F359727

General Info

Members Datasets Scaffolds Average Seq Length
248 136 243 830

Family's Representative Sequence

Representative Sequence 3300005539|Ga0068853_100024215|Ga0068853_1000242153
Length 886
Sequence MENNDNLNEESQPLEGGDLNNRGRIIPVNIEEQMKTSYIDYSMSVIVGRALPDVRDGLKPVHRRVLYGMSELGNTSNKPYKKSARIVGEVMGKYHPHGDSAIYQTMVRMAQDWAMRYTMIDGQGNFGSEDGDPPAAMRYTEVRMQKFAEAMLEDIEKETVDYQLNFDDSLKEPMVLPTRVPQLLVNGSSGIAVGMATNMMPHNLSEVVDGCIAYIDNKEISCEELIQYVKGPDFPTGGVIYGFEGVKEGLLTGRGRVVLRGKVDIEITKTGREKIIITQVPYQVNRDMLTAKIGELINEKQIEGVSDVNNESNNKEGTRIVIDLKKDAVAQVVINHLYKQTELQTSYGINNVALVRGRPKVLNLKELISEFIMFRHEVVVRRTQYELRKAEERAHILEGYIIALDNLDAVIKLIRESSTPNIAQEGLMTNFGMSEIQAKAVLELRLQRLTGMEIDKIRAEHAEIMKLIEHLKLILANEDMRYDIIKKELLEVKEKFGDERKSEIVYVGDEINMLDLIEDEDVVVTISHLGYIKRTSAAEYRQQRRGGXXAKGSSTRQEDYIEKLFVASTHHTLLFFTEMGRCFWLKVYEIPEGDKTSKGRALQNMIMIPPDDKVRAIIDVKNFDDEEYVKNHYIVLCTKQGIINKSRLKDFSRPRTNGINAITIKDGDQLLEAKLTDGNCEIMMAVKSGRAIRFPEQKVRPTGRGGIGVSGIDVDDATDEVVGMICVNVEDKTKTVLVVSANGYGKRTFLDDPETGEANYRITNRGGKGVKTISVTAKTGSLVGLLAVTEAEDLMITCVSGITIRMPVNQISEQGRATQGVKLIRVDEGDEIAAITQLDEKEVEEAILLDAEGNAIVDTTATEEAESTGTSAEDNDAAEPEEPADS

