F359499

General Info

Members Datasets Scaffolds Average Seq Length
247 175 235 559

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8054913762|8054920685
Length 652
Sequence VLGPIQRHPDVSRVTVWVETDLACEVVIAVPSRTVDGGATVDGSGSALGSVGRIAGRARTFEVAGHHYAVVVAGGLVPGEPVAYEVWLMGTAEPAPTSPVRVWPAPGAPPSLLRPVGEDQPVRMVFGSCRVTAPQERPYTLNADDDRQGLGTDALHALALDLPGRDPSTWPGALLLLGDQVYADHVSPRTAERIRARRDVTASPGEEIADFEEYTWLYQEAWSQPEIRWLLSTVPTAMIFDDHDVRDDWNISAAWRVQIRTEPWWDARITGGIMAYWLYQHLGNLSPQERDRDPVHRAVVAAGTPGAASSSSSSDGPDGTDGPGPSAEDLLRAFARRVDAGADRAGADRAGADPDVRSGASASEHGGADLDGPAGADLDGPAGADGVADERAVRWSFRWDLGRTRLVVIDSRAARVVAADGTRAMVDAAEWAWVRDQTDHTGEVDHLLLGTSVPYLLSPLIHNVEAANEQVAAGRWGRRAAAAAERLRQALDLEHWAAFGASFDAMTDLLRAVSAGERGPAPASVVVLSGDVHHAYLARADLSRVGPGNPGVPVWQAVCSPFRNPLGPWVRRVDALSRRAPAAAVSGALARLAGVPRRAIRWRVTDGPWFDSQLAMLELAGRTARLTLSKTEPDGTPGGLTPVLVTDLTPRP

