F359983

General Info

Members Datasets Scaffolds Average Seq Length
248 178 244 463

Family's Representative Sequence

Representative Sequence 3300031251|Ga0265327_10015279|Ga0265327_100152793
Length 449
Sequence MHLDPVILSRIQFAWVVAWHILLPAFTIGLACYIATLEGLHLWTKRAVYLRLSTFWLRIFAISFGMGVVSGIIMPFQFGTNWSRLSDAMANVTGPLLAYEGLTAFFLEAAFLGVLLFGRKLVPPAVHFVAAVLVAAGTMFSSFWILATNSWMQTPSGYEIGPDGRFFPKDWIEVIFSPSFPYRLGHTVSAFMVTTAFVVLAVGAYTLRRGRSIAEGRVMVHMAVWFLAVMVPVQMVLGDLHGINTREHQPAKLAAIEGLWDTGRGVPASIVGWPDETAERNDYEIAIPKLGSLYLTHDWEGEVKGLKDFPRDERPPVPIVYFSFRAMVGIAVLMLCFVVAGVVLALRGRLTNADVYLAACQWTAPLGFLAVLAGWTTTEVGRQPWTIYGMLRTADSVSPVLGGGDVLVSLLGYIVVYLIMFPTGIWFMVRLVQAGPVEAERTQPRLGGD

