F359774

General Info

Members Datasets Scaffolds Average Seq Length
248 216 496 292

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10000300|Ga0075364_1000030010
Length 360
Sequence MMDARLAAACGPGEDGLRRGRDPSSDGFRGNRETLRHRPFIAVPSRLESLRCPSPHSGIAMTSADVLHRGSIVALVTPMHEDGSVDYATLRRLVDWHVAEGTDCIGVVGTTGESPTVDVEEHCEIIRVAVEQAAGRVPVMAGCGGNSTAEAIALARFARTVGASSQLQVVPYYNKPGQEGQYRHFKAIAEATGDLPIVLYNVPGRTVADMQHATVLRLAQVPGIAGIKEATGNLERAQWLIREAPAGFAVYSGDDATAVALMLCGGHGNVSVTANVAPRLMHALCVAALAGDVAAAMRIQLQLLPLHRQLFAEANPIPVKWAMQRLGLCGGTLRLPMTELESGNQAPLEQALRDAGLLTA

Samples

Sample ID Description Type Environment
1 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
48 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
97 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
102 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
103 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
104 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
105 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
106 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
107 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
108 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
109 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
110 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
113 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
114 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
115 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
116 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
117 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
118 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
119 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
120 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
121 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
122 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
123 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
124 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
125 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
126 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
127 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
130 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
131 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
132 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
133 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
134 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
135 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
136 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
137 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
138 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
139 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
140 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
141 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
142 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
143 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
144 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
145 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
146 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
147 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
148 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
149 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
150 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
151 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
152 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
153 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
154 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
155 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
156 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
157 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
158 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
159 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
160 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
161 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
162 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
163 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
164 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
165 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
166 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
167 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
168 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
169 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
172 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
173 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
174 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
175 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
176 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
177 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
178 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
179 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
181 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
182 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
185 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
186 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
187 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
188 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
189 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
190 2510065053 Pseudomonas sp. MOIL14HWK12:I1 Isolate Rhizosphere
191 2510065055 Pseudomonas sp. MOIL14HWK12:I2 Isolate Rhizosphere
192 2510065058 Pseudomonas oleovorans MOIL14HWK12 Isolate Rhizosphere
193 2574179768 Azoarcus communis DSM 12120 Isolate Unclassified
194 2600254954 Pseudomonas sp. NFACC19-2 Isolate Rhizoplane
195 2600255389 Pseudomonas sp. NFPP33 Isolate Rhizoplane
196 2773857672 Pseudomonas sp. 1766 Isolate Unclassified
197 2808606379 Pseudomonas sp. SJZ079 Isolate Rhizosphere
198 2811994881 Pseudomonas sp. SLBN-26 Isolate Unclassified
199 2823421272 Pseudomonas mendocina S5.2 Isolate Rhizoplane
200 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
201 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
202 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
203 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
204 2917832318 Pseudomonas rhizoryzae RY24 Isolate Unclassified
205 2919125081 Pseudomonas psychrotolerans 1545 Isolate Rhizosphere
206 2919501602 Pseudomonas alcaliphila 3512 Isolate Unclassified
207 2923519811 Pseudomonas otitidis SLBN-103 Isolate Rhizosphere
208 2926063275 Pseudomonas sp. 3400 Isolate Unclassified
209 2952252522 Salinicola sp. DM10 Isolate Unclassified
210 2974298342 Pseudomonas sp. SORGH_AS 211 Isolate Unclassified
211 2984499530 Pseudomonas sp. SORGH_AS199 Isolate Aerial Root
212 2984504281 Pseudomonas psychrotolerans SORGH_AS201 Isolate Aerial Root
213 2990196909 Pseudomonas mangrovi TC-11 Isolate Unclassified
214 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere
215 8016728285 Pseudomonas psychrotolerans SORGH_AS 227 Isolate Unclassified
216 8034962539 Pseudomonas sediminis PI11 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.11
Metatranscriptomes 0
Isolates 10.89