Samples

Sample ID Description Type Environment
1 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
2 2818991444 Filimonas endophytica 3197 Isolate Unclassified
3 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
4 2914759650 Rhizosphaericola mali Isolate Rhizosphere
5 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
62 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
63 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
86 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
87 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
88 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
89 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
90 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
91 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
94 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
95 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
96 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
97 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
98 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
99 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
100 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
101 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
102 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
103 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
109 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
110 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
111 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
114 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
118 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
119 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
120 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
121 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
122 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
129 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
130 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
131 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
132 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
133 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
134 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
135 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
136 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.98
Metatranscriptomes 0
Isolates 2.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.24
Nodule 0
Rhizoplane 0
Rhizosphere 89.52
Stem 0
Stem Tuber 0
Unclassified 5.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10001836 3300003203 Bacteria 9965
2 rootH2_10000316 3300003320 Bacteria 8604
3 rootH2_10011844 3300003320 Bacteria 47214
4 JGI25160J50197_1000790 3300003354 Bacteria 17009
5 Ga0070683_100001916 3300005329 Bacteria 16281
6 Ga0070683_100017270 3300005329 Bacteria 6376
7 Ga0070690_100033839 3300005330 Bacteria 3201
8 Ga0070666_10000127 3300005335 Bacteria 53362
9 Ga0070660_100016601 3300005339 Bacteria 5347
10 Ga0070671_100010199 3300005355 Bacteria 7541
11 Ga0070674_100019185 3300005356 Bacteria 4341
12 Ga0070673_100012487 3300005364 Bacteria 5832
13 Ga0070659_100005484 3300005366 Bacteria 9115
14 Ga0070659_100008528 3300005366 Bacteria 7490
15 Ga0070713_100020219 3300005436 Bacteria 5099
16 Ga0070679_100020127 3300005530 Bacteria 6502
17 Ga0070684_100031667 3300005535 Bacteria 4504
18 Ga0068853_100024215 3300005539 Bacteria 5088
19 Ga0068853_100029533 3300005539 Bacteria 4623
20 Ga0070665_100000009 3300005548 Bacteria 562640
21 Ga0068855_100000420 3300005563 Bacteria 52301
22 Ga0068855_100009367 3300005563 Bacteria 11826
23 Ga0068855_100063664 3300005563 Bacteria 4303
24 Ga0070664_100025954 3300005564 Bacteria 4857
25 Ga0068856_100033951 3300005614 Bacteria 4996
26 Ga0068856_100052162 3300005614 Bacteria 4033
27 Ga0070702_100005884 3300005615 Bacteria 5757
28 Ga0068852_100003236 3300005616 Bacteria 11371
29 Ga0068859_100000098 3300005617 Bacteria 80555
30 Ga0068859_100017167 3300005617 Bacteria 7269
31 Ga0068859_100020639 3300005617 Bacteria 6611
32 Ga0068864_100072116 3300005618 Bacteria 3009
33 Ga0068863_100014852 3300005841 Bacteria 7484
34 Ga0068858_100009184 3300005842 Bacteria 9447
35 Ga0068860_100000103 3300005843 Bacteria 139076
36 Ga0068860_100001554 3300005843 Bacteria 24721
37 Ga0068860_100008897 3300005843 Bacteria 10004
38 Ga0068860_100016712 3300005843 Bacteria 7155
39 Ga0081539_10000534 3300005985 Bacteria 78990
40 Ga0070717_10000003 3300006028 Bacteria 370103
41 Ga0075366_10003936 3300006195 Bacteria 7921
42 Ga0097621_100000122 3300006237 Bacteria 44726
43 Ga0097621_100028895 3300006237 Bacteria 4375
44 Ga0068871_100006679 3300006358 Bacteria 8185
45 Ga0068871_100026969 3300006358 Bacteria 4488
46 Ga0075431_100017748 3300006847 Bacteria 7235