Samples

Sample ID Description Type Environment
1 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
2 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
3 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
62 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
63 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
92 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
93 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
97 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
98 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
99 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
100 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
103 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
104 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
106 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
107 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
111 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
112 3300044659 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2E Metagenome Unclassified
113 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
114 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
115 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
116 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
117 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
118 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
119 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
120 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
121 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
122 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
123 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
124 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
125 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
126 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
127 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
128 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
129 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
130 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
131 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
132 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
133 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
134 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
137 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
138 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
139 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
140 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
141 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
142 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
143 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
144 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
145 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
146 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
147 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
148 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
152 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
163 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
169 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
170 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
171 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
172 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
173 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
174 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
175 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
176 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.39
Metatranscriptomes 0
Isolates 1.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.03
Nodule 2.82
Rhizoplane 10.08
Rhizosphere 81.05
Stem 0
Stem Tuber 0
Unclassified 2.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000017 3300003214 Bacteria 377013
2 JGI25404J52841_10007458 3300003659 Bacteria 2313
3 Ga0070658_10013264 3300005327 Bacteria 6611
4 Ga0070683_100050355 3300005329 Bacteria 3856
5 Ga0070690_100029121 3300005330 Bacteria 3422
6 Ga0068869_100001355 3300005334 Bacteria 14514
7 Ga0070666_10044701 3300005335 Bacteria 2968
8 Ga0070689_100014380 3300005340 Bacteria 5747
9 Ga0070673_100124798 3300005364 Bacteria 2153
10 Ga0070688_100043534 3300005365 Bacteria 2766
11 Ga0070659_100026804 3300005366 Bacteria 4436
12 Ga0070667_100000339 3300005367 Bacteria 52285
13 Ga0070667_100142954 3300005367 Bacteria 2097
14 Ga0070711_100021608 3300005439 Bacteria 4163
15 Ga0070678_100035442 3300005456 Bacteria 3484
16 Ga0070662_100044969 3300005457 Bacteria 3166
17 Ga0070706_100004188 3300005467 Bacteria 14006
18 Ga0070698_100086740 3300005471 Bacteria 3116
19 Ga0070679_100132031 3300005530 Bacteria 2478
20 Ga0070684_100033472 3300005535 Bacteria 4388
21 Ga0070697_100002668 3300005536 Bacteria 13724
22 Ga0068853_100154585 3300005539 Bacteria 2066
23 Ga0070665_100010861 3300005548 Bacteria 9211
24 Ga0070665_100050027 3300005548 Bacteria 4193
25 Ga0070665_100126624 3300005548 Bacteria 2557
26 Ga0068855_100066867 3300005563 Bacteria 4189
27 Ga0068855_100118953 3300005563 Bacteria 3025
28 Ga0068857_100028414 3300005577 Bacteria 4936