Biome Distribution

Category Percentage (%)
Aerial Root 0.81
Bulb 0
Endosphere 4.03
Nodule 0.81
Rhizoplane 1.21
Rhizosphere 88.31
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075364_10000300 3300006051 Bacteria 24079
2 Ga0070658_10086492 3300005327 Bacteria 2579
3 Ga0070676_10168980 3300005328 Bacteria 1413
4 Ga0070683_100067829 3300005329 Bacteria 3323
5 Ga0070660_100073777 3300005339 Bacteria 2668
6 Ga0070689_100227921 3300005340 Bacteria 1531
7 Ga0070661_100006902 3300005344 Bacteria 7831
8 Ga0070669_100268124 3300005353 Bacteria 1364
9 Ga0070659_100015175 3300005366 Bacteria 5763
10 Ga0070714_100008109 3300005435 Bacteria 8185
11 Ga0070713_100004098 3300005436 Bacteria 9709
12 Ga0070710_10253067 3300005437 Bacteria 1133
13 Ga0070701_10134664 3300005438 Bacteria 1407
14 Ga0070700_100117418 3300005441 Bacteria 1778
15 Ga0070708_100001708 3300005445 Bacteria 16885
16 Ga0070681_10006882 3300005458 Bacteria 11068
17 Ga0068867_100048548 3300005459 Bacteria 3123
18 Ga0070699_100006174 3300005518 Bacteria 10469
19 Ga0070684_100007484 3300005535 Bacteria 8493
20 Ga0068853_100370423 3300005539 Bacteria 1336
21 Ga0070686_100113615 3300005544 Bacteria 1849
22 Ga0070693_100004495 3300005547 Bacteria 6600
23 Ga0070693_100202138 3300005547 Bacteria 1291
24 Ga0070665_100064459 3300005548 Bacteria 3674
25 Ga0068855_100010216 3300005563 Bacteria 11317
26 Ga0070664_100002258 3300005564 Bacteria 15506
27 Ga0068857_100027500 3300005577 Bacteria 5016
28 Ga0068854_100141570 3300005578 Bacteria 1846
29 Ga0068856_100003646 3300005614 Bacteria 15472
30 Ga0068852_100142720 3300005616 Bacteria 2218
31 Ga0068864_100329451 3300005618 Bacteria 1436
32 Ga0068851_10034376 3300005834 Bacteria 2530
33 Ga0068863_100083817 3300005841 Bacteria 3021
34 Ga0068858_100006460 3300005842 Bacteria 11413
35 Ga0068860_100014412 3300005843 Bacteria 7745
36 Ga0070717_10024777 3300006028 Bacteria 4768
37 Ga0075365_10091852 3300006038 Bacteria 2069
38 Ga0075364_10046302 3300006051 Bacteria 2832
39 Ga0075369_10049500 3300006186 Bacteria 1815
40 Ga0075366_10016867 3300006195 Bacteria 4198
41 Ga0075366_10139957 3300006195 Bacteria 1463
42 Ga0097621_100211626 3300006237 Bacteria 1687
43 Ga0068871_100087255 3300006358 Bacteria 2594
44 Ga0075428_100174862 3300006844 Bacteria 2326
45 Ga0075434_100069085 3300006871 Bacteria 3521
46 Ga0075434_100124283 3300006871 Bacteria 2597
47 Ga0068865_100087654 3300006881 Bacteria 2250
48 Ga0075436_100000352 3300006914 Bacteria 29413
49 Ga0099826_10000083 3300006948 Bacteria 47663
50 Ga0075435_100287850 3300007076 Bacteria 1403
51 Ga0099794_10000186 3300007265 Bacteria 22688
52 Ga0105251_10010036 3300009011 Bacteria 5536
53 Ga0105240_10000332 3300009093 Bacteria 88613
54 Ga0111539_10002368 3300009094 Bacteria 25057
55 Ga0105245_10025239 3300009098 Bacteria 5225
56 Ga0105241_10179505 3300009174 Bacteria 1755
57 Ga0105242_10010494 3300009176 Bacteria 7110
58 Ga0105242_10240272 3300009176 Bacteria 1628
59 Ga0105248_10056899 3300009177 Bacteria 4388
60 Ga0105248_10098011 3300009177 Bacteria 3303
61 Ga0105248_10106714 3300009177 Bacteria 3158
62 Ga0105248_10292690 3300009177 Bacteria 1833
63 Ga0105238_10001058 3300009551 Bacteria 27802
64 Ga0157371_10489789 3300013102 Bacteria 907
65 Ga0157371_10489790 3300013102 Bacteria 907
66 Ga0157370_10092531 3300013104 Bacteria 2838
67 Ga0157369_10003196 3300013105 Bacteria 19535
68 Ga0157369_10005246 3300013105 Bacteria 15114
69 Ga0157374_10000104 3300013296 Bacteria 78523