Samples

Sample ID Description Type Environment
1 2508501039 Frankia saprophytica CN3 Isolate Nodule
2 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
3 2619618881 Frankia sp. ACN1ag Isolate Unclassified
4 2619619003 Frankia sp. CpI1-P Isolate Nodule
5 2626541554 Frankia sp. AvcI.1 Isolate Nodule
6 2671180195 Frankia sp. CcI49 Isolate Nodule
7 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
8 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
9 2773857922 Frankia sp. CcI49 Isolate Nodule
10 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
11 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
85 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
93 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
96 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
97 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
98 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
99 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
100 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
101 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
102 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
103 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
104 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
105 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
106 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
107 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
108 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
111 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
112 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
113 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
114 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
115 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
116 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
117 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
118 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
119 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
120 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
121 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
122 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
123 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
126 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
127 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
128 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
129 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
130 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
131 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
148 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
149 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
150 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
151 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
152 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
153 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
154 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
155 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
156 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
157 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
165 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
166 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
167 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
168 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
169 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
170 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
171 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
174 8002775197 Frankia nepalensis CN7 Isolate Nodule
175 8054913762 Frankia gtarii Agncl-10 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.14
Metatranscriptomes 0
Isolates 4.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.81
Nodule 3.24
Rhizoplane 2.02
Rhizosphere 90.28
Stem 0
Stem Tuber 0
Unclassified 3.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10014246 3300003203 Bacteria 3387
2 Ga0070683_100004066 3300005329 Bacteria 11984
3 Ga0070683_100004119 3300005329 Bacteria 11911
4 Ga0070666_10062725 3300005335 Bacteria 2519
5 Ga0070682_100000023 3300005337 Bacteria 206016
6 Ga0068868_100001202 3300005338 Bacteria 17793
7 Ga0070661_100000005 3300005344 Bacteria 220455
8 Ga0070675_100000043 3300005354 Bacteria 77565
9 Ga0070688_100006524 3300005365 Bacteria 6239
10 Ga0070667_100009366 3300005367 Bacteria 8119
11 Ga0070667_100015916 3300005367 Bacteria 6222
12 Ga0070678_100006262 3300005456 Bacteria 6966
13 Ga0070662_100004595 3300005457 Bacteria 8741
14 Ga0070681_10039548 3300005458 Bacteria 4727
15 Ga0070685_10000060 3300005466 Bacteria 63737
16 Ga0070679_100000898 3300005530 Bacteria 25832
17 Ga0070679_100047552 3300005530 Bacteria 4275
18 Ga0068853_100000104 3300005539 Bacteria 56511
19 Ga0070672_100000004 3300005543 Bacteria 129970
20 Ga0070665_100000308 3300005548 Bacteria 76310
21 Ga0070665_100000655 3300005548 Bacteria 46688
22 Ga0068855_100054647 3300005563 Bacteria 4693
23 Ga0070664_100030505 3300005564 Bacteria 4499
