F360315

General Info

Members Datasets Scaffolds Average Seq Length
248 146 247 250

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2585428157|2588107903
Length 280
Sequence STDAALPAVSLGRRRAQRRRATRRDAMLTVVLPIAVAVIVLVLWQTYVSVSGISPLSLPSPADVAAGIVANAELLLANSWTTLQAVLLGYIAAVILGVVTAAVIHSSRLAEKALTPWLIVSQMIPLPAIAPLFVLWTGFDIRPRLMLIALVCFFPIAVNMVDGLRTADPALLNVLRTMRATRWQRFRMAQLPAALPLTFSGLRIAAAFAVLGAVFGEWVGSNSGLGYLIIAFNSQLRTGDMLGVVVVLSAIGIALYGLVTLIERIALPWYHVERRRDRKG

Samples

Sample ID Description Type Environment
1 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
2 3300000531 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNB_Illumina_Assembled Metagenome Rhizosphere
3 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
32 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
76 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
77 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
78 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
81 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
86 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
93 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
94 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
95 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
96 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
97 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
98 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
99 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
100 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
101 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
102 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
103 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
118 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
119 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
120 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
121 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
122 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
123 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
124 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
127 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
128 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
129 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
130 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
133 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
134 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
137 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
138 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
139 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
140 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
141 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
142 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
143 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
144 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
145 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.19
Metatranscriptomes 0.4
Isolates 0.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.08
Nodule 0
Rhizoplane 3.23
Rhizosphere 86.29
Stem 0
Stem Tuber 0
Unclassified 0.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNBas_1004306 3300000531 Bacteria 804
2 LJQas_1001379 3300000549 Bacteria 3642
3 JGI25407J50210_10000782 3300003373 Bacteria 6722
4 JGI25407J50210_10001131 3300003373 Bacteria 5876
5 JGI25407J50210_10002794 3300003373 Bacteria 4150
6 JGI25407J50210_10008339 3300003373 Bacteria 2612
7 Ga0070658_10123255 3300005327 Bacteria 2155
8 Ga0070683_100017901 3300005329 Bacteria 6264
9 Ga0070683_100084180 3300005329 Bacteria 2980
10 Ga0070680_100003289 3300005336 Bacteria 12060
11 Ga0070682_100030753 3300005337 Bacteria 3244
12 Ga0070691_10043076 3300005341 Bacteria 2138
13 Ga0070661_100224852 3300005344 Bacteria 1441
14 Ga0070661_100230901 3300005344 Bacteria 1422
15 Ga0070692_10088806 3300005345 Bacteria 1677
16 Ga0070668_100002340 3300005347 Bacteria 13926
17 Ga0070659_100011836 3300005366 Bacteria 6457
