F359688

General Info

Members Datasets Scaffolds Average Seq Length
248 159 496 612

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100004442|Ga0070708_1000044427
Length 609
Sequence MEGPELWRELGQQFRVDSVRCAAEAKSGHPTSGMSAADLMAVLLAKYYRYDFDEPKDPANDRLVFSKGHASTLLYAMYKAAGVISDEELLTYRQFSSIFEGHPTPRIPWVDVATGSLGQGLPYGVGMAIAGKRLDRTQMRAWVLVGDSEMAEGSQWEGFEHAAYYELDNIVAILDINRLGQRGETMHGWDLDSYANRARAFGWHAIEIDGHDVEAIDQAYGEAIATDRPVAIVAHTIKGKGVKAVENKPGWHGKALDNPEEAIEELGGIRNIVVDVAKPETSGRPIEIEYKELELPRYELGEEVATRKAYGEALAALGKARGDVVAMDGEVSNSTFAEIFRDAVPERYFEMYIAEQQLIAAAVGMQVTGWRPFASTFAAFISRAYDFVRMSAISRANYCLSGSHAGVSIGEDGPSQMALEDIAALRAVHGSTVLHPCDANQTARLVAKMVEREGIVYLRTLRPNTPVIYDSGEEFEIGGSRTLRDGDDVAIIGAGITLHEALKAADELAADGIESRVIDLYSIKPLDEETIRSLAMPIVTVEDHWAEGGLGEAVLSTLADSEERPRVELLAVRQMPHSGKPAELLAEAGIDAEHIAEAARRLVGATVSA