24 Ga0068856_100002922 3300005614 Bacteria 17503
25 Ga0068852_100000005 3300005616 Bacteria 173127
26 Ga0068852_100025193 3300005616 Bacteria 4817
27 Ga0068861_100016876 3300005719 Bacteria 5174
28 Ga0068851_10003385 3300005834 Bacteria 7095
29 Ga0068858_100000066 3300005842 Bacteria 108011
30 Ga0068858_100000131 3300005842 Bacteria 77960
31 Ga0068860_100118558 3300005843 Bacteria 2533
32 Ga0068862_100000510 3300005844 Bacteria 41329
33 Ga0081455_10009098 3300005937 Bacteria 10247
34 Ga0081455_10018487 3300005937 Bacteria 6636
35 Ga0081455_10030607 3300005937 Bacteria 4887
36 Ga0081538_10007266 3300005981 Bacteria 9602
37 Ga0081538_10007556 3300005981 Bacteria 9384
38 Ga0081538_10010827 3300005981 Bacteria 7446
39 Ga0081538_10012010 3300005981 Bacteria 6977
40 Ga0081538_10014241 3300005981 Bacteria 6238
41 Ga0081538_10016064 3300005981 Bacteria 5759
42 Ga0081539_10003861 3300005985 Bacteria 17561
43 Ga0070712_100007214 3300006175 Bacteria 6933
44 Ga0075430_100008117 3300006846 Bacteria 8874
45 Ga0075433_10056130 3300006852 Bacteria 3440
46 Ga0075434_100047296 3300006871 Bacteria 4269
47 Ga0075429_100082210 3300006880 Bacteria 2807
48 Ga0111539_10045974 3300009094 Bacteria 5224
49 Ga0105245_10000056 3300009098 Bacteria 124109
50 Ga0105245_10000438 3300009098 Bacteria 38412
51 Ga0105247_10020996 3300009101 Bacteria 3929
52 Ga0114129_10323120 3300009147 Bacteria 2051
53 Ga0105248_10000032 3300009177 Bacteria 201114
54 Ga0105238_10000033 3300009551 Bacteria 172981
55 Ga0105249_10021251 3300009553 Bacteria 5811
56 Ga0105249_10030943 3300009553 Bacteria 4838
57 Ga0157378_10000533 3300013297 Bacteria 36164
58 Ga0157378_10092169 3300013297 Bacteria 2756
59 Ga0157379_10075874 3300014968 Bacteria 3010
60 Ga0207710_10036148 3300025900 Bacteria 2176
61 Ga0207680_10061774 3300025903 Bacteria 2286
62 Ga0207707_10030048 3300025912 Bacteria 4751
63 Ga0207693_10018095 3300025915 Bacteria 5615
64 Ga0207649_10000005 3300025920 Bacteria 356179
65 Ga0207652_10000408 3300025921 Bacteria 44642
66 Ga0207652_10008317 3300025921 Bacteria 8340
67 Ga0207694_10000012 3300025924 Bacteria 411218
68 Ga0207659_10000020 3300025926 Bacteria 151552
69 Ga0207687_10000075 3300025927 Bacteria 71856
70 Ga0207709_10007740 3300025935 Bacteria 5957
71 Ga0207691_10000020 3300025940 Bacteria 133465
72 Ga0207711_10000020 3300025941 Bacteria 363325
73 Ga0207661_10000164 3300025944 Bacteria 43091
74 Ga0207661_10000650 3300025944 Bacteria 22458
75 Ga0207661_10000883 3300025944 Bacteria 19704
76 Ga0207679_10013195 3300025945 Bacteria 5412
77 Ga0207667_10106286 3300025949 Bacteria 2895
78 Ga0207712_10006457 3300025961 Bacteria 7392
79 Ga0207668_10022368 3300025972 Bacteria 4047
80 Ga0207658_10016057 3300025986 Bacteria 5142
81 Ga0207677_10001229 3300026023 Bacteria 13800
82 Ga0207703_10000054 3300026035 Bacteria 143734
83 Ga0207639_10000644 3300026041 Bacteria 24030
84 Ga0207678_10010079 3300026067 Bacteria 8291
85 Ga0207702_10022293 3300026078 Bacteria 5249
86 Ga0207675_100001894 3300026118 Bacteria 20917
87 Ga0207683_10054981 3300026121 Bacteria 3491
88 Ga0207698_10000041 3300026142 Bacteria 97882
89 Ga0207698_10038069 3300026142 Bacteria 3550
90 Ga0207428_10000537 3300027907 Bacteria 45252
91 Ga0268266_10000099 3300028379 Bacteria 182294
92 Ga0268266_10000216 3300028379 Bacteria 100792
93 Ga0268266_10000789 3300028379 Bacteria 42235
94 Ga0268265_10009761 3300028380 Bacteria 6481
95 Ga0268264_10027318 3300028381 Bacteria 4662
96 Ga0307408_100039033 3300031548 Bacteria 3353
97 Ga0307408_100063927 3300031548 Bacteria 2694
98 Ga0307408_100067367 3300031548 Bacteria 2633
99 Ga0307405_10003670 3300031731 Bacteria 7113
100 Ga0307405_10005293 3300031731 Bacteria 6207
101 Ga0307405_10093084 3300031731 Bacteria 2001
102 Ga0307410_10018865 3300031852 Bacteria 4179
103 Ga0307406_10009327 3300031901 Bacteria 5499
104 Ga0307406_10010782 3300031901 Bacteria 5165
105 Ga0307406_10015571 3300031901 Bacteria 4403
106 Ga0307407_10000418 3300031903 Bacteria 12976
107 Ga0307412_10008321 3300031911 Bacteria 5913
108 Ga0307409_100000662 3300031995 Bacteria 15256
109 Ga0307409_100013499 3300031995 Bacteria 5261
110 Ga0307409_100048724 3300031995 Bacteria 3226
111 Ga0307409_100136095 3300031995 Bacteria 2108
112 Ga0307416_100007142 3300032002 Bacteria 7062
113 Ga0307416_100013450 3300032002 Bacteria 5562
114 Ga0307416_100084426 3300032002 Bacteria 2698
115 Ga0307414_10007700 3300032004 Bacteria 6065
116 Ga0307411_10035283 3300032005 Bacteria 3121
117 Ga0307415_100000879 3300032126 Bacteria 13744
118 Ga0307415_100004311 3300032126 Bacteria 7364
119 Ga0307415_100035663 3300032126 Bacteria 3250
120 Ga0439443_000423 3300042003 Bacteria 3655
121 Ga0439448_0000615 3300042005 Bacteria 8385
122 Ga0439448_0003512 3300042005 Bacteria 4345
123 Ga0439450_000732 3300042008 Bacteria 4442
124 Ga0439456_004562 3300042013 Bacteria 2801
125 Ga0439463_000614 3300042016 Bacteria 9913
126 Ga0450904_002783 3300042139 Bacteria 1999
127 Ga0439464_0017079 3300042439 Bacteria 1964
128 Ga0439460_0003949 3300042461 Bacteria 3602
129 Ga0466967_0000045 3300045976 Bacteria 45085