47 Ga0097620_100000098 3300006931 Bacteria 80555
48 Ga0097620_100017167 3300006931 Bacteria 7269
49 Ga0097620_100020638 3300006931 Bacteria 6611
50 Ga0105240_10000194 3300009093 Bacteria 123394
51 Ga0105240_10001038 3300009093 Bacteria 49382
52 Ga0105240_10002800 3300009093 Bacteria 27570
53 Ga0105240_10004646 3300009093 Bacteria 20789
54 Ga0105240_10011235 3300009093 Bacteria 12485
55 Ga0105240_10087304 3300009093 Bacteria 3820
56 Ga0105247_10012511 3300009101 Bacteria 5098
57 Ga0114129_10007580 3300009147 Bacteria 15451
58 Ga0105241_10027357 3300009174 Bacteria 4247
59 Ga0105237_10001232 3300009545 Bacteria 34099
60 Ga0105237_10003853 3300009545 Bacteria 17642
61 Ga0105249_10017223 3300009553 Bacteria 6414
62 Ga0105239_10000246 3300010375 Bacteria 80752
63 Ga0105239_10001322 3300010375 Bacteria 33365
64 Ga0105239_10003948 3300010375 Bacteria 17968
65 Ga0105239_10007727 3300010375 Bacteria 12308
66 Ga0105239_10009108 3300010375 Bacteria 11231
67 Ga0105239_10039964 3300010375 Bacteria 5139
68 Ga0157373_10008520 3300013100 Bacteria 7617
69 Ga0157370_10003477 3300013104 Bacteria 18480
70 Ga0157370_10006521 3300013104 Bacteria 12851
71 Ga0157370_10024340 3300013104 Bacteria 5996
72 Ga0157370_10027589 3300013104 Bacteria 5599
73 Ga0157369_10022360 3300013105 Bacteria 7057
74 Ga0157369_10031495 3300013105 Bacteria 5838
75 Ga0157369_10043884 3300013105 Bacteria 4870
76 Ga0157374_10000002 3300013296 Bacteria 1054226
77 Ga0157374_10012146 3300013296 Bacteria 7481
78 Ga0157378_10007640 3300013297 Bacteria 9437
79 Ga0157378_10040128 3300013297 Bacteria 4151
80 Ga0163162_10000269 3300013306 Bacteria 47344
81 Ga0163162_10000376 3300013306 Bacteria 40621
82 Ga0163162_10000511 3300013306 Bacteria 35959
83 Ga0163162_10000703 3300013306 Bacteria 30932
84 Ga0163162_10066041 3300013306 Bacteria 3666
85 Ga0157372_10001229 3300013307 Bacteria 27743
86 Ga0157372_10041651 3300013307 Bacteria 5078
87 Ga0157372_10049606 3300013307 Bacteria 4668
88 Ga0157372_10067057 3300013307 Bacteria 4032
89 Ga0157375_10000162 3300013308 Bacteria 63098
90 Ga0163163_10005940 3300014325 Bacteria 10625
91 Ga0157380_10011227 3300014326 Bacteria 6467
92 Ga0157377_10015748 3300014745 Bacteria 3875
93 Ga0157377_10024953 3300014745 Bacteria 3183
94 Ga0157376_10001661 3300014969 Bacteria 14779
95 Ga0157376_10074836 3300014969 Bacteria 2888
96 Ga0182005_1000126 3300015265 Bacteria 53914
97 Ga0163161_10001382 3300017792 Bacteria 17961
98 Ga0213876_10003920 3300021384 Bacteria 8407
99 Ga0209436_103022 3300025208 Bacteria 4670
100 Ga0207426_1000019 3300025302 Bacteria 558579
101 Ga0207680_10000408 3300025903 Bacteria 20509
102 Ga0207647_10001562 3300025904 Bacteria 17603
103 Ga0207643_10001857 3300025908 Bacteria 11679
104 Ga0207695_10000016 3300025913 Bacteria 771991
105 Ga0207695_10000060 3300025913 Bacteria 360217
106 Ga0207695_10000280 3300025913 Bacteria 126470
107 Ga0207695_10006326 3300025913 Bacteria 15404
108 Ga0207695_10042237 3300025913 Bacteria 4873
109 Ga0207671_10002175 3300025914 Bacteria 21298
110 Ga0207671_10003713 3300025914 Bacteria 15043
111 Ga0207652_10035881 3300025921 Bacteria 4188
112 Ga0207644_10026974 3300025931 Bacteria 3965
113 Ga0207644_10047507 3300025931 Bacteria 3064
114 Ga0207669_10013533 3300025937 Bacteria 4055
115 Ga0207691_10021910 3300025940 Bacteria 6029
116 Ga0207689_10000357 3300025942 Bacteria 42953
117 Ga0207661_10021329 3300025944 Bacteria 4852
118 Ga0207667_10000241 3300025949 Bacteria 76753
119 Ga0207667_10002377 3300025949 Bacteria 23543
120 Ga0207667_10018707 3300025949 Bacteria 7762
121 Ga0207667_10042363 3300025949 Bacteria 4840
122 Ga0207667_10067199 3300025949 Bacteria 3735
123 Ga0207651_10015865 3300025960 Bacteria 4393
124 Ga0207712_10004048 3300025961 Bacteria 9262
125 Ga0207712_10005588 3300025961 Bacteria 7927
126 Ga0207703_10016099 3300026035 Bacteria 5830
127 Ga0207639_10062729 3300026041 Bacteria 2875
128 Ga0207641_10000840 3300026088 Bacteria 32683
129 Ga0207641_10017308 3300026088 Bacteria 5900
130 Ga0207648_10031470 3300026089 Bacteria 4691
131 Ga0207674_10022225 3300026116 Bacteria 6816
132 Ga0207674_10034192 3300026116 Bacteria 5317
133 Ga0207674_10072106 3300026116 Bacteria 3470
134 Ga0207698_10005303 3300026142 Bacteria 7942
135 Ga0207698_10006222 3300026142 Bacteria 7430
136 Ga0268266_10000105 3300028379 Bacteria 176691
137 Ga0268264_10000013 3300028381 Bacteria 513859
138 Ga0268264_10002026 3300028381 Bacteria 18162
139 Ga0268264_10008453 3300028381 Bacteria 8561
140 Ga0268264_10061627 3300028381 Bacteria 3147
141 Ga0265337_1002510 3300028556 Bacteria 8369
142 Ga0265319_1000022 3300028563 Bacteria 150752
143 Ga0265319_1000745 3300028563 Bacteria 21216
144 Ga0265319_1002315 3300028563 Bacteria 10511
