F359745

General Info

Members Datasets Scaffolds Average Seq Length
248 201 207 563

Family's Representative Sequence

Representative Sequence 3300005616|Ga0068852_100017327|Ga0068852_1000173272
Length 587
Sequence VPAEGSSLDPVLTRLLRTFLRPYRRWLTFVVVLQLIGTVASLYLPTLNGDIIDRGVARGDTDYILRTGAIMLAVGLLQVLSNIAAVFFGAKAAMSFGRDLRSTLFHRVGEFSAREVGHFGAPSLITRGTNDVQQVQMLVVMACTLMVAAPISIVGGIILALRQDLGLSWLLGVSLPFLVVVIGIIVTKLIPQFRQMQDRIDTVNRILREQISGIRVVRAFVREPLEEQRFAAANDELTVTGVRAGRLMMSMFPTVMLVLNLSSVAVLWFGADRISHGQTQIGDLTAFLSYLAQILMSVMMATFMVMMIPRAAVCAERIKEVLDTDPSVAPPANPIDIVDRQAEVTFQGVSFAYPGAAAPVLEDITVHCGPGTTTAFVGSTGSGKSTLVSLVARLYDVTDGSLLVDGVDVRELDPTALSARVGLVPQRAYLFSGTVASNLRYGNPAATDEQLWEALRIAQAEDFVRAMPEQLEASISQGGTNVSGGQRQRLAIARALVLKPEIYLFDESFSALDLGTDARLRAALRPVTRDAAVLIVASRVSTIIDADQIVVLEAGRIVGLGRHDELVQTCPTYAEIVESQLSSEDAA