29 Ga0068856_100041079 3300005614 Bacteria 4544
30 Ga0068864_100014042 3300005618 Bacteria 6642
31 Ga0068866_10046948 3300005718 Bacteria 2174
32 Ga0068863_100002826 3300005841 Bacteria 17191
33 Ga0068863_100152737 3300005841 Bacteria 2210
34 Ga0068858_100027106 3300005842 Bacteria 5323
35 Ga0068858_100044904 3300005842 Bacteria 4095
36 Ga0068860_100000442 3300005843 Bacteria 52295
37 Ga0081538_10008112 3300005981 Bacteria 8963
38 Ga0081540_1000094 3300005983 Bacteria 93201
39 Ga0081540_1000266 3300005983 Bacteria 54692
40 Ga0081540_1003123 3300005983 Bacteria 13246
41 Ga0070712_100032239 3300006175 Bacteria 3536
42 Ga0097621_100005204 3300006237 Bacteria 9141
43 Ga0097621_100037431 3300006237 Bacteria 3887
44 Ga0097621_100080044 3300006237 Bacteria 2717
45 Ga0097621_100108488 3300006237 Bacteria 2344
46 Ga0097621_100120286 3300006237 Bacteria 2226
47 Ga0075370_10032173 3300006353 Bacteria 2931
48 Ga0068871_100000859 3300006358 Bacteria 20256
49 Ga0068871_100061925 3300006358 Bacteria 3057
50 Ga0075434_100010472 3300006871 Bacteria 8693
51 Ga0075434_100119536 3300006871 Bacteria 2649
52 Ga0068865_100017216 3300006881 Bacteria 4644
53 Ga0099823_1000406 3300006944 Bacteria 27786
54 Ga0075435_100019013 3300007076 Bacteria 5236
55 Ga0105240_10024840 3300009093 Bacteria 7889
56 Ga0105240_10199528 3300009093 Bacteria 2346
57 Ga0105243_10000738 3300009148 Bacteria 31269
58 Ga0105243_10060183 3300009148 Bacteria 3033
59 Ga0105241_10061025 3300009174 Bacteria 2902
60 Ga0105242_10007844 3300009176 Bacteria 8214
61 Ga0105242_10045897 3300009176 Bacteria 3542
62 Ga0105248_10352377 3300009177 Bacteria 1657
63 Ga0105237_10093582 3300009545 Bacteria 2994
64 Ga0105237_10115560 3300009545 Bacteria 2677
65 Ga0105238_10015566 3300009551 Bacteria 7701
66 Ga0105238_10194021 3300009551 Bacteria 2007
67 Ga0105238_10243322 3300009551 Bacteria 1777
68 Ga0105239_10132564 3300010375 Bacteria 2773
69 Ga0157369_10032505 3300013105 Bacteria 5737
70 Ga0157378_10030890 3300013297 Bacteria 4730
71 Ga0157378_10094637 3300013297 Bacteria 2720
72 Ga0157378_10120035 3300013297 Bacteria 2422
73 Ga0157378_10232869 3300013297 Bacteria 1756
74 Ga0163162_10178146 3300013306 Bacteria 2252
75 Ga0157372_10375622 3300013307 Bacteria 1656
76 Ga0157372_10454171 3300013307 Bacteria 1493
77 Ga0157375_10115455 3300013308 Bacteria 2787
78 Ga0157375_10173466 3300013308 Bacteria 2305
79 Ga0157375_10242001 3300013308 Bacteria 1964
80 Ga0163163_10000004 3300014325 Bacteria 416569
81 Ga0163163_10081729 3300014325 Bacteria 3233
82 Ga0157379_10003791 3300014968 Bacteria 12875
83 Ga0157379_10063625 3300014968 Bacteria 3297
84 Ga0157376_10056707 3300014969 Bacteria 3274
85 Ga0163161_10118236 3300017792 Bacteria 1989
86 Ga0207427_103046 3300025231 Bacteria 3824
87 Ga0209233_1000006 3300025261 Bacteria 1473685
88 Ga0207688_10005002 3300025901 Bacteria 7208
89 Ga0207647_10050760 3300025904 Bacteria 2567
90 Ga0207705_10093039 3300025909 Bacteria 2210
91 Ga0207684_10000713 3300025910 Bacteria 39081
92 Ga0207654_10031570 3300025911 Bacteria 2919
93 Ga0207695_10098542 3300025913 Bacteria 2922
94 Ga0207695_10131785 3300025913 Bacteria 2457
95 Ga0207695_10132140 3300025913 Bacteria 2453
96 Ga0207693_10022866 3300025915 Bacteria 4964
97 Ga0207660_10059457 3300025917 Bacteria 2744
98 Ga0207657_10011167 3300025919 Bacteria 8929
99 Ga0207694_10038551 3300025924 Bacteria 3674
100 Ga0207694_10071554 3300025924 Bacteria 2710
101 Ga0207687_10016935 3300025927 Bacteria 4790
102 Ga0207687_10105650 3300025927 Bacteria 2080
103 Ga0207706_10028365 3300025933 Bacteria 4999
104 Ga0207706_10101206 3300025933 Bacteria 2535
105 Ga0207704_10012416 3300025938 Bacteria 4229
106 Ga0207689_10009204 3300025942 Bacteria 8543
107 Ga0207689_10121370 3300025942 Bacteria 2150
108 Ga0207661_10004708 3300025944 Bacteria 9556
109 Ga0207667_10032680 3300025949 Bacteria 5603
110 Ga0207712_10072430 3300025961 Bacteria 2481
111 Ga0207658_10000492 3300025986 Bacteria 36290
112 Ga0207658_10145434 3300025986 Bacteria 1924
113 Ga0207703_10007409 3300026035 Bacteria 8719
114 Ga0207703_10042453 3300026035 Bacteria 3648
115 Ga0207639_10112724 3300026041 Bacteria 2220
116 Ga0207678_10042153 3300026067 Bacteria 3956
117 Ga0207708_10034277 3300026075 Bacteria 3861
118 Ga0207702_10036589 3300026078 Bacteria 4107
119 Ga0207641_10012659 3300026088 Bacteria 6916
120 Ga0207648_10002031 3300026089 Bacteria 22111
121 Ga0207648_10077184 3300026089 Bacteria 2903
122 Ga0207674_10020140 3300026116 Bacteria 7215
123 Ga0207674_10067393 3300026116 Bacteria 3603
124 Ga0207674_10228964 3300026116 Bacteria 1806
125 Ga0207675_100026988 3300026118 Bacteria 5346
126 Ga0207683_10013614 3300026121 Bacteria 6938
127 Ga0207683_10116989 3300026121 Bacteria 2390
128 Ga0209389_1000111 3300027296 Bacteria 72517
129 Ga0209489_100220 3300027361 Bacteria 95167
130 Ga0209700_100041 3300027363 Bacteria 168380
131 Ga0268266_10055513 3300028379 Bacteria 3405
132 Ga0268266_10226469 3300028379 Bacteria 1720
133 Ga0268264_10000491 3300028381 Bacteria 52312
134 Ga0265339_10077811 3300031249 Bacteria 1757
135 Ga0265327_10015279 3300031251 Bacteria 4966
136 Ga0307412_10015701 3300031911 Bacteria 4495