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
42 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
43 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
62 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
64 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
65 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
66 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
67 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
68 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
69 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
70 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
71 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
72 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
73 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
76 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
77 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
78 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
79 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
80 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
81 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
82 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
83 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
84 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
85 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
86 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
87 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
88 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
89 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
90 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
91 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
92 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
95 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
96 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
97 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
98 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
99 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
100 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
101 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
104 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
105 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
111 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
112 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
116 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
117 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
118 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
123 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
128 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
129 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
130 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
131 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
132 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
136 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
140 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
143 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
144 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
145 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
146 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
147 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
148 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
149 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
150 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
151 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
152 2891562705 Microbispora tritici MT50 Isolate Unclassified
153 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
154 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
155 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
156 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
157 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
158 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
159 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.15
Metatranscriptomes 1.21
Isolates 5.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.66
Rhizosphere 88.31
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100004442 3300005445 Bacteria 11026
2 Ga0070683_100007597 3300005329 Bacteria 9167
3 Ga0070703_10001178 3300005406 Bacteria 8043
4 Ga0070713_100001727 3300005436 Bacteria 14074
5 Ga0070710_10018039 3300005437 Bacteria 3624
6 Ga0070711_100044132 3300005439 Bacteria 3024
7 Ga0070662_100076888 3300005457 Bacteria 2476
8 Ga0070706_100063337 3300005467 Bacteria 3417
9 Ga0070706_100095637 3300005467 Bacteria 2758
10 Ga0070707_100008184 3300005468 Bacteria 9701
11 Ga0070698_100008649 3300005471 Bacteria 10972
12 Ga0070679_100125489 3300005530 Bacteria 2549
13 Ga0070684_100000415 3300005535 Bacteria 29189
14 Ga0070684_100127076 3300005535 Bacteria 2297
15 Ga0070695_100001220 3300005545 Bacteria 14134
16 Ga0070696_100039931 3300005546 Bacteria 3240
17 Ga0070665_100107584 3300005548 Bacteria 2791
18 Ga0068855_100053056 3300005563 Bacteria 4771
19 Ga0068855_100058250 3300005563 Bacteria 4525
20 Ga0070664_100009080 3300005564 Bacteria 8067
21 Ga0068857_100002419 3300005577 Bacteria 15229
22 Ga0068852_100069108 3300005616 Bacteria 3094
23 Ga0068864_100045185 3300005618 Bacteria 3778
24 Ga0068861_100018933 3300005719 Bacteria 4910
25 Ga0081455_10010590 3300005937 Bacteria 9332
26 Ga0081455_10044952 3300005937 Bacteria 3846
27 Ga0081538_10013910 3300005981 Bacteria 6340
28 Ga0081540_1004451 3300005983 Bacteria 10681
29 Ga0081539_10002539 3300005985 Bacteria 25392
30 Ga0070717_10002360 3300006028 Bacteria 13300
31 Ga0070717_10025556 3300006028 Bacteria 4699
32 Ga0070715_10005932 3300006163 Bacteria 4117
33 Ga0070716_100010724 3300006173 Bacteria 4604
34 Ga0070712_100055285 3300006175 Bacteria 2779
35 Ga0075428_100024263 3300006844 Bacteria 6709
36 Ga0075430_100001014 3300006846 Bacteria 22208
37 Ga0075431_100010289 3300006847 Bacteria 9401
38 Ga0075431_100040973 3300006847 Bacteria 4775
39 Ga0075433_10036157 3300006852 Bacteria 4252
40 Ga0075436_100007347 3300006914 Bacteria 7529
41 Ga0075435_100000910 3300007076 Bacteria 18612
42 Ga0075435_100023420 3300007076 Bacteria 4777
43 Ga0111539_10004173 3300009094 Bacteria 18955
44 Ga0111539_10027039 3300009094 Bacteria 7007
45 Ga0105237_10016199 3300009545 Bacteria 7752
46 Ga0105239_10056888 3300010375 Bacteria 4289
47 Ga0157369_10152471 3300013105 Bacteria 2442
48 Ga0157372_10079490 3300013307 Bacteria 3709
49 Ga0157372_10089779 3300013307 Bacteria 3492
50 Ga0157377_10007080 3300014745 Bacteria 5390
51 Ga0163161_10038750 3300017792 Bacteria 3419
52 Ga0224712_10004599 3300022467 Bacteria 3740
53 Ga0224712_10022868 3300022467 Bacteria 2161
54 Ga0224712_10023984 3300022467 Bacteria 2125
55 Ga0207692_10006158 3300025898 Bacteria 4856
56 Ga0207688_10001344 3300025901 Bacteria 12778
57 Ga0207684_10035677 3300025910 Bacteria 4222
58 Ga0207684_10067758 3300025910 Bacteria 3033
59 Ga0207695_10014469 3300025913 Bacteria 9342
60 Ga0207693_10005759 3300025915 Bacteria 10280
61 Ga0207693_10037465 3300025915 Bacteria 3822
62 Ga0207649_10043127 3300025920 Bacteria 2756
63 Ga0207652_10070725 3300025921 Bacteria 3031
64 Ga0207646_10002668 3300025922 Bacteria 20905
65 Ga0207646_10012089 3300025922 Bacteria 8310
66 Ga0207646_10031209 3300025922 Bacteria 4825
67 Ga0207687_10064482 3300025927 Bacteria 2598
68 Ga0207700_10104987 3300025928 Bacteria 2262
69 Ga0207664_10081347 3300025929 Bacteria 2635
70 Ga0207706_10051911 3300025933 Bacteria 3620
71 Ga0207706_10074239 3300025933 Bacteria 2991
72 Ga0207661_10014860 3300025944 Bacteria 5710
73 Ga0207661_10024834 3300025944 Bacteria 4548
74 Ga0207677_10011970 3300026023 Bacteria 4968
75 Ga0207702_10073466 3300026078 Bacteria 2949
76 Ga0207674_10000754 3300026116 Bacteria 42273
77 Ga0207698_10031561 3300026142 Bacteria 3826
78 Ga0207428_10031267 3300027907 Bacteria 4396
79 Ga0268264_10127666 3300028381 Bacteria 2250
80 Ga0307508_10003284 3300031616 Bacteria 16480
81 Ga0307405_10022990 3300031731 Bacteria 3535
82 Ga0307406_10024585 3300031901 Bacteria 3600
83 Ga0307407_10030821 3300031903 Bacteria 2898
84 Ga0307415_100009541 3300032126 Bacteria 5447
85 Ga0373937_0002370 3300036401 Bacteria 15688
86 Ga0395899_0018228 3300037312 Bacteria 5340
87 Ga0395899_0032069 3300037312 Bacteria 3947
88 Ga0395900_0005105 3300037418 Bacteria 13785
89 Ga0395900_0014725 3300037418 Bacteria 7975
90 Ga0395900_0023487 3300037418 Bacteria 6310
91 Ga0395900_0036398 3300037418 Bacteria 5074
92 Ga0395900_0099537 3300037418 Bacteria 2986
93 Ga0395900_0102746 3300037418 Bacteria 2936