18 Ga0070700_100203538 3300005441 Bacteria 1392
19 Ga0070694_100337527 3300005444 Bacteria 1164
20 Ga0070663_100418156 3300005455 Bacteria 1099
21 Ga0070662_100004478 3300005457 Bacteria 8845
22 Ga0070681_10005510 3300005458 Bacteria 12228
23 Ga0070681_10129823 3300005458 Bacteria 2452
24 Ga0070681_10153551 3300005458 Bacteria 2228
25 Ga0070679_100006422 3300005530 Bacteria 10950
26 Ga0070679_100132047 3300005530 Bacteria 2478
27 Ga0070679_100135700 3300005530 Bacteria 2442
28 Ga0070679_100663400 3300005530 Bacteria 986
29 Ga0070684_100020309 3300005535 Bacteria 5511
30 Ga0070695_100534088 3300005545 Bacteria 912
31 Ga0070704_100126369 3300005549 Bacteria 1974
32 Ga0070664_100097624 3300005564 Bacteria 2551
33 Ga0070664_100134840 3300005564 Bacteria 2170
34 Ga0068857_100094986 3300005577 Bacteria 2670
35 Ga0068854_100363453 3300005578 Bacteria 1188
36 Ga0068856_100025491 3300005614 Bacteria 5767
37 Ga0068852_100005572 3300005616 Bacteria 9028
38 Ga0068866_10254744 3300005718 Bacteria 1076
39 Ga0068861_100026935 3300005719 Bacteria 4183
40 Ga0081455_10013129 3300005937 Bacteria 8210
41 Ga0081455_10058863 3300005937 Bacteria 3248
42 Ga0081538_10000067 3300005981 Bacteria 97828
43 Ga0081538_10000084 3300005981 Bacteria 90336
44 Ga0081538_10000123 3300005981 Bacteria 78578
45 Ga0081538_10000125 3300005981 Bacteria 77932
46 Ga0081538_10001633 3300005981 Bacteria 22992
47 Ga0081538_10003515 3300005981 Bacteria 14759
48 Ga0081538_10010870 3300005981 Bacteria 7424
49 Ga0081538_10014097 3300005981 Bacteria 6280
50 Ga0081538_10018050 3300005981 Bacteria 5322
51 Ga0081538_10018414 3300005981 Bacteria 5245
52 Ga0081538_10025408 3300005981 Bacteria 4178
53 Ga0081538_10033366 3300005981 Bacteria 3429
54 Ga0081538_10085402 3300005981 Bacteria 1658
55 Ga0081538_10197183 3300005981 Bacteria 834
56 Ga0081540_1029508 3300005983 Bacteria 3053
57 Ga0075365_10000853 3300006038 Bacteria 12664
58 Ga0075365_10003005 3300006038 Bacteria 8545
59 Ga0075365_10158463 3300006038 Bacteria 1576
60 Ga0075368_10014651 3300006042 Bacteria 2900
61 Ga0075363_100033358 3300006048 Bacteria 2680
62 Ga0075364_10046874 3300006051 Bacteria 2814
63 Ga0075364_10113467 3300006051 Bacteria 1810
64 Ga0075367_10004385 3300006178 Bacteria 6885
65 Ga0075428_100014027 3300006844 Bacteria 8918
66 Ga0075428_100042812 3300006844 Bacteria 4979
67 Ga0075428_100215873 3300006844 Bacteria 2072
68 Ga0075428_100256956 3300006844 Bacteria 1882
69 Ga0075428_100270361 3300006844 Bacteria 1829
70 Ga0075430_100000877 3300006846 Bacteria 23612
71 Ga0075430_100048550 3300006846 Bacteria 3584
72 Ga0075430_100089292 3300006846 Bacteria 2579
73 Ga0075431_100049697 3300006847 Bacteria 4323
74 Ga0075431_100176277 3300006847 Bacteria 2196
75 Ga0075431_100499381 3300006847 Bacteria 1208
76 Ga0075429_100028965 3300006880 Bacteria 4810
77 Ga0105240_10036107 3300009093 Bacteria 6362
78 Ga0111539_10140647 3300009094 Bacteria 2826
79 Ga0111539_10350013 3300009094 Bacteria 1719
80 Ga0111539_10439857 3300009094 Bacteria 1518
81 Ga0114129_10004853 3300009147 Bacteria 18980
82 Ga0114129_10189745 3300009147 Bacteria 2792
83 Ga0114129_10291713 3300009147 Bacteria 2177
84 Ga0114129_10312777 3300009147 Bacteria 2090
85 Ga0114129_10519932 3300009147 Bacteria 1552
86 Ga0105237_10058746 3300009545 Bacteria 3849
87 Ga0105238_10010932 3300009551 Bacteria 9126
88 Ga0105238_10531273 3300009551 Bacteria 1179
89 Ga0105249_10001019 3300009553 Bacteria 24774
90 Ga0157370_10004857 3300013104 Bacteria 15262
91 Ga0157369_10018671 3300013105 Bacteria 7774
92 Ga0163162_11122712 3300013306 Bacteria 891
93 Ga0157372_10015654 3300013307 Bacteria 8132
94 Ga0163163_10082574 3300014325 Bacteria 3217
95 Ga0206353_10962585 3300020082 Bacteria 2299
96 Ga0207705_10103698 3300025909 Bacteria 2095
97 Ga0207707_10078290 3300025912 Bacteria 2887
98 Ga0207695_10063879 3300025913 Bacteria 3793
99 Ga0207671_10109425 3300025914 Bacteria 2101
100 Ga0207660_10002251 3300025917 Bacteria 12748
101 Ga0207660_10430845 3300025917 Bacteria 1065