Samples

Sample ID Description Type Environment
1 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
2 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
3 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
4 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
5 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
6 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
7 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
8 2739367653 Kocuria sp. OV113 Isolate Unclassified
9 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
10 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
11 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
12 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
13 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
14 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
15 2857727296 Kocuria sp. R-72562 Isolate Unclassified
16 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
17 2858868258 Micromonospora sp. MH33 Isolate Unclassified
18 2858882152 Micromonospora noduli MED15 Isolate Nodule
19 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
20 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
21 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
22 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
23 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
24 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
25 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
26 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
27 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
28 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
29 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
30 2902582711 Micromonospora sp. AP08 Isolate Unclassified
31 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
32 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
33 2928153084 Leifsonia sp. 563 Isolate Unclassified
34 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
35 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
36 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
37 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
38 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
39 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
40 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
41 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
42 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
43 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
44 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
45 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
46 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
47 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
48 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
49 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
50 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
51 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
52 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
53 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
54 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
55 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
56 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
57 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
58 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
59 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
60 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
61 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
62 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
63 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
64 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
65 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
66 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
67 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
68 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
69 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
70 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
71 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
72 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
73 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
74 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
75 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
76 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
77 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
78 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
79 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
80 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
81 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
82 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
83 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
84 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
85 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
86 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
87 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
88 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
89 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
90 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
91 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
92 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
93 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
94 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
95 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
96 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
97 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
98 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
102 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
103 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
105 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
127 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
130 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
131 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
132 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
133 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
134 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
135 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
136 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
137 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