70 Ga0157374_10173219 3300013296 Bacteria 2106
71 Ga0157378_10067380 3300013297 Bacteria 3208
72 Ga0163162_10103815 3300013306 Bacteria 2937
73 Ga0163162_10175994 3300013306 Bacteria 2265
74 Ga0157372_10003870 3300013307 Bacteria 16083
75 Ga0157372_10668093 3300013307 Bacteria 1210
76 Ga0157375_10308596 3300013308 Bacteria 1746
77 Ga0157380_10058672 3300014326 Bacteria 3068
78 Ga0182008_10035820 3300014497 Bacteria 2484
79 Ga0157379_10037106 3300014968 Bacteria 4345
80 Ga0157376_10102699 3300014969 Bacteria 2501
81 Ga0163161_10119532 3300017792 Bacteria 1979
82 Ga0213876_10053112 3300021384 Bacteria 2141
83 Ga0207656_10061745 3300025321 Bacteria 1646
84 Ga0207655_1015956 3300025728 Bacteria 4139
85 Ga0207699_10148183 3300025906 Bacteria 1550
86 Ga0207705_10032185 3300025909 Bacteria 3747
87 Ga0207654_10083675 3300025911 Bacteria 1927
88 Ga0207695_10010670 3300025913 Bacteria 11222
89 Ga0207662_10133898 3300025918 Bacteria 1565
90 Ga0207694_10004824 3300025924 Bacteria 10468
91 Ga0207700_10022730 3300025928 Bacteria 4307
92 Ga0207690_10079616 3300025932 Bacteria 2284
93 Ga0207686_10022742 3300025934 Bacteria 3613
94 Ga0207709_10185735 3300025935 Bacteria 1472
95 Ga0207670_10078037 3300025936 Bacteria 2309
96 Ga0207669_10164553 3300025937 Bacteria 1571
97 Ga0207669_10169752 3300025937 Bacteria 1551
98 Ga0207704_10201309 3300025938 Bacteria 1457
99 Ga0207711_10056538 3300025941 Bacteria 3372
100 Ga0207711_10077121 3300025941 Bacteria 2904
101 Ga0207711_10404265 3300025941 Bacteria 1269
102 Ga0207679_10102916 3300025945 Bacteria 2237
103 Ga0207679_10195413 3300025945 Bacteria 1686
104 Ga0207667_10010454 3300025949 Bacteria 10846
105 Ga0207640_10152146 3300025981 Bacteria 1701
106 Ga0207639_10410647 3300026041 Bacteria 1222
107 Ga0207639_10454382 3300026041 Bacteria 1163
108 Ga0207708_10150942 3300026075 Bacteria 1829
109 Ga0207708_10176447 3300026075 Bacteria 1695
110 Ga0207641_10039030 3300026088 Bacteria 3971
111 Ga0207648_10119027 3300026089 Bacteria 2321
112 Ga0207674_10000064 3300026116 Bacteria 109914
113 Ga0207675_100281135 3300026118 Bacteria 1617
114 Ga0207698_10016069 3300026142 Bacteria 5035
115 Ga0207698_10204143 3300026142 Bacteria 1772
116 Ga0209282_1000030 3300027666 Bacteria 154522
117 Ga0209588_1000023 3300027671 Bacteria 91412
118 Ga0207428_10009721 3300027907 Bacteria 8618
119 Ga0268266_10031133 3300028379 Bacteria 4530
120 Ga0268264_10010278 3300028381 Bacteria 7747
121 Ga0265338_10003955 3300028800 Bacteria 20413
122 Ga0268256_1008978 3300030500 Bacteria 3369
123 Ga0265340_10051193 3300031247 Bacteria 2001
124 Ga0265331_10129660 3300031250 Bacteria 1151
125 Ga0307408_100000195 3300031548 Bacteria 65727
126 Ga0265314_10060332 3300031711 Bacteria 2589
127 Ga0307405_10050451 3300031731 Bacteria 2577
128 Ga0307413_10176252 3300031824 Bacteria 1519
129 Ga0307412_10419872 3300031911 Bacteria 1094
130 Ga0307409_100189305 3300031995 Bacteria 1830
131 Ga0307416_100044346 3300032002 Bacteria 3491
132 Ga0307416_100121545 3300032002 Bacteria 2329
133 Ga0307414_10042787 3300032004 Bacteria 3080
134 Ga0373934_0108016 3300035086 Bacteria 1127
135 Ga0316574_0062104 3300035398 Bacteria 2347
136 Ga0316574_0165054 3300035398 Bacteria 1426
137 Ga0395905_0235786 3300037471 Bacteria 1710
138 Ga0436365_1392470 3300039437 Bacteria 2448
139 Ga0439436_0001268 3300041404 Bacteria 7210
140 Ga0439438_014808 3300041405 Bacteria 2312
141 Ga0439447_000819 3300041407 Bacteria 11401
142 Ga0439466_0002143 3300041411 Bacteria 7734