102 Ga0207657_10020029 3300025919 Bacteria 6337
103 Ga0207652_10004237 3300025921 Bacteria 11702
104 Ga0207652_10190502 3300025921 Bacteria 1845
105 Ga0207694_10079423 3300025924 Bacteria 2573
106 Ga0207690_10024953 3300025932 Bacteria 3748
107 Ga0207690_10050886 3300025932 Bacteria 2768
108 Ga0207706_10001024 3300025933 Bacteria 28478
109 Ga0207689_10252816 3300025942 Bacteria 1457
110 Ga0207689_10676937 3300025942 Bacteria 870
111 Ga0207661_10001028 3300025944 Bacteria 18500
112 Ga0207661_10089838 3300025944 Bacteria 2557
113 Ga0207661_10269212 3300025944 Bacteria 1520
114 Ga0207679_10102075 3300025945 Bacteria 2245
115 Ga0207679_10277499 3300025945 Bacteria 1436
116 Ga0207712_10013843 3300025961 Bacteria 5173
117 Ga0207668_10037159 3300025972 Bacteria 3257
118 Ga0207668_10285329 3300025972 Bacteria 1356
119 Ga0207677_10297012 3300026023 Bacteria 1333
120 Ga0207708_10209062 3300026075 Bacteria 1559
121 Ga0207675_100003216 3300026118 Bacteria 16023
122 Ga0207698_10063324 3300026142 Bacteria 2893
123 Ga0209813_10011683 3300027866 Bacteria 2301
124 Ga0307408_100270685 3300031548 Bacteria 1410
125 Ga0307408_100272403 3300031548 Bacteria 1406
126 Ga0307514_10023731 3300031649 Bacteria 4973
127 Ga0307405_10016965 3300031731 Bacteria 3986
128 Ga0307413_10002860 3300031824 Bacteria 7121
129 Ga0307413_10063964 3300031824 Bacteria 2283
130 Ga0307410_10029722 3300031852 Bacteria 3483
131 Ga0307410_10038992 3300031852 Bacteria 3115
132 Ga0307410_10583782 3300031852 Bacteria 930
133 Ga0307406_10005308 3300031901 Bacteria 7049
134 Ga0307406_10034162 3300031901 Bacteria 3118
135 Ga0307407_10009325 3300031903 Bacteria 4563
136 Ga0307407_10405202 3300031903 Bacteria 979
137 Ga0307412_10097751 3300031911 Bacteria 2069
138 Ga0307412_10690870 3300031911 Bacteria 875
139 Ga0307409_100005435 3300031995 Bacteria 7333
140 Ga0307409_100008161 3300031995 Bacteria 6329
141 Ga0307409_100011273 3300031995 Bacteria 5623
142 Ga0307409_100438058 3300031995 Unclassified 1258
143 Ga0307409_100649507 3300031995 Bacteria 1049
144 Ga0307416_100152205 3300032002 Bacteria 2123
145 Ga0307416_100193908 3300032002 Bacteria 1919
146 Ga0307416_100309545 3300032002 Bacteria 1575
147 Ga0307416_100407471 3300032002 Bacteria 1399
148 Ga0307414_10046732 3300032004 Bacteria 2974
149 Ga0307415_100041051 3300032126 Bacteria 3069
150 Ga0307415_100045633 3300032126 Bacteria 2939
151 Ga0307415_100357826 3300032126 Bacteria 1231
152 Ga0395900_0057240 3300037418 Bacteria 4013
153 Ga0395900_0059085 3300037418 Bacteria 3947
154 Ga0395898_0018658 3300037466 Bacteria 7072
155 Ga0395898_0021435 3300037466 Bacteria 6553
156 Ga0395905_0005949 3300037471 Bacteria 12357
157 Ga0395905_0225789 3300037471 Bacteria 1752
158 Ga0395905_0368423 3300037471 Bacteria 1330
159 Ga0395901_0036777 3300038443 Bacteria 5062
160 Ga0395901_0143875 3300038443 Bacteria 2506
161 Ga0395901_0169162 3300038443 Bacteria 2293
162 Ga0395901_0286634 3300038443 Bacteria 1710
163 Ga0395901_0330237 3300038443 Bacteria 1577
164 Ga0466965_0377617 3300044683 Bacteria 780
165 Ga0466966_0192642 3300044684 Bacteria 1235
166 Ga0466963_0510224 3300044694 Unclassified 849
167 Ga0466964_0256427 3300044706 Bacteria 865
168 Ga0466957_0052428 3300044842 Bacteria 2484
169 Ga0466958_0060007 3300045836 Bacteria 2315
170 Ga0466967_0039021 3300045976 Bacteria 4079
171 Ga0466967_0158349 3300045976 Bacteria 2124
172 Ga0466967_0281106 3300045976 Bacteria 1597
173 Ga0466967_0736017 3300045976 Bacteria 978
174 Ga0495584_0110462 3300046491 Bacteria 1391
175 Ga0495596_0107192 3300046500 Bacteria 1085
176 Ga0495620_0101284 3300046515 Bacteria 1148
177 Ga0495609_0256769 3300046538 Unclassified 719
178 Ga0495656_0029526 3300046615 Bacteria 2208
179 Ga0495589_0161808 3300046794 Bacteria 1066
180 Ga0496103_0127309 3300048906 Bacteria 1625
181 Ga0496109_0019401 3300048912 Bacteria 5995
182 Ga0496109_0622523 3300048912 Bacteria 1016
183 Ga0496110_0297493 3300048913 Bacteria 1470
184 Ga0496111_0096218 3300048914 Bacteria 2173
185 Ga0496112_0602025 3300048915 Bacteria 1031