145 Ga0265319_1010372 3300028563 Bacteria 3892
146 Ga0265319_1013472 3300028563 Bacteria 3248
147 Ga0265318_10000401 3300028577 Bacteria 33792
148 Ga0265318_10000402 3300028577 Bacteria 33726
149 Ga0265318_10007914 3300028577 Bacteria 4771
150 Ga0265318_10008393 3300028577 Bacteria 4602
151 Ga0265323_10002345 3300028653 Bacteria 8739
152 Ga0265322_10002628 3300028654 Bacteria 5511
153 Ga0265336_10001537 3300028666 Bacteria 10368
154 Ga0307515_10000001 3300028794 Bacteria 4259510
155 Ga0307515_10005512 3300028794 Bacteria 25617
156 Ga0265338_10000796 3300028800 Bacteria 53360
157 Ga0265338_10004411 3300028800 Bacteria 19028
158 Ga0265338_10008368 3300028800 Bacteria 12568
159 Ga0265338_10009277 3300028800 Bacteria 11770
160 Ga0265320_10001063 3300031240 Bacteria 20332
161 Ga0265320_10013806 3300031240 Bacteria 4629
162 Ga0265320_10019859 3300031240 Bacteria 3660
163 Ga0265340_10007769 3300031247 Bacteria 5816
164 Ga0265331_10005587 3300031250 Bacteria 7571
165 Ga0265327_10000032 3300031251 Bacteria 318763
166 Ga0265327_10000644 3300031251 Bacteria 56620
167 Ga0265327_10008500 3300031251 Bacteria 7634
168 Ga0265316_10001718 3300031344 Bacteria 23247
169 Ga0265316_10003388 3300031344 Bacteria 16141
170 Ga0265316_10003606 3300031344 Bacteria 15609
171 Ga0265316_10034434 3300031344 Bacteria 4114
172 Ga0265313_10003752 3300031595 Bacteria 12072
173 Ga0265313_10019215 3300031595 Bacteria 3811
174 Ga0307508_10000354 3300031616 Bacteria 55733
175 Ga0265314_10002055 3300031711 Bacteria 21256
176 Ga0265314_10006551 3300031711 Bacteria 10271
177 Ga0316578_10004711 3300031728 Bacteria 6487
178 Ga0307510_10000555 3300033180 Bacteria 37450
179 Ga0316584_0004130 3300036712 Bacteria 9580
180 Ga0395899_0046291 3300037312 Bacteria 3240
181 Ga0395901_0002281 3300038443 Bacteria 19556
182 Ga0436365_0086950 3300039437 Bacteria 6265
183 Ga0436365_1250123 3300039437 Bacteria 6547
184 Ga0451577_0000469 3300042876 Bacteria 69754
185 Ga0451577_0005689 3300042876 Bacteria 12649
186 Ga0451577_0044957 3300042876 Bacteria 3952
187 Ga0466969_0000667 3300044656 Bacteria 18662
188 Ga0466972_0000030 3300044658 Bacteria 161580
189 Ga0466972_0012588 3300044658 Bacteria 4251
190 Ga0453683_0000621 3300044673 Bacteria 38697
191 Ga0466964_0008316 3300044706 Bacteria 3894
192 Ga0453684_0000091 3300044712 Bacteria 387720
193 Ga0453684_0000093 3300044712 Bacteria 384050
194 Ga0453684_0004075 3300044712 Bacteria 31734
195 Ga0453684_0004764 3300044712 Bacteria 27993
196 Ga0453684_0023928 3300044712 Bacteria 8957
197 Ga0453684_0026348 3300044712 Bacteria 8403
198 Ga0453684_0027139 3300044712 Bacteria 8228
199 Ga0453684_0030274 3300044712 Bacteria 7652
200 Ga0453684_0031453 3300044712 Bacteria 7458
201 Ga0453684_0034433 3300044712 Bacteria 7030
202 Ga0453684_0035783 3300044712 Bacteria 6857
203 Ga0453684_0037218 3300044712 Bacteria 6682
204 Ga0453684_0081494 3300044712 Bacteria 4036
205 Ga0453684_0098839 3300044712 Bacteria 3576
206 Ga0466970_0000513 3300044765 Bacteria 19027
207 Ga0466957_0000442 3300044842 Bacteria 20445
208 Ga0466957_0012892 3300044842 Bacteria 4844
209 Ga0466959_0007563 3300045049 Bacteria 7636
210 Ga0451576_0000363 3300045051 Bacteria 108839
211 Ga0451576_0001097 3300045051 Bacteria 49425
212 Ga0451576_0003983 3300045051 Bacteria 19667
213 Ga0451576_0006747 3300045051 Bacteria 13975
214 Ga0451576_0010558 3300045051 Bacteria 10578
215 Ga0495668_0000592 3300046616 Bacteria 44008
216 Ga0495668_0008498 3300046616 Bacteria 6399
217 Ga0495611_0000785 3300046648 Bacteria 17670
218 Ga0495687_000010 3300047443 Bacteria 413735
219 Ga0495686_0000195 3300047472 Bacteria 113003
220 Ga0496121_0000007 3300048924 Bacteria 942516
221 Ga0501031_0017640 3300049568 Bacteria 4641
222 Ga0501033_0027272 3300049570 Bacteria 4294
223 Ga0501034_0000114 3300049571 Bacteria 148505
224 Ga0501034_0011063 3300049571 Bacteria 9371
225 Ga0501034_0031715 3300049571 Bacteria 5367
226 Ga0501034_0074291 3300049571 Bacteria 3408
227 Ga0501037_0015026 3300049573 Bacteria 5694
228 Ga0501047_0034952 3300049581 Bacteria 4853
229 Ga0501035_0013893 3300049822 Bacteria 7429
230 Ga0501044_0006684 3300049823 Bacteria 12713
231 Ga0501044_0032781 3300049823 Bacteria 5460
232 Ga0501044_0064656 3300049823 Bacteria 3734
233 nmdc:mga0k408_17715_c1 3300050493 Bacteria 3969
234 nmdc:mga0qj67_3636_c1 3300050509 Bacteria 11125
235 nmdc:mga06r32_36064_c1 3300050510 Bacteria 4670
236 Ga0500583_0000031 3300053092 Bacteria 104319
237 Ga0500583_0000688 3300053092 Bacteria 9875
238 Ga0500583_0011292 3300053092 Bacteria 3358
239 Ga0500562_000006 3300053108 Bacteria 249231
240 Ga0500616_0000849 3300053153 Bacteria 34031
241 Ga0500616_0010057 3300053153 Bacteria 5684
242 Ga0500622_0002075 3300053156 Bacteria 14930
243 Ga0500627_0000524 3300053158 Bacteria 10349