94 Ga0395898_0001901 3300037466 Bacteria 26597
95 Ga0395898_0009564 3300037466 Bacteria 10183
96 Ga0395898_0014730 3300037466 Bacteria 8028
97 Ga0395898_0019242 3300037466 Bacteria 6951
98 Ga0395898_0032359 3300037466 Bacteria 5220
99 Ga0395898_0034196 3300037466 Bacteria 5067
100 Ga0395898_0115594 3300037466 Bacteria 2571
101 Ga0395905_0002351 3300037471 Bacteria 21071
102 Ga0395905_0005305 3300037471 Bacteria 13181
103 Ga0395905_0008546 3300037471 Bacteria 10098
104 Ga0395905_0016472 3300037471 Bacteria 7026
105 Ga0395905_0035659 3300037471 Bacteria 4670
106 Ga0395905_0047342 3300037471 Bacteria 4030
107 Ga0436364_0764228 3300037853 Bacteria 9736
108 Ga0395901_0002346 3300038443 Bacteria 19268
109 Ga0395901_0004687 3300038443 Bacteria 13787
110 Ga0395901_0006134 3300038443 Bacteria 12176
111 Ga0395901_0008291 3300038443 Bacteria 10500
112 Ga0395901_0009286 3300038443 Bacteria 9968
113 Ga0395901_0016152 3300038443 Bacteria 7603
114 Ga0395901_0019329 3300038443 Bacteria 6964
115 Ga0395901_0024175 3300038443 Bacteria 6234
116 Ga0395901_0091978 3300038443 Bacteria 3175
117 Ga0395901_0160177 3300038443 Bacteria 2364
118 Ga0436362_0711952 3300039453 Bacteria 4025
119 Ga0451835_0465760 3300041492 Bacteria 3197
120 Ga0466961_0017650 3300044693 Bacteria 4584
121 Ga0466963_0000049 3300044694 Bacteria 39571
122 Ga0466963_0000905 3300044694 Bacteria 15074
123 Ga0466963_0006001 3300044694 Bacteria 7159
124 Ga0466963_0020803 3300044694 Bacteria 4130
125 Ga0466968_0001014 3300044735 Bacteria 9899
126 Ga0466970_0040255 3300044765 Bacteria 2482
127 Ga0466957_0007860 3300044842 Bacteria 6046
128 Ga0466957_0022183 3300044842 Bacteria 3743
129 Ga0466960_0016973 3300044901 Bacteria 3167
130 Ga0466959_0006057 3300045049 Bacteria 8345
131 Ga0466959_0013371 3300045049 Bacteria 5951
132 Ga0466967_0000159 3300045976 Bacteria 27108
133 Ga0466967_0018378 3300045976 Bacteria 5583
134 Ga0466967_0057944 3300045976 Bacteria 3422
135 Ga0466967_0069650 3300045976 Bacteria 3144
136 Ga0495592_0001046 3300046454 Bacteria 19192
137 Ga0495592_0002851 3300046454 Bacteria 12277
138 Ga0495592_0015721 3300046454 Bacteria 5740
139 Ga0495651_0000004 3300046462 Bacteria 177080
140 Ga0495651_0000092 3300046462 Bacteria 66143
141 Ga0495651_0000097 3300046462 Bacteria 64676
142 Ga0495653_0003612 3300046463 Bacteria 12475
143 Ga0495653_0029239 3300046463 Bacteria 4402
144 Ga0495596_0017221 3300046500 Bacteria 2996
145 Ga0495608_0022804 3300046511 Bacteria 4294
146 Ga0495608_0058751 3300046511 Bacteria 2535
147 Ga0495618_0003214 3300046514 Bacteria 10239
148 Ga0495618_0003812 3300046514 Bacteria 9330
149 Ga0495628_0001177 3300046516 Bacteria 23864
150 Ga0495628_0001325 3300046516 Bacteria 22701
151 Ga0495628_0026811 3300046516 Bacteria 4691
152 Ga0495644_0005005 3300046523 Bacteria 5187
153 Ga0495652_0000047 3300046529 Bacteria 121525
154 Ga0495652_0000279 3300046529 Bacteria 60365
155 Ga0495652_0001520 3300046529 Bacteria 25446
156 Ga0495652_0024242 3300046529 Bacteria 5372
157 Ga0495587_0000103 3300046536 Bacteria 64471
158 Ga0495587_0000886 3300046536 Bacteria 19796
159 Ga0495587_0004862 3300046536 Bacteria 8815
160 Ga0495645_0000028 3300046543 Bacteria 113461
161 Ga0495645_0000054 3300046543 Bacteria 84855
162 Ga0495657_0002632 3300046675 Bacteria 15029
163 Ga0495599_0000073 3300046678 Bacteria 70685
164 Ga0495599_0000344 3300046678 Bacteria 27562
165 Ga0495599_0040451 3300046678 Bacteria 2928
166 Ga0495599_0043245 3300046678 Bacteria 2826
167 Ga0495623_0000105 3300046679 Bacteria 51809
168 Ga0495623_0000123 3300046679 Bacteria 47116
169 Ga0495646_0001581 3300046680 Bacteria 13581
170 Ga0495624_0020081 3300046690 Bacteria 4451
171 Ga0495604_0000027 3300047317 Bacteria 143025
172 Ga0495604_0000085 3300047317 Bacteria 81234
173 Ga0495604_0043841 3300047317 Bacteria 3499
174 Ga0495680_0001582 3300047322 Bacteria 24358
175 Ga0495680_0003888 3300047322 Bacteria 14454
176 Ga0495680_0004722 3300047322 Bacteria 12957
177 Ga0495675_0000041 3300047444 Bacteria 86087
178 Ga0495675_0000273 3300047444 Bacteria 37403
179 Ga0495675_0059638 3300047444 Bacteria 2419
180 Ga0495684_0059758 3300047471 Bacteria 2902
181 Ga0495602_0000096 3300048088 Bacteria 82587
182 Ga0495602_0004214 3300048088 Bacteria 14959
183 Ga0495602_0004638 3300048088 Bacteria 14343