138 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
139 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
140 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
141 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
142 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
143 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
144 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
145 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
146 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
149 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
150 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
151 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
156 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
157 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
158 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
159 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
160 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
173 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
174 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
175 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
176 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
177 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
178 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
179 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
180 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
181 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
182 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
183 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
184 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
185 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
186 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
188 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
189 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
190 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
191 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
192 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
193 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
194 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
195 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
196 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
197 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
198 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
199 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
200 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
201 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.66
Metatranscriptomes 0.81
Isolates 16.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.66
Nodule 2.42
Rhizoplane 6.85
Rhizosphere 70.16
Stem 0
Stem Tuber 0
Unclassified 12.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10008177 3300001979 Bacteria 4193
2 JGI24739J22299_10006281 3300001989 Bacteria 4486
3 JGI24735J21928_10000927 3300002067 Bacteria 10494
4 JGI25164J39214_1001256 3300002772 Bacteria 6682
5 JGI25165J46597_1000014 3300003214 Bacteria 390383
6 Ga0006562J51391_1205203 3300003578 Bacteria 2616
7 Ga0006562J51391_1205204 3300003578 Bacteria 2600
8 Ga0055539_1000006 3300003752 Bacteria 580055
9 Ga0055533_1000002 3300003756 Bacteria 1196393
10 Ga0055525_1000022 3300003759 Bacteria 368755
11 Ga0055541_1004300 3300003841 Bacteria 2599
12 Ga0070658_10022477 3300005327 Bacteria 5061
13 Ga0070676_10018958 3300005328 Bacteria 3821
14 Ga0070683_100068429 3300005329 Bacteria 3308
15 Ga0070683_100100188 3300005329 Bacteria 2727
16 Ga0068869_100008538 3300005334 Bacteria 6611
17 Ga0068868_100002984 3300005338 Bacteria 11759
18 Ga0068868_100026574 3300005338 Bacteria 4413
19 Ga0070660_100018592 3300005339 Bacteria 5081
20 Ga0070661_100037665 3300005344 Bacteria 3518
21 Ga0070692_10025342 3300005345 Bacteria 2922
22 Ga0070668_100005284 3300005347 Bacteria 9578
23 Ga0070674_100023524 3300005356 Bacteria 3989
24 Ga0070659_100002736 3300005366 Bacteria 12542
25 Ga0070713_100046410 3300005436 Bacteria 3564
26 Ga0070708_100011017 3300005445 Bacteria 7345
27 Ga0070678_100001181 3300005456 Bacteria 13872
28 Ga0070662_100039785 3300005457 Bacteria 3345
29 Ga0070681_10020767 3300005458 Bacteria 6579
30 Ga0068867_100063189 3300005459 Bacteria 2752
31 Ga0070685_10034040 3300005466 Bacteria 2867
32 Ga0070698_100029944 3300005471 Bacteria 5648
33 Ga0070679_100093972 3300005530 Bacteria 2986
34 Ga0070684_100004615 3300005535 Bacteria 10505
35 Ga0068855_100105858 3300005563 Bacteria 3234
36 Ga0070664_100004589 3300005564 Bacteria 11085
37 Ga0068857_100002582 3300005577 Bacteria 14844
38 Ga0068854_100027084 3300005578 Bacteria 3947
39 Ga0068852_100017327 3300005616 Bacteria 5649
40 Ga0068852_100035205 3300005616 Bacteria 4174
41 Ga0068859_100027989 3300005617 Bacteria 5651
42 Ga0068859_100031719 3300005617 Bacteria 5307
43 Ga0068861_100009346 3300005719 Bacteria 6767
44 Ga0068858_100135405 3300005842 Bacteria 2311
45 Ga0068860_100050810 3300005843 Bacteria 3946
46 Ga0068862_100018892 3300005844 Bacteria 5744
47 Ga0068862_100072233 3300005844 Bacteria 2980
48 Ga0081540_1000730 3300005983 Bacteria 30273
49 Ga0075364_10018005 3300006051 Bacteria 4418
50 Ga0070715_10004019 3300006163 Bacteria 4770
51 Ga0075362_10008916 3300006177 Bacteria 3856
52 Ga0068865_100052202 3300006881 Bacteria 2833
53 Ga0097620_100027987 3300006931 Bacteria 5651
54 Ga0097620_100031719 3300006931 Bacteria 5307
55 Ga0111539_10002197 3300009094 Bacteria 26053
56 Ga0105245_10038808 3300009098 Bacteria 4238
57 Ga0105247_10006817 3300009101 Bacteria 7041
58 Ga0105243_10028067 3300009148 Bacteria 4317
59 Ga0105243_10135712 3300009148 Bacteria 2093
60 Ga0105242_10065932 3300009176 Bacteria 2989
61 Ga0105249_10044754 3300009553 Bacteria 4025
62 Ga0105239_10095220 3300010375 Bacteria 3289
63 Ga0157369_10034436 3300013105 Bacteria 5559
64 Ga0157378_10039230 3300013297 Bacteria 4200
65 Ga0157375_10028808 3300013308 Bacteria 5212
66 Ga0163163_10026264 3300014325 Bacteria 5564
67 Ga0157380_10088290 3300014326 Bacteria 2551
68 Ga0157376_10203187 3300014969 Bacteria 1824
69 Ga0163161_10011692 3300017792 Bacteria 6091
70 Ga0209566_100013 3300025225 Bacteria 474033
71 Ga0209674_100001 3300025226 Bacteria 4013750
72 Ga0209563_100001 3300025230 Bacteria 4013775
73 Ga0207427_100121 3300025231 Bacteria 99954