137 Ga0373945_0041243 3300035116 Bacteria 1668
138 Ga0373943_0061732 3300035170 Bacteria 1874
139 Ga0373931_0001187 3300035691 Bacteria 11129
140 Ga0373931_0023962 3300035691 Bacteria 3086
141 Ga0373927_0030013 3300035695 Bacteria 3547
142 Ga0373947_0026876 3300035725 Bacteria 3366
143 Ga0373925_0015126 3300037068 Bacteria 5578
144 Ga0395899_0111861 3300037312 Bacteria 1962
145 Ga0395900_0001990 3300037418 Bacteria 23071
146 Ga0395900_0031201 3300037418 Bacteria 5474
147 Ga0395900_0083142 3300037418 Bacteria 3289
148 Ga0395898_0065671 3300037466 Bacteria 3517
149 Ga0395905_0125180 3300037471 Bacteria 2417
150 Ga0395901_0042481 3300038443 Bacteria 4713
151 Ga0395901_0085910 3300038443 Bacteria 3289
152 Ga0436363_0754448 3300039450 Bacteria 7693
153 Ga0466969_0000166 3300044656 Bacteria 35546
154 Ga0466973_0018518 3300044659 Bacteria 6636
155 Ga0466965_0000963 3300044683 Bacteria 11123
156 Ga0466966_0031184 3300044684 Bacteria 3458
157 Ga0466963_0041015 3300044694 Bacteria 3034
158 Ga0466971_0007708 3300044719 Bacteria 4694
159 Ga0466958_0002040 3300045836 Bacteria 9974
160 Ga0495592_0083724 3300046454 Bacteria 2303
161 Ga0495651_0004591 3300046462 Bacteria 10557
162 Ga0495653_0130560 3300046463 Bacteria 1779
163 Ga0495639_0048789 3300046475 Bacteria 1921
164 Ga0495662_0041882 3300046476 Bacteria 2210
165 Ga0495664_0024382 3300046477 Bacteria 3515
166 Ga0495618_0034423 3300046514 Bacteria 3176
167 Ga0495630_0146868 3300046517 Bacteria 1793
168 Ga0495652_0094020 3300046529 Bacteria 2446
169 Ga0495640_0109670 3300046533 Bacteria 1804
170 Ga0495587_0002505 3300046536 Bacteria 12263
171 Ga0495587_0086757 3300046536 Bacteria 1811
172 Ga0495597_0057196 3300046542 Bacteria 1707
173 Ga0495645_0019549 3300046543 Bacteria 4876
174 Ga0495622_0001077 3300046557 Bacteria 14285
175 Ga0495668_0049534 3300046616 Bacteria 2330
176 Ga0495635_0013607 3300046663 Bacteria 5693
177 Ga0495623_0019077 3300046679 Bacteria 4429
178 Ga0495674_0221319 3300047319 Bacteria 1564
179 Ga0495675_0023212 3300047444 Bacteria 3953
180 Ga0495675_0099145 3300047444 Bacteria 1825
181 Ga0495684_0027502 3300047471 Bacteria 4366
182 Ga0495602_0032321 3300048088 Bacteria 4928
183 Ga0496101_0002082 3300048904 Bacteria 12194
184 Ga0496101_0029387 3300048904 Bacteria 3844
185 Ga0496102_0005151 3300048905 Bacteria 11088
186 Ga0496102_0021472 3300048905 Bacteria 5709
187 Ga0496103_0004581 3300048906 Bacteria 8372
188 Ga0496103_0024633 3300048906 Bacteria 3633
189 Ga0496104_0007444 3300048907 Bacteria 9673
190 Ga0496104_0069097 3300048907 Bacteria 3357
191 Ga0496105_0119348 3300048908 Bacteria 2175
192 Ga0496106_0002187 3300048909 Bacteria 14605
193 Ga0496107_0038733 3300048910 Bacteria 3418
194 Ga0496107_0079074 3300048910 Bacteria 2397
195 Ga0496107_0086170 3300048910 Bacteria 2292
196 Ga0496108_0008748 3300048911 Bacteria 8209
197 Ga0496108_0073839 3300048911 Bacteria 2879
198 Ga0496109_0003384 3300048912 Bacteria 13348
199 Ga0496109_0011802 3300048912 Bacteria 7520
200 Ga0496110_0000782 3300048913 Bacteria 22174
201 Ga0496110_0010104 3300048913 Bacteria 7662
202 Ga0496112_0053930 3300048915 Bacteria 3950
203 Ga0496113_0008132 3300048916 Bacteria 6810
204 Ga0496113_0011301 3300048916 Bacteria 5948
205 Ga0496114_0003597 3300048917 Bacteria 11911
206 Ga0496114_0077777 3300048917 Bacteria 2798
207 Ga0496115_0001995 3300048918 Bacteria 14586
208 Ga0496121_0000323 3300048924 Bacteria 100188
209 Ga0496121_0000673 3300048924 Bacteria 63703
210 Ga0501033_0007735 3300049570 Bacteria 8336
211 Ga0501033_0008631 3300049570 Bacteria 7886
212 Ga0501038_0000738 3300049574 Bacteria 29191
213 Ga0501043_0026046 3300049579 Bacteria 4589
214 Ga0501043_0032055 3300049579 Bacteria 4130
215 Ga0501046_0020477 3300049580 Bacteria 5468
216 Ga0501047_0004164 3300049581 Bacteria 13612
217 Ga0501069_0012984 3300049585 Bacteria 4437
218 Ga0501070_0002459 3300049586 Bacteria 16218
219 Ga0501073_0006407 3300049589 Bacteria 8762
220 Ga0501074_0020782 3300049590 Bacteria 4768
221 Ga0501080_0010098 3300049742 Bacteria 8633
222 Ga0501035_0006038 3300049822 Bacteria 11403
223 Ga0501035_0041296 3300049822 Bacteria 4165
224 Ga0501035_0051583 3300049822 Bacteria 3683
225 Ga0501044_0010412 3300049823 Bacteria 10090
226 Ga0501044_0014598 3300049823 Bacteria 8471
227 Ga0501044_0021157 3300049823 Bacteria 6945
228 Ga0501044_0048420 3300049823 Bacteria 4391
229 nmdc:mga07m45_4319_c1 3300050496 Bacteria 6954
230 nmdc:mga0n895_116375_c1 3300050512 Bacteria 2692
231 nmdc:mga0n895_169615_c1 3300050512 Bacteria 2214
232 nmdc:mga0n895_29416_c1 3300050512 Bacteria 5240
233 nmdc:mga0n895_63083_c1 3300050512 Bacteria 3664
234 nmdc:mga0rr50_11712_c1 3300050513 Bacteria 5629
235 nmdc:mga0rr50_27510_c1 3300050513 Bacteria 3983
236 nmdc:mga0a205_15059_c1 3300050515 Bacteria 7220
237 Ga0495612_0025888 3300053078 Bacteria 2356
238 Ga0495619_0017892 3300053085 Bacteria 4492
239 Ga0500643_007447 3300053087 Bacteria 4412
240 Ga0500595_001103 3300053119 Bacteria 14971
241 Ga0500573_0000060 3300053140 Bacteria 68257
242 Ga0500622_0002178 3300053156 Bacteria 14505
243 Ga0500639_027588 3300053163 Bacteria 3001
244 Ga0501082_0134085 3300060353 Bacteria 2149