143 Ga0439432_010555 3300042006 Bacteria 3193
144 Ga0439452_002445 3300042010 Bacteria 6840
145 Ga0439457_011939 3300042014 Bacteria 1964
146 Ga0450923_005343 3300042125 Bacteria 2068
147 Ga0439446_0005491 3300042156 Bacteria 3263
148 Ga0439434_0015587 3300042435 Bacteria 2266
149 Ga0439464_0000975 3300042439 Bacteria 6481
150 Ga0451577_0232003 3300042876 Bacteria 1669
151 Ga0453684_0046394 3300044712 Bacteria 5779
152 Ga0495627_003493 3300046453 Bacteria 6909
153 Ga0495629_0000997 3300046459 Bacteria 22703
154 Ga0495653_0004047 3300046463 Bacteria 11846
155 Ga0495580_0001067 3300046472 Bacteria 24094
156 Ga0495580_0007965 3300046472 Bacteria 8471
157 Ga0495662_0075013 3300046476 Bacteria 1641
158 Ga0495664_0087683 3300046477 Bacteria 1870
159 Ga0495584_0026106 3300046491 Bacteria 2959
160 Ga0495585_0001161 3300046492 Bacteria 21436
161 Ga0495585_0100250 3300046492 Bacteria 1549
162 Ga0495596_0002633 3300046500 Bacteria 9504
163 Ga0495616_0077628 3300046513 Bacteria 1594
164 Ga0495631_0008185 3300046518 Bacteria 5275
165 Ga0495631_0031108 3300046518 Bacteria 2417
166 Ga0495644_0009752 3300046523 Bacteria 3698
167 Ga0495652_0279022 3300046529 Bacteria 1224
168 Ga0495665_0002673 3300046531 Bacteria 9612
169 Ga0495586_0188568 3300046535 Bacteria 1168
170 Ga0495597_0002927 3300046542 Bacteria 10370
171 Ga0495622_0046890 3300046557 Bacteria 2008
172 Ga0495656_0026689 3300046615 Bacteria 2301
173 Ga0495668_0017423 3300046616 Bacteria 4166
174 Ga0495668_0042130 3300046616 Bacteria 2542
175 Ga0495611_0006822 3300046648 Bacteria 4851
176 Ga0495625_0062532 3300046660 Bacteria 2631
177 Ga0495661_0044951 3300046665 Bacteria 2703
178 Ga0495646_0001664 3300046680 Bacteria 13279
179 Ga0495658_0207676 3300046683 Bacteria 1223
180 Ga0495624_0000859 3300046690 Bacteria 24093
181 Ga0495670_0058856 3300046691 Bacteria 1928
182 Ga0495670_0153913 3300046691 Bacteria 1206
183 Ga0495671_0041852 3300046692 Bacteria 2305
184 Ga0495589_0040782 3300046794 Bacteria 2317
185 Ga0495636_0050879 3300047318 Bacteria 1735
186 Ga0495674_0003475 3300047319 Bacteria 15309
187 Ga0495672_0052033 3300047320 Bacteria 2407
188 Ga0495676_0019642 3300047321 Bacteria 5941
189 Ga0495683_0054054 3300047323 Bacteria 2002
190 Ga0495677_0007223 3300047445 Bacteria 4155
191 Ga0495673_0016812 3300047469 Bacteria 3729
192 Ga0495681_0004549 3300047470 Bacteria 9455
193 Ga0495593_0002523 3300047673 Bacteria 10999
194 Ga0495615_0013365 3300048090 Bacteria 1714
195 Ga0495626_0014992 3300048091 Bacteria 3975
196 Ga0501034_0004499 3300049571 Bacteria 15495
197 Ga0501034_0171478 3300049571 Bacteria 2137
198 Ga0501047_0022655 3300049581 Bacteria 6031
199 Ga0501069_0000252 3300049585 Bacteria 24198
200 Ga0501070_0003938 3300049586 Bacteria 12795
201 Ga0501073_0001212 3300049589 Bacteria 18789
202 Ga0501074_0002516 3300049590 Bacteria 12787
203 Ga0501076_0297593 3300049592 Bacteria 1323
204 Ga0501079_0002895 3300049741 Bacteria 12540
205 Ga0501080_0078722 3300049742 Bacteria 3065
206 Ga0501080_0079297 3300049742 Bacteria 3052
207 Ga0501083_0006965 3300049744 Bacteria 8019
208 Ga0501035_0000006 3300049822 Bacteria 369040
209 Ga0501035_0124367 3300049822 Bacteria 2252
210 Ga0501044_0013109 3300049823 Bacteria 8975
211 nmdc:mga00v17_265_c1 3300050491 Bacteria 30890
212 nmdc:mga00v17_43047_c1 3300050491 Bacteria 2718
213 nmdc:mga0k408_144510_c1 3300050493 Bacteria 1416
214 nmdc:mga08y16_3242_c1 3300050511 Bacteria 16850
215 nmdc:mga0n895_290346_c1 3300050512 Bacteria 1658