74 Ga0209437_100492 3300025233 Bacteria 28898
75 Ga0209677_100001 3300025253 Bacteria 4013787
76 Ga0209233_1000014 3300025261 Bacteria 996641
77 Ga0209455_1001953 3300025272 Bacteria 8496
78 Ga0207710_10005441 3300025900 Bacteria 5482
79 Ga0207688_10027997 3300025901 Bacteria 3100
80 Ga0207685_10001425 3300025905 Bacteria 4999
81 Ga0207645_10023949 3300025907 Bacteria 3962
82 Ga0207707_10024880 3300025912 Bacteria 5237
83 Ga0207657_10015338 3300025919 Bacteria 7426
84 Ga0207657_10023235 3300025919 Bacteria 5778
85 Ga0207652_10143144 3300025921 Bacteria 2138
86 Ga0207659_10004861 3300025926 Bacteria 8143
87 Ga0207687_10008629 3300025927 Bacteria 6663
88 Ga0207706_10036444 3300025933 Bacteria 4369
89 Ga0207706_10180331 3300025933 Bacteria 1855
90 Ga0207704_10033399 3300025938 Bacteria 2925
91 Ga0207689_10004771 3300025942 Bacteria 12227
92 Ga0207679_10002458 3300025945 Bacteria 11402
93 Ga0207667_10142511 3300025949 Bacteria 2468
94 Ga0207677_10001847 3300026023 Bacteria 11191
95 Ga0207648_10040317 3300026089 Bacteria 4104
96 Ga0207674_10013729 3300026116 Bacteria 8966
97 Ga0207674_10037810 3300026116 Bacteria 5015
98 Ga0207675_100004702 3300026118 Bacteria 13139
99 Ga0207675_100061036 3300026118 Bacteria 3520
100 Ga0207683_10000802 3300026121 Bacteria 28724
101 Ga0207683_10110833 3300026121 Bacteria 2457
102 Ga0207698_10011443 3300026142 Bacteria 5755
103 Ga0207428_10026821 3300027907 Bacteria 4801
104 Ga0268266_10016011 3300028379 Bacteria 6413
105 Ga0268265_10092375 3300028380 Bacteria 2422
106 Ga0307517_10051636 3300028786 Bacteria 4144
107 Ga0307513_10005486 3300031456 Bacteria 16744
108 Ga0316575_10006065 3300031665 Bacteria 4330
109 Ga0316579_10017353 3300031691 Bacteria 3155
110 Ga0316578_10017088 3300031728 Bacteria 3942
111 Ga0307412_10020251 3300031911 Bacteria 4046
112 Ga0307416_100015850 3300032002 Bacteria 5220
113 Ga0307416_100036275 3300032002 Bacteria 3779
114 Ga0316582_0006639 3300036647 Bacteria 6098
115 Ga0395900_0132543 3300037418 Bacteria 2553
116 Ga0395901_0174147 3300038443 Bacteria 2257
117 Ga0436365_0688386 3300039437 Bacteria 4302
118 Ga0466965_0014315 3300044683 Bacteria 3752
119 Ga0466961_0034484 3300044693 Bacteria 3249
120 Ga0466961_0054456 3300044693 Bacteria 2551
121 Ga0466970_0006797 3300044765 Bacteria 5726
122 Ga0466970_0018248 3300044765 Bacteria 3629
123 Ga0466958_0042902 3300045836 Bacteria 2723
124 Ga0466967_0010434 3300045976 Bacteria 6971
125 Ga0466967_0023674 3300045976 Bacteria 5037
126 Ga0495628_0076687 3300046516 Bacteria 2601
127 Ga0495674_0027412 3300047319 Bacteria 5207
128 Ga0496102_0000094 3300048905 Bacteria 125159
129 Ga0496102_0066012 3300048905 Bacteria 3317
130 Ga0496103_0000042 3300048906 Bacteria 168701
131 Ga0496103_0019204 3300048906 Bacteria 4104
132 Ga0496105_0035361 3300048908 Bacteria 4111
133 Ga0496105_0043219 3300048908 Bacteria 3716
134 Ga0496106_0097190 3300048909 Bacteria 2280
135 Ga0496107_0027814 3300048910 Bacteria 4017
136 Ga0496108_0009679 3300048911 Bacteria 7811
137 Ga0496109_0004320 3300048912 Bacteria 11868
138 Ga0496110_0039880 3300048913 Bacteria 4091
139 Ga0496111_0026017 3300048914 Bacteria 4129
140 Ga0496113_0015289 3300048916 Bacteria 5271
141 Ga0496114_0005330 3300048917 Bacteria 10051
142 Ga0496114_0014595 3300048917 Bacteria 6311
143 Ga0496114_0019756 3300048917 Bacteria 5461
144 Ga0496114_0036259 3300048917 Bacteria 4076
145 Ga0496117_0018847 3300048920 Bacteria 5694
146 Ga0496118_0017194 3300048921 Bacteria 6596
147 Ga0501031_0000816 3300049568 Bacteria 18726
148 Ga0501031_0007233 3300049568 Bacteria 7244
149 Ga0501034_0069742 3300049571 Bacteria 3526
150 Ga0501036_0081676 3300049572 Bacteria 2731
151 Ga0501036_0082945 3300049572 Bacteria 2709
152 Ga0501036_0107491 3300049572 Bacteria 2359
153 Ga0501038_0000215 3300049574 Bacteria 49658
154 Ga0501038_0071686 3300049574 Bacteria 2938
155 Ga0501038_0085209 3300049574 Bacteria 2658
156 Ga0501039_0028301 3300049575 Bacteria 4313
157 Ga0501040_0007528 3300049576 Bacteria 7040
158 Ga0501041_0007711 3300049577 Bacteria 6317
159 Ga0501042_0020560 3300049578 Bacteria 4596
160 Ga0501042_0064900 3300049578 Bacteria 2609
161 Ga0501043_0008299 3300049579 Bacteria 8178
162 Ga0501043_0032147 3300049579 Bacteria 4124
163 Ga0501046_0037838 3300049580 Bacteria 3876
164 Ga0501047_0008661 3300049581 Bacteria 9608
165 Ga0501047_0056567 3300049581 Bacteria 3793
166 Ga0501048_0000334 3300049582 Bacteria 32432
167 Ga0501048_0020483 3300049582 Bacteria 4846
168 Ga0501048_0049362 3300049582 Bacteria 2999
169 Ga0501067_0002882 3300049583 Bacteria 9461
170 Ga0501067_0017565 3300049583 Bacteria 3959
171 Ga0501068_0092501 3300049584 Bacteria 1867
172 Ga0501069_0064641 3300049585 Bacteria 2045
173 Ga0501070_0007914 3300049586 Bacteria 9001
174 Ga0501071_0052855 3300049587 Bacteria 2929
175 Ga0501073_0005105 3300049589 Bacteria 9845
176 Ga0501073_0104245 3300049589 Bacteria 1969
177 Ga0501074_0001226 3300049590 Bacteria 16918
178 Ga0501074_0005485 3300049590 Bacteria 9126
179 Ga0501074_0007125 3300049590 Bacteria 8081
180 Ga0501075_0009260 3300049591 Bacteria 6887
181 Ga0501076_0008277 3300049592 Bacteria 7617
182 Ga0501077_0010371 3300049593 Bacteria 5798
183 Ga0501077_0013743 3300049593 Bacteria 5076
184 Ga0501077_0044950 3300049593 Bacteria 2805
185 Ga0501079_0020549 3300049741 Bacteria 5048
186 Ga0501079_0088573 3300049741 Bacteria 2397
187 Ga0501080_0017993 3300049742 Bacteria 6542
188 Ga0501081_0011685 3300049743 Bacteria 5747
189 Ga0501081_0024912 3300049743 Bacteria 4022
190 Ga0501083_0037095 3300049744 Bacteria 3321
191 Ga0501035_0003835 3300049822 Bacteria 14328
192 Ga0501035_0051247 3300049822 Bacteria 3696
193 Ga0501035_0073661 3300049822 Bacteria 3022
194 Ga0501035_0135951 3300049822 Bacteria 2140
195 Ga0501044_0014093 3300049823 Bacteria 8631
196 Ga0501044_0027427 3300049823 Bacteria 6019
197 Ga0501045_0001085 3300049824 Bacteria 17975
198 nmdc:mga00v17_7024_c1 3300050491 Bacteria 5994
199 nmdc:mga08y16_13698_c1 3300050511 Bacteria 8537
200 Ga0495619_0023742 3300053085 Bacteria 3931
201 Ga0500559_0021626 3300053136 Bacteria 2727
202 Ga0500645_010280 3300053730 Bacteria 3104
203 Ga0501084_0010410 3300054114 Bacteria 7690
204 Ga0501084_0105131 3300054114 Bacteria 2371
205 Ga0501082_0010871 3300060353 Bacteria 7836
206 Ga0530510_0007256 3300061734 Bacteria 7710
207 Ga0530510_0039788 3300061734 Bacteria 3393