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039450 Ga0436363_0754448 Ga0436363_0754448_2569_3960 418
2 3300005471 Ga0070698_100086740 Ga0070698_1000867402 421
3 3300003659 JGI25404J52841_10007458 JGI25404J52841_100074582 424
4 3300005983 Ga0081540_1000094 Ga0081540_100009410 424
5 3300044659 Ga0466973_0018518 Ga0466973_0018518_19_1425 425
6 3300031251 Ga0265327_10015279 Ga0265327_100152793 429
7 3300037312 Ga0395899_0111861 Ga0395899_0111861_209_1612 430
8 3300037418 Ga0395900_0083142 Ga0395900_0083142_1609_3012 430
9 3300037466 Ga0395898_0065671 Ga0395898_0065671_686_2089 430
10 3300038443 Ga0395901_0085910 Ga0395901_0085910_1609_3012 430
11 3300005983 Ga0081540_1003123 Ga0081540_10031231 434
12 3300010375 Ga0105239_10132564 Ga0105239_101325642 434
13 3300053163 Ga0500639_027588 Ga0500639_027588_793_2175 434
14 3300005842 Ga0068858_100027106 Ga0068858_1000271065 435
15 3300026035 Ga0207703_10007409 Ga0207703_100074095 435
16 3300048924 Ga0496121_0000323 Ga0496121_0000323_32764_34146 435
17 iso_pu_bacteria 8057575449 8057582586 435
18 3300005530 Ga0070679_100132031 Ga0070679_1001320312 436
19 iso_pu_bacteria 2513237104 2513722191 436
20 iso_pu_bacteria 2513237141 2513893747 436
21 iso_pu_bacteria 2881665667 2881667113 436
22 3300006353 Ga0075370_10032173 Ga0075370_100321732 437
23 3300050496 nmdc:mga07m45_4319_c1 nmdc:mga07m45_4319_c1_1624_3009 437
24 3300005548 Ga0070665_100050027 Ga0070665_1000500273 438
25 3300006237 Ga0097621_100005204 Ga0097621_1000052044 438
26 3300006358 Ga0068871_100000859 Ga0068871_10000085915 438
27 3300009545 Ga0105237_10093582 Ga0105237_100935822 438
28 3300009551 Ga0105238_10243322 Ga0105238_102433222 438
29 3300025919 Ga0207657_10011167 Ga0207657_100111676 438
30 3300044656 Ga0466969_0000166 Ga0466969_0000166_12786_14231 438
31 3300044683 Ga0466965_0000963 Ga0466965_0000963_2051_3496 438
32 3300044684 Ga0466966_0031184 Ga0466966_0031184_1592_3037 438
33 3300044694 Ga0466963_0041015 Ga0466963_0041015_297_1742 438
34 3300044719 Ga0466971_0007708 Ga0466971_0007708_862_2307 438
35 3300045836 Ga0466958_0002040 Ga0466958_0002040_6606_8051 438
36 3300047444 Ga0495675_0099145 Ga0495675_0099145_420_1796 438
37 3300049822 Ga0501035_0051583 Ga0501035_0051583_1074_2456 438
38 3300005327 Ga0070658_10013264 Ga0070658_100132642 439
39 3300005329 Ga0070683_100050355 Ga0070683_1000503552 439
40 3300005366 Ga0070659_100026804 Ga0070659_1000268042 439
41 3300005367 Ga0070667_100142954 Ga0070667_1001429542 439
42 3300005535 Ga0070684_100033472 Ga0070684_1000334723 439
43 3300005539 Ga0068853_100154585 Ga0068853_1001545852 439
44 3300005563 Ga0068855_100066867 Ga0068855_1000668672 439
45 3300005563 Ga0068855_100118953 Ga0068855_1001189532 439
46 3300005577 Ga0068857_100028414 Ga0068857_1000284141 439
47 3300006237 Ga0097621_100108488 Ga0097621_1001084882 439
48 3300009093 Ga0105240_10024840 Ga0105240_100248406 439
49 3300009093 Ga0105240_10199528 Ga0105240_101995282 439
50 3300009174 Ga0105241_10061025 Ga0105241_100610252 439
51 3300009545 Ga0105237_10115560 Ga0105237_101155602 439
52 3300009551 Ga0105238_10015566 Ga0105238_100155662 439
53 3300013105 Ga0157369_10032505 Ga0157369_100325054 439
54 3300013307 Ga0157372_10375622 Ga0157372_103756221 439
55 3300013307 Ga0157372_10454171 Ga0157372_104541711 439
56 3300025909 Ga0207705_10093039 Ga0207705_100930392 439
57 3300025911 Ga0207654_10031570 Ga0207654_100315702 439
58 3300025913 Ga0207695_10098542 Ga0207695_100985422 439
59 3300025913 Ga0207695_10131785 Ga0207695_101317852 439
60 3300025913 Ga0207695_10132140 Ga0207695_101321402 439
61 3300025917 Ga0207660_10059457 Ga0207660_100594571 439
62 3300025924 Ga0207694_10038551 Ga0207694_100385513 439
63 3300025924 Ga0207694_10071554 Ga0207694_100715542 439
64 3300025944 Ga0207661_10004708 Ga0207661_100047085 439
65 3300025949 Ga0207667_10032680 Ga0207667_100326803 439
66 3300025986 Ga0207658_10145434 Ga0207658_101454342 439
67 3300026041 Ga0207639_10112724 Ga0207639_101127242 439
68 3300026067 Ga0207678_10042153 Ga0207678_100421531 439
69 3300026116 Ga0207674_10067393 Ga0207674_100673932 439
70 3300028379 Ga0268266_10226469 Ga0268266_102264691 439
71 3300031249 Ga0265339_10077811 Ga0265339_100778111 439
72 3300037418 Ga0395900_0031201 Ga0395900_0031201_2867_4249 439
73 3300038443 Ga0395901_0042481 Ga0395901_0042481_2200_3594 439
74 3300046454 Ga0495592_0083724 Ga0495592_0083724_23_1414 439
75 3300046462 Ga0495651_0004591 Ga0495651_0004591_1839_3230 439
76 3300046529 Ga0495652_0094020 Ga0495652_0094020_367_1758 439
77 3300046536 Ga0495587_0002505 Ga0495587_0002505_5656_7047 439
78 3300046536 Ga0495587_0086757 Ga0495587_0086757_220_1602 439
79 3300046616 Ga0495668_0049534 Ga0495668_0049534_61_1458 439
80 3300046679 Ga0495623_0019077 Ga0495623_0019077_1421_2812 439
81 3300047444 Ga0495675_0023212 Ga0495675_0023212_2417_3808 439
82 3300048088 Ga0495602_0032321 Ga0495602_0032321_2188_3579 439
83 3300048924 Ga0496121_0000673 Ga0496121_0000673_17660_19042 439
84 3300049570 Ga0501033_0007735 Ga0501033_0007735_3840_5231 439
85 3300049574 Ga0501038_0000738 Ga0501038_0000738_14514_15905 439