130 Ga0495641_0000040 3300046461 Bacteria 82337
131 Ga0495582_0000182 3300046473 Bacteria 34100
132 Ga0495594_0000032 3300046499 Bacteria 63783
133 Ga0495606_0000057 3300046507 Bacteria 197956
134 Ga0495608_0014061 3300046511 Bacteria 5555
135 Ga0495628_0012383 3300046516 Bacteria 7192
136 Ga0495630_0000025 3300046517 Bacteria 152364
137 Ga0495622_0000050 3300046557 Bacteria 106111
138 Ga0495634_0000026 3300046642 Bacteria 115668
139 Ga0495625_0069095 3300046660 Bacteria 2482
140 Ga0495588_0000294 3300046674 Bacteria 35905
141 Ga0495647_0000719 3300046681 Bacteria 9805
142 Ga0495658_0000004 3300046683 Bacteria 173598
143 Ga0495624_0000241 3300046690 Bacteria 42989
144 Ga0495649_0000320 3300046694 Bacteria 41735
145 Ga0495680_0000617 3300047322 Bacteria 40072
146 Ga0495680_0064884 3300047322 Bacteria 2799
147 Ga0495679_008254 3300047446 Bacteria 4250
148 Ga0496102_0008626 3300048905 Bacteria 8746
149 Ga0496104_0003619 3300048907 Bacteria 13353
150 Ga0496108_0000133 3300048911 Bacteria 72253
151 Ga0496108_0006425 3300048911 Bacteria 9531
152 Ga0496109_0000039 3300048912 Bacteria 145769
153 Ga0496117_0002869 3300048920 Bacteria 20949
154 Ga0496118_0001180 3300048921 Bacteria 40327
155 Ga0496119_0005054 3300048922 Bacteria 12823
156 Ga0496120_0027589 3300048923 Bacteria 3489
157 Ga0496121_0064043 3300048924 Bacteria 3000
158 Ga0496126_0029651 3300048929 Bacteria 5195
159 Ga0501031_0002276 3300049568 Bacteria 12166
160 Ga0501031_0004275 3300049568 Bacteria 9232
161 Ga0501032_0000295 3300049569 Bacteria 41934
162 Ga0501033_0000333 3300049570 Bacteria 44939
163 Ga0501034_0001537 3300049571 Bacteria 30289
164 Ga0501034_0063776 3300049571 Bacteria 3698
165 Ga0501036_0000155 3300049572 Bacteria 45175
166 Ga0501036_0003421 3300049572 Bacteria 12681
167 Ga0501037_0000367 3300049573 Bacteria 37644
168 Ga0501038_0000448 3300049574 Bacteria 35919
169 Ga0501038_0007977 3300049574 Bacteria 9755
170 Ga0501038_0024624 3300049574 Bacteria 5368
171 Ga0501039_0001879 3300049575 Bacteria 15525
172 Ga0501039_0019322 3300049575 Bacteria 5223
173 Ga0501039_0154871 3300049575 Bacteria 1800
174 Ga0501040_0004873 3300049576 Bacteria 8686
175 Ga0501040_0008769 3300049576 Bacteria 6569
176 Ga0501041_0001259 3300049577 Bacteria 13910
177 Ga0501041_0006561 3300049577 Bacteria 6812
178 Ga0501041_0062375 3300049577 Unclassified 2282
179 Ga0501042_0001225 3300049578 Bacteria 14917
180 Ga0501042_0029330 3300049578 Bacteria 3879
181 Ga0501043_0002447 3300049579 Bacteria 15713
182 Ga0501046_0000431 3300049580 Bacteria 41996
183 Ga0501046_0005630 3300049580 Bacteria 11183
184 Ga0501047_0000282 3300049581 Bacteria 58695
185 Ga0501048_0000239 3300049582 Bacteria 36456
186 Ga0501048_0012877 3300049582 Bacteria 6212
187 Ga0501070_0000412 3300049586 Bacteria 38955
188 Ga0501070_0004698 3300049586 Bacteria 11700
189 Ga0501071_0004251 3300049587 Bacteria 9072
190 Ga0501071_0005537 3300049587 Bacteria 8133
191 Ga0501072_0000418 3300049588 Bacteria 30385
192 Ga0501072_0012419 3300049588 Bacteria 6507
193 Ga0501073_0000318 3300049589 Bacteria 32067
194 Ga0501073_0043137 3300049589 Bacteria 3181
195 Ga0501074_0006554 3300049590 Bacteria 8414
196 Ga0501074_0013202 3300049590 Bacteria 6006
197 Ga0501074_0038458 3300049590 Bacteria 3467
198 Ga0501075_0001146 3300049591 Bacteria 17104
199 Ga0501075_0003481 3300049591 Bacteria 10530
200 Ga0501076_0000720 3300049592 Bacteria 21369
201 Ga0501077_0001006 3300049593 Bacteria 17008
202 Ga0501077_0004040 3300049593 Bacteria 8857
203 Ga0501079_0002845 3300049741 Bacteria 12619
204 Ga0501079_0003476 3300049741 Bacteria 11578
205 Ga0501079_0009263 3300049741 Bacteria 7460
206 Ga0501080_0018563 3300049742 Bacteria 6436
207 Ga0501081_0001418 3300049743 Bacteria 14655
208 Ga0501081_0002362 3300049743 Bacteria 11890
209 Ga0501083_0006532 3300049744 Bacteria 8271
210 Ga0501083_0093562 3300049744 Bacteria 1984
211 Ga0501035_0000252 3300049822 Bacteria 64415
212 Ga0501035_0008938 3300049822 Bacteria 9323
213 Ga0501035_0027939 3300049822 Bacteria 5154
214 Ga0501044_0000168 3300049823 Bacteria 80703
215 Ga0501044_0041252 3300049823 Bacteria 4805
216 Ga0501045_0002139 3300049824 Bacteria 13355
217 Ga0501045_0024482 3300049824 Bacteria 4335
218 Ga0501045_0085610 3300049824 Bacteria 2326
219 nmdc:mga05p37_18247_c1 3300050507 Bacteria 8477
220 nmdc:mga09592_94731_c1 3300050508 Bacteria 2554
221 nmdc:mga0n895_23319_c1 3300050512 Bacteria 5815
222 nmdc:mga0a205_125_c2 3300050515 Bacteria 7254
223 nmdc:mga0a205_5996_c2 3300050515 Bacteria 7213
224 Ga0495601_0000022 3300053077 Bacteria 148418
225 Ga0495612_0002584 3300053078 Bacteria 7467
226 Ga0495655_0000977 3300053083 Bacteria 4430
227 Ga0500614_000359 3300053123 Bacteria 11912
228 Ga0500616_0010251 3300053153 Bacteria 5619
229 Ga0501084_0002240 3300054114 Bacteria 15528
230 Ga0590075_015508 3300059424 Bacteria 1870
231 Ga0501082_0004579 3300060353 Bacteria 12075
232 Ga0501082_0008304 3300060353 Bacteria 8956
233 Ga0501082_0009931 3300060353 Bacteria 8207
234 Ga0530510_0000039 3300061734 Bacteria 60006
235 Ga0530510_0017779 3300061734 Bacteria 5040