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025933 Ga0207706_10180331 Ga0207706_101803312 475
2 3300049572 Ga0501036_0081676 Ga0501036_0081676_55_1794 528
3 3300049574 Ga0501038_0071686 Ga0501038_0071686_16_1755 528
4 3300049575 Ga0501039_0028301 Ga0501039_0028301_351_2090 528
5 3300049577 Ga0501041_0007711 Ga0501041_0007711_1266_3005 528
6 3300049578 Ga0501042_0020560 Ga0501042_0020560_1264_3003 528
7 3300049582 Ga0501048_0049362 Ga0501048_0049362_703_2442 528
8 3300049589 Ga0501073_0104245 Ga0501073_0104245_175_1914 528
9 3300049741 Ga0501079_0088573 Ga0501079_0088573_335_2074 528
10 3300049822 Ga0501035_0135951 Ga0501035_0135951_78_1817 528
11 3300054114 Ga0501084_0105131 Ga0501084_0105131_319_2058 528
12 3300049578 Ga0501042_0064900 Ga0501042_0064900_19_1668 530
13 3300049584 Ga0501068_0092501 Ga0501068_0092501_54_1793 530
14 3300049593 Ga0501077_0044950 Ga0501077_0044950_781_2520 530
15 3300049743 Ga0501081_0024912 Ga0501081_0024912_856_2595 530
16 3300061734 Ga0530510_0039788 Ga0530510_0039788_1203_2942 530
17 3300025949 Ga0207667_10142511 Ga0207667_101425111 531
18 3300036647 Ga0316582_0006639 Ga0316582_0006639_561_2294 531
19 3300048908 Ga0496105_0035361 Ga0496105_0035361_1491_3224 531
20 3300048917 Ga0496114_0005330 Ga0496114_0005330_2524_4257 531
21 3300014969 Ga0157376_10203187 Ga0157376_102031871 532
22 3300026089 Ga0207648_10040317 Ga0207648_100403172 532
23 iso_pu_bacteria 8054727385 8054727714 533
24 3300005329 Ga0070683_100068429 Ga0070683_1000684292 534
25 3300048917 Ga0496114_0036259 Ga0496114_0036259_1882_3615 537
26 3300049568 Ga0501031_0000816 Ga0501031_0000816_699_2432 537
27 3300049574 Ga0501038_0000215 Ga0501038_0000215_17559_19292 537
28 3300049579 Ga0501043_0008299 Ga0501043_0008299_3088_4821 537
29 3300049580 Ga0501046_0037838 Ga0501046_0037838_217_1950 537
30 3300049581 Ga0501047_0008661 Ga0501047_0008661_2534_4267 537
31 3300049582 Ga0501048_0000334 Ga0501048_0000334_7308_9041 537
32 3300049586 Ga0501070_0007914 Ga0501070_0007914_3964_5697 537
33 3300049822 Ga0501035_0003835 Ga0501035_0003835_3342_5075 537
34 3300049823 Ga0501044_0014093 Ga0501044_0014093_4139_5872 537
35 3300031911 Ga0307412_10020251 Ga0307412_100202512 539
36 3300032002 Ga0307416_100036275 Ga0307416_1000362752 539
37 3300005328 Ga0070676_10018958 Ga0070676_100189583 541
38 3300005466 Ga0070685_10034040 Ga0070685_100340402 541
39 3300005617 Ga0068859_100027989 Ga0068859_1000279892 541
40 3300006931 Ga0097620_100027987 Ga0097620_1000279872 541
41 3300005445 Ga0070708_100011017 Ga0070708_1000110174 542
42 3300005471 Ga0070698_100029944 Ga0070698_1000299444 542
43 3300005983 Ga0081540_1000730 Ga0081540_100073018 544
44 iso_pu_bacteria 2919523602 2919526568 545
45 3300049823 Ga0501044_0027427 Ga0501044_0027427_1444_3174 548
46 3300044683 Ga0466965_0014315 Ga0466965_0014315_1994_3697 549
47 3300044693 Ga0466961_0034484 Ga0466961_0034484_1457_3160 549
48 3300044693 Ga0466961_0054456 Ga0466961_0054456_459_2162 549
49 3300044765 Ga0466970_0006797 Ga0466970_0006797_1354_3057 549
50 3300044765 Ga0466970_0018248 Ga0466970_0018248_1875_3578 549
51 3300045836 Ga0466958_0042902 Ga0466958_0042902_424_2127 549
52 3300048920 Ga0496117_0018847 Ga0496117_0018847_2341_4044 549
53 3300050491 nmdc:mga00v17_7024_c1 nmdc:mga00v17_7024_c1_3885_5618 551
54 3300002772 JGI25164J39214_1001256 JGI25164J39214_10012565 552
55 3300003214 JGI25165J46597_1000014 JGI25165J46597_1000014202 552
56 3300025231 Ga0207427_100121 Ga0207427_10012191 552
57 3300025233 Ga0209437_100492 Ga0209437_10049226 552
58 3300025261 Ga0209233_1000014 Ga0209233_1000014610 552
59 3300045976 Ga0466967_0010434 Ga0466967_0010434_3471_5207 552
60 iso_pu_bacteria 2515154088 2515493793 554
61 iso_pu_bacteria 2515154137 2515755182 554
62 iso_pu_bacteria 2515154202 2516084013 554
63 iso_pu_bacteria 2515154203 2516087675 554
64 iso_pu_bacteria 2643221567 2643851492 554
65 iso_pu_bacteria 2643221624 2644137918 554
66 iso_pu_bacteria 2675903059 2676482830 554
67 iso_pu_bacteria 2739367653 2739604037 554
68 iso_pu_bacteria 2816332305 2817509769 554
69 iso_pu_bacteria 2831935698 2831940463 554
70 iso_pu_bacteria 2855670206 2855671622 554
71 iso_pu_bacteria 2855676851 2855679006 554
72 iso_pu_bacteria 2857288857 2857292317 554
73 iso_pu_bacteria 2857727296 2857729434 554
74 iso_pu_bacteria 2858848962 2858852011 554
75 iso_pu_bacteria 2858868258 2858875014 554
76 iso_pu_bacteria 2858882152 2858883526 554
77 iso_pu_bacteria 2858888857 2858890632 554
78 iso_pu_bacteria 2858895516 2858901261 554
79 iso_pu_bacteria 2858902515 2858907514 554
80 iso_pu_bacteria 2867312974 2867313212 554
81 iso_pu_bacteria 2867319477 2867324804 554
82 iso_pu_bacteria 2867507094 2867509449 554
83 iso_pu_bacteria 2869048445 2869052387 554
84 iso_pu_bacteria 2869061728 2869067339 554
85 iso_pu_bacteria 2869068681 2869070243 554
86 iso_pu_bacteria 2880489317 2880493628 554