184 Ga0496100_0028671 3300048903 Bacteria 3435
185 Ga0496101_0100247 3300048904 Bacteria 2166
186 Ga0496102_0067168 3300048905 Bacteria 3288
187 Ga0496104_0002863 3300048907 Bacteria 14870
188 Ga0496105_0001941 3300048908 Bacteria 14854
189 Ga0496105_0094347 3300048908 Bacteria 2471
190 Ga0496106_0038343 3300048909 Bacteria 3585
191 Ga0496107_0039877 3300048910 Bacteria 3370
192 Ga0496107_0087587 3300048910 Bacteria 2273
193 Ga0496108_0094500 3300048911 Bacteria 2545
194 Ga0496109_0003099 3300048912 Bacteria 13866
195 Ga0496109_0021998 3300048912 Bacteria 5645
196 Ga0496109_0050013 3300048912 Bacteria 3807
197 Ga0496111_0001657 3300048914 Bacteria 12943
198 Ga0496111_0029126 3300048914 Bacteria 3919
199 Ga0496114_0086361 3300048917 Bacteria 2659
200 Ga0496115_0001419 3300048918 Bacteria 17150
201 Ga0496115_0018322 3300048918 Bacteria 5373
202 Ga0501036_0017166 3300049572 Bacteria 6051
203 Ga0501039_0012058 3300049575 Bacteria 6589
204 Ga0501040_0003115 3300049576 Bacteria 10752
205 Ga0501042_0009849 3300049578 Bacteria 6384
206 Ga0501067_0006378 3300049583 Bacteria 6533
207 Ga0501069_0023266 3300049585 Bacteria 3377
208 Ga0501070_0022560 3300049586 Bacteria 5272
209 Ga0501071_0011271 3300049587 Bacteria 6016
210 Ga0501072_0013647 3300049588 Bacteria 6220
211 Ga0501073_0027478 3300049589 Bacteria 4068
212 Ga0501076_0016708 3300049592 Bacteria 5566
213 Ga0501077_0004883 3300049593 Bacteria 8143
214 Ga0501079_0022045 3300049741 Bacteria 4880
215 Ga0501080_0025968 3300049742 Bacteria 5442
216 Ga0501080_0040990 3300049742 Bacteria 4316
217 Ga0501035_0032894 3300049822 Bacteria 4716
218 Ga0501045_0007767 3300049824 Bacteria 7459
219 nmdc:mga05p37_15725_c1 3300050507 Bacteria 9098
220 nmdc:mga05p37_81849_c1 3300050507 Bacteria 3977
221 nmdc:mga09592_3338_c1 3300050508 Bacteria 12980
222 nmdc:mga0qj67_2348_c1 3300050509 Bacteria 13475
223 nmdc:mga06r32_52769_c1 3300050510 Bacteria 3895
224 nmdc:mga06r32_785_c1 3300050510 Bacteria 28087
225 nmdc:mga08y16_11231_c1 3300050511 Bacteria 9409
226 nmdc:mga08y16_16427_c1 3300050511 Bacteria 7783
227 nmdc:mga0n895_19495_c1 3300050512 Bacteria 6306
228 nmdc:mga08x19_13538_c1 3300050514 Bacteria 4933
229 nmdc:mga0a205_32507_c1 3300050515 Bacteria 5002
230 Ga0495601_0000269 3300053077 Bacteria 28152
231 Ga0495619_0001233 3300053085 Bacteria 16742
232 Ga0495619_0004444 3300053085 Bacteria 8944
233 Ga0501084_0002224 3300054114 Bacteria 15582
234 Ga0501082_0056097 3300060353 Bacteria 3393
235 2554260745 2554235005 Bacteria 6457341
236 2793975878 2791355406 Bacteria 11364898
237 2856742631 2856741275 Bacteria 8096094
238 2868091583 2868088558 Bacteria 7609351
239 2891400731 2891395885 Bacteria 9251614
240 2891559505 2891554331 Bacteria 8812224
241 2891563222 2891562705 Bacteria 8039471
242 2946078837 2946072368 Bacteria 8999607
243 2997600656 2997600082 Bacteria 9896405
244 8047894178 8047893842 Bacteria 11723082
245 8048130208 8048127548 Bacteria 11053136
246 8048365198 8048356638 Bacteria 11044339
247 8048371195 8048369669 Bacteria 11666822
248 8048379996 8048379754 Bacteria 11877923
249 Ga0070708_100004442
250 Ga0070683_100007597
251 Ga0070703_10001178
252 Ga0070713_100001727
253 Ga0070710_10018039
254 Ga0070711_100044132
255 Ga0070662_100076888
256 Ga0070706_100063337
257 Ga0070706_100095637
258 Ga0070707_100008184
259 Ga0070698_100008649
260 Ga0070679_100125489
261 Ga0070684_100000415
262 Ga0070684_100127076
263 Ga0070695_100001220
264 Ga0070696_100039931
265 Ga0070665_100107584
266 Ga0068855_100053056
267 Ga0068855_100058250
268 Ga0070664_100009080
269 Ga0068857_100002419
270 Ga0068852_100069108
271 Ga0068864_100045185
272 Ga0068861_100018933
273 Ga0081455_10010590
274 Ga0081455_10044952
275 Ga0081538_10013910
276 Ga0081540_1004451
277 Ga0081539_10002539
278 Ga0070717_10002360
279 Ga0070717_10025556
280 Ga0070715_10005932
281 Ga0070716_100010724
282 Ga0070712_100055285
283 Ga0075428_100024263
284 Ga0075430_100001014
285 Ga0075431_100010289
286 Ga0075431_100040973
287 Ga0075433_10036157
288 Ga0075436_100007347
289 Ga0075435_100000910
290 Ga0075435_100023420
291 Ga0111539_10004173
292 Ga0111539_10027039
293 Ga0105237_10016199
294 Ga0105239_10056888
295 Ga0157369_10152471
296 Ga0157372_10079490
297 Ga0157372_10089779
298 Ga0157377_10007080
299 Ga0163161_10038750
300 Ga0224712_10004599