186 Ga0496113_0080517 3300048916 Bacteria 2495
187 Ga0496113_0139152 3300048916 Bacteria 1909
188 Ga0501031_0078936 3300049568 Bacteria 2145
189 Ga0501031_0131935 3300049568 Bacteria 1632
190 Ga0501036_0205875 3300049572 Bacteria 1654
191 Ga0501037_0255045 3300049573 Bacteria 1227
192 Ga0501037_0325847 3300049573 Bacteria 1063
193 Ga0501039_0093351 3300049575 Bacteria 2345
194 Ga0501040_0029662 3300049576 Bacteria 3694
195 Ga0501042_0021954 3300049578 Bacteria 4456
196 Ga0501046_0139174 3300049580 Bacteria 1838
197 Ga0501048_0209987 3300049582 Bacteria 1381
198 Ga0501048_0221107 3300049582 Bacteria 1343
199 Ga0501067_0085450 3300049583 Bacteria 1751
200 Ga0501071_0516377 3300049587 Bacteria 917
201 Ga0501075_0025470 3300049591 Bacteria 4346
202 Ga0501076_0016329 3300049592 Bacteria 5629
203 Ga0501077_0146869 3300049593 Bacteria 1496
204 Ga0501079_0028951 3300049741 Bacteria 4252
205 Ga0501079_0042190 3300049741 Bacteria 3524
206 Ga0501081_0023548 3300049743 Bacteria 4128
207 Ga0501081_0093487 3300049743 Bacteria 2117
208 Ga0501035_0202236 3300049822 Bacteria 1703
209 Ga0501035_0415205 3300049822 Bacteria 1118
210 Ga0501045_0156334 3300049824 Bacteria 1697
211 Ga0501045_0178498 3300049824 Bacteria 1582
212 nmdc:mga03n38_70717_c1 3300050490 Bacteria 1614
213 nmdc:mga00v17_135916_c1 3300050491 Bacteria 1574
214 nmdc:mga00v17_29652_c1 3300050491 Bacteria 3212
215 nmdc:mga0yw44_24846_c1 3300050492 Bacteria 3397
216 nmdc:mga0yw44_28404_c1 3300050492 Bacteria 3217
217 nmdc:mga06z11_222504_c1 3300050494 Bacteria 1103
218 nmdc:mga06z11_40893_c1 3300050494 Bacteria 2317
219 nmdc:mga04h51_10245_c1 3300050495 Bacteria 2569
220 nmdc:mga05p37_136562_c1 3300050507 Bacteria 3006
221 nmdc:mga05p37_197845_c1 3300050507 Bacteria 2436
222 nmdc:mga05p37_263622_c1 3300050507 Bacteria 2061
223 nmdc:mga05p37_3676_c1 3300050507 Bacteria 17933
224 nmdc:mga05p37_855431_c1 3300050507 Unclassified 987
225 nmdc:mga09592_236524_c1 3300050508 Bacteria 1582
226 nmdc:mga09592_69131_c1 3300050508 Bacteria 2996
227 nmdc:mga0qj67_40326_c1 3300050509 Bacteria 3670
228 nmdc:mga0qj67_646_c1 3300050509 Bacteria 24005
229 nmdc:mga06r32_37683_c1 3300050510 Bacteria 4574
230 nmdc:mga06r32_63885_c1 3300050510 Bacteria 3549
231 nmdc:mga08y16_18646_c1 3300050511 Bacteria 7309
232 nmdc:mga08y16_245547_c1 3300050511 Bacteria 1850
233 nmdc:mga08y16_480410_c1 3300050511 Unclassified 1264
234 nmdc:mga0a205_330484_c1 3300050515 Bacteria 1394
235 Ga0500556_0000008 3300053104 Bacteria 304943
236 Ga0500556_0001930 3300053104 Bacteria 7359
237 Ga0500562_017361 3300053108 Bacteria 1855
238 Ga0500593_001435 3300053117 Bacteria 8565
239 Ga0500655_001395 3300053133 Bacteria 4580
240 Ga0500559_0000566 3300053136 Bacteria 25615
241 Ga0500568_0000003 3300053139 Bacteria 863587
242 Ga0500616_0000079 3300053153 Bacteria 200717
243 Ga0501084_0174744 3300054114 Bacteria 1813
244 Ga0501084_0569848 3300054114 Bacteria 957
245 Ga0501082_0023026 3300060353 Bacteria 5370
246 Ga0530510_0056248 3300061734 Bacteria 2842
247 Ga0530510_0576377 3300061734 Bacteria 855

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300025942 Ga0207689_10252816 Ga0207689_102528162 219
2 3300006051 Ga0075364_10113467 Ga0075364_101134672 221
3 3300050511 nmdc:mga08y16_18646_c1 nmdc:mga08y16_18646_c1_33_707 224
4 3300025921 Ga0207652_10190502 Ga0207652_101905022 225
5 3300045976 Ga0466967_0736017 Ga0466967_0736017_111_869 225
6 3300005981 Ga0081538_10001633 Ga0081538_1000163318 229
7 3300031995 Ga0307409_100649507 Ga0307409_1006495072 229
8 3300046538 Ga0495609_0256769 Ga0495609_0256769_16_708 230
9 3300009094 Ga0111539_10350013 Ga0111539_103500132 231
10 3300009147 Ga0114129_10519932 Ga0114129_105199322 231
11 3300048916 Ga0496113_0139152 Ga0496113_0139152_1009_1761 231
12 3300037418 Ga0395900_0057240 Ga0395900_0057240_793_1593 232
13 3300037418 Ga0395900_0059085 Ga0395900_0059085_2716_3516 232
14 3300037466 Ga0395898_0021435 Ga0395898_0021435_1706_2506 232
15 3300037471 Ga0395905_0005949 Ga0395905_0005949_2380_3180 232