87 iso_pu_bacteria 2880495981 2880498700 554
88 iso_pu_bacteria 2902582711 2902586250 554
89 iso_pu_bacteria 2929219909 2929220697 554
90 iso_pu_bacteria 2929226422 2929227276 554
91 iso_pu_bacteria 2996221748 2996227220 554
92 iso_pu_bacteria 8003830390 8003835683 554
93 iso_pu_bacteria 8054704163 8054706943 554
94 iso_pu_bacteria 8054734606 8054736029 554
95 iso_pu_bacteria 8055412473 8055415215 554
96 3300013105 Ga0157369_10034436 Ga0157369_100344362 555
97 iso_pu_bacteria 2844841374 2844844624 555
98 iso_pu_bacteria 2919055335 2919056599 555
99 iso_pu_bacteria 2928153084 2928155407 555
100 3300009098 Ga0105245_10038808 Ga0105245_100388082 556
101 3300009176 Ga0105242_10065932 Ga0105242_100659323 556
102 3300013297 Ga0157378_10039230 Ga0157378_100392304 556
103 3300049822 Ga0501035_0073661 Ga0501035_0073661_97_1830 556
104 3300005456 Ga0070678_100001181 Ga0070678_1000011812 557
105 3300026121 Ga0207683_10000802 Ga0207683_100008027 557
106 3300037418 Ga0395900_0132543 Ga0395900_0132543_562_2289 557
107 3300039437 Ga0436365_0688386 Ga0436365_0688386_1782_3512 557
108 3300046516 Ga0495628_0076687 Ga0495628_0076687_582_2312 557
109 3300047319 Ga0495674_0027412 Ga0495674_0027412_2605_4335 557
110 3300048905 Ga0496102_0066012 Ga0496102_0066012_421_2151 557
111 3300049581 Ga0501047_0056567 Ga0501047_0056567_527_2254 557
112 3300053085 Ga0495619_0023742 Ga0495619_0023742_902_2632 557
113 3300005327 Ga0070658_10022477 Ga0070658_100224774 558
114 3300005329 Ga0070683_100100188 Ga0070683_1001001882 558
115 3300005334 Ga0068869_100008538 Ga0068869_1000085382 558
116 3300005338 Ga0068868_100002984 Ga0068868_1000029846 558
117 3300005338 Ga0068868_100026574 Ga0068868_1000265743 558
118 3300005339 Ga0070660_100018592 Ga0070660_1000185923 558
119 3300005344 Ga0070661_100037665 Ga0070661_1000376652 558
120 3300005345 Ga0070692_10025342 Ga0070692_100253422 558
121 3300005347 Ga0070668_100005284 Ga0070668_1000052846 558
122 3300005356 Ga0070674_100023524 Ga0070674_1000235242 558
123 3300005366 Ga0070659_100002736 Ga0070659_1000027368 558
124 3300005436 Ga0070713_100046410 Ga0070713_1000464102 558
125 3300005457 Ga0070662_100039785 Ga0070662_1000397852 558
126 3300005458 Ga0070681_10020767 Ga0070681_100207676 558
127 3300005459 Ga0068867_100063189 Ga0068867_1000631892 558
128 3300005530 Ga0070679_100093972 Ga0070679_1000939724 558
129 3300005535 Ga0070684_100004615 Ga0070684_1000046154 558
130 3300005563 Ga0068855_100105858 Ga0068855_1001058583 558
131 3300005564 Ga0070664_100004589 Ga0070664_1000045895 558
132 3300005577 Ga0068857_100002582 Ga0068857_1000025823 558
133 3300005578 Ga0068854_100027084 Ga0068854_1000270842 558
134 3300005616 Ga0068852_100035205 Ga0068852_1000352053 558
135 3300005617 Ga0068859_100031719 Ga0068859_1000317194 558
136 3300005719 Ga0068861_100009346 Ga0068861_1000093465 558
137 3300005842 Ga0068858_100135405 Ga0068858_1001354052 558
138 3300005843 Ga0068860_100050810 Ga0068860_1000508103 558
139 3300005844 Ga0068862_100018892 Ga0068862_1000188923 558
140 3300005844 Ga0068862_100072233 Ga0068862_1000722332 558
141 3300006051 Ga0075364_10018005 Ga0075364_100180052 558
142 3300006163 Ga0070715_10004019 Ga0070715_100040193 558
143 3300006177 Ga0075362_10008916 Ga0075362_100089163 558
144 3300006881 Ga0068865_100052202 Ga0068865_1000522022 558
145 3300006931 Ga0097620_100031719 Ga0097620_1000317193 558
146 3300009094 Ga0111539_10002197 Ga0111539_1000219723 558
147 3300009101 Ga0105247_10006817 Ga0105247_100068177 558
148 3300009148 Ga0105243_10028067 Ga0105243_100280673 558
149 3300009148 Ga0105243_10135712 Ga0105243_101357122 558
150 3300009553 Ga0105249_10044754 Ga0105249_100447543 558
151 3300010375 Ga0105239_10095220 Ga0105239_100952202 558
152 3300014326 Ga0157380_10088290 Ga0157380_100882902 558
153 3300025272 Ga0209455_1001953 Ga0209455_10019535 558
154 3300025900 Ga0207710_10005441 Ga0207710_100054413 558
155 3300025901 Ga0207688_10027997 Ga0207688_100279973 558
156 3300025905 Ga0207685_10001425 Ga0207685_100014253 558
157 3300025907 Ga0207645_10023949 Ga0207645_100239493 558
158 3300025912 Ga0207707_10024880 Ga0207707_100248804 558
159 3300025919 Ga0207657_10015338 Ga0207657_100153384 558
160 3300025919 Ga0207657_10023235 Ga0207657_100232353 558
161 3300025921 Ga0207652_10143144 Ga0207652_101431442 558
162 3300025926 Ga0207659_10004861 Ga0207659_100048614 558
163 3300025927 Ga0207687_10008629 Ga0207687_100086295 558
164 3300025933 Ga0207706_10036444 Ga0207706_100364442 558
165 3300025938 Ga0207704_10033399 Ga0207704_100333992 558
166 3300025942 Ga0207689_10004771 Ga0207689_1000477112 558
167 3300025945 Ga0207679_10002458 Ga0207679_100024587 558
168 3300026023 Ga0207677_10001847 Ga0207677_100018477 558
169 3300026116 Ga0207674_10013729 Ga0207674_100137292 558
170 3300026116 Ga0207674_10037810 Ga0207674_100378102 558
171 3300026118 Ga0207675_100004702 Ga0207675_10000470211 558