301 Ga0224712_10022868
302 Ga0224712_10023984
303 Ga0207692_10006158
304 Ga0207688_10001344
305 Ga0207684_10035677
306 Ga0207684_10067758
307 Ga0207695_10014469
308 Ga0207693_10005759
309 Ga0207693_10037465
310 Ga0207649_10043127
311 Ga0207652_10070725
312 Ga0207646_10002668
313 Ga0207646_10012089
314 Ga0207646_10031209
315 Ga0207687_10064482
316 Ga0207700_10104987
317 Ga0207664_10081347
318 Ga0207706_10051911
319 Ga0207706_10074239
320 Ga0207661_10014860
321 Ga0207661_10024834
322 Ga0207677_10011970
323 Ga0207702_10073466
324 Ga0207674_10000754
325 Ga0207698_10031561
326 Ga0207428_10031267
327 Ga0268264_10127666
328 Ga0307508_10003284
329 Ga0307405_10022990
330 Ga0307406_10024585
331 Ga0307407_10030821
332 Ga0307415_100009541
333 Ga0373937_0002370
334 Ga0395899_0018228
335 Ga0395899_0032069
336 Ga0395900_0005105
337 Ga0395900_0014725
338 Ga0395900_0023487
339 Ga0395900_0036398
340 Ga0395900_0099537
341 Ga0395900_0102746
342 Ga0395898_0001901
343 Ga0395898_0009564
344 Ga0395898_0014730
345 Ga0395898_0019242
346 Ga0395898_0032359
347 Ga0395898_0034196
348 Ga0395898_0115594
349 Ga0395905_0002351
350 Ga0395905_0005305
351 Ga0395905_0008546
352 Ga0395905_0016472
353 Ga0395905_0035659
354 Ga0395905_0047342
355 Ga0436364_0764228
356 Ga0395901_0002346
357 Ga0395901_0004687
358 Ga0395901_0006134
359 Ga0395901_0008291
360 Ga0395901_0009286
361 Ga0395901_0016152
362 Ga0395901_0019329
363 Ga0395901_0024175
364 Ga0395901_0091978
365 Ga0395901_0160177
366 Ga0436362_0711952
367 Ga0451835_0465760
368 Ga0466961_0017650
369 Ga0466963_0000049
370 Ga0466963_0000905
371 Ga0466963_0006001
372 Ga0466963_0020803
373 Ga0466968_0001014
374 Ga0466970_0040255
375 Ga0466957_0007860
376 Ga0466957_0022183
377 Ga0466960_0016973
378 Ga0466959_0006057
379 Ga0466959_0013371
380 Ga0466967_0000159
381 Ga0466967_0018378
382 Ga0466967_0057944
383 Ga0466967_0069650
384 Ga0495592_0001046
385 Ga0495592_0002851
386 Ga0495592_0015721
387 Ga0495651_0000004
388 Ga0495651_0000092
389 Ga0495651_0000097
390 Ga0495653_0003612
391 Ga0495653_0029239
392 Ga0495596_0017221
393 Ga0495608_0022804
394 Ga0495608_0058751
395 Ga0495618_0003214
396 Ga0495618_0003812
397 Ga0495628_0001177
398 Ga0495628_0001325
399 Ga0495628_0026811
400 Ga0495644_0005005
401 Ga0495652_0000047
402 Ga0495652_0000279
403 Ga0495652_0001520
404 Ga0495652_0024242
405 Ga0495587_0000103
406 Ga0495587_0000886
407 Ga0495587_0004862
408 Ga0495645_0000028
409 Ga0495645_0000054
410 Ga0495657_0002632
411 Ga0495599_0000073
412 Ga0495599_0000344
413 Ga0495599_0040451
414 Ga0495599_0043245
415 Ga0495623_0000105
416 Ga0495623_0000123
417 Ga0495646_0001581
418 Ga0495624_0020081
419 Ga0495604_0000027
420 Ga0495604_0000085
421 Ga0495604_0043841
422 Ga0495680_0001582
423 Ga0495680_0003888
424 Ga0495680_0004722
425 Ga0495675_0000041
426 Ga0495675_0000273
427 Ga0495675_0059638
428 Ga0495684_0059758
429 Ga0495602_0000096
430 Ga0495602_0004214
431 Ga0495602_0004638
432 Ga0496100_0028671
433 Ga0496101_0100247
434 Ga0496102_0067168
435 Ga0496104_0002863
436 Ga0496105_0001941
437 Ga0496105_0094347
438 Ga0496106_0038343
439 Ga0496107_0039877
440 Ga0496107_0087587
441 Ga0496108_0094500
442 Ga0496109_0003099
443 Ga0496109_0021998
444 Ga0496109_0050013
445 Ga0496111_0001657
446 Ga0496111_0029126
447 Ga0496114_0086361
448 Ga0496115_0001419
449 Ga0496115_0018322
450 Ga0501036_0017166
451 Ga0501039_0012058
452 Ga0501040_0003115
453 Ga0501042_0009849
454 Ga0501067_0006378
455 Ga0501069_0023266
456 Ga0501070_0022560
457 Ga0501071_0011271
458 Ga0501072_0013647
459 Ga0501073_0027478
460 Ga0501076_0016708
461 Ga0501077_0004883
462 Ga0501079_0022045
463 Ga0501080_0025968
464 Ga0501080_0040990
465 Ga0501035_0032894
466 Ga0501045_0007767
467 nmdc:mga05p37_15725_c1
468 nmdc:mga05p37_81849_c1
469 nmdc:mga09592_3338_c1
470 nmdc:mga0qj67_2348_c1
471 nmdc:mga06r32_52769_c1
472 nmdc:mga06r32_785_c1
473 nmdc:mga08y16_11231_c1
474 nmdc:mga08y16_16427_c1
475 nmdc:mga0n895_19495_c1
476 nmdc:mga08x19_13538_c1
477 nmdc:mga0a205_32507_c1
478 Ga0495601_0000269
479 Ga0495619_0001233
480 Ga0495619_0004444
481 Ga0501084_0002224
482 Ga0501082_0056097
483 2554260745
484 2793975878
485 2856742631
486 2868091583
487 2891400731
488 2891559505
489 2891563222
490 2946078837
491 2997600656
492 8047894178
493 8048130208
494 8048365198
495 8048371195
496 8048379996