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048929 Ga0496126_0029651 Ga0496126_0029651_3277_4920 518
2 3300049571 Ga0501034_0063776 Ga0501034_0063776_1381_3024 527
3 3300049744 Ga0501083_0093562 Ga0501083_0093562_89_1732 527
4 3300049823 Ga0501044_0041252 Ga0501044_0041252_101_1744 527
5 3300048923 Ga0496120_0027589 Ga0496120_0027589_88_1731 529
6 3300005456 Ga0070678_100006262 Ga0070678_1000062624 531
7 3300047322 Ga0495680_0064884 Ga0495680_0064884_551_2191 531
8 3300005548 Ga0070665_100000655 Ga0070665_10000065515 532
9 3300005834 Ga0068851_10003385 Ga0068851_100033854 532
10 3300013297 Ga0157378_10092169 Ga0157378_100921693 532
11 3300026121 Ga0207683_10054981 Ga0207683_100549811 532
12 3300028379 Ga0268266_10000789 Ga0268266_100007898 532
13 3300046473 Ga0495582_0000182 Ga0495582_0000182_1921_3546 532
14 3300046507 Ga0495606_0000057 Ga0495606_0000057_14069_15724 532
15 3300046674 Ga0495588_0000294 Ga0495588_0000294_12475_14127 532
16 3300046683 Ga0495658_0000004 Ga0495658_0000004_170057_171682 532
17 3300047446 Ga0495679_008254 Ga0495679_008254_1460_3103 532
18 3300009101 Ga0105247_10020996 Ga0105247_100209962 533
19 3300025900 Ga0207710_10036148 Ga0207710_100361482 533
20 3300046517 Ga0495630_0000025 Ga0495630_0000025_59151_60806 533
21 3300046681 Ga0495647_0000719 Ga0495647_0000719_2301_3956 533
22 3300046690 Ga0495624_0000241 Ga0495624_0000241_14855_16510 533
23 3300005338 Ga0068868_100001202 Ga0068868_1000012026 534
24 3300005937 Ga0081455_10018487 Ga0081455_100184874 534
25 3300026023 Ga0207677_10001229 Ga0207677_100012299 534
26 iso_pu_bacteria 2671180195 2671838166 536
27 iso_pu_bacteria 2773857922 2774856322 536
28 iso_pu_bacteria 8002775197 8002776872 536
29 iso_pu_bacteria 8054913762 8054920685 538
30 iso_pu_bacteria 2508501039 2508673801 539
31 iso_pu_bacteria 2579778521 2579853455 539
32 iso_pu_bacteria 2619618881 2619857975 539
33 iso_pu_bacteria 2619619003 2620349113 539
34 iso_pu_bacteria 2684623035 2686540165 540
35 iso_pu_bacteria 2895880812 2895885433 540
36 3300005563 Ga0068855_100054647 Ga0068855_1000546472 541
37 3300005843 Ga0068860_100118558 Ga0068860_1001185582 541
38 3300005937 Ga0081455_10009098 Ga0081455_100090987 541
39 3300025949 Ga0207667_10106286 Ga0207667_101062862 541
40 3300046499 Ga0495594_0000032 Ga0495594_0000032_39901_41538 541
41 3300005335 Ga0070666_10062725 Ga0070666_100627252 542
42 3300005367 Ga0070667_100009366 Ga0070667_1000093667 542
43 3300005367 Ga0070667_100015916 Ga0070667_1000159165 542
44 3300005466 Ga0070685_10000060 Ga0070685_1000006047 542
45 3300005530 Ga0070679_100047552 Ga0070679_1000475521 542
46 3300005844 Ga0068862_100000510 Ga0068862_10000051025 542
47 3300009553 Ga0105249_10030943 Ga0105249_100309434 542
48 3300014968 Ga0157379_10075874 Ga0157379_100758742 542
49 3300025903 Ga0207680_10061774 Ga0207680_100617742 542
50 3300025921 Ga0207652_10008317 Ga0207652_100083171 542
51 3300025961 Ga0207712_10006457 Ga0207712_100064576 542
52 3300025986 Ga0207658_10016057 Ga0207658_100160572 542
53 3300026067 Ga0207678_10010079 Ga0207678_100100791 542
54 3300028379 Ga0268266_10000216 Ga0268266_1000021629 542
55 3300028380 Ga0268265_10009761 Ga0268265_100097617 542
56 3300028381 Ga0268264_10027318 Ga0268264_100273183 542
57 3300045976 Ga0466967_0000045 Ga0466967_0000045_20728_22368 542
58 3300046557 Ga0495622_0000050 Ga0495622_0000050_18727_20367 542
59 3300046660 Ga0495625_0069095 Ga0495625_0069095_121_1785 542
60 3300048905 Ga0496102_0008626 Ga0496102_0008626_7061_8704 542
61 3300048907 Ga0496104_0003619 Ga0496104_0003619_5225_6868 542
62 3300048920 Ga0496117_0002869 Ga0496117_0002869_12053_13696 542
63 3300048921 Ga0496118_0001180 Ga0496118_0001180_14002_15645 542
64 3300048922 Ga0496119_0005054 Ga0496119_0005054_8349_9992 542
65 3300048924 Ga0496121_0064043 Ga0496121_0064043_128_1771 542
66 3300049568 Ga0501031_0002276 Ga0501031_0002276_7036_8679 542
67 3300049569 Ga0501032_0000295 Ga0501032_0000295_13483_15126 542
68 3300049570 Ga0501033_0000333 Ga0501033_0000333_35454_37097 542
69 3300049571 Ga0501034_0001537 Ga0501034_0001537_1900_3543 542
70 3300049572 Ga0501036_0000155 Ga0501036_0000155_16845_18488 542
71 3300049573 Ga0501037_0000367 Ga0501037_0000367_7463_9106 542
72 3300049574 Ga0501038_0000448 Ga0501038_0000448_26869_28512 542
73 3300049575 Ga0501039_0154871 Ga0501039_0154871_133_1776 542
74 3300049579 Ga0501043_0002447 Ga0501043_0002447_6296_7939 542
75 3300049580 Ga0501046_0000431 Ga0501046_0000431_26802_28445 542
76 3300049581 Ga0501047_0000282 Ga0501047_0000282_40204_41847 542
77 3300049582 Ga0501048_0000239 Ga0501048_0000239_8040_9683 542
78 3300049586 Ga0501070_0000412 Ga0501070_0000412_10484_12127 542
79 3300049586 Ga0501070_0004698 Ga0501070_0004698_10005_11648 542
80 3300049589 Ga0501073_0000318 Ga0501073_0000318_22952_24595 542
81 3300049590 Ga0501074_0006554 Ga0501074_0006554_3754_5397 542
82 3300049741 Ga0501079_0003476 Ga0501079_0003476_7240_8883 542
83 3300049742 Ga0501080_0018563 Ga0501080_0018563_3491_5134 542
84 3300049744 Ga0501083_0006532 Ga0501083_0006532_62_1705 542