216 nmdc:mga0n895_38626_c1 3300050512 Bacteria 4626
217 nmdc:mga08x19_688_c1 3300050514 Bacteria 21687
218 nmdc:mga0a205_189712_c1 3300050515 Bacteria 1948
219 Ga0500651_0002165 3300053093 Bacteria 10261
220 Ga0501084_0025117 3300054114 Bacteria 4971
221 Ga0501082_0013647 3300060353 Bacteria 6984
222 2510285204 2510065053 Bacteria 5005518
223 2510293960 2510065055 Bacteria 5037935
224 2510312993 2510065058 Bacteria 5005894
225 2574430977 2574179768 Bacteria 4907129
226 2600446359 2600254954 Bacteria 5100516
227 2602010582 2600255389 Bacteria 5275336
228 2774128293 2773857672 Bacteria 4993178
229 2808940754 2808606379 Bacteria 5022697
230 2812371146 2811994881 Bacteria 6298475
231 2823423118 2823421272 Bacteria 5372474
232 2895502446 2895498888 Bacteria 5283788
233 2895514225 2895511927 Bacteria 6802080
234 2895524296 2895522137 Bacteria 3284416
235 2895526393 2895525241 Bacteria 3388457
236 2917835339 2917832318 Bacteria 5346010
237 2919129318 2919125081 Bacteria 5385106
238 2919505477 2919501602 Bacteria 5286340
239 2923525254 2923519811 Bacteria 6298479
240 2926067154 2926063275 Bacteria 5285848
241 2952254248 2952252522 Bacteria 4171745
242 2974299550 2974298342 Bacteria 4840922
243 2984501904 2984499530 Bacteria 5020881
244 2984504610 2984504281 Bacteria 5262371
245 2990200003 2990196909 Bacteria 4054280
246 651176783 651053060 Bacteria 4689946
247 8016733577 8016728285 Bacteria 5263933
248 8034963955 8034962539 Bacteria 4884839
249 Ga0075364_10000300
250 Ga0070658_10086492
251 Ga0070676_10168980
252 Ga0070683_100067829
253 Ga0070660_100073777
254 Ga0070689_100227921
255 Ga0070661_100006902
256 Ga0070669_100268124
257 Ga0070659_100015175
258 Ga0070714_100008109
259 Ga0070713_100004098
260 Ga0070710_10253067
261 Ga0070701_10134664
262 Ga0070700_100117418
263 Ga0070708_100001708
264 Ga0070681_10006882
265 Ga0068867_100048548
266 Ga0070699_100006174
267 Ga0070684_100007484
268 Ga0068853_100370423
269 Ga0070686_100113615
270 Ga0070693_100004495
271 Ga0070693_100202138
272 Ga0070665_100064459
273 Ga0068855_100010216
274 Ga0070664_100002258
275 Ga0068857_100027500
276 Ga0068854_100141570
277 Ga0068856_100003646
278 Ga0068852_100142720
279 Ga0068864_100329451
280 Ga0068851_10034376
281 Ga0068863_100083817
282 Ga0068858_100006460
283 Ga0068860_100014412
284 Ga0070717_10024777
285 Ga0075365_10091852
286 Ga0075364_10046302
287 Ga0075369_10049500
288 Ga0075366_10016867
289 Ga0075366_10139957
290 Ga0097621_100211626
291 Ga0068871_100087255
292 Ga0075428_100174862
293 Ga0075434_100069085
294 Ga0075434_100124283
295 Ga0068865_100087654
296 Ga0075436_100000352
297 Ga0099826_10000083
298 Ga0075435_100287850
299 Ga0099794_10000186
300 Ga0105251_10010036
301 Ga0105240_10000332
302 Ga0111539_10002368
303 Ga0105245_10025239
304 Ga0105241_10179505
305 Ga0105242_10010494
306 Ga0105242_10240272
307 Ga0105248_10056899
308 Ga0105248_10098011
309 Ga0105248_10106714
310 Ga0105248_10292690
311 Ga0105238_10001058
312 Ga0157371_10489789
313 Ga0157371_10489790
314 Ga0157370_10092531
315 Ga0157369_10003196
316 Ga0157369_10005246
317 Ga0157374_10000104
318 Ga0157374_10173219
319 Ga0157378_10067380
320 Ga0163162_10103815
321 Ga0163162_10175994
322 Ga0157372_10003870
323 Ga0157372_10668093
324 Ga0157375_10308596
325 Ga0157380_10058672
326 Ga0182008_10035820
327 Ga0157379_10037106
328 Ga0157376_10102699
329 Ga0163161_10119532
330 Ga0213876_10053112
331 Ga0207656_10061745
332 Ga0207655_1015956
333 Ga0207699_10148183