172 3300026121 Ga0207683_10110833 Ga0207683_101108332 558
173 3300027907 Ga0207428_10026821 Ga0207428_100268212 558
174 3300028379 Ga0268266_10016011 Ga0268266_100160114 558
175 3300028380 Ga0268265_10092375 Ga0268265_100923752 558
176 3300028786 Ga0307517_10051636 Ga0307517_100516362 558
177 3300031456 Ga0307513_10005486 Ga0307513_1000548611 558
178 3300031665 Ga0316575_10006065 Ga0316575_100060651 558
179 3300031691 Ga0316579_10017353 Ga0316579_100173532 558
180 3300031728 Ga0316578_10017088 Ga0316578_100170882 558
181 3300032002 Ga0307416_100015850 Ga0307416_1000158503 558
182 3300038443 Ga0395901_0174147 Ga0395901_0174147_374_2107 558
183 3300045976 Ga0466967_0023674 Ga0466967_0023674_2621_4357 558
184 3300048905 Ga0496102_0000094 Ga0496102_0000094_88705_90438 558
185 3300048906 Ga0496103_0000042 Ga0496103_0000042_134935_136668 558
186 3300048906 Ga0496103_0019204 Ga0496103_0019204_1452_3188 558
187 3300048908 Ga0496105_0043219 Ga0496105_0043219_805_2538 558
188 3300048909 Ga0496106_0097190 Ga0496106_0097190_17_1750 558
189 3300048910 Ga0496107_0027814 Ga0496107_0027814_1108_2841 558
190 3300048911 Ga0496108_0009679 Ga0496108_0009679_2341_4074 558
191 3300048912 Ga0496109_0004320 Ga0496109_0004320_1644_3377 558
192 3300048913 Ga0496110_0039880 Ga0496110_0039880_659_2392 558
193 3300048914 Ga0496111_0026017 Ga0496111_0026017_250_1983 558
194 3300048916 Ga0496113_0015289 Ga0496113_0015289_278_2011 558
195 3300048917 Ga0496114_0014595 Ga0496114_0014595_3001_4737 558
196 3300048917 Ga0496114_0019756 Ga0496114_0019756_1992_3728 558
197 3300048921 Ga0496118_0017194 Ga0496118_0017194_3362_5095 558
198 3300049571 Ga0501034_0069742 Ga0501034_0069742_989_2722 558
199 3300049572 Ga0501036_0107491 Ga0501036_0107491_114_1847 558
200 3300049574 Ga0501038_0085209 Ga0501038_0085209_189_1922 558
201 3300049583 Ga0501067_0002882 Ga0501067_0002882_277_2010 558
202 3300049583 Ga0501067_0017565 Ga0501067_0017565_991_2724 558
203 3300049587 Ga0501071_0052855 Ga0501071_0052855_1062_2795 558
204 3300049589 Ga0501073_0005105 Ga0501073_0005105_6752_8485 558
205 3300049590 Ga0501074_0001226 Ga0501074_0001226_1024_2757 558
206 3300049590 Ga0501074_0005485 Ga0501074_0005485_6630_8363 558
207 3300049593 Ga0501077_0010371 Ga0501077_0010371_968_2701 558
208 3300049742 Ga0501080_0017993 Ga0501080_0017993_171_1904 558
209 3300049744 Ga0501083_0037095 Ga0501083_0037095_961_2694 558
210 3300050511 nmdc:mga08y16_13698_c1 nmdc:mga08y16_13698_c1_6520_8253 558
211 3300053136 Ga0500559_0021626 Ga0500559_0021626_95_1828 558
212 3300001979 JGI24740J21852_10008177 JGI24740J21852_100081772 559
213 3300001989 JGI24739J22299_10006281 JGI24739J22299_100062812 559
214 3300002067 JGI24735J21928_10000927 JGI24735J21928_100009272 559
215 3300003578 Ga0006562J51391_1205203 Ga0006562J51391_12052032 559
216 3300003578 Ga0006562J51391_1205204 Ga0006562J51391_12052042 559
217 3300003752 Ga0055539_1000006 Ga0055539_1000006409 559
218 3300003756 Ga0055533_1000002 Ga0055533_1000002493 559
219 3300003759 Ga0055525_1000022 Ga0055525_1000022288 559
220 3300003841 Ga0055541_1004300 Ga0055541_10043002 559
221 3300005616 Ga0068852_100017327 Ga0068852_1000173272 559
222 3300013308 Ga0157375_10028808 Ga0157375_100288082 559
223 3300014325 Ga0163163_10026264 Ga0163163_100262642 559
224 3300017792 Ga0163161_10011692 Ga0163161_100116922 559
225 3300025225 Ga0209566_100013 Ga0209566_100013295 559
226 3300025226 Ga0209674_100001 Ga0209674_1000013070 559
227 3300025230 Ga0209563_100001 Ga0209563_1000013070 559
228 3300025253 Ga0209677_100001 Ga0209677_1000013070 559
229 3300026118 Ga0207675_100061036 Ga0207675_1000610362 559
230 3300026142 Ga0207698_10011443 Ga0207698_100114432 559
231 3300049568 Ga0501031_0007233 Ga0501031_0007233_5398_7140 559
232 3300049572 Ga0501036_0082945 Ga0501036_0082945_934_2676 559
233 3300049576 Ga0501040_0007528 Ga0501040_0007528_603_2345 559
234 3300049579 Ga0501043_0032147 Ga0501043_0032147_924_2666 559
235 3300049582 Ga0501048_0020483 Ga0501048_0020483_19_1761 559
236 3300049585 Ga0501069_0064641 Ga0501069_0064641_173_1915 559
237 3300049590 Ga0501074_0007125 Ga0501074_0007125_4902_6644 559
238 3300049591 Ga0501075_0009260 Ga0501075_0009260_2105_3847 559
239 3300049592 Ga0501076_0008277 Ga0501076_0008277_2821_4563 559
240 3300049593 Ga0501077_0013743 Ga0501077_0013743_472_2214 559
241 3300049741 Ga0501079_0020549 Ga0501079_0020549_3198_4940 559
242 3300049743 Ga0501081_0011685 Ga0501081_0011685_2674_4416 559
243 3300049822 Ga0501035_0051247 Ga0501035_0051247_1813_3555 559
244 3300049824 Ga0501045_0001085 Ga0501045_0001085_16094_17836 559
245 3300053730 Ga0500645_010280 Ga0500645_010280_164_1900 559
246 3300054114 Ga0501084_0010410 Ga0501084_0010410_2921_4663 559
247 3300060353 Ga0501082_0010871 Ga0501082_0010871_2944_4686 559
248 3300061734 Ga0530510_0007256 Ga0530510_0007256_2973_4715 559