85 3300049822 Ga0501035_0000252 Ga0501035_0000252_16870_18513 542
86 3300049823 Ga0501044_0000168 Ga0501044_0000168_45903_47546 542
87 3300049824 Ga0501045_0024482 Ga0501045_0024482_2632_4275 542
88 3300053153 Ga0500616_0010251 Ga0500616_0010251_3159_4808 542
89 3300060353 Ga0501082_0008304 Ga0501082_0008304_1000_2643 542
90 3300005329 Ga0070683_100004066 Ga0070683_1000040669 543
91 3300005329 Ga0070683_100004119 Ga0070683_10000411914 543
92 3300005337 Ga0070682_100000023 Ga0070682_10000002358 543
93 3300005344 Ga0070661_100000005 Ga0070661_100000005138 543
94 3300005354 Ga0070675_100000043 Ga0070675_10000004334 543
95 3300005365 Ga0070688_100006524 Ga0070688_1000065244 543
96 3300005458 Ga0070681_10039548 Ga0070681_100395485 543
97 3300005530 Ga0070679_100000898 Ga0070679_10000089824 543
98 3300005539 Ga0068853_100000104 Ga0068853_10000010429 543
99 3300005543 Ga0070672_100000004 Ga0070672_10000000425 543
100 3300005548 Ga0070665_100000308 Ga0070665_10000030842 543
101 3300005564 Ga0070664_100030505 Ga0070664_1000305052 543
102 3300005614 Ga0068856_100002922 Ga0068856_10000292217 543
103 3300005616 Ga0068852_100000005 Ga0068852_10000000518 543
104 3300005616 Ga0068852_100025193 Ga0068852_1000251934 543
105 3300005842 Ga0068858_100000066 Ga0068858_10000006644 543
106 3300005842 Ga0068858_100000131 Ga0068858_10000013165 543
107 3300006175 Ga0070712_100007214 Ga0070712_1000072143 543
108 3300006852 Ga0075433_10056130 Ga0075433_100561302 543
109 3300009098 Ga0105245_10000056 Ga0105245_1000005677 543
110 3300009098 Ga0105245_10000438 Ga0105245_1000043837 543
111 3300009177 Ga0105248_10000032 Ga0105248_1000003247 543
112 3300009551 Ga0105238_10000033 Ga0105238_1000003351 543
113 3300013297 Ga0157378_10000533 Ga0157378_1000053333 543
114 3300025912 Ga0207707_10030048 Ga0207707_100300483 543
115 3300025915 Ga0207693_10018095 Ga0207693_100180953 543
116 3300025920 Ga0207649_10000005 Ga0207649_10000005281 543
117 3300025921 Ga0207652_10000408 Ga0207652_1000040822 543
118 3300025924 Ga0207694_10000012 Ga0207694_1000001251 543
119 3300025926 Ga0207659_10000020 Ga0207659_10000020137 543
120 3300025927 Ga0207687_10000075 Ga0207687_1000007537 543
121 3300025935 Ga0207709_10007740 Ga0207709_100077404 543
122 3300025940 Ga0207691_10000020 Ga0207691_10000020100 543
123 3300025941 Ga0207711_10000020 Ga0207711_10000020327 543
124 3300025944 Ga0207661_10000164 Ga0207661_100001647 543
125 3300025944 Ga0207661_10000650 Ga0207661_1000065022 543
126 3300025944 Ga0207661_10000883 Ga0207661_1000088314 543
127 3300025945 Ga0207679_10013195 Ga0207679_100131952 543
128 3300026035 Ga0207703_10000054 Ga0207703_1000005443 543
129 3300026041 Ga0207639_10000644 Ga0207639_1000064424 543
130 3300026078 Ga0207702_10022293 Ga0207702_100222934 543
131 3300026142 Ga0207698_10000041 Ga0207698_1000004146 543
132 3300026142 Ga0207698_10038069 Ga0207698_100380692 543
133 3300028379 Ga0268266_10000099 Ga0268266_1000009944 543
134 3300046461 Ga0495641_0000040 Ga0495641_0000040_19545_21188 543
135 3300046511 Ga0495608_0014061 Ga0495608_0014061_140_1783 543
136 3300046516 Ga0495628_0012383 Ga0495628_0012383_3385_5028 543
137 3300046642 Ga0495634_0000026 Ga0495634_0000026_78466_80109 543
138 3300046694 Ga0495649_0000320 Ga0495649_0000320_2173_3816 543
139 3300047322 Ga0495680_0000617 Ga0495680_0000617_19016_20659 543
140 3300048911 Ga0496108_0000133 Ga0496108_0000133_33873_35543 543
141 3300048911 Ga0496108_0006425 Ga0496108_0006425_6327_7985 543
142 3300048912 Ga0496109_0000039 Ga0496109_0000039_9627_11285 543
143 3300050515 nmdc:mga0a205_125_c2 nmdc:mga0a205_125_c2_4310_5953 543
144 3300053077 Ga0495601_0000022 Ga0495601_0000022_38743_40386 543
145 3300053078 Ga0495612_0002584 Ga0495612_0002584_345_1988 543
146 3300053083 Ga0495655_0000977 Ga0495655_0000977_856_2511 543
147 3300053123 Ga0500614_000359 Ga0500614_000359_2624_4267 543
148 iso_pu_bacteria 2626541554 2626637145 544
149 3300032002 Ga0307416_100013450 Ga0307416_1000134505 545
150 3300032126 Ga0307415_100004311 Ga0307415_1000043115 545
151 3300031548 Ga0307408_100067367 Ga0307408_1000673672 546
152 3300031731 Ga0307405_10003670 Ga0307405_100036706 546
153 3300031901 Ga0307406_10009327 Ga0307406_100093273 546
154 3300031903 Ga0307407_10000418 Ga0307407_100004189 546
155 3300031995 Ga0307409_100000662 Ga0307409_10000066214 546
156 3300032126 Ga0307415_100000879 Ga0307415_1000008793 546
157 3300049577 Ga0501041_0062375 Ga0501041_0062375_321_1976 546
158 iso_pu_bacteria 2687453743 2689993165 546
159 3300005981 Ga0081538_10010827 Ga0081538_100108276 551
160 3300006871 Ga0075434_100047296 Ga0075434_1000472963 554
161 3300050512 nmdc:mga0n895_23319_c1 nmdc:mga0n895_23319_c1_300_2096 554
162 3300042139 Ga0450904_002783 Ga0450904_002783_219_1910 555
163 3300042003 Ga0439443_000423 Ga0439443_000423_1495_3189 556
164 3300042005 Ga0439448_0000615 Ga0439448_0000615_3426_5120 556
165 3300042008 Ga0439450_000732 Ga0439450_000732_1322_3016 556
166 3300042016 Ga0439463_000614 Ga0439463_000614_4733_6427 556
167 3300042461 Ga0439460_0003949 Ga0439460_0003949_42_1736 556
