaleryl-coa dehydrogenase from brucella suis 0.8866 21 410
4kto-assembly1.cif.gz_B crystal structure of a putative isovaleryl-coa dehydrogenase (psi-nysgrc-012251) from sinorhizobium meliloti 1021 0.8755 13 410
1rx0-assembly1.cif.gz_C crystal structure of isobutyryl-coa dehydrogenase complexed with substrate/ligand. 0.8746 23 412
3pfd-assembly5.cif.gz_D crystal structure of an acyl-coa dehydrogenase from mycobacterium thermoresistibile bound to reduced flavin adenine dinucleotide solved by combined iodide ion sad mr 0.8735 27 411
7xp7-assembly1.cif.gz_A crystal structure of the flavoprotein colb1 catalyzing assembly line-tethered cysteine dehydrogenation 0.8725 27 411
ID Description Score Start End Superfamily
4o5mC01 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9286 21 109 1.10.540.10
5lvwA02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.917 150 252 2.40.110.10
af_Q0DCC7_1_83_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9101 169 253 2.40.110.10
af_Q2FVW7_140_230_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9072 161 253 2.40.110.10
5lnxD01 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9003 29 103 1.10.540.10
ID Description Score Start End GO Terms
AF-A0A5M8AA98-F1-model_v4 Acyl-CoA dehydrogenase 0.9753 13 418 GO:0003995
GO:0050660
AF-A0A7W6M9N1-F1-model_v4 Acyl-CoA dehydrogenase 0.9646 16 412 GO:0003995
GO:0050660
AF-A0A5M8AA98-F1-model_v4 Acyl-CoA dehydrogenase 0.9544 13 418 GO:0003995
GO:0050660
AF-A0A539DZL2-F1-model_v4 BEC protein 0.954 284 414 GO:0003995
GO:0005737
GO:0033539
AF-A0A7K2CVV9-F1-model_v4 Acyl-CoA dehydrogenase 0.9345 174 418 GO:0003995
GO:0016020

Map