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00664

ABC_membrane

ABC transporter transmembrane region

27

298

0.99

PF00005

ABC_tran

ABC transporter

361

510

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vx4-assembly1.cif.gz_A crystal structure of the nucleotide-binding domain of s. mutans coma, a bifunctional atp-binding cassette transporter involved in the quorum-sensing pathway 0.9511 314 549
1jj7-assembly1.cif.gz_A crystal structure of the c-terminal atpase domain of human tap1 0.9475 314 551
2ixe-assembly1.cif.gz_A crystal structure of the atpase domain of tap1 with atp (d645n mutant) 0.947 310 551
4k8o-assembly1.cif.gz_A-2 crystal structure of the atpase domain of tap1 with atp (d645n, d651a mutant) 0.9454 310 551
2fgk-assembly2.cif.gz_B crystal structure of the abc-cassette e631q mutant of hlyb with bound atp 0.9426 317 549
ID Description Score Start End Superfamily
6qv0C02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9649 311 553 3.40.50.300
af_P9WQJ7_327_576_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9615 316 556 3.40.50.300
af_Q4CVK2_1_214_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9555 351 556 3.40.50.300
af_P9WQJ1_326_578_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9536 308 559 3.40.50.300
af_P23886_333_572_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9522 316 549 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A5C7QJQ5-F1-model_v4 ATP-binding cassette domain-containing protein 0.9554 368 532 GO:0005524
GO:0016887
GO:0042626
AF-A0A498EKE0-F1-model_v4 ATP-binding cassette domain-containing protein 0.9487 416 557 GO:0005524
GO:0015421
GO:0016887
GO:0090374
AF-A0A7X6ENN9-F1-model_v4 deleted 0.9404 388 478
AF-A0A5C7QJQ5-F1-model_v4 ATP-binding cassette domain-containing protein 0.939 368 532 GO:0005524
GO:0016887
GO:0042626
AF-A0A0R2UXD5-F1-model_v4 ABC transporter domain-containing protein 0.9384 320 557 GO:0005524
GO:0016887
GO:0042626

Feature Viewer

pLDDT pTM Quality
74.34 0.52 Medium
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Predicted Structure (AlphaFold2)

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