334 Ga0207705_10032185
335 Ga0207654_10083675
336 Ga0207695_10010670
337 Ga0207662_10133898
338 Ga0207694_10004824
339 Ga0207700_10022730
340 Ga0207690_10079616
341 Ga0207686_10022742
342 Ga0207709_10185735
343 Ga0207670_10078037
344 Ga0207669_10164553
345 Ga0207669_10169752
346 Ga0207704_10201309
347 Ga0207711_10056538
348 Ga0207711_10077121
349 Ga0207711_10404265
350 Ga0207679_10102916
351 Ga0207679_10195413
352 Ga0207667_10010454
353 Ga0207640_10152146
354 Ga0207639_10410647
355 Ga0207639_10454382
356 Ga0207708_10150942
357 Ga0207708_10176447
358 Ga0207641_10039030
359 Ga0207648_10119027
360 Ga0207674_10000064
361 Ga0207675_100281135
362 Ga0207698_10016069
363 Ga0207698_10204143
364 Ga0209282_1000030
365 Ga0209588_1000023
366 Ga0207428_10009721
367 Ga0268266_10031133
368 Ga0268264_10010278
369 Ga0265338_10003955
370 Ga0268256_1008978
371 Ga0265340_10051193
372 Ga0265331_10129660
373 Ga0307408_100000195
374 Ga0265314_10060332
375 Ga0307405_10050451
376 Ga0307413_10176252
377 Ga0307412_10419872
378 Ga0307409_100189305
379 Ga0307416_100044346
380 Ga0307416_100121545
381 Ga0307414_10042787
382 Ga0373934_0108016
383 Ga0316574_0062104
384 Ga0316574_0165054
385 Ga0395905_0235786
386 Ga0436365_1392470
387 Ga0439436_0001268
388 Ga0439438_014808
389 Ga0439447_000819
390 Ga0439466_0002143
391 Ga0439432_010555
392 Ga0439452_002445
393 Ga0439457_011939
394 Ga0450923_005343
395 Ga0439446_0005491
396 Ga0439434_0015587
397 Ga0439464_0000975
398 Ga0451577_0232003
399 Ga0453684_0046394
400 Ga0495627_003493
401 Ga0495629_0000997
402 Ga0495653_0004047
403 Ga0495580_0001067
404 Ga0495580_0007965
405 Ga0495662_0075013
406 Ga0495664_0087683
407 Ga0495584_0026106
408 Ga0495585_0001161
409 Ga0495585_0100250
410 Ga0495596_0002633
411 Ga0495616_0077628
412 Ga0495631_0008185
413 Ga0495631_0031108
414 Ga0495644_0009752
415 Ga0495652_0279022
416 Ga0495665_0002673
417 Ga0495586_0188568
418 Ga0495597_0002927
419 Ga0495622_0046890
420 Ga0495656_0026689
421 Ga0495668_0017423
422 Ga0495668_0042130
423 Ga0495611_0006822
424 Ga0495625_0062532
425 Ga0495661_0044951
426 Ga0495646_0001664
427 Ga0495658_0207676
428 Ga0495624_0000859
429 Ga0495670_0058856
430 Ga0495670_0153913
431 Ga0495671_0041852
432 Ga0495589_0040782
433 Ga0495636_0050879
434 Ga0495674_0003475
435 Ga0495672_0052033
436 Ga0495676_0019642
437 Ga0495683_0054054
438 Ga0495677_0007223
439 Ga0495673_0016812
440 Ga0495681_0004549
441 Ga0495593_0002523
442 Ga0495615_0013365
443 Ga0495626_0014992
444 Ga0501034_0004499
445 Ga0501034_0171478
446 Ga0501047_0022655
447 Ga0501069_0000252
448 Ga0501070_0003938
449 Ga0501073_0001212
450 Ga0501074_0002516
451 Ga0501076_0297593
452 Ga0501079_0002895
453 Ga0501080_0078722
454 Ga0501080_0079297
455 Ga0501083_0006965
456 Ga0501035_0000006
457 Ga0501035_0124367
458 Ga0501044_0013109
459 nmdc:mga00v17_265_c1
460 nmdc:mga00v17_43047_c1
461 nmdc:mga0k408_144510_c1
462 nmdc:mga08y16_3242_c1
463 nmdc:mga0n895_290346_c1
464 nmdc:mga0n895_38626_c1
465 nmdc:mga08x19_688_c1
466 nmdc:mga0a205_189712_c1
467 Ga0500651_0002165
468 Ga0501084_0025117
469 Ga0501082_0013647
470 2510285204
471 2510293960
472 2510312993
473 2574430977
474 2600446359
475 2602010582
476 2774128293
477 2808940754
478 2812371146
479 2823423118
480 2895502446
481 2895514225
482 2895524296
483 2895526393
484 2917835339
485 2919129318
486 2919505477
487 2923525254
488 2926067154
489 2952254248
490 2974299550
491 2984501904
492 2984504610
493 2990200003
494 651176783
495 8016733577
496 8034963955