168 3300005457 Ga0070662_100004595 Ga0070662_1000045952 558
169 3300005719 Ga0068861_100016876 Ga0068861_1000168763 558
170 3300005981 Ga0081538_10012010 Ga0081538_100120105 558
171 3300009147 Ga0114129_10323120 Ga0114129_103231202 558
172 3300009553 Ga0105249_10021251 Ga0105249_100212515 558
173 3300025972 Ga0207668_10022368 Ga0207668_100223682 558
174 3300026118 Ga0207675_100001894 Ga0207675_1000018946 558
175 3300031548 Ga0307408_100039033 Ga0307408_1000390332 558
176 3300031548 Ga0307408_100063927 Ga0307408_1000639272 558
177 3300031731 Ga0307405_10005293 Ga0307405_100052935 558
178 3300031852 Ga0307410_10018865 Ga0307410_100188652 558
179 3300031901 Ga0307406_10010782 Ga0307406_100107822 558
180 3300031901 Ga0307406_10015571 Ga0307406_100155712 558
181 3300031911 Ga0307412_10008321 Ga0307412_100083215 558
182 3300031995 Ga0307409_100013499 Ga0307409_1000134993 558
183 3300031995 Ga0307409_100048724 Ga0307409_1000487242 558
184 3300032002 Ga0307416_100007142 Ga0307416_1000071422 558
185 3300032002 Ga0307416_100084426 Ga0307416_1000844263 558
186 3300032004 Ga0307414_10007700 Ga0307414_100077004 558
187 3300032005 Ga0307411_10035283 Ga0307411_100352832 558
188 3300032126 Ga0307415_100035663 Ga0307415_1000356632 558
189 3300042439 Ga0439464_0017079 Ga0439464_0017079_227_1921 558
190 3300005937 Ga0081455_10030607 Ga0081455_100306073 559
191 3300006846 Ga0075430_100008117 Ga0075430_1000081173 559
192 3300006880 Ga0075429_100082210 Ga0075429_1000822102 559
193 3300009094 Ga0111539_10045974 Ga0111539_100459742 559
194 3300027907 Ga0207428_10000537 Ga0207428_1000053712 559
195 3300042005 Ga0439448_0003512 Ga0439448_0003512_1553_3268 559
196 3300049568 Ga0501031_0004275 Ga0501031_0004275_5043_6758 559
197 3300049572 Ga0501036_0003421 Ga0501036_0003421_5383_7098 559
198 3300049574 Ga0501038_0007977 Ga0501038_0007977_3247_4962 559
199 3300049575 Ga0501039_0001879 Ga0501039_0001879_7443_9158 559
200 3300049576 Ga0501040_0004873 Ga0501040_0004873_5607_7322 559
201 3300049577 Ga0501041_0001259 Ga0501041_0001259_5435_7150 559
202 3300049578 Ga0501042_0001225 Ga0501042_0001225_7623_9338 559
203 3300049587 Ga0501071_0004251 Ga0501071_0004251_4466_6181 559
204 3300049588 Ga0501072_0000418 Ga0501072_0000418_22296_24011 559
205 3300049589 Ga0501073_0043137 Ga0501073_0043137_1365_3080 559
206 3300049590 Ga0501074_0038458 Ga0501074_0038458_1336_3051 559
207 3300049591 Ga0501075_0001146 Ga0501075_0001146_9064_10779 559
208 3300049592 Ga0501076_0000720 Ga0501076_0000720_12366_14081 559
209 3300049593 Ga0501077_0001006 Ga0501077_0001006_9129_10844 559
210 3300049741 Ga0501079_0002845 Ga0501079_0002845_4634_6349 559
211 3300049743 Ga0501081_0002362 Ga0501081_0002362_5541_7256 559
212 3300049822 Ga0501035_0027939 Ga0501035_0027939_922_2637 559
213 3300049824 Ga0501045_0002139 Ga0501045_0002139_5293_7008 559
214 3300050507 nmdc:mga05p37_18247_c1 nmdc:mga05p37_18247_c1_250_1965 559
215 3300050508 nmdc:mga09592_94731_c1 nmdc:mga09592_94731_c1_122_1837 559
216 3300050515 nmdc:mga0a205_5996_c2 nmdc:mga0a205_5996_c2_2384_4099 559
217 3300054114 Ga0501084_0002240 Ga0501084_0002240_7452_9167 559
218 3300060353 Ga0501082_0009931 Ga0501082_0009931_187_1902 559
219 3300061734 Ga0530510_0000039 Ga0530510_0000039_6252_7967 559
220 3300031731 Ga0307405_10093084 Ga0307405_100930841 560
221 3300031995 Ga0307409_100136095 Ga0307409_1001360951 560
222 3300049574 Ga0501038_0024624 Ga0501038_0024624_1222_2940 560
223 3300049575 Ga0501039_0019322 Ga0501039_0019322_3315_5033 560
224 3300049576 Ga0501040_0008769 Ga0501040_0008769_4097_5815 560
225 3300049577 Ga0501041_0006561 Ga0501041_0006561_4121_5839 560
226 3300049578 Ga0501042_0029330 Ga0501042_0029330_1473_3191 560
227 3300049580 Ga0501046_0005630 Ga0501046_0005630_7444_9162 560
228 3300049582 Ga0501048_0012877 Ga0501048_0012877_402_2120 560
229 3300049587 Ga0501071_0005537 Ga0501071_0005537_4024_5742 560
230 3300049588 Ga0501072_0012419 Ga0501072_0012419_227_1945 560
231 3300049590 Ga0501074_0013202 Ga0501074_0013202_1010_2728 560
232 3300049591 Ga0501075_0003481 Ga0501075_0003481_4859_6577 560
233 3300049593 Ga0501077_0004040 Ga0501077_0004040_3149_4867 560
234 3300049741 Ga0501079_0009263 Ga0501079_0009263_4093_5811 560
235 3300049743 Ga0501081_0001418 Ga0501081_0001418_3355_5073 560
236 3300049822 Ga0501035_0008938 Ga0501035_0008938_3525_5243 560
237 3300049824 Ga0501045_0085610 Ga0501045_0085610_130_1848 560
238 3300060353 Ga0501082_0004579 Ga0501082_0004579_4108_5826 560
239 3300061734 Ga0530510_0017779 Ga0530510_0017779_2869_4587 560
240 3300059424 Ga0590075_015508 Ga0590075_015508_94_1842 563
241 3300005981 Ga0081538_10016064 Ga0081538_100160642 567
242 3300005981 Ga0081538_10007266 Ga0081538_100072662 568
243 3300042013 Ga0439456_004562 Ga0439456_004562_326_2089 569
244 3300005981 Ga0081538_10014241 Ga0081538_100142415 571
245 3300005981 Ga0081538_10007556 Ga0081538_100075565 573
246 3300003203 JGI25406J46586_10014246 JGI25406J46586_100142462 574
247 3300005985 Ga0081539_10003861 Ga0081539_1000386114 574