86 3300049579 Ga0501043_0026046 Ga0501043_0026046_2102_3499 439
87 3300049579 Ga0501043_0032055 Ga0501043_0032055_2226_3617 439
88 3300049580 Ga0501046_0020477 Ga0501046_0020477_2979_4370 439
89 3300049581 Ga0501047_0004164 Ga0501047_0004164_2006_3397 439
90 3300049585 Ga0501069_0012984 Ga0501069_0012984_2909_4300 439
91 3300049586 Ga0501070_0002459 Ga0501070_0002459_3151_4542 439
92 3300049589 Ga0501073_0006407 Ga0501073_0006407_2280_3671 439
93 3300049590 Ga0501074_0020782 Ga0501074_0020782_915_2306 439
94 3300049742 Ga0501080_0010098 Ga0501080_0010098_5095_6486 439
95 3300049822 Ga0501035_0041296 Ga0501035_0041296_871_2268 439
96 3300049823 Ga0501044_0014598 Ga0501044_0014598_6540_7931 439
97 3300050512 nmdc:mga0n895_169615_c1 nmdc:mga0n895_169615_c1_284_1687 439
98 3300053087 Ga0500643_007447 Ga0500643_007447_1538_2935 439
99 3300053156 Ga0500622_0002178 Ga0500622_0002178_11016_12413 439
100 3300060353 Ga0501082_0134085 Ga0501082_0134085_239_1630 439
101 3300003214 JGI25165J46597_1000017 JGI25165J46597_100001721 440
102 3300005330 Ga0070690_100029121 Ga0070690_1000291212 440
103 3300005334 Ga0068869_100001355 Ga0068869_10000135516 440
104 3300005335 Ga0070666_10044701 Ga0070666_100447012 440
105 3300005340 Ga0070689_100014380 Ga0070689_1000143802 440
106 3300005364 Ga0070673_100124798 Ga0070673_1001247981 440
107 3300005365 Ga0070688_100043534 Ga0070688_1000435342 440
108 3300005367 Ga0070667_100000339 Ga0070667_10000033921 440
109 3300005439 Ga0070711_100021608 Ga0070711_1000216083 440
110 3300005456 Ga0070678_100035442 Ga0070678_1000354423 440
111 3300005457 Ga0070662_100044969 Ga0070662_1000449692 440
112 3300005467 Ga0070706_100004188 Ga0070706_1000041888 440
113 3300005536 Ga0070697_100002668 Ga0070697_1000026689 440
114 3300005548 Ga0070665_100010861 Ga0070665_1000108613 440
115 3300005548 Ga0070665_100126624 Ga0070665_1001266242 440
116 3300005614 Ga0068856_100041079 Ga0068856_1000410792 440
117 3300005618 Ga0068864_100014042 Ga0068864_1000140422 440
118 3300005718 Ga0068866_10046948 Ga0068866_100469482 440
119 3300005841 Ga0068863_100002826 Ga0068863_10000282614 440
120 3300005841 Ga0068863_100152737 Ga0068863_1001527372 440
121 3300005842 Ga0068858_100044904 Ga0068858_1000449042 440
122 3300005843 Ga0068860_100000442 Ga0068860_10000044221 440
123 3300005981 Ga0081538_10008112 Ga0081538_100081126 440
124 3300005983 Ga0081540_1000266 Ga0081540_100026641 440
125 3300006175 Ga0070712_100032239 Ga0070712_1000322393 440
126 3300006237 Ga0097621_100037431 Ga0097621_1000374314 440
127 3300006237 Ga0097621_100080044 Ga0097621_1000800442 440
128 3300006237 Ga0097621_100120286 Ga0097621_1001202861 440
129 3300006358 Ga0068871_100061925 Ga0068871_1000619253 440
130 3300006871 Ga0075434_100010472 Ga0075434_1000104722 440
131 3300006871 Ga0075434_100119536 Ga0075434_1001195365 440
132 3300006881 Ga0068865_100017216 Ga0068865_1000172163 440
133 3300006944 Ga0099823_1000406 Ga0099823_100040621 440
134 3300007076 Ga0075435_100019013 Ga0075435_1000190132 440
135 3300009148 Ga0105243_10000738 Ga0105243_1000073821 440
136 3300009148 Ga0105243_10060183 Ga0105243_100601832 440
137 3300009176 Ga0105242_10007844 Ga0105242_100078447 440
138 3300009176 Ga0105242_10045897 Ga0105242_100458972 440
139 3300009177 Ga0105248_10352377 Ga0105248_103523771 440
140 3300009551 Ga0105238_10194021 Ga0105238_101940212 440
141 3300013297 Ga0157378_10030890 Ga0157378_100308903 440
142 3300013297 Ga0157378_10094637 Ga0157378_100946372 440
143 3300013297 Ga0157378_10120035 Ga0157378_101200352 440
144 3300013297 Ga0157378_10232869 Ga0157378_102328692 440
145 3300013306 Ga0163162_10178146 Ga0163162_101781462 440
146 3300013308 Ga0157375_10115455 Ga0157375_101154552 440
147 3300013308 Ga0157375_10173466 Ga0157375_101734662 440
148 3300013308 Ga0157375_10242001 Ga0157375_102420012 440
149 3300014325 Ga0163163_10000004 Ga0163163_10000004253 440
150 3300014325 Ga0163163_10081729 Ga0163163_100817292 440
151 3300014968 Ga0157379_10003791 Ga0157379_1000379113 440
152 3300014968 Ga0157379_10063625 Ga0157379_100636252 440
153 3300014969 Ga0157376_10056707 Ga0157376_100567073 440
154 3300017792 Ga0163161_10118236 Ga0163161_101182362 440
155 3300025231 Ga0207427_103046 Ga0207427_1030465 440
156 3300025261 Ga0209233_1000006 Ga0209233_1000006318 440
157 3300025901 Ga0207688_10005002 Ga0207688_100050024 440
158 3300025904 Ga0207647_10050760 Ga0207647_100507602 440
159 3300025910 Ga0207684_10000713 Ga0207684_1000071337 440
160 3300025915 Ga0207693_10022866 Ga0207693_100228663 440
161 3300025927 Ga0207687_10016935 Ga0207687_100169353 440
162 3300025927 Ga0207687_10105650 Ga0207687_101056502 440
163 3300025933 Ga0207706_10028365 Ga0207706_100283654 440
164 3300025933 Ga0207706_10101206 Ga0207706_101012062 440
165 3300025938 Ga0207704_10012416 Ga0207704_100124164 440
166 3300025942 Ga0207689_10009204 Ga0207689_100092046 440
167 3300025942 Ga0207689_10121370 Ga0207689_101213702 440
168 3300025961 Ga0207712_10072430 Ga0207712_100724302 440
169 3300025986 Ga0207658_10000492 Ga0207658_1000049222 440