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300025208 Ga0209436_103022 Ga0209436_1030223 738
2 3300028800 Ga0265338_10004411 Ga0265338_100044113 741
3 3300049571 Ga0501034_0031715 Ga0501034_0031715_69_2555 743
4 3300031344 Ga0265316_10034434 Ga0265316_100344342 749
5 3300028381 Ga0268264_10061627 Ga0268264_100616271 752
6 3300028556 Ga0265337_1002510 Ga0265337_10025105 752
7 3300031250 Ga0265331_10005587 Ga0265331_100055875 752
8 3300031595 Ga0265313_10019215 Ga0265313_100192152 752
9 3300013104 Ga0157370_10027589 Ga0157370_100275895 756
10 3300028563 Ga0265319_1000745 Ga0265319_100074510 759
11 3300031240 Ga0265320_10013806 Ga0265320_100138063 759
12 3300044712 Ga0453684_0000093 Ga0453684_0000093_200517_203009 759
13 3300005436 Ga0070713_100020219 Ga0070713_1000202192 761
14 3300044712 Ga0453684_0034433 Ga0453684_0034433_3207_5711 763
15 3300049823 Ga0501044_0006684 Ga0501044_0006684_5146_7626 764
16 3300028577 Ga0265318_10007914 Ga0265318_100079144 768
17 3300028654 Ga0265322_10002628 Ga0265322_100026282 768
18 3300028666 Ga0265336_10001537 Ga0265336_100015375 768
19 3300028800 Ga0265338_10000796 Ga0265338_1000079634 768
20 3300028800 Ga0265338_10009277 Ga0265338_100092774 768
21 3300031247 Ga0265340_10007769 Ga0265340_100077692 768
22 3300031251 Ga0265327_10008500 Ga0265327_100085002 768
23 3300031344 Ga0265316_10001718 Ga0265316_1000171817 768
24 3300031595 Ga0265313_10003752 Ga0265313_100037525 768
25 3300031711 Ga0265314_10002055 Ga0265314_1000205515 768
26 3300028563 Ga0265319_1010372 Ga0265319_10103722 772
27 3300028563 Ga0265319_1013472 Ga0265319_10134721 772
28 3300028577 Ga0265318_10000401 Ga0265318_1000040122 772
29 3300028577 Ga0265318_10008393 Ga0265318_100083932 772
30 3300028653 Ga0265323_10002345 Ga0265323_100023452 772
31 3300031240 Ga0265320_10001063 Ga0265320_100010636 772
32 3300031251 Ga0265327_10000032 Ga0265327_100000322 773
33 3300045051 Ga0451576_0003983 Ga0451576_0003983_13638_16139 773
34 3300048924 Ga0496121_0000007 Ga0496121_0000007_655990_658590 773
35 3300042876 Ga0451577_0000469 Ga0451577_0000469_41316_43832 774
36 3300028800 Ga0265338_10008368 Ga0265338_100083682 776
37 3300015265 Ga0182005_1000126 Ga0182005_100012627 777
38 3300031728 Ga0316578_10004711 Ga0316578_100047112 778
39 3300044712 Ga0453684_0037218 Ga0453684_0037218_1321_3807 778
40 3300028563 Ga0265319_1002315 Ga0265319_10023153 779
41 3300014745 Ga0157377_10024953 Ga0157377_100249531 780
42 3300005618 Ga0068864_100072116 Ga0068864_1000721161 781
43 3300042876 Ga0451577_0005689 Ga0451577_0005689_6899_9436 782
44 3300044712 Ga0453684_0000091 Ga0453684_0000091_355433_357946 782
45 3300026116 Ga0207674_10034192 Ga0207674_100341922 783
46 3300044712 Ga0453684_0004075 Ga0453684_0004075_22132_24663 783
47 3300009553 Ga0105249_10017223 Ga0105249_100172236 784
48 3300044712 Ga0453684_0027139 Ga0453684_0027139_173_2707 784
49 3300005366 Ga0070659_100008528 Ga0070659_1000085282 785
50 3300025961 Ga0207712_10005588 Ga0207712_100055882 785
51 3300031344 Ga0265316_10003388 Ga0265316_100033887 785
52 3300005329 Ga0070683_100017270 Ga0070683_1000172704 786
53 3300005339 Ga0070660_100016601 Ga0070660_1000166014 786
54 3300005530 Ga0070679_100020127 Ga0070679_1000201272 786
55 3300005535 Ga0070684_100031667 Ga0070684_1000316673 786
56 3300005539 Ga0068853_100029533 Ga0068853_1000295332 786
57 3300005564 Ga0070664_100025954 Ga0070664_1000259542 786
58 3300005614 Ga0068856_100033951 Ga0068856_1000339513 786
59 3300013100 Ga0157373_10008520 Ga0157373_100085206 786
60 3300013105 Ga0157369_10043884 Ga0157369_100438841 786
61 3300013296 Ga0157374_10012146 Ga0157374_100121466 786
62 3300013307 Ga0157372_10049606 Ga0157372_100496063 786
63 3300026041 Ga0207639_10062729 Ga0207639_100627291 786
64 3300044673 Ga0453683_0000621 Ga0453683_0000621_30219_32756 786
65 3300044712 Ga0453684_0035783 Ga0453684_0035783_3352_5889 786
66 3300044712 Ga0453684_0081494 Ga0453684_0081494_98_2635 786
67 3300045051 Ga0451576_0000363 Ga0451576_0000363_30649_33186 786
68 3300045051 Ga0451576_0001097 Ga0451576_0001097_40606_43143 786
69 3300045051 Ga0451576_0010558 Ga0451576_0010558_7521_10046 786
70 3300025949 Ga0207667_10067199 Ga0207667_100671993 787
71 3300031251 Ga0265327_10000644 Ga0265327_100006444 787
72 3300031344 Ga0265316_10003606 Ga0265316_100036063 787
73 3300036712 Ga0316584_0004130 Ga0316584_0004130_1169_3598 788
74 3300044658 Ga0466972_0012588 Ga0466972_0012588_1645_4227 789
75 3300006028 Ga0070717_10000003 Ga0070717_1000000391 790
76 3300037312 Ga0395899_0046291 Ga0395899_0046291_85_2730 790
77 3300038443 Ga0395901_0002281 Ga0395901_0002281_14868_17513 790
78 3300044712 Ga0453684_0098839 Ga0453684_0098839_381_2906 790
79 3300049823 Ga0501044_0064656 Ga0501044_0064656_455_3070 790
80 3300013104 Ga0157370_10024340 Ga0157370_100243402 791
81 3300028563 Ga0265319_1000022 Ga0265319_100002250 791
82 3300028577 Ga0265318_10000402 Ga0265318_100004023 791
83 3300031240 Ga0265320_10019859 Ga0265320_100198592 791