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09423

PhoD

PhoD-like phosphatase

168

301

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
7r5j-assembly1.cif.gz_R0 human nuclear pore complex (dilated) 0.8209 518 557
7fik-assembly1.cif.gz_e the cryo-em structure of the cr subunit from x. laevis npc 0.7665 518 557
7fik-assembly1.cif.gz_E the cryo-em structure of the cr subunit from x. laevis npc 0.7648 518 557
7tdz-assembly1.cif.gz_a cryo-em model of protomer of the cytoplasmic ring of the nuclear pore complex from xenopus laevis 0.7578 518 555
7wb4-assembly1.cif.gz_e cryo-em structure of the nr subunit from x. laevis npc 0.7531 518 553
ID Description Score Start End Superfamily
af_Q9Z0W3_28_543_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8135 518 557 2.130.10.10
af_D3ZBL6_28_424_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7868 518 557 2.130.10.10
af_A0A5K1K8Q0_147_319_2.60.120.560 Mainly Beta;Sandwich;Jelly Rolls;Exo-inulinase; domain 1 0.6977 518 558 2.60.120.560
af_A0A1D8PIX3_56_336_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.6975 516 557 2.130.10.10
2yeqA02 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Alkaline phosphatase D (PhoD) 0.6572 98 557 3.60.21.70
ID Description Score Start End GO Terms
AF-A0A4R1BRR6-F1-model_v4 Alkaline phosphatase family protein 0.9655 1 558
AF-A0A4R1BRR6-F1-model_v4 Alkaline phosphatase family protein 0.9638 1 558
AF-A0A838I9C8-F1-model_v4 Alkaline phosphatase family protein 0.9604 140 557
AF-A0A7W0RGQ4-F1-model_v4 Alkaline phosphatase family protein 0.9585 97 557
AF-A0A7W0UE30-F1-model_v4 Alkaline phosphatase family protein 0.9582 1 441

Feature Viewer

pLDDT pTM Quality
86.66 0.9 High
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Predicted Structure (AlphaFold2)

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