16 3300038443 Ga0395901_0143875 Ga0395901_0143875_1266_2066 232
17 3300038443 Ga0395901_0169162 Ga0395901_0169162_424_1224 232
18 3300049824 Ga0501045_0156334 Ga0501045_0156334_568_1311 233
19 3300009094 Ga0111539_10439857 Ga0111539_104398571 234
20 3300050511 nmdc:mga08y16_480410_c1 nmdc:mga08y16_480410_c1_482_1228 234
21 3300006038 Ga0075365_10158463 Ga0075365_101584632 235
22 3300038443 Ga0395901_0330237 Ga0395901_0330237_395_1138 235
23 3300044684 Ga0466966_0192642 Ga0466966_0192642_373_1158 235
24 3300044842 Ga0466957_0052428 Ga0466957_0052428_1207_1992 235
25 3300045836 Ga0466958_0060007 Ga0466958_0060007_1234_2019 235
26 3300009147 Ga0114129_10312777 Ga0114129_103127773 236
27 3300005329 Ga0070683_100084180 Ga0070683_1000841803 237
28 3300005344 Ga0070661_100230901 Ga0070661_1002309012 237
29 3300014325 Ga0163163_10082574 Ga0163163_100825743 237
30 3300025944 Ga0207661_10269212 Ga0207661_102692122 237
31 3300006038 Ga0075365_10000853 Ga0075365_100008532 238
32 3300006051 Ga0075364_10046874 Ga0075364_100468743 238
33 3300045976 Ga0466967_0158349 Ga0466967_0158349_1162_1887 238
34 3300048912 Ga0496109_0019401 Ga0496109_0019401_1889_2632 238
35 3300048914 Ga0496111_0096218 Ga0496111_0096218_315_1058 238
36 3300048916 Ga0496113_0080517 Ga0496113_0080517_1005_1748 238
37 3300050491 nmdc:mga00v17_135916_c1 nmdc:mga00v17_135916_c1_580_1380 238
38 3300050492 nmdc:mga0yw44_28404_c1 nmdc:mga0yw44_28404_c1_726_1526 238
39 3300053104 Ga0500556_0001930 Ga0500556_0001930_5902_6702 238
40 3300053108 Ga0500562_017361 Ga0500562_017361_534_1331 238
41 3300053117 Ga0500593_001435 Ga0500593_001435_5574_6374 238
42 3300053133 Ga0500655_001395 Ga0500655_001395_3198_3998 238
43 3300053136 Ga0500559_0000566 Ga0500559_0000566_10160_10957 238
44 3300005981 Ga0081538_10018414 Ga0081538_100184145 240
45 3300044683 Ga0466965_0377617 Ga0466965_0377617_23_757 240
46 3300009551 Ga0105238_10531273 Ga0105238_105312732 241
47 3300005564 Ga0070664_100097624 Ga0070664_1000976242 243
48 3300005718 Ga0068866_10254744 Ga0068866_102547442 243
49 3300025942 Ga0207689_10676937 Ga0207689_106769371 243
50 3300025944 Ga0207661_10089838 Ga0207661_100898383 243
51 3300025945 Ga0207679_10277499 Ga0207679_102774992 243
52 3300048913 Ga0496110_0297493 Ga0496110_0297493_72_848 243
53 3300048906 Ga0496103_0127309 Ga0496103_0127309_22_759 245
54 3300031649 Ga0307514_10023731 Ga0307514_100237313 247
55 3300005458 Ga0070681_10153551 Ga0070681_101535512 248
56 3300005530 Ga0070679_100135700 Ga0070679_1001357003 248
57 3300044694 Ga0466963_0510224 Ga0466963_0510224_49_834 248
58 3300044706 Ga0466964_0256427 Ga0466964_0256427_35_784 248
59 3300053153 Ga0500616_0000079 Ga0500616_0000079_64286_65140 248
60 3300000531 CNBas_1004306 CNBas_10043061 249
61 3300000549 LJQas_1001379 LJQas_10013792 249
62 3300003373 JGI25407J50210_10000782 JGI25407J50210_100007826 249
63 3300003373 JGI25407J50210_10001131 JGI25407J50210_100011315 249
64 3300003373 JGI25407J50210_10002794 JGI25407J50210_100027945 249
65 3300003373 JGI25407J50210_10008339 JGI25407J50210_100083391 249
66 3300005327 Ga0070658_10123255 Ga0070658_101232552 249
67 3300005329 Ga0070683_100017901 Ga0070683_1000179012 249
68 3300005336 Ga0070680_100003289 Ga0070680_1000032899 249
69 3300005337 Ga0070682_100030753 Ga0070682_1000307532 249
70 3300005341 Ga0070691_10043076 Ga0070691_100430762 249
71 3300005344 Ga0070661_100224852 Ga0070661_1002248522 249
72 3300005345 Ga0070692_10088806 Ga0070692_100888062 249
73 3300005347 Ga0070668_100002340 Ga0070668_1000023406 249
74 3300005366 Ga0070659_100011836 Ga0070659_1000118365 249
75 3300005441 Ga0070700_100203538 Ga0070700_1002035382 249
76 3300005444 Ga0070694_100337527 Ga0070694_1003375272 249
77 3300005455 Ga0070663_100418156 Ga0070663_1004181561 249
78 3300005457 Ga0070662_100004478 Ga0070662_1000044785 249
79 3300005458 Ga0070681_10005510 Ga0070681_100055108 249
80 3300005458 Ga0070681_10129823 Ga0070681_101298232 249
81 3300005530 Ga0070679_100006422 Ga0070679_1000064229 249