84 3300031711 Ga0265314_10006551 Ga0265314_100065512 791
85 3300044712 Ga0453684_0004764 Ga0453684_0004764_22296_24788 792
86 3300044712 Ga0453684_0023928 Ga0453684_0023928_3869_6415 793
87 3300005366 Ga0070659_100005484 Ga0070659_1000054846 798
88 3300025904 Ga0207647_10001562 Ga0207647_1000156212 798
89 3300005563 Ga0068855_100009367 Ga0068855_1000093672 802
90 3300005614 Ga0068856_100052162 Ga0068856_1000521621 802
91 3300025949 Ga0207667_10018707 Ga0207667_100187074 802
92 3300049570 Ga0501033_0027272 Ga0501033_0027272_216_2882 802
93 3300050509 nmdc:mga0qj67_3636_c1 nmdc:mga0qj67_3636_c1_1821_4385 802
94 3300003320 rootH2_10000316 rootH2_100003163 803
95 3300006847 Ga0075431_100017748 Ga0075431_1000177481 803
96 3300006237 Ga0097621_100028895 Ga0097621_1000288952 804
97 3300006358 Ga0068871_100006679 Ga0068871_1000066793 804
98 3300014969 Ga0157376_10074836 Ga0157376_100748361 804
99 3300025921 Ga0207652_10035881 Ga0207652_100358812 804
100 3300050510 nmdc:mga06r32_36064_c1 nmdc:mga06r32_36064_c1_1147_3744 804
101 3300005617 Ga0068859_100017167 Ga0068859_1000171674 805
102 3300006931 Ga0097620_100017167 Ga0097620_1000171674 805
103 3300010375 Ga0105239_10001322 Ga0105239_100013225 805
104 3300025908 Ga0207643_10001857 Ga0207643_100018572 805
105 3300045049 Ga0466959_0007563 Ga0466959_0007563_4923_7460 805
106 3300013105 Ga0157369_10022360 Ga0157369_100223602 806
107 3300014326 Ga0157380_10011227 Ga0157380_100112272 806
108 3300053092 Ga0500583_0000031 Ga0500583_0000031_75655_78345 806
109 3300033180 Ga0307510_10000555 Ga0307510_1000055511 808
110 3300044712 Ga0453684_0026348 Ga0453684_0026348_2580_5078 808
111 3300025940 Ga0207691_10021910 Ga0207691_100219102 810
112 3300025960 Ga0207651_10015865 Ga0207651_100158653 810
113 3300045051 Ga0451576_0006747 Ga0451576_0006747_4778_7273 810
114 3300003354 JGI25160J50197_1000790 JGI25160J50197_10007903 811
115 3300025913 Ga0207695_10000280 Ga0207695_1000028072 811
116 3300026089 Ga0207648_10031470 Ga0207648_100314702 811
117 3300042876 Ga0451577_0044957 Ga0451577_0044957_1012_3537 811
118 3300044712 Ga0453684_0030274 Ga0453684_0030274_2143_4668 811
119 3300044712 Ga0453684_0031453 Ga0453684_0031453_2679_5204 811
120 3300025302 Ga0207426_1000019 Ga0207426_1000019160 812
121 3300026116 Ga0207674_10072106 Ga0207674_100721062 812
122 3300010375 Ga0105239_10000246 Ga0105239_1000024630 813
123 3300013296 Ga0157374_10000002 Ga0157374_10000002529 813
124 3300026116 Ga0207674_10022225 Ga0207674_100222254 813
125 3300049571 Ga0501034_0074291 Ga0501034_0074291_16_2682 813
126 3300046648 Ga0495611_0000785 Ga0495611_0000785_10882_13539 814
127 3300025949 Ga0207667_10042363 Ga0207667_100423632 815
128 3300009093 Ga0105240_10087304 Ga0105240_100873042 816
129 3300053108 Ga0500562_000006 Ga0500562_000006_198242_200875 816
130 3300005329 Ga0070683_100001916 Ga0070683_10000191612 818
131 3300005563 Ga0068855_100000420 Ga0068855_10000042017 818
132 3300009093 Ga0105240_10002800 Ga0105240_1000280022 818
133 3300013104 Ga0157370_10006521 Ga0157370_100065219 818
134 3300025913 Ga0207695_10000060 Ga0207695_1000006029 818
135 3300025944 Ga0207661_10021329 Ga0207661_100213293 818
136 3300025949 Ga0207667_10000241 Ga0207667_1000024137 818
137 3300013297 Ga0157378_10040128 Ga0157378_100401281 820
138 3300009093 Ga0105240_10000194 Ga0105240_1000019467 821
139 3300025913 Ga0207695_10000016 Ga0207695_10000016579 821
140 3300049581 Ga0501047_0034952 Ga0501047_0034952_1145_3781 821
141 3300044656 Ga0466969_0000667 Ga0466969_0000667_1664_4306 822
142 3300044706 Ga0466964_0008316 Ga0466964_0008316_691_3327 822
143 3300009545 Ga0105237_10001232 Ga0105237_1000123233 823
144 3300025914 Ga0207671_10003713 Ga0207671_100037134 823
145 3300025961 Ga0207712_10004048 Ga0207712_100040487 823
146 3300028794 Ga0307515_10000001 Ga0307515_10000001116 823
147 3300047443 Ga0495687_000010 Ga0495687_000010_54385_57030 823
148 3300005843 Ga0068860_100000103 Ga0068860_10000010331 824
149 3300006358 Ga0068871_100026969 Ga0068871_1000269692 824
150 3300013306 Ga0163162_10000269 Ga0163162_1000026911 824
151 3300013306 Ga0163162_10066041 Ga0163162_100660413 824
152 3300028381 Ga0268264_10000013 Ga0268264_10000013289 824
153 3300044842 Ga0466957_0012892 Ga0466957_0012892_906_3542 824
154 3300049571 Ga0501034_0000114 Ga0501034_0000114_33080_35683 824
155 3300025931 Ga0207644_10047507 Ga0207644_100475072 825
156 3300053156 Ga0500622_0002075 Ga0500622_0002075_10278_12914 825
157 3300005356 Ga0070674_100019185 Ga0070674_1000191852 826
158 3300025937 Ga0207669_10013533 Ga0207669_100135332 826
159 3300053092 Ga0500583_0000688 Ga0500583_0000688_6304_9000 826
160 3300006237 Ga0097621_100000122 Ga0097621_10000012243 827
161 3300009147 Ga0114129_10007580 Ga0114129_100075807 827
162 3300013306 Ga0163162_10000703 Ga0163162_100007036 827
163 3300013308 Ga0157375_10000162 Ga0157375_100001624 827
164 3300014969 Ga0157376_10001661 Ga0157376_100016612 827
165 3300021384 Ga0213876_10003920 Ga0213876_100039205 827