170 3300026035 Ga0207703_10042453 Ga0207703_100424532 440
171 3300026075 Ga0207708_10034277 Ga0207708_100342772 440
172 3300026078 Ga0207702_10036589 Ga0207702_100365893 440
173 3300026088 Ga0207641_10012659 Ga0207641_100126594 440
174 3300026089 Ga0207648_10002031 Ga0207648_1000203121 440
175 3300026089 Ga0207648_10077184 Ga0207648_100771842 440
176 3300026116 Ga0207674_10020140 Ga0207674_100201402 440
177 3300026116 Ga0207674_10228964 Ga0207674_102289642 440
178 3300026118 Ga0207675_100026988 Ga0207675_1000269882 440
179 3300026121 Ga0207683_10013614 Ga0207683_100136143 440
180 3300026121 Ga0207683_10116989 Ga0207683_101169892 440
181 3300027296 Ga0209389_1000111 Ga0209389_10001114 440
182 3300027361 Ga0209489_100220 Ga0209489_10022093 440
183 3300027363 Ga0209700_100041 Ga0209700_100041169 440
184 3300028379 Ga0268266_10055513 Ga0268266_100555132 440
185 3300028381 Ga0268264_10000491 Ga0268264_1000049142 440
186 3300031911 Ga0307412_10015701 Ga0307412_100157012 440
187 3300035116 Ga0373945_0041243 Ga0373945_0041243_98_1498 440
188 3300035170 Ga0373943_0061732 Ga0373943_0061732_161_1561 440
189 3300035691 Ga0373931_0001187 Ga0373931_0001187_3499_4908 440
190 3300035691 Ga0373931_0023962 Ga0373931_0023962_987_2390 440
191 3300035695 Ga0373927_0030013 Ga0373927_0030013_628_2028 440
192 3300035725 Ga0373947_0026876 Ga0373947_0026876_1240_2640 440
193 3300037068 Ga0373925_0015126 Ga0373925_0015126_4124_5524 440
194 3300037418 Ga0395900_0001990 Ga0395900_0001990_14787_16181 440
195 3300037471 Ga0395905_0125180 Ga0395905_0125180_184_1578 440
196 3300046463 Ga0495653_0130560 Ga0495653_0130560_251_1651 440
197 3300046475 Ga0495639_0048789 Ga0495639_0048789_95_1495 440
198 3300046476 Ga0495662_0041882 Ga0495662_0041882_143_1543 440
199 3300046477 Ga0495664_0024382 Ga0495664_0024382_1115_2515 440
200 3300046514 Ga0495618_0034423 Ga0495618_0034423_1476_2876 440
201 3300046517 Ga0495630_0146868 Ga0495630_0146868_380_1780 440
202 3300046533 Ga0495640_0109670 Ga0495640_0109670_104_1504 440
203 3300046542 Ga0495597_0057196 Ga0495597_0057196_241_1641 440
204 3300046543 Ga0495645_0019549 Ga0495645_0019549_1656_3056 440
205 3300046557 Ga0495622_0001077 Ga0495622_0001077_269_1651 440
206 3300046663 Ga0495635_0013607 Ga0495635_0013607_3625_5025 440
207 3300047319 Ga0495674_0221319 Ga0495674_0221319_34_1434 440
208 3300047471 Ga0495684_0027502 Ga0495684_0027502_429_1829 440
209 3300048904 Ga0496101_0002082 Ga0496101_0002082_5139_6563 440
210 3300048904 Ga0496101_0029387 Ga0496101_0029387_1013_2413 440
211 3300048905 Ga0496102_0005151 Ga0496102_0005151_6875_8275 440
212 3300048905 Ga0496102_0021472 Ga0496102_0021472_267_1691 440
213 3300048906 Ga0496103_0004581 Ga0496103_0004581_1933_3333 440
214 3300048906 Ga0496103_0024633 Ga0496103_0024633_1123_2547 440
215 3300048907 Ga0496104_0007444 Ga0496104_0007444_1460_2860 440
216 3300048907 Ga0496104_0069097 Ga0496104_0069097_165_1589 440
217 3300048908 Ga0496105_0119348 Ga0496105_0119348_76_1500 440
218 3300048909 Ga0496106_0002187 Ga0496106_0002187_4344_5768 440
219 3300048910 Ga0496107_0038733 Ga0496107_0038733_1468_2892 440
220 3300048910 Ga0496107_0079074 Ga0496107_0079074_72_1475 440
221 3300048910 Ga0496107_0086170 Ga0496107_0086170_420_1820 440
222 3300048911 Ga0496108_0008748 Ga0496108_0008748_2003_3403 440
223 3300048911 Ga0496108_0073839 Ga0496108_0073839_1243_2667 440
224 3300048912 Ga0496109_0003384 Ga0496109_0003384_813_2237 440
225 3300048912 Ga0496109_0011802 Ga0496109_0011802_5041_6441 440
226 3300048913 Ga0496110_0000782 Ga0496110_0000782_16014_17438 440
227 3300048913 Ga0496110_0010104 Ga0496110_0010104_3731_5131 440
228 3300048915 Ga0496112_0053930 Ga0496112_0053930_2422_3846 440
229 3300048916 Ga0496113_0008132 Ga0496113_0008132_2228_3628 440
230 3300048916 Ga0496113_0011301 Ga0496113_0011301_1239_2663 440
231 3300048917 Ga0496114_0003597 Ga0496114_0003597_753_2153 440
232 3300048917 Ga0496114_0077777 Ga0496114_0077777_334_1758 440
233 3300048918 Ga0496115_0001995 Ga0496115_0001995_1684_3084 440
234 3300049570 Ga0501033_0008631 Ga0501033_0008631_4234_5616 440
235 3300049822 Ga0501035_0006038 Ga0501035_0006038_5295_6677 440
236 3300049823 Ga0501044_0010412 Ga0501044_0010412_6070_7464 440
237 3300049823 Ga0501044_0021157 Ga0501044_0021157_4641_6023 440
238 3300049823 Ga0501044_0048420 Ga0501044_0048420_2363_3745 440
239 3300050512 nmdc:mga0n895_116375_c1 nmdc:mga0n895_116375_c1_404_1807 440
240 3300050512 nmdc:mga0n895_29416_c1 nmdc:mga0n895_29416_c1_1027_2430 440
241 3300050512 nmdc:mga0n895_63083_c1 nmdc:mga0n895_63083_c1_1839_3242 440
242 3300050513 nmdc:mga0rr50_11712_c1 nmdc:mga0rr50_11712_c1_1265_2668 440
243 3300050513 nmdc:mga0rr50_27510_c1 nmdc:mga0rr50_27510_c1_913_2316 440
244 3300050515 nmdc:mga0a205_15059_c1 nmdc:mga0a205_15059_c1_2283_3686 440
245 3300053078 Ga0495612_0025888 Ga0495612_0025888_630_2030 440
246 3300053085 Ga0495619_0017892 Ga0495619_0017892_2005_3405 440
247 3300053119 Ga0500595_001103 Ga0500595_001103_6979_8361 440
248 3300053140 Ga0500573_0000060 Ga0500573_0000060_42102_43484 440