82 3300005530 Ga0070679_100132047 Ga0070679_1001320473 249
83 3300005530 Ga0070679_100663400 Ga0070679_1006634002 249
84 3300005535 Ga0070684_100020309 Ga0070684_1000203092 249
85 3300005545 Ga0070695_100534088 Ga0070695_1005340881 249
86 3300005549 Ga0070704_100126369 Ga0070704_1001263692 249
87 3300005564 Ga0070664_100134840 Ga0070664_1001348402 249
88 3300005577 Ga0068857_100094986 Ga0068857_1000949862 249
89 3300005578 Ga0068854_100363453 Ga0068854_1003634532 249
90 3300005614 Ga0068856_100025491 Ga0068856_1000254913 249
91 3300005616 Ga0068852_100005572 Ga0068852_10000557210 249
92 3300005719 Ga0068861_100026935 Ga0068861_1000269355 249
93 3300005937 Ga0081455_10013129 Ga0081455_100131296 249
94 3300005937 Ga0081455_10058863 Ga0081455_100588632 249
95 3300005981 Ga0081538_10000067 Ga0081538_100000679 249
96 3300005981 Ga0081538_10000084 Ga0081538_1000008471 249
97 3300005981 Ga0081538_10000123 Ga0081538_1000012340 249
98 3300005981 Ga0081538_10000125 Ga0081538_1000012578 249
99 3300005981 Ga0081538_10003515 Ga0081538_1000351512 249
100 3300005981 Ga0081538_10010870 Ga0081538_100108706 249
101 3300005981 Ga0081538_10014097 Ga0081538_100140977 249
102 3300005981 Ga0081538_10018050 Ga0081538_100180502 249
103 3300005981 Ga0081538_10025408 Ga0081538_100254082 249
104 3300005981 Ga0081538_10033366 Ga0081538_100333664 249
105 3300005981 Ga0081538_10085402 Ga0081538_100854022 249
106 3300005981 Ga0081538_10197183 Ga0081538_101971831 249
107 3300005983 Ga0081540_1029508 Ga0081540_10295084 249
108 3300006038 Ga0075365_10003005 Ga0075365_100030053 249
109 3300006042 Ga0075368_10014651 Ga0075368_100146513 249
110 3300006048 Ga0075363_100033358 Ga0075363_1000333583 249
111 3300006178 Ga0075367_10004385 Ga0075367_100043856 249
112 3300006844 Ga0075428_100014027 Ga0075428_1000140279 249
113 3300006844 Ga0075428_100042812 Ga0075428_1000428123 249
114 3300006844 Ga0075428_100215873 Ga0075428_1002158732 249
115 3300006844 Ga0075428_100256956 Ga0075428_1002569562 249
116 3300006844 Ga0075428_100270361 Ga0075428_1002703612 249
117 3300006846 Ga0075430_100000877 Ga0075430_1000008772 249
118 3300006846 Ga0075430_100048550 Ga0075430_1000485501 249
119 3300006846 Ga0075430_100089292 Ga0075430_1000892923 249
120 3300006847 Ga0075431_100049697 Ga0075431_1000496973 249
121 3300006847 Ga0075431_100176277 Ga0075431_1001762772 249
122 3300006847 Ga0075431_100499381 Ga0075431_1004993812 249
123 3300006880 Ga0075429_100028965 Ga0075429_1000289653 249
124 3300009093 Ga0105240_10036107 Ga0105240_100361078 249
125 3300009094 Ga0111539_10140647 Ga0111539_101406474 249
126 3300009147 Ga0114129_10004853 Ga0114129_100048537 249
127 3300009147 Ga0114129_10189745 Ga0114129_101897452 249
128 3300009147 Ga0114129_10291713 Ga0114129_102917132 249
129 3300009545 Ga0105237_10058746 Ga0105237_100587464 249
130 3300009551 Ga0105238_10010932 Ga0105238_100109327 249
131 3300009553 Ga0105249_10001019 Ga0105249_100010197 249
132 3300013104 Ga0157370_10004857 Ga0157370_1000485717 249
133 3300013105 Ga0157369_10018671 Ga0157369_100186719 249
134 3300013306 Ga0163162_11122712 Ga0163162_111227121 249
135 3300013307 Ga0157372_10015654 Ga0157372_1001565410 249
136 3300020082 Ga0206353_10962585 Ga0206353_109625852 249
137 3300025909 Ga0207705_10103698 Ga0207705_101036982 249
138 3300025912 Ga0207707_10078290 Ga0207707_100782902 249
139 3300025913 Ga0207695_10063879 Ga0207695_100638795 249
140 3300025914 Ga0207671_10109425 Ga0207671_101094251 249
141 3300025917 Ga0207660_10002251 Ga0207660_1000225114 249
142 3300025917 Ga0207660_10430845 Ga0207660_104308451 249
143 3300025919 Ga0207657_10020029 Ga0207657_100200292 249
144 3300025921 Ga0207652_10004237 Ga0207652_100042375 249
145 3300025924 Ga0207694_10079423 Ga0207694_100794232 249
146 3300025932 Ga0207690_10024953 Ga0207690_100249532 249
147 3300025932 Ga0207690_10050886 Ga0207690_100508863 249
148 3300025933 Ga0207706_10001024 Ga0207706_1000102430 249
149 3300025944 Ga0207661_10001028 Ga0207661_1000102812 249