166 3300039437 Ga0436365_0086950 Ga0436365_0086950_978_3518 827
167 3300039437 Ga0436365_1250123 Ga0436365_1250123_3571_6216 827
168 3300046616 Ga0495668_0008498 Ga0495668_0008498_1565_4243 827
169 3300005843 Ga0068860_100001554 Ga0068860_10000155414 828
170 3300013306 Ga0163162_10000511 Ga0163162_1000051133 828
171 3300017792 Ga0163161_10001382 Ga0163161_1000138217 828
172 3300028381 Ga0268264_10002026 Ga0268264_1000202610 828
173 3300053153 Ga0500616_0000849 Ga0500616_0000849_12953_15679 828
174 3300053158 Ga0500627_0000524 Ga0500627_0000524_7009_9738 828
175 iso_pu_bacteria 2914759650 2914759802 828
176 3300009093 Ga0105240_10001038 Ga0105240_1000103834 830
177 iso_pu_bacteria 2818991442 2819575672 830
178 3300005330 Ga0070690_100033839 Ga0070690_1000338391 831
179 3300005355 Ga0070671_100010199 Ga0070671_1000101993 831
180 3300005364 Ga0070673_100012487 Ga0070673_1000124872 831
181 3300005615 Ga0070702_100005884 Ga0070702_1000058844 831
182 3300005617 Ga0068859_100020639 Ga0068859_1000206391 831
183 3300005843 Ga0068860_100008897 Ga0068860_1000088976 831
184 3300006931 Ga0097620_100020638 Ga0097620_1000206381 831
185 3300009174 Ga0105241_10027357 Ga0105241_100273571 831
186 3300010375 Ga0105239_10003948 Ga0105239_100039489 831
187 3300013297 Ga0157378_10007640 Ga0157378_100076403 831
188 3300013307 Ga0157372_10067057 Ga0157372_100670572 831
189 3300014745 Ga0157377_10015748 Ga0157377_100157482 831
190 3300025931 Ga0207644_10026974 Ga0207644_100269742 831
191 3300026088 Ga0207641_10017308 Ga0207641_100173082 831
192 3300028381 Ga0268264_10008453 Ga0268264_100084536 831
193 3300028794 Ga0307515_10005512 Ga0307515_100055122 831
194 3300014325 Ga0163163_10005940 Ga0163163_100059409 832
195 3300006195 Ga0075366_10003936 Ga0075366_100039365 833
196 3300044842 Ga0466957_0000442 Ga0466957_0000442_17037_19673 833
197 3300046616 Ga0495668_0000592 Ga0495668_0000592_11836_14559 833
198 3300050493 nmdc:mga0k408_17715_c1 nmdc:mga0k408_17715_c1_71_2785 833
199 3300005539 Ga0068853_100024215 Ga0068853_1000242153 834
200 3300010375 Ga0105239_10009108 Ga0105239_100091083 834
201 3300025913 Ga0207695_10042237 Ga0207695_100422373 834
202 3300049568 Ga0501031_0017640 Ga0501031_0017640_1387_3963 834
203 3300005335 Ga0070666_10000127 Ga0070666_100001273 835
204 3300005617 Ga0068859_100000098 Ga0068859_10000009816 835
205 3300005841 Ga0068863_100014852 Ga0068863_1000148523 835
206 3300005842 Ga0068858_100009184 Ga0068858_1000091842 835
207 3300005843 Ga0068860_100016712 Ga0068860_1000167124 835
208 3300006931 Ga0097620_100000098 Ga0097620_10000009816 835
209 3300009101 Ga0105247_10012511 Ga0105247_100125112 835
210 3300009545 Ga0105237_10003853 Ga0105237_100038532 835
211 3300010375 Ga0105239_10039964 Ga0105239_100399642 835
212 3300013306 Ga0163162_10000376 Ga0163162_1000037627 835
213 3300025903 Ga0207680_10000408 Ga0207680_100004082 835
214 3300025914 Ga0207671_10002175 Ga0207671_100021755 835
215 3300025942 Ga0207689_10000357 Ga0207689_1000035735 835
216 3300026035 Ga0207703_10016099 Ga0207703_100160992 835
217 3300026088 Ga0207641_10000840 Ga0207641_1000084013 835
218 3300026142 Ga0207698_10005303 Ga0207698_100053033 835
219 iso_pu_bacteria 2881955468 2881955472 835
220 3300003320 rootH2_10011844 rootH2_100118448 837
221 3300005563 Ga0068855_100063664 Ga0068855_1000636641 837
222 3300005616 Ga0068852_100003236 Ga0068852_1000032367 837
223 3300009093 Ga0105240_10004646 Ga0105240_1000464611 837
224 3300009093 Ga0105240_10011235 Ga0105240_100112353 837
225 3300010375 Ga0105239_10007727 Ga0105239_100077272 837
226 3300013104 Ga0157370_10003477 Ga0157370_1000347710 837
227 3300013105 Ga0157369_10031495 Ga0157369_100314951 837
228 3300013307 Ga0157372_10001229 Ga0157372_1000122910 837
229 3300025913 Ga0207695_10006326 Ga0207695_100063263 837
230 3300025949 Ga0207667_10002377 Ga0207667_100023779 837
231 3300026142 Ga0207698_10006222 Ga0207698_100062226 837
232 3300031616 Ga0307508_10000354 Ga0307508_1000035434 837
233 3300044658 Ga0466972_0000030 Ga0466972_0000030_91884_94535 837
234 3300044765 Ga0466970_0000513 Ga0466970_0000513_7400_10051 837
235 iso_pu_bacteria 2929154850 2929156595 837
236 3300053153 Ga0500616_0010057 Ga0500616_0010057_1645_4260 838
237 iso_pu_bacteria 2818991444 2819588217 838
238 3300005548 Ga0070665_100000009 Ga0070665_10000000949 839
239 3300013307 Ga0157372_10041651 Ga0157372_100416512 839
240 3300028379 Ga0268266_10000105 Ga0268266_1000010596 839
241 3300047472 Ga0495686_0000195 Ga0495686_0000195_635_3277 839
242 3300049571 Ga0501034_0011063 Ga0501034_0011063_2207_4795 839
243 3300049573 Ga0501037_0015026 Ga0501037_0015026_910_3498 839
244 3300049822 Ga0501035_0013893 Ga0501035_0013893_3798_6386 839
245 3300049823 Ga0501044_0032781 Ga0501044_0032781_818_3406 839
246 3300053092 Ga0500583_0011292 Ga0500583_0011292_172_2817 839
247 3300003203 JGI25406J46586_10001836 JGI25406J46586_100018364 842
248 3300005985 Ga0081539_10000534 Ga0081539_1000053415 842