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02779

Transket_pyr

Transketolase, pyrimidine binding domain

302

467

0.98

PF02780

Transketolase_C

Transketolase, C-terminal domain

478

595

0.95

PF00456

Transketolase_N

Transketolase, thiamine diphosphate binding domain

8

269

0.93

PF00676

E1_dh

Dehydrogenase E1 component

100

230

0.89

PF02775

TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

99

234

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kxw-assembly1.cif.gz_A human transketolase in covalent complex with donor ketose d-xylulose-5-phosphate, crystal 2 0.9562 5 611
3ooy-assembly1.cif.gz_A crystal structure of human transketolase (tkt) 0.9551 6 609
6yak-assembly1.cif.gz_DDD split gene transketolase, active alpha2beta2 heterotetramer 0.9541 303 611
6rjb-assembly1.cif.gz_A human transketolase variant t382e 0.9521 1 610
6ha3-assembly1.cif.gz_A human transketolase variant e160q in covalent complex with donor ketose d-fructose-6-phosphate 0.9478 1 610
ID Description Score Start End Superfamily
af_P29401_490_623_3.40.50.920 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9752 479 612 3.40.50.920
af_P29401_490_623_3.40.50.920 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.961 479 612 3.40.50.920
af_Q58092_3_181_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9525 300 474 3.40.50.970
af_Q58094_1_274_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9489 2 267 3.40.50.970
af_Q6PHI8_1_298_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9433 1 286 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A7W1TWF9-F1-model_v4 Transketolase (EC 2.2.1.1) 0.9908 1 611 GO:0000287
GO:0004802
GO:0005737
GO:0030976
AF-A0A7W0PKN7-F1-model_v4 Transketolase (EC 2.2.1.1) 0.9893 1 614 GO:0000287
GO:0004802
GO:0005737
GO:0030976
AF-A0A1I6UUI9-F1-model_v4 Transketolase 0.9878 6 609 GO:0000287
GO:0004802
GO:0005737
GO:0030976
AF-A0A7W1TWF9-F1-model_v4 Transketolase (EC 2.2.1.1) 0.9876 1 611 GO:0000287
GO:0004802
GO:0005737
GO:0030976
AF-A0A2W6CIP1-F1-model_v4 Transketolase 0.9869 2 528 GO:0000287
GO:0004802
GO:0005737
GO:0030976

Map