150 3300025945 Ga0207679_10102075 Ga0207679_101020752 249
151 3300025961 Ga0207712_10013843 Ga0207712_100138433 249
152 3300025972 Ga0207668_10037159 Ga0207668_100371594 249
153 3300025972 Ga0207668_10285329 Ga0207668_102853292 249
154 3300026023 Ga0207677_10297012 Ga0207677_102970122 249
155 3300026075 Ga0207708_10209062 Ga0207708_102090622 249
156 3300026118 Ga0207675_100003216 Ga0207675_10000321615 249
157 3300026142 Ga0207698_10063324 Ga0207698_100633242 249
158 3300027866 Ga0209813_10011683 Ga0209813_100116833 249
159 3300031548 Ga0307408_100270685 Ga0307408_1002706852 249
160 3300031548 Ga0307408_100272403 Ga0307408_1002724032 249
161 3300031731 Ga0307405_10016965 Ga0307405_100169653 249
162 3300031824 Ga0307413_10002860 Ga0307413_100028602 249
163 3300031824 Ga0307413_10063964 Ga0307413_100639642 249
164 3300031852 Ga0307410_10029722 Ga0307410_100297222 249
165 3300031852 Ga0307410_10038992 Ga0307410_100389922 249
166 3300031852 Ga0307410_10583782 Ga0307410_105837821 249
167 3300031901 Ga0307406_10005308 Ga0307406_100053086 249
168 3300031901 Ga0307406_10034162 Ga0307406_100341624 249
169 3300031903 Ga0307407_10009325 Ga0307407_100093252 249
170 3300031903 Ga0307407_10405202 Ga0307407_104052021 249
171 3300031911 Ga0307412_10097751 Ga0307412_100977512 249
172 3300031911 Ga0307412_10690870 Ga0307412_106908701 249
173 3300031995 Ga0307409_100005435 Ga0307409_1000054358 249
174 3300031995 Ga0307409_100008161 Ga0307409_1000081616 249
175 3300031995 Ga0307409_100011273 Ga0307409_1000112734 249
176 3300031995 Ga0307409_100438058 Ga0307409_1004380582 249
177 3300032002 Ga0307416_100152205 Ga0307416_1001522052 249
178 3300032002 Ga0307416_100193908 Ga0307416_1001939082 249
179 3300032002 Ga0307416_100309545 Ga0307416_1003095452 249
180 3300032002 Ga0307416_100407471 Ga0307416_1004074712 249
181 3300032004 Ga0307414_10046732 Ga0307414_100467322 249
182 3300032126 Ga0307415_100041051 Ga0307415_1000410512 249
183 3300032126 Ga0307415_100045633 Ga0307415_1000456333 249
184 3300032126 Ga0307415_100357826 Ga0307415_1003578262 249
185 3300037466 Ga0395898_0018658 Ga0395898_0018658_2445_3194 249
186 3300037471 Ga0395905_0225789 Ga0395905_0225789_30_812 249
187 3300037471 Ga0395905_0368423 Ga0395905_0368423_82_831 249
188 3300038443 Ga0395901_0036777 Ga0395901_0036777_4130_4879 249
189 3300038443 Ga0395901_0286634 Ga0395901_0286634_310_1077 249
190 3300045976 Ga0466967_0039021 Ga0466967_0039021_2688_3440 249
191 3300045976 Ga0466967_0281106 Ga0466967_0281106_519_1277 249
192 3300046491 Ga0495584_0110462 Ga0495584_0110462_148_897 249
193 3300046500 Ga0495596_0107192 Ga0495596_0107192_166_918 249
194 3300046515 Ga0495620_0101284 Ga0495620_0101284_123_875 249
195 3300046615 Ga0495656_0029526 Ga0495656_0029526_475_1227 249
196 3300046794 Ga0495589_0161808 Ga0495589_0161808_206_958 249
197 3300048912 Ga0496109_0622523 Ga0496109_0622523_31_783 249
198 3300048915 Ga0496112_0602025 Ga0496112_0602025_130_882 249
199 3300049568 Ga0501031_0078936 Ga0501031_0078936_940_1689 249
200 3300049568 Ga0501031_0131935 Ga0501031_0131935_666_1418 249
201 3300049572 Ga0501036_0205875 Ga0501036_0205875_365_1117 249
202 3300049573 Ga0501037_0255045 Ga0501037_0255045_66_815 249
203 3300049573 Ga0501037_0325847 Ga0501037_0325847_129_878 249
204 3300049575 Ga0501039_0093351 Ga0501039_0093351_1467_2219 249
205 3300049576 Ga0501040_0029662 Ga0501040_0029662_366_1118 249
206 3300049578 Ga0501042_0021954 Ga0501042_0021954_654_1406 249
207 3300049580 Ga0501046_0139174 Ga0501046_0139174_875_1627 249
208 3300049582 Ga0501048_0209987 Ga0501048_0209987_106_858 249
209 3300049582 Ga0501048_0221107 Ga0501048_0221107_256_1005 249
210 3300049583 Ga0501067_0085450 Ga0501067_0085450_738_1490 249
211 3300049587 Ga0501071_0516377 Ga0501071_0516377_58_810 249
212 3300049591 Ga0501075_0025470 Ga0501075_0025470_2024_2776 249
213 3300049592 Ga0501076_0016329 Ga0501076_0016329_2219_2971 249
214 3300049593 Ga0501077_0146869 Ga0501077_0146869_474_1223 249
215 3300049741 Ga0501079_0028951 Ga0501079_0028951_2902_3651 249