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01654

Cyt_bd_oxida_I

Cytochrome bd terminal oxidase subunit I

8

436

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
6rx4-assembly1.cif.gz_A the structure of bd oxidase from escherichia coli 0.7265 4 417
7ose-assembly1.cif.gz_D cytochrome bd-ii type oxidase with bound aurachin d 0.7173 4 417
7oy2-assembly1.cif.gz_C high resolution structure of cytochrome bd-ii oxidase from e. coli 0.7169 4 417
5ir6-assembly1.cif.gz_A the structure of bd oxidase from geobacillus thermodenitrificans 0.7136 2 415
6rko-assembly1.cif.gz_A cryo-em structure of the e. coli cytochrome bd-i oxidase at 2.68 a resolution 0.7107 4 417
ID Description Score Start End Superfamily
af_A0A0P0WWC3_5_138_1.20.5.4130 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.514 23 148 1.20.5.4130
af_A0A0P0WWC3_5_138_1.20.5.4130 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.4862 23 148 1.20.5.4130
5xflA02 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Alpha-catenin/vinculin-like 0.4717 31 146 1.20.120.230
af_Q4FZV2_37_153_1.10.10.1740 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Transmembrane protein 14-like 0.4656 21 148 1.10.10.1740
5xflA02 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Alpha-catenin/vinculin-like 0.4526 31 146 1.20.120.230
ID Description Score Start End GO Terms
AF-A0A5F2GDX4-F1-model_v4 Cytochrome ubiquinol oxidase subunit I 0.9758 1 148 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069
AF-A0A521WJY6-F1-model_v4 Cytochrome ubiquinol oxidase subunit I 0.9673 4 149 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069
AF-Q9AMB7-F1-model_v4 Cytochrome D ubiquinol oxidase subunit I 0.9622 5 144 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069
AF-A0A838EKF6-F1-model_v4 Cytochrome ubiquinol oxidase subunit I 0.9612 4 138 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069
AF-A0A257MWL6-F1-model_v4 Cytochrome bd plastoquinol oxidase subunit 1 apoprotein 0.9612 4 134 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069

Feature Viewer

pLDDT pTM Quality
73.1 0.72 High
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Predicted Structure (AlphaFold2)

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