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00521

DNA_topoisoIV

DNA gyrase/topoisomerase IV, subunit A

49

490

0.99

PF03989

DNA_gyraseA_C

DNA gyrase C-terminal domain, beta-propeller

571

621

0.94

PF03989

DNA_gyraseA_C

DNA gyrase C-terminal domain, beta-propeller

681

728

0.92

PF03989

DNA_gyraseA_C

DNA gyrase C-terminal domain, beta-propeller

632

677

0.91

PF03989

DNA_gyraseA_C

DNA gyrase C-terminal domain, beta-propeller

792

839

0.91

PF03989

DNA_gyraseA_C

DNA gyrase C-terminal domain, beta-propeller

734

789

0.89

PF03989

DNA_gyraseA_C

DNA gyrase C-terminal domain, beta-propeller

521

568

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4z3o-assembly1.cif.gz_B quinolone(moxifloxacin)-dna cleavage complex of topoisomerase iv from s. pneumoniae 0.9611 35 496
3ifz-assembly1.cif.gz_B crystal structure of the first part of the mycobacterium tuberculosis dna gyrase reaction core: the breakage and reunion domain at 2.7 a resolution 0.9584 31 498
2inr-assembly1.cif.gz_A-2 crystal structure of a 59 kda fragment of topoisomerase iv subunit a (grla) from staphylococcus aureus 0.9584 41 498
5npk-assembly1.cif.gz_D 1.98a structure of thiophene1 with s.aureus dna gyrase and dna 0.9571 21 498
5npk-assembly2.cif.gz_b 1.98a structure of thiophene1 with s.aureus dna gyrase and dna 0.9571 21 497
ID Description Score Start End Superfamily
4ddqF02 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2; 0.957 245 341 3.30.1360.40
4ddqF02 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2; 0.9382 245 341 3.30.1360.40
4z3oB04 Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 0.9361 379 466 1.10.268.10
2wl2A01 Alpha Beta;Alpha-Beta Complex;Topoisomerase II; domain 5;Topoisomerase II, domain 5 0.932 32 497 3.90.199.10
2xcrU04 Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 0.9316 379 467 1.10.268.10
ID Description Score Start End GO Terms
AF-A0A3C0YL53-F1-model_v4 deleted 0.9746 249 373
AF-A0A3C2ES54-F1-model_v4 deleted 0.9627 183 344
AF-W1V7W8-F1-model_v4 deleted 0.9611 182 352
AF-J5NCK5-F1-model_v4 deleted 0.9607 217 376
AF-A0A3C0G7K6-F1-model_v4 DNA gyrase subunit A 0.96 43 389 GO:0003677
GO:0005524
GO:0005737
GO:0006265
GO:0009330
GO:0034335

Feature Viewer

pLDDT pTM Quality
77.67 0.58 Medium
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Predicted Structure (AlphaFold2)

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