216 3300049741 Ga0501079_0042190 Ga0501079_0042190_2762_3514 249
217 3300049743 Ga0501081_0023548 Ga0501081_0023548_963_1715 249
218 3300049743 Ga0501081_0093487 Ga0501081_0093487_997_1746 249
219 3300049822 Ga0501035_0202236 Ga0501035_0202236_439_1191 249
220 3300049822 Ga0501035_0415205 Ga0501035_0415205_130_948 249
221 3300049824 Ga0501045_0178498 Ga0501045_0178498_646_1395 249
222 3300050490 nmdc:mga03n38_70717_c1 nmdc:mga03n38_70717_c1_198_959 249
223 3300050491 nmdc:mga00v17_29652_c1 nmdc:mga00v17_29652_c1_2109_2873 249
224 3300050492 nmdc:mga0yw44_24846_c1 nmdc:mga0yw44_24846_c1_1436_2200 249
225 3300050494 nmdc:mga06z11_222504_c1 nmdc:mga06z11_222504_c1_111_863 249
226 3300050494 nmdc:mga06z11_40893_c1 nmdc:mga06z11_40893_c1_1070_1834 249
227 3300050495 nmdc:mga04h51_10245_c1 nmdc:mga04h51_10245_c1_503_1267 249
228 3300050507 nmdc:mga05p37_136562_c1 nmdc:mga05p37_136562_c1_640_1389 249
229 3300050507 nmdc:mga05p37_197845_c1 nmdc:mga05p37_197845_c1_298_1050 249
230 3300050507 nmdc:mga05p37_263622_c1 nmdc:mga05p37_263622_c1_432_1184 249
231 3300050507 nmdc:mga05p37_3676_c1 nmdc:mga05p37_3676_c1_2920_3669 249
232 3300050507 nmdc:mga05p37_855431_c1 nmdc:mga05p37_855431_c1_67_819 249
233 3300050508 nmdc:mga09592_236524_c1 nmdc:mga09592_236524_c1_748_1500 249
234 3300050508 nmdc:mga09592_69131_c1 nmdc:mga09592_69131_c1_1051_1800 249
235 3300050509 nmdc:mga0qj67_40326_c1 nmdc:mga0qj67_40326_c1_1228_1977 249
236 3300050509 nmdc:mga0qj67_646_c1 nmdc:mga0qj67_646_c1_23042_23791 249
237 3300050510 nmdc:mga06r32_37683_c1 nmdc:mga06r32_37683_c1_1792_2541 249
238 3300050510 nmdc:mga06r32_63885_c1 nmdc:mga06r32_63885_c1_2754_3506 249
239 3300050511 nmdc:mga08y16_245547_c1 nmdc:mga08y16_245547_c1_80_829 249
240 3300050515 nmdc:mga0a205_330484_c1 nmdc:mga0a205_330484_c1_503_1255 249
241 3300053104 Ga0500556_0000008 Ga0500556_0000008_143231_144022 249
242 3300053139 Ga0500568_0000003 Ga0500568_0000003_164629_165420 249
243 3300054114 Ga0501084_0174744 Ga0501084_0174744_907_1656 249
244 3300054114 Ga0501084_0569848 Ga0501084_0569848_89_880 249
245 3300060353 Ga0501082_0023026 Ga0501082_0023026_2879_3631 249
246 3300061734 Ga0530510_0056248 Ga0530510_0056248_1517_2266 249
247 3300061734 Ga0530510_0576377 Ga0530510_0576377_44_796 249
248 iso_pu_bacteria 2585428157 2588107903 249

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

85

270

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.884 43 238
3dhw-assembly2.cif.gz_E crystal structure of methionine importer metni 0.8499 47 228
3dhw-assembly1.cif.gz_B crystal structure of methionine importer metni 0.8167 47 231
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.8087 45 233
7ahh-assembly1.cif.gz_B opua inhibited inward-facing, sbd docked 0.8075 12 233
ID Description Score Start End Superfamily
af_P75851_53_247_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.942 47 237 1.10.3720.10
af_Q2FVG9_10_202_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9414 47 237 1.10.3720.10
af_Q57856_64_258_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9384 50 236 1.10.3720.10
af_P14176_140_330_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9373 49 237 1.10.3720.10
af_Q47539_71_268_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9347 55 237 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A2E3AYT2-F1-model_v4 Nitrate ABC transporter permease 0.9907 31 239 GO:0005886
GO:0055085
AF-A0A7W0A835-F1-model_v4 ABC transporter permease 0.9892 13 247 GO:0005886
GO:0055085
AF-A0A4Q2U6H9-F1-model_v4 ABC transporter permease 0.9827 6 242 GO:0005886
GO:0055085
AF-A0A444KBC3-F1-model_v4 ABC transporter permease 0.9819 33 242 GO:0005886
GO:0055085
AF-A0A1N7J0R8-F1-model_v4 Putative hydroxymethylpyrimidine transport system permease protein 0.9814 11 237 GO:0005886
GO:0055085

Feature Viewer

pLDDT pTM Quality
90.76 0.85 High
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Predicted Structure (AlphaFold2)

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