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00701

DHDPS

Dihydrodipicolinate synthetase family

67

355

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6mqh-assembly1.cif.gz_A crystal structure of 4-hydroxy-tetrahydrodipicolinate synthase (htpa synthase) from burkholderia mallei 0.9908 4 293
3qze-assembly2.cif.gz_D crystal structure of dapa (pa1010) at 1.6 a resolution 0.9899 5 293
6p90-assembly1.cif.gz_B crystal structure of padhdps2-h56q mutant 0.9894 4 293
3flu-assembly1.cif.gz_B crystal structure of dihydrodipicolinate synthase from the pathogen neisseria meningitidis 0.9878 4 293
3noe-assembly1.cif.gz_A crystal structure of dihydrodipicolinate synthase from pseudomonas aeruginosa 0.9874 4 294
ID Description Score Start End Superfamily
3a5fA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9757 5 293 3.20.20.70
6nvaA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9753 1 293 3.20.20.70
2rfgB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9741 4 288 3.20.20.70
6nvaA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9721 1 293 3.20.20.70
3pb2D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9674 2 293 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A4Q3JXT2-F1-model_v4 deleted 0.9938 59 293
AF-A0A2P5KB96-F1-model_v4 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7) 0.9924 3 294 GO:0005829
GO:0008840
GO:0009089
GO:0019877
AF-A0A521ZAB2-F1-model_v4 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7) 0.9915 4 294 GO:0005829
GO:0008840
GO:0009089
GO:0019877
AF-A0A1J9PSK2-F1-model_v4 deleted 0.9915 4 291
AF-A0A1K2DBG4-F1-model_v4 deleted 0.9914